Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and...

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Published inBMC genomics Vol. 22; no. 1; p. 300
Main Authors Chen, Zhiwei, Zhou, Longhua, Jiang, Panpan, Lu, Ruiju, Halford, Nigel G, Liu, Chenghong
Format Journal Article
LanguageEnglish
Published England BioMed Central Ltd 26.04.2021
BioMed Central
BMC
Subjects
Abscisic acid
Abscisic Acid - pharmacology
Adenosine diphosphate
Analysis
Barley
Cloning
Crosstalk
Development strategies
Divergence
Enzymes
Gene expression
Gene Expression Regulation, Plant
Gene family
Genes
Genetic aspects
Genomes
Genomics
Glucose
Hardiness
Hordeum - genetics
Hordeum - metabolism
Hordeum vulgare
Identification and classification
Kinases
Metabolism
Methyl jasmonate
Phosphorylation
Phylogeny
Physiological aspects
Plant Breeding
Plant Proteins - genetics
Plant Proteins - metabolism
Plants
Protein kinase
Protein kinases
Proteins
Regulatory sequences
Ribonucleic acid
Rice
RNA
RNA sequencing
RNA-Seq
SnRK
Sorghum
Sucrose
Sucrose nonfermenting-1
Transcription factors
China
Barley
SnRK
Hordeum vulgare
Abscisic acid
Metabolic regulation
Stress responses
Gene family
Sucrose nonfermenting-1
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Abstract Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and divergence of the plant gene family has led to the evolution of three subfamilies, SnRK1, SnRK2 and SnRK3, of which SnRK2 and SnRK3 are unique to plants. Therefore, the study of SnRKs in crops may lead to the development of strategies for breeding crop varieties that are more resilient under stress conditions. In the present study, we describe the SnRK gene family of barley (Hordeum vulgare), the widespread cultivation of which can be attributed to its good adaptation to different environments. The barley HvSnRK gene family was elucidated in its entirety from publicly-available genome data and found to comprise 50 genes. Phylogenetic analyses assigned six of the genes to the HvSnRK1 subfamily, 10 to HvSnRK2 and 34 to HvSnRK3. The search was validated by applying it to Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa) genome data, identifying 50 SnRK genes in rice (four OsSnRK1, 11 OsSnRK2 and 35 OsSnRK3) and 39 in Arabidopsis (three AtSnRK1, 10 AtSnRK2 and 26 AtSnRK3). Specific motifs were identified in the encoded barley proteins, and multiple putative regulatory elements were found in the gene promoters, with light-regulated elements (LRE), ABA response elements (ABRE) and methyl jasmonate response elements (MeJa) the most common. RNA-seq analysis showed that many of the HvSnRK genes responded to ABA, some positively, some negatively and some with complex time-dependent responses. The barley HvSnRK gene family is large, comprising 50 members, subdivided into HvSnRK1 (6 members), HvSnRK2 (10 members) and HvSnRK3 (34 members), showing differential positive and negative responses to ABA.
AbstractList Background Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and divergence of the plant gene family has led to the evolution of three subfamilies, SnRK1, SnRK2 and SnRK3, of which SnRK2 and SnRK3 are unique to plants. Therefore, the study of SnRKs in crops may lead to the development of strategies for breeding crop varieties that are more resilient under stress conditions. In the present study, we describe the SnRK gene family of barley (Hordeum vulgare), the widespread cultivation of which can be attributed to its good adaptation to different environments. Results The barley HvSnRK gene family was elucidated in its entirety from publicly-available genome data and found to comprise 50 genes. Phylogenetic analyses assigned six of the genes to the HvSnRK1 subfamily, 10 to HvSnRK2 and 34 to HvSnRK3. The search was validated by applying it to Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa) genome data, identifying 50 SnRK genes in rice (four OsSnRK1, 11 OsSnRK2 and 35 OsSnRK3) and 39 in Arabidopsis (three AtSnRK1, 10 AtSnRK2 and 26 AtSnRK3). Specific motifs were identified in the encoded barley proteins, and multiple putative regulatory elements were found in the gene promoters, with light-regulated elements (LRE), ABA response elements (ABRE) and methyl jasmonate response elements (MeJa) the most common. RNA-seq analysis showed that many of the HvSnRK genes responded to ABA, some positively, some negatively and some with complex time-dependent responses. Conclusions The barley HvSnRK gene family is large, comprising 50 members, subdivided into HvSnRK1 (6 members), HvSnRK2 (10 members) and HvSnRK3 (34 members), showing differential positive and negative responses to ABA. Keywords: Barley, Hordeum vulgare, SnRK, Sucrose nonfermenting-1, Gene family, Abscisic acid, Metabolic regulation, Stress responses
Abstract Background Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and divergence of the plant gene family has led to the evolution of three subfamilies, SnRK1, SnRK2 and SnRK3, of which SnRK2 and SnRK3 are unique to plants. Therefore, the study of SnRKs in crops may lead to the development of strategies for breeding crop varieties that are more resilient under stress conditions. In the present study, we describe the SnRK gene family of barley (Hordeum vulgare), the widespread cultivation of which can be attributed to its good adaptation to different environments. Results The barley HvSnRK gene family was elucidated in its entirety from publicly-available genome data and found to comprise 50 genes. Phylogenetic analyses assigned six of the genes to the HvSnRK1 subfamily, 10 to HvSnRK2 and 34 to HvSnRK3. The search was validated by applying it to Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa) genome data, identifying 50 SnRK genes in rice (four OsSnRK1, 11 OsSnRK2 and 35 OsSnRK3) and 39 in Arabidopsis (three AtSnRK1, 10 AtSnRK2 and 26 AtSnRK3). Specific motifs were identified in the encoded barley proteins, and multiple putative regulatory elements were found in the gene promoters, with light-regulated elements (LRE), ABA response elements (ABRE) and methyl jasmonate response elements (MeJa) the most common. RNA-seq analysis showed that many of the HvSnRK genes responded to ABA, some positively, some negatively and some with complex time-dependent responses. Conclusions The barley HvSnRK gene family is large, comprising 50 members, subdivided into HvSnRK1 (6 members), HvSnRK2 (10 members) and HvSnRK3 (34 members), showing differential positive and negative responses to ABA.
Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and divergence of the plant gene family has led to the evolution of three subfamilies, SnRK1, SnRK2 and SnRK3, of which SnRK2 and SnRK3 are unique to plants. Therefore, the study of SnRKs in crops may lead to the development of strategies for breeding crop varieties that are more resilient under stress conditions. In the present study, we describe the SnRK gene family of barley (Hordeum vulgare), the widespread cultivation of which can be attributed to its good adaptation to different environments. The barley HvSnRK gene family was elucidated in its entirety from publicly-available genome data and found to comprise 50 genes. Phylogenetic analyses assigned six of the genes to the HvSnRK1 subfamily, 10 to HvSnRK2 and 34 to HvSnRK3. The search was validated by applying it to Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa) genome data, identifying 50 SnRK genes in rice (four OsSnRK1, 11 OsSnRK2 and 35 OsSnRK3) and 39 in Arabidopsis (three AtSnRK1, 10 AtSnRK2 and 26 AtSnRK3). Specific motifs were identified in the encoded barley proteins, and multiple putative regulatory elements were found in the gene promoters, with light-regulated elements (LRE), ABA response elements (ABRE) and methyl jasmonate response elements (MeJa) the most common. RNA-seq analysis showed that many of the HvSnRK genes responded to ABA, some positively, some negatively and some with complex time-dependent responses. The barley HvSnRK gene family is large, comprising 50 members, subdivided into HvSnRK1 (6 members), HvSnRK2 (10 members) and HvSnRK3 (34 members), showing differential positive and negative responses to ABA.
Abstract Background Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and divergence of the plant gene family has led to the evolution of three subfamilies, SnRK1 , SnRK2 and SnRK3 , of which SnRK2 and SnRK3 are unique to plants. Therefore, the study of SnRKs in crops may lead to the development of strategies for breeding crop varieties that are more resilient under stress conditions. In the present study, we describe the SnRK gene family of barley ( Hordeum vulgare ), the widespread cultivation of which can be attributed to its good adaptation to different environments. Results The barley HvSnRK gene family was elucidated in its entirety from publicly-available genome data and found to comprise 50 genes. Phylogenetic analyses assigned six of the genes to the HvSnRK1 subfamily, 10 to HvSnRK2 and 34 to HvSnRK3 . The search was validated by applying it to Arabidopsis ( Arabidopsis thaliana ) and rice ( Oryza sativa ) genome data, identifying 50 SnRK genes in rice (four OsSnRK1 , 11 OsSnRK2 and 35 OsSnRK3 ) and 39 in Arabidopsis (three AtSnRK1 , 10 AtSnRK2 and 26 AtSnRK3 ). Specific motifs were identified in the encoded barley proteins, and multiple putative regulatory elements were found in the gene promoters, with light-regulated elements (LRE), ABA response elements (ABRE) and methyl jasmonate response elements (MeJa) the most common. RNA-seq analysis showed that many of the HvSnRK genes responded to ABA, some positively, some negatively and some with complex time-dependent responses. Conclusions The barley HvSnRK gene family is large, comprising 50 members, subdivided into HvSnRK1 (6 members), HvSnRK2 (10 members) and HvSnRK3 (34 members), showing differential positive and negative responses to ABA.
BACKGROUNDSucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and divergence of the plant gene family has led to the evolution of three subfamilies, SnRK1, SnRK2 and SnRK3, of which SnRK2 and SnRK3 are unique to plants. Therefore, the study of SnRKs in crops may lead to the development of strategies for breeding crop varieties that are more resilient under stress conditions. In the present study, we describe the SnRK gene family of barley (Hordeum vulgare), the widespread cultivation of which can be attributed to its good adaptation to different environments. RESULTSThe barley HvSnRK gene family was elucidated in its entirety from publicly-available genome data and found to comprise 50 genes. Phylogenetic analyses assigned six of the genes to the HvSnRK1 subfamily, 10 to HvSnRK2 and 34 to HvSnRK3. The search was validated by applying it to Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa) genome data, identifying 50 SnRK genes in rice (four OsSnRK1, 11 OsSnRK2 and 35 OsSnRK3) and 39 in Arabidopsis (three AtSnRK1, 10 AtSnRK2 and 26 AtSnRK3). Specific motifs were identified in the encoded barley proteins, and multiple putative regulatory elements were found in the gene promoters, with light-regulated elements (LRE), ABA response elements (ABRE) and methyl jasmonate response elements (MeJa) the most common. RNA-seq analysis showed that many of the HvSnRK genes responded to ABA, some positively, some negatively and some with complex time-dependent responses. CONCLUSIONSThe barley HvSnRK gene family is large, comprising 50 members, subdivided into HvSnRK1 (6 members), HvSnRK2 (10 members) and HvSnRK3 (34 members), showing differential positive and negative responses to ABA.
Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and divergence of the plant gene family has led to the evolution of three subfamilies, SnRK1, SnRK2 and SnRK3, of which SnRK2 and SnRK3 are unique to plants. Therefore, the study of SnRKs in crops may lead to the development of strategies for breeding crop varieties that are more resilient under stress conditions. In the present study, we describe the SnRK gene family of barley (Hordeum vulgare), the widespread cultivation of which can be attributed to its good adaptation to different environments. The barley HvSnRK gene family was elucidated in its entirety from publicly-available genome data and found to comprise 50 genes. Phylogenetic analyses assigned six of the genes to the HvSnRK1 subfamily, 10 to HvSnRK2 and 34 to HvSnRK3. The search was validated by applying it to Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa) genome data, identifying 50 SnRK genes in rice (four OsSnRK1, 11 OsSnRK2 and 35 OsSnRK3) and 39 in Arabidopsis (three AtSnRK1, 10 AtSnRK2 and 26 AtSnRK3). Specific motifs were identified in the encoded barley proteins, and multiple putative regulatory elements were found in the gene promoters, with light-regulated elements (LRE), ABA response elements (ABRE) and methyl jasmonate response elements (MeJa) the most common. RNA-seq analysis showed that many of the HvSnRK genes responded to ABA, some positively, some negatively and some with complex time-dependent responses. The barley HvSnRK gene family is large, comprising 50 members, subdivided into HvSnRK1 (6 members), HvSnRK2 (10 members) and HvSnRK3 (34 members), showing differential positive and negative responses to ABA.
Background Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a conduit for crosstalk between metabolic and stress signalling, in some cases involving the stress hormone, abscisic acid (ABA). The burgeoning and divergence of the plant gene family has led to the evolution of three subfamilies, SnRK1, SnRK2 and SnRK3, of which SnRK2 and SnRK3 are unique to plants. Therefore, the study of SnRKs in crops may lead to the development of strategies for breeding crop varieties that are more resilient under stress conditions. In the present study, we describe the SnRK gene family of barley (Hordeum vulgare), the widespread cultivation of which can be attributed to its good adaptation to different environments. Results The barley HvSnRK gene family was elucidated in its entirety from publicly-available genome data and found to comprise 50 genes. Phylogenetic analyses assigned six of the genes to the HvSnRK1 subfamily, 10 to HvSnRK2 and 34 to HvSnRK3. The search was validated by applying it to Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa) genome data, identifying 50 SnRK genes in rice (four OsSnRK1, 11 OsSnRK2 and 35 OsSnRK3) and 39 in Arabidopsis (three AtSnRK1, 10 AtSnRK2 and 26 AtSnRK3). Specific motifs were identified in the encoded barley proteins, and multiple putative regulatory elements were found in the gene promoters, with light-regulated elements (LRE), ABA response elements (ABRE) and methyl jasmonate response elements (MeJa) the most common. RNA-seq analysis showed that many of the HvSnRK genes responded to ABA, some positively, some negatively and some with complex time-dependent responses. Conclusions The barley HvSnRK gene family is large, comprising 50 members, subdivided into HvSnRK1 (6 members), HvSnRK2 (10 members) and HvSnRK3 (34 members), showing differential positive and negative responses to ABA.
