Deep convolutional neural network for reduction of contrast-enhanced region on CT images
Abstract This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 × 64 pi...
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Published in | Journal of radiation research Vol. 60; no. 5; pp. 586 - 594 |
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Main Authors | , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
England
Oxford University Press
23.10.2019
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Abstract | Abstract
This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 × 64 pixels. This resulted in 14 723 patches in total for both non-contrast and contrast-enhanced CT image pairs. The proposed CNN model comprises five two-dimensional (2D) convolution layers with one shortcut path. For comparison, the U-net model, which comprises five 2D convolution layers interleaved with pooling and unpooling layers, was used. Training was performed in 24 patients and, for testing of trained models, another 5 patients were used. For quantitative evaluation, 50 regions of interest (ROIs) were selected on the reference contrast-enhanced image of the test data, and the mean pixel value of the ROIs was calculated. The mean pixel values of the ROIs at the same location on the reference non-contrast image and the predicted non-contrast image were calculated and those values were compared. Regarding the quantitative analysis, the difference in mean pixel value between the reference contrast-enhanced image and the predicted non-contrast image was significant (P < 0.0001) for both models. Significant differences in pixels (P < 0.0001) were found using the U-net model; in contrast, there was no significant difference using the proposed CNN model when comparing the reference non-contrast images and the predicted non-contrast images. Using the proposed CNN model, the contrast-enhanced region was satisfactorily reduced. |
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AbstractList | This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 x 64 pixels. This resulted in 14 723 patches in total for both non-contrast and contrast-enhanced CT image pairs. The proposed CNN model comprises five two-dimensional (2D) convolution layers with one shortcut path. For comparison, the U-net model, which comprises five 2D convolution layers interleaved with pooling and unpooling layers, was used. Training was performed in 24 patients and, for testing of trained models, another 5 patients were used. For quantitative evaluation, 50 regions of interest (ROIs) were selected on the reference contrast-enhanced image of the test data, and the mean pixel value of the ROIs was calculated. The mean pixel values of the ROIs at the same location on the reference non-contrast image and the predicted non-contrast image were calculated and those values were compared. Regarding the quantitative analysis, the difference in mean pixel value between the reference contrast-enhanced image and the predicted non-contrast image was significant (P < 0.0001) for both models. Significant differences in pixels (P < 0.0001) were found using the U-net model; in contrast, there was no significant difference using the proposed CNN model when comparing the reference non-contrast images and the predicted non-contrast images. Using the proposed CNN model, the contrast-enhanced region was satisfactorily reduced. Keywords: deep learning; convolution neural network; CT; contrast enhancement Abstract This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 × 64 pixels. This resulted in 14 723 patches in total for both non-contrast and contrast-enhanced CT image pairs. The proposed CNN model comprises five two-dimensional (2D) convolution layers with one shortcut path. For comparison, the U-net model, which comprises five 2D convolution layers interleaved with pooling and unpooling layers, was used. Training was performed in 24 patients and, for testing of trained models, another 5 patients were used. For quantitative evaluation, 50 regions of interest (ROIs) were selected on the reference contrast-enhanced image of the test data, and the mean pixel value of the ROIs was calculated. The mean pixel values of the ROIs at the same location on the reference non-contrast image and the predicted non-contrast image were calculated and those values were compared. Regarding the quantitative analysis, the difference in mean pixel value between the reference contrast-enhanced image and the predicted non-contrast image was significant (P < 0.0001) for both models. Significant differences in pixels (P < 0.0001) were found using the U-net model; in contrast, there was no significant difference using the proposed CNN model when comparing the reference non-contrast images and the predicted non-contrast images. Using the proposed CNN model, the contrast-enhanced region was satisfactorily reduced. This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 x 64 pixels. This resulted in 14 723 patches in total for both non-contrast and contrast-enhanced CT image pairs. The proposed CNN model comprises five two-dimensional (2D) convolution layers with one shortcut path. For comparison, the U-net model, which comprises five 2D convolution layers interleaved with pooling and unpooling layers, was used. Training was performed in 24 patients and, for testing of trained models, another 5 patients were used. For quantitative evaluation, 50 regions of interest (ROIs) were selected on the reference contrast-enhanced image of the test data, and the mean pixel value of the ROIs was calculated. The mean pixel values of the ROIs at the same location on the reference non-contrast image and the predicted non-contrast image were calculated and those values were compared. Regarding the