GKLOMLI: a link prediction model for inferring miRNA–lncRNA interactions by using Gaussian kernel-based method on network profile and linear optimization algorithm - Wong, Leon; Wang, Lei; You, Zhu-Hong; Yuan, Chang-An; Huang, Yu-An; Cao, Mei-Yuan (BMC bioinformatics, 2023)
Keywords: Algorithms; Analysis; Bioaccumulation; Cell cycle; Competing endogenous RNA (ceRNA); Computational biology; Crosslinked polymers; Crosslinking; Experiments; Gaussian kernel; Gene expression; Health aspects; Humans; Immunoprecipitation; Kernels; Link prediction; Mathematical analysis; Mathematical optimization; Methods; MicroRNA; MicroRNAs; MicroRNAs - genetics; miRNA; miRNA–lncRNA interaction; Network analysis; Next-generation sequencing; Non-coding RNA; Optimization; Performance evaluation; Prediction models; Principles; Regulatory mechanisms (biology); Reproducibility of Results; Research Design; RNA, Long Noncoding - genetics; Similarity; Software; China; Link prediction; miRNA–lncRNA interaction; Gaussian kernel; Competing endogenous RNA (ceRNA); Computational biology