ArticleNumber 300
Audience Academic
Author Chen, Zhiwei
Zhou, Longhua
Liu, Chenghong
Jiang, Panpan
Halford, Nigel G
Lu, Ruiju
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  organization: Shanghai Key Laboratory of Agricultural Genetics and Breeding, Shanghai, 201106, China
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  surname: Lu
  fullname: Lu, Ruiju
  organization: Shanghai Key Laboratory of Agricultural Genetics and Breeding, Shanghai, 201106, China
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  organization: Shanghai Key Laboratory of Agricultural Genetics and Breeding, Shanghai, 201106, China. liuchenghong@saas.sh.cn
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Cites_doi 10.1104/pp.108.3.1203
10.1093/pcp/pcq156
10.1104/pp.121.3.813
10.1073/pnas.96.8.4718
10.1016/S1534-5807(02)00229-0
10.3390/genes11010035
10.1093/nar/30.1.325
10.1016/S1672-0229(10)60008-3
10.1016/S0021-9258(18)46873-1
10.1074/jbc.M509820200
10.1046/j.1365-313X.2001.01167.x
10.1023/A:1006024231305
10.1111/j.1365-313X.1992.tb00148.x
10.1104/pp.120.1.257
10.1104/pp.112.3.1141
10.1093/molbev/mst010
10.1371/journal.pgen.1002020
10.1038/nature06069
10.1172/JCI0214571
10.1186/s12864-019-5991-8
10.1111/j.1467-7652.2006.00190.x
10.1016/0014-5793(95)01343-1
10.1007/BF00020898
10.1146/annurev-arplant-042809-112122
10.1073/pnas.97.7.3730
10.1093/jxb/erg085
10.1186/s12863-017-0517-3
10.1093/jxb/err320
10.1093/bioinformatics/btr088
10.1093/aob/mcp285
10.1104/pp.111.184648
10.1016/j.plantsci.2019.110217
10.1016/j.molp.2020.06.009
10.1111/j.1744-7348.2008.00302.x
10.1104/pp.103.033068
10.1186/s12870-020-02484-3
10.1016/j.tplants.2016.04.008
10.1093/nar/gkh088
10.1093/nar/gkr1293
10.1126/science.1215106
10.1104/pp.17.01404
10.1046/j.1365-313X.1998.00108.x
10.3390/ijms21113876
10.1093/emboj/20.5.1051
10.1104/pp.124.4.1844
10.1016/j.plantsci.2015.05.008
10.1111/j.1365-313X.2006.02789.x
10.3390/ijms21165668
10.1016/j.plaphy.2005.06.004
10.1105/tpc.019943
10.1093/pcp/pcp083
10.1046/j.0016-8025.2001.00824.x
10.1104/pp.102.011999
10.1089/omi.2011.0091
10.1073/pnas.91.7.2582
10.1073/pnas.97.7.3735
10.1105/tpc.11.12.2393
10.1073/pnas.0602316103
10.1016/j.jcs.2013.06.009
10.1038/nature08599
10.1093/bioinformatics/btu033
10.1104/pp.103.037440
10.1111/j.1365-313X.2005.02583.x
10.1073/pnas.88.19.8602
10.1073/pnas.89.21.10183
10.3389/fpls.2017.00993
10.3390/ijms18091834
10.1016/j.tplants.2020.01.009
10.1093/nar/gkw1129
10.1042/BJ20082408
10.1111/j.1399-3054.2008.01106.x
10.1093/jxb/erz066
10.1038/s41598-018-22101-6
10.1023/A:1010600603276
10.1046/j.1365-313X.2003.01823.x
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Issue 1
Keywords Barley
SnRK
Hordeum vulgare
Abscisic acid
Metabolic regulation
Stress responses
Gene family
Sucrose nonfermenting-1
Language English
License Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
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References O Filipe (7601_CR24) 2018; 8
LD Holappa (7601_CR31) 1995; 108
Z Chen (7601_CR48) 2013; 58
A Tiessen (7601_CR5) 2003; 35
K Nakashima (7601_CR42) 2009; 50
L Wang (7601_CR60) 2015; 237
A Marchler-Bauer (7601_CR68) 2017; 45
U Halfter (7601_CR51) 2000; 97
H Fujii (7601_CR43) 2009; 462
P Coello (7601_CR47) 2012; 63
U Hannappel (7601_CR19) 1995; 27
S Hulsmans (7601_CR20) 2016; 21
C Sugden (7601_CR26) 1999; 120
Y Kobayashi (7601_CR33) 2004; 16
Y Zhang (7601_CR40) 2008; 153
Y Guo (7601_CR53) 2002; 3
A Perochon (7601_CR25) 2019; 288
H Sano (7601_CR49) 1994; 91
D Gong (7601_CR52) 2004; 134
S Laurie (7601_CR15) 2003; 54
A Alderson (7601_CR4) 1991; 88
Y Wang (7601_CR75) 2012; 40
W Zhu (7601_CR63) 2020; 20
V Albrecht (7601_CR64) 2001; 20
JHA Barker (7601_CR28) 1996; 112
D Wang (7601_CR76) 2010; 8
Y Zhang (7601_CR12) 2001; 28
RJ Anderberg (7601_CR30) 1992; 89
J Shi (7601_CR55) 1999; 11
I Letunic (7601_CR69) 2004; 32
T Umezawa (7601_CR38) 2010; 51
S Shen (7601_CR66) 2020; 11
SR Cutler (7601_CR34) 2010; 61
Z Liu (7601_CR35) 2017; 18
NG Halford (7601_CR18) 1992; 2
RM Crawford (7601_CR29) 2001; 45
J Schwachtje (7601_CR7) 2006; 103
W Zhao (7601_CR62) 2017; 18