quantitative analysis, the difference in mean pixel value between the reference contrast-enhanced image and the predicted non-contrast image was significant (P < 0.0001) for both models. Significant differences in pixels (P < 0.0001) were found using the U-net model; in contrast, there was no significant difference using the proposed CNN model when comparing the reference non-contrast images and the predicted non-contrast images. Using the proposed CNN model, the contrast-enhanced region was satisfactorily reduced. This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 × 64 pixels. This resulted in 14 723 patches in total for both non-contrast and contrast-enhanced CT image pairs. The proposed CNN model comprises five two-dimensional (2D) convolution layers with one shortcut path. For comparison, the U-net model, which comprises five 2D convolution layers interleaved with pooling and unpooling layers, was used. Training was performed in 24 patients and, for testing of trained models, another 5 patients were used. For quantitative evaluation, 50 regions of interest (ROIs) were selected on the reference contrast-enhanced image of the test data, and the mean pixel value of the ROIs was calculated. The mean pixel values of the ROIs at the same location on the reference non-contrast image and the predicted non-contrast image were calculated and those values were compared. Regarding the quantitative analysis, the difference in mean pixel value between the reference contrast-enhanced image and the predicted non-contrast image was significant ( P < 0.0001) for both models. Significant differences in pixels ( P < 0.0001) were found using the U-net model; in contrast, there was no significant difference using the proposed CNN model when comparing the reference non-contrast images and the predicted non-contrast images. Using the proposed CNN model, the contrast-enhanced region was satisfactorily reduced. This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 × 64 pixels. This resulted in 14 723 patches in total for both non-contrast and contrast-enhanced CT image pairs. The proposed CNN model comprises five two-dimensional (2D) convolution layers with one shortcut path. For comparison, the U-net model, which comprises five 2D convolution layers interleaved with pooling and unpooling layers, was used. Training was performed in 24 patients and, for testing of trained models, another 5 patients were used. For quantitative evaluation, 50 regions of interest (ROIs) were selected on the reference contrast-enhanced image of the test data, and the mean pixel value of the ROIs was calculated. The mean pixel values of the ROIs at the same location on the reference non-contrast image and the predicted non-contrast image were calculated and those values were compared. Regarding the quantitative analysis, the difference in mean pixel value between the reference contrast-enhanced image and the predicted non-contrast image was significant (P < 0.0001) for both models. Significant differences in pixels (P < 0.0001) were found using the U-net model; in contrast, there was no significant difference using the proposed CNN model when comparing the reference non-contrast images and the predicted non-contrast images. Using the proposed CNN model, the contrast-enhanced region was satisfactorily reduced. This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 × 64 pixels. This resulted in 14 723 patches in total for both non-contrast and contrast-enhanced CT image pairs. The proposed CNN model comprises five two-dimensional (2D) convolution layers with one shortcut path. For comparison, the U-net model, which comprises five 2D convolution layers interleaved with pooling and unpooling layers, was used. Training was performed in 24 patients and, for testing of trained models, another 5 patients were used. For quantitative evaluation, 50 regions of interest (ROIs) were selected on the reference contrast-enhanced image of the test data, and the mean pixel value of the ROIs was calculated. The mean pixel values of the ROIs at the same location on the reference non-contrast image and the predicted non-contrast image were calculated and those values were compared. Regarding the quantitative analysis, the difference in mean pixel value between the reference contrast-enhanced image and the predicted non-contrast image was significant (P < 0.0001) for both models. Significant differences in pixels (P < 0.0001) were found using the U-net model; in contrast, there was no significant difference using the proposed CNN model when comparing the reference non-contrast images and the predicted non-contrast images. Using the proposed CNN model, the contrast-enhanced region was satisfactorily reduced.This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were selected. CT images were acquired without and with a contrast enhancement medium. The transverse images were divided into 64 × 64 pixels. This resulted in 14 723 patches in total for both non-contrast and contrast-enhanced CT image pairs. The proposed CNN model comprises five two-dimensional (2D) convolution layers with one shortcut path. For comparison, the U-net model, which comprises five 2D convolution layers interleaved with pooling and unpooling layers, was used. Training was performed in 24 patients and, for testing of trained models, another 5 patients were used. For quantitative evaluation, 50 regions of interest (ROIs) were selected on the reference contrast-enhanced image of the test data, and the mean pixel value of the ROIs was calculated. The mean pixel values of the ROIs at the same location on the reference non-contrast image and the predicted non-contrast image were calculated and those values were compared. Regarding the quantitative analysis, the difference in mean pixel value between the reference contrast-enhanced image and the predicted non-contrast image was significant (P < 0.0001) for both models. Significant differences in pixels (P < 0.0001) were found using the U-net model; in contrast, there was no significant difference using the proposed CNN model when comparing the reference non-contrast images and the predicted non-contrast images. Using the proposed CNN model, the contrast-enhanced region was satisfactorily reduced. |