L Margalha (7601_CR21) 2019; 70
M Jain (7601_CR11) 2008; 134
Q Shen (7601_CR22) 2011; 157
A Kulik (7601_CR44) 2011; 15
B Wurzinger (7601_CR65) 2018; 176
C Chen (7601_CR73) 2020; 13
J Kudla (7601_CR54) 1999; 96
S Wilkinson (7601_CR45) 2002; 25
R Yoshida (7601_CR41) 2006; 281
J Liu (7601_CR57) 2000; 97
Ü Kolukisaglu (7601_CR67) 2004; 134
H Kanegae (7601_CR10) 2005; 43
E Baena-González (7601_CR6) 2007; 448
D Lou (7601_CR32) 2017; 8
K-N Kim (7601_CR56) 2000; 124
Y Kobayashi (7601_CR37) 2005; 44
R-J Tang (7601_CR58) 2020; 25
RS McKibbin (7601_CR9) 2006; 4
M Arad (7601_CR13) 2002; 109
NG Halford (7601_CR2) 2009; 419
PC Purcell (7601_CR8) 1998; 14
D Darriba (7601_CR71) 2011; 27
M Lescot (7601_CR74) 2002; 30
YS Seo (7601_CR23) 2011; 7
N Sreenivasulu (7601_CR46) 2006; 47
Y Ikeda (7601_CR50) 1999; 121
EM Hrabak (7601_CR36) 2003; 132
A Stamatakis (7601_CR72) 2014; 30
SJ Hey (7601_CR3) 2010; 105
X Ma (7601_CR59) 2020; 21
P Wu (7601_CR61) 2017; 8
NG Halford (7601_CR1) 1998; 37
TY Curtis (7601_CR16) 2019; 20
FF Soon (7601_CR39) 2012; 335
S Raffan (7601_CR17) 2020; 21
TA Hardy (7601_CR14) 1994; 269
K Katoh (7601_CR70) 2013; 30
KL Ball (7601_CR27) 1995; 377
References_xml – volume: 108
  start-page: 1203
  issue: 3
  year: 1995
  ident: 7601_CR31
  publication-title: Plant Physiol
  doi: 10.1104/pp.108.3.1203
  contributor:
    fullname: LD Holappa
– volume: 51
  start-page: 1821
  issue: 11
  year: 2010
  ident: 7601_CR38
  publication-title: Plant Cell Physiol
  doi: 10.1093/pcp/pcq156
  contributor:
    fullname: T Umezawa
– volume: 121
  start-page: 813
  issue: 3
  year: 1999
  ident: 7601_CR50
  publication-title: Plant Physiol
  doi: 10.1104/pp.121.3.813
  contributor:
    fullname: Y Ikeda
– volume: 96
  start-page: 4718
  issue: 8
  year: 1999
  ident: 7601_CR54
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.96.8.4718
  contributor:
    fullname: J Kudla
– volume: 3
  start-page: 233
  issue: 2
  year: 2002
  ident: 7601_CR53
  publication-title: Dev Cell
  doi: 10.1016/S1534-5807(02)00229-0
  contributor:
    fullname: Y Guo
– volume: 11
  start-page: 35
  issue: 1
  year: 2020
  ident: 7601_CR66
  publication-title: Genes (Basel)
  doi: 10.3390/genes11010035
  contributor:
    fullname: S Shen
– volume: 30
  start-page: 325
  issue: 1
  year: 2002
  ident: 7601_CR74
  publication-title: Nucl Acids Res
  doi: 10.1093/nar/30.1.325
  contributor:
    fullname: M Lescot
– volume: 8
  start-page: 77
  issue: 1
  year: 2010
  ident: 7601_CR76
  publication-title: Genomics Proteomics Bioinformatics
  doi: 10.1016/S1672-0229(10)60008-3
  contributor:
    fullname: D Wang
– volume: 269
  start-page: 27907
  issue: 45
  year: 1994
  ident: 7601_CR14
  publication-title: J Biol Chem
  doi: 10.1016/S0021-9258(18)46873-1
  contributor:
    fullname: TA Hardy
– volume: 281
  start-page: 5310
  issue: 8
  year: 2006
  ident: 7601_CR41
  publication-title: J Biol Chem
  doi: 10.1074/jbc.M509820200
  contributor:
    fullname: R Yoshida
– volume: 28
  start-page: 431
  year: 2001
  ident: 7601_CR12
  publication-title: Plant J
  doi: 10.1046/j.1365-313X.2001.01167.x
  contributor:
    fullname: Y Zhang
– volume: 37
  start-page: 735
  issue: 5
  year: 1998
  ident: 7601_CR1
  publication-title: Plant Molec Biol
  doi: 10.1023/A:1006024231305
  contributor:
    fullname: NG Halford
– volume: 2
  start-page: 791
  issue: 5
  year: 1992
  ident: 7601_CR18
  publication-title: Plant J
  doi: 10.1111/j.1365-313X.1992.tb00148.x
  contributor:
    fullname: NG Halford
– volume: 120
  start-page: 257
  issue: 1
  year: 1999
  ident: 7601_CR26
  publication-title: Plant Physiol
  doi: 10.1104/pp.120.1.257
  contributor:
    fullname: C Sugden
– volume: 112
  start-page: 1141
  issue: 3
  year: 1996
  ident: 7601_CR28
  publication-title: Plant Physiol
  doi: 10.1104/pp.112.3.1141
  contributor:
    fullname: JHA Barker
– volume: 30
  start-page: 772
  issue: 4
  year: 2013
  ident: 7601_CR70
  publication-title: Mol Biol Evol
  doi: 10.1093/molbev/mst010
  contributor:
    fullname: K Katoh
– volume: 7
  start-page: e1002020
  year: 2011
  ident: 7601_CR23
  publication-title: PLoS Genet
  doi: 10.1371/journal.pgen.1002020
  contributor:
    fullname: YS Seo
– volume: 448
  start-page: 938
  issue: 7156
  year: 2007
  ident: 7601_CR6
  publication-title: Nature
  doi: 10.1038/nature06069
  contributor:
    fullname: E Baena-González
– volume: 109
  start-page: 357
  issue: 3
  year: 2002
  ident: 7601_CR13
  publication-title: J Clin Invest
  doi: 10.1172/JCI0214571
  contributor:
    fullname: M Arad
– volume: 20
  start-page: 628
  issue: 1
  year: 2019
  ident: 7601_CR16
  publication-title: BMC Genomics
  doi: 10.1186/s12864-019-5991-8
  contributor:
    fullname: TY Curtis
– volume: 4
  start-page: 409
  issue: 4
  year: 2006
  ident: 7601_CR9
  publication-title: Plant Biotech J
  doi: 10.1111/j.1467-7652.2006.00190.x
  contributor:
    fullname: RS McKibbin
– volume: 377
  start-page: 189
  issue: 2
  year: 1995
  ident: 7601_CR27
  publication-title: FEBS Letts
  doi: 10.1016/0014-5793(95)01343-1
  contributor:
    fullname: KL Ball
– volume: 27
  start-page: 235
  year: 1995
  ident: 7601_CR19
  publication-title: Plant Molec Biol
  doi: 10.1007/BF00020898
  contributor:
    fullname: U Hannappel
– volume: 61
  start-page: 651
  issue: 1
  year: 2010
  ident: 7601_CR34
  publication-title: Ann Rev Plant Biol
  doi: 10.1146/annurev-arplant-042809-112122
  contributor:
    fullname: SR Cutler
– volume: 97
  start-page: 3730
  issue: 7
  year: 2000
  ident: 7601_CR57
  publication-title: PNAS
  doi: 10.1073/pnas.97.7.3730
  contributor:
    fullname: J Liu
– volume: 8
  start-page: 162
  year: 2017
  ident: 7601_CR61
  publication-title: Front Plant Sci
  contributor:
    fullname: P Wu
– volume: 54
  start-page: 739
  issue: 383
  year: 2003
  ident: 7601_CR15
  publication-title: J Exp Bot
  doi: 10.1093/jxb/erg085
  contributor:
    fullname: S Laurie
– volume: 18
  start-page: 54
  issue: 1
  year: 2017
  ident: 7601_CR35
  publication-title: BMC Genet
  doi: 10.1186/s12863-017-0517-3
  contributor:
    fullname: Z Liu
– volume: 63
  start-page: 913
  issue: 2
  year: 2012
  ident: 7601_CR47
  publication-title: J Exp Bot
  doi: 10.1093/jxb/err320
  contributor:
    fullname: P Coello
– volume: 27
  start-page: 1164
  issue: 8
  year: 2011
  ident: 7601_CR71
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btr088
  contributor:
    fullname: D Darriba
– volume: 105
  start-page: 197
  issue: 2
  year: 2010
  ident: 7601_CR3
  publication-title: Ann Bot
  doi: 10.1093/aob/mcp285
  contributor:
    fullname: SJ Hey
– volume: 157
  start-page: 394
  year: 2011
  ident: 7601_CR22
  publication-title: Plant Physiol
  doi: 10.1104/pp.111.184648
  contributor:
    fullname: Q Shen
– volume: 288
  start-page: 110217
  year: 2019
  ident: 7601_CR25
  publication-title: Plant Sci
  doi: 10.1016/j.plantsci.2019.110217
  contributor:
    fullname: A Perochon
– volume: 13
  start-page: 1194
  issue: 8
  year: 2020
  ident: 7601_CR73
  publication-title: Mol Plant
  doi: 10.1016/j.molp.2020.06.009
  contributor:
    fullname: C Chen
– volume: 153
  start-page: 401
  issue: 3
  year: 2008
  ident: 7601_CR40
  publication-title: Ann Appl Biol
  doi: 10.1111/j.1744-7348.2008.00302.x
  contributor:
    fullname: Y Zhang
– volume: 134
  start-page: 43
  issue: 1
  year: 2004
  ident: 7601_CR67
  publication-title: Plant Physiol
  doi: 10.1104/pp.103.033068
  contributor:
    fullname: Ü Kolukisaglu
– volume: 20
  start-page: 287
  issue: 1
  year: 2020
  ident: 7601_CR63
  publication-title: BMC Plant Biol
  doi: 10.1186/s12870-020-02484-3
  contributor:
    fullname: W Zhu
– volume: 21
  start-page: 648
  issue: 8
  year: 2016
  ident: 7601_CR20
  publication-title: Trends Plant Sci
  doi: 10.1016/j.tplants.2016.04.008
  contributor:
    fullname: S Hulsmans
– volume: 32
  start-page: D142
  issue: 1
  year: 2004
  ident: 7601_CR69
  publication-title: Acids Res
  doi: 10.1093/nar/gkh088
  contributor:
    fullname: I Letunic
– volume: 40
  start-page: e49
  issue: 7
  year: 2012
  ident: 7601_CR75
  publication-title: Nucl. Acids Res.