Audience | Academic |
Author | Seo, Yuji Kizaki, Hisao Yamashita, Kyohei Yamaguchi, Hajime Kitamori, Hideki Ogawa, Kazuhiko Yamada, Yuji Isohashi, Fumiaki Aboshi, Keiko Magome, Taiki Sumida, Iori Das, Indra J |
AuthorAffiliation | 3 Department of Health Sciences , Graduate School of Medicine Science, Kyusyu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka, Japan 1 Department of Radiation Oncology , Osaka University Graduate School of Medicine, 2-2 Yamada-oka, Suita, Osaka, Japan 6 Department of Radiation Oncology , NTT West Osaka hospital, 2-6-40 Karasugatsuji, Tennoji-ku, Osaka, Japan 4 Department of Oral and Maxillofacial Radiology , Osaka University Graduate School of Dentistry, 1-8 Yamada-oka Suita, Japan 5 Department of Radiation Oncology , New York University Langone Medical Center, Laura & Isaac Perlmutter Cancer Center, 160 E 34th Street, New York, NY, USA 2 Department of Radiological Sciences , Faculty of Health Sciences, Komazawa University, 1-23-1 Komazawa, Setagaya-ku, Tokyo, Japan |
AuthorAffiliation_xml | – name: 3 Department of Health Sciences , Graduate School of Medicine Science, Kyusyu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka, Japan – name: 4 Department of Oral and Maxillofacial Radiology , Osaka University Graduate School of Dentistry, 1-8 Yamada-oka Suita, Japan – name: 5 Department of Radiation Oncology , New York University Langone Medical Center, Laura & Isaac Perlmutter Cancer Center, 160 E 34th Street, New York, NY, USA – name: 6 Department of Radiation Oncology , NTT West Osaka hospital, 2-6-40 Karasugatsuji, Tennoji-ku, Osaka, Japan – name: 2 Department of Radiological Sciences , Faculty of Health Sciences, Komazawa University, 1-23-1 Komazawa, Setagaya-ku, Tokyo, Japan – name: 1 Department of Radiation Oncology , Osaka University Graduate School of Medicine, 2-2 Yamada-oka, Suita, Osaka, Japan |
Author_xml | – sequence: 1 givenname: Iori surname: Sumida fullname: Sumida, Iori email: sumida@radonc.med.osaka-u.ac.jp organization: Department of Radiation Oncology, Osaka University Graduate School of Medicine, 2-2 Yamada-oka, Suita, Osaka, Japan – sequence: 2 givenname: Taiki surname: Magome fullname: Magome, Taiki organization: Department of Radiological Sciences, Faculty of Health Sciences, Komazawa University, 1-23-1 Komazawa, Setagaya-ku, Tokyo, Japan – sequence: 3 givenname: Hideki surname: Kitamori fullname: Kitamori, Hideki organization: Department of Health Sciences, Graduate School of Medicine Science, Kyusyu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka, Japan – sequence: 4 givenname: Indra J surname: Das fullname: Das, Indra J organization: Department of Radiation Oncology, New York University Langone Medical Center, Laura & Isaac Perlmutter Cancer Center, 160 E 34th Street, New York, NY, USA – sequence: 5 givenname: Hajime surname: Yamaguchi fullname: Yamaguchi, Hajime organization: Department of Radiation Oncology, NTT West Osaka hospital, 2-6-40 Karasugatsuji, Tennoji-ku, Osaka, Japan – sequence: 6 givenname: Hisao surname: Kizaki fullname: Kizaki, Hisao organization: Department of Radiation Oncology, NTT West Osaka hospital, 2-6-40 Karasugatsuji, Tennoji-ku, Osaka, Japan – sequence: 7 givenname: Keiko surname: Aboshi fullname: Aboshi, Keiko organization: Department of Radiation Oncology, NTT West Osaka hospital, 2-6-40 Karasugatsuji, Tennoji-ku, Osaka, Japan – sequence: 8 givenname: Kyohei surname: Yamashita fullname: Yamashita, Kyohei organization: Department of Radiation Oncology, NTT West Osaka hospital, 2-6-40 Karasugatsuji, Tennoji-ku, Osaka, Japan – sequence: 9 givenname: Yuji surname: Yamada fullname: Yamada, Yuji organization: Department of Radiation Oncology, NTT West Osaka hospital, 2-6-40 Karasugatsuji, Tennoji-ku, Osaka, Japan – sequence: 10 givenname: Yuji surname: Seo fullname: Seo, Yuji organization: Department of Radiation Oncology, Osaka University Graduate School of Medicine, 2-2 Yamada-oka, Suita, Osaka, Japan – sequence: 11 givenname: Fumiaki surname: Isohashi fullname: Isohashi, Fumiaki organization: Department of Radiation Oncology, Osaka University Graduate School of Medicine, 2-2 Yamada-oka, Suita, Osaka, Japan – sequence: 12 givenname: Kazuhiko surname: Ogawa fullname: Ogawa, Kazuhiko organization: Department of Radiation Oncology, Osaka University Graduate School of Medicine, 2-2 Yamada-oka, Suita, Osaka, Japan |
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This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine... This study aims to produce non-contrast computed tomography (CT) images using a deep convolutional neural network (CNN) for imaging. Twenty-nine patients were... |
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SubjectTerms | Artificial neural networks CAT scans Computed tomography Contrast Media - chemistry Diagnostic imaging Dose-Response Relationship, Radiation Humans Image acquisition Medical imaging Medical imaging equipment Medical research Neural networks Neural Networks, Computer Pixels Quantitative analysis Regular Papers Technology application Time Factors Tomography Tomography, X-Ray Computed |
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Title | Deep convolutional neural network for reduction of contrast-enhanced region on CT images |
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