  doi: 10.1093/nar/gkr1293
  contributor:
    fullname: Y Wang
– volume: 335
  start-page: 85
  issue: 6064
  year: 2012
  ident: 7601_CR39
  publication-title: Science
  doi: 10.1126/science.1215106
  contributor:
    fullname: FF Soon
– volume: 176
  start-page: 1085
  issue: 2
  year: 2018
  ident: 7601_CR65
  publication-title: Plant Physiol
  doi: 10.1104/pp.17.01404
  contributor:
    fullname: B Wurzinger
– volume: 14
  start-page: 195
  issue: 2
  year: 1998
  ident: 7601_CR8
  publication-title: Plant J
  doi: 10.1046/j.1365-313X.1998.00108.x
  contributor:
    fullname: PC Purcell
– volume: 21
  start-page: 3876
  issue: 11
  year: 2020
  ident: 7601_CR17
  publication-title: Int J Molec Sci
  doi: 10.3390/ijms21113876
  contributor:
    fullname: S Raffan
– volume: 20
  start-page: 1051
  issue: 5
  year: 2001
  ident: 7601_CR64
  publication-title: EMBO J
  doi: 10.1093/emboj/20.5.1051
  contributor:
    fullname: V Albrecht
– volume: 124
  start-page: 1844
  issue: 4
  year: 2000
  ident: 7601_CR56
  publication-title: Plant Physiol
  doi: 10.1104/pp.124.4.1844
  contributor:
    fullname: K-N Kim
– volume: 237
  start-page: 33
  year: 2015
  ident: 7601_CR60
  publication-title: Plant Sci
  doi: 10.1016/j.plantsci.2015.05.008
  contributor:
    fullname: L Wang
– volume: 47
  start-page: 310
  issue: 2
  year: 2006
  ident: 7601_CR46
  publication-title: Plant J
  doi: 10.1111/j.1365-313X.2006.02789.x
  contributor:
    fullname: N Sreenivasulu
– volume: 21
  start-page: 5668
  issue: 16
  year: 2020
  ident: 7601_CR59
  publication-title: Int J Mol Sci
  doi: 10.3390/ijms21165668
  contributor:
    fullname: X Ma
– volume: 43
  start-page: 669
  issue: 7
  year: 2005
  ident: 7601_CR10
  publication-title: Plant Physiol Biochem
  doi: 10.1016/j.plaphy.2005.06.004
  contributor:
    fullname: H Kanegae
– volume: 16
  start-page: 1163
  issue: 5
  year: 2004
  ident: 7601_CR33
  publication-title: Plant Cell
  doi: 10.1105/tpc.019943
  contributor:
    fullname: Y Kobayashi
– volume: 50
  start-page: 1345
  issue: 7
  year: 2009
  ident: 7601_CR42
  publication-title: Plant Cell Physiol.
  doi: 10.1093/pcp/pcp083
  contributor:
    fullname: K Nakashima
– volume: 25
  start-page: 195
  issue: 2
  year: 2002
  ident: 7601_CR45
  publication-title: Plant, Cell and Env
  doi: 10.1046/j.0016-8025.2001.00824.x
  contributor:
    fullname: S Wilkinson
– volume: 132
  start-page: 666
  issue: 2
  year: 2003
  ident: 7601_CR36
  publication-title: Plant Physiol
  doi: 10.1104/pp.102.011999
  contributor:
    fullname: EM Hrabak
– volume: 15
  start-page: 859
  issue: 12
  year: 2011
  ident: 7601_CR44
  publication-title: OMICS
  doi: 10.1089/omi.2011.0091
  contributor:
    fullname: A Kulik
– volume: 91
  start-page: 2582
  issue: 7
  year: 1994
  ident: 7601_CR49
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.91.7.2582
  contributor:
    fullname: H Sano
– volume: 97
  start-page: 3735
  issue: 7
  year: 2000
  ident: 7601_CR51
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.97.7.3735
  contributor:
    fullname: U Halfter
– volume: 11
  start-page: 2393
  issue: 12
  year: 1999
  ident: 7601_CR55
  publication-title: Plant Cell
  doi: 10.1105/tpc.11.12.2393
  contributor:
    fullname: J Shi
– volume: 103
  start-page: 12935
  issue: 34
  year: 2006
  ident: 7601_CR7
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.0602316103
  contributor:
    fullname: J Schwachtje
– volume: 58
  start-page: 255
  issue: 2
  year: 2013
  ident: 7601_CR48
  publication-title: J Cereal Sci
  doi: 10.1016/j.jcs.2013.06.009
  contributor:
    fullname: Z Chen
– volume: 462
  start-page: 660
  issue: 7273
  year: 2009
  ident: 7601_CR43
  publication-title: Nature
  doi: 10.1038/nature08599
  contributor:
    fullname: H Fujii
– volume: 30
  start-page: 1312
  issue: 9
  year: 2014
  ident: 7601_CR72
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btu033
  contributor:
    fullname: A Stamatakis
– volume: 134
  start-page: 919
  issue: 3
  year: 2004
  ident: 7601_CR52
  publication-title: Plant Physiol
  doi: 10.1104/pp.103.037440
  contributor:
    fullname: D Gong
– volume: 44
  start-page: 939
  issue: 6
  year: 2005
  ident: 7601_CR37
  publication-title: Plant J
  doi: 10.1111/j.1365-313X.2005.02583.x
  contributor:
    fullname: Y Kobayashi
– volume: 88
  start-page: 8602
  issue: 19
  year: 1991
  ident: 7601_CR4
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.88.19.8602
  contributor:
    fullname: A Alderson
– volume: 89
  start-page: 10183
  issue: 21
  year: 1992
  ident: 7601_CR30
  publication-title: PNAS
  doi: 10.1073/pnas.89.21.10183
  contributor:
    fullname: RJ Anderberg
– volume: 8
  start-page: 993
  year: 2017
  ident: 7601_CR32
  publication-title: Frontiers Plant Sci
  doi: 10.3389/fpls.2017.00993
  contributor:
    fullname: D Lou
– volume: 18
  start-page: 1834
  issue: 9
  year: 2017
  ident: 7601_CR62
  publication-title: Int J Mol Sci
  doi: 10.3390/ijms18091834
  contributor:
    fullname: W Zhao
– volume: 25
  start-page: 604
  issue: 6
  year: 2020
  ident: 7601_CR58
  publication-title: Trends Plant Sci
  doi: 10.1016/j.tplants.2020.01.009
  contributor:
    fullname: R-J Tang
– volume: 45
  start-page: D200
  issue: D1
  year: 2017
  ident: 7601_CR68
  publication-title: Nucleic Acids Res
  doi: 10.1093/nar/gkw1129
  contributor:
    fullname: A Marchler-Bauer
– volume: 419
  start-page: 247
  issue: 2
  year: 2009
  ident: 7601_CR2
  publication-title: Biochem J
  doi: 10.1042/BJ20082408
  contributor:
    fullname: NG Halford
– volume: 134
  start-page: 161
  issue: 1
  year: 2008
  ident: 7601_CR11
  publication-title: Physiol Plantarum
  doi: 10.1111/j.1399-3054.2008.01106.x
  contributor:
    fullname: M Jain
– volume: 70
  start-page: 2261
  issue: 8
  year: 2019
  ident: 7601_CR21
  publication-title: J Exp Bot
  doi: 10.1093/jxb/erz066
  contributor:
    fullname: L Margalha
– volume: 8
  start-page: 3864
  issue: 1
  year: 2018
  ident: 7601_CR24
  publication-title: Sci Rep
  doi: 10.1038/s41598-018-22101-6
  contributor:
    fullname: O Filipe
– volume: 45
  start-page: 731
  issue: 6
  year: 2001
  ident: 7601_CR29
  publication-title: Plant Molec. Biol.
  doi: 10.1023/A:1010600603276
  contributor:
    fullname: RM Crawford
– volume: 35
  start-page: 490
  issue: 4
  year: 2003
  ident: 7601_CR5
  publication-title: Plant J
  doi: 10.1046/j.1365-313X.2003.01823.x
  contributor:
    fullname: A Tiessen
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Snippet Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants, providing a...
Abstract Background Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in...
Background Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants,...
BACKGROUNDSucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in plants,...
Abstract Background Sucrose nonfermenting-1 (SNF1)-related protein kinases (SnRKs) play important roles in regulating metabolism and stress responses in...
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StartPage 300
SubjectTerms Abscisic acid
Abscisic Acid - pharmacology
Adenosine diphosphate
Analysis
Barley
Cloning
Crosstalk
Development strategies
Divergence
Enzymes
Gene expression
Gene Expression Regulation, Plant
Gene family
Genes
Genetic aspects
Genomes
Genomics
Glucose
Hardiness
Hordeum - genetics
Hordeum - metabolism
Hordeum vulgare
Identification and classification
Kinases
Metabolism
Methyl jasmonate
Phosphorylation
Phylogeny
Physiological aspects
Plant Breeding
Plant Proteins - genetics
Plant Proteins - metabolism
Plants
Protein kinase
Protein kinases
Proteins
Regulatory sequences
Ribonucleic acid
Rice
RNA
RNA sequencing
RNA-Seq
SnRK
Sorghum
Sucrose
Sucrose nonfermenting-1
Transcription factors
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Title Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment
URI https://www.ncbi.nlm.nih.gov/pubmed/33902444
https://www.proquest.com/docview/2528904846
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https://pubmed.ncbi.nlm.nih.gov/PMC8074225
https://doaj.org/article/af231612dcce41a9b44fe05d69088f88
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