Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility

Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass crops, and of interest in grass evolution. Definitive evidence on the genes responsible is lacking so we studied a candidate gene that we identif...

Full description

Saved in:
Bibliographic Details
Published inThe New phytologist Vol. 218; no. 1; pp. 81 - 93
Main Authors Souza, Wagner R., Martins, Polyana K., Freeman, Jackie, Pellny, Till K., Michaelson, Louise V., Sampaio, Bruno L., Vinecky, Felipe, Ribeiro, Ana P., Cunha, Barbara A. D. B., Kobayashi, Adilson K., Oliveira, Patricia A., Campanha, Raquel B., Pacheco, Thályta F., Martarello, Danielly C. I., Marchiosi, Rogério, Ferrarese‐Filho, Osvaldo, Santos, Wanderley D., Tramontina, Robson, Squina, Fabio M., Centeno, Danilo C., Gaspar, Marília, Braga, Marcia R., Tiné, Marco A. S., Ralph, John, Mitchell, Rowan A. C., Molinari, Hugo B. C.
Format Journal Article
LanguageEnglish
Published England New Phytologist Trust 01.04.2018
Wiley Subscription Services, Inc
Wiley
John Wiley and Sons Inc
Subjects
AC generators
acyl coenzyme A
Animal nutrition
Arabinose
arabinoxylan
BASIC BIOLOGICAL SCIENCES
Biofuels
Biological evolution
Biomass
biomass production
biorefining
Brachypodium distachyon
cell wall acylation
Cell walls
CoA transferase
Crops
Digestibility
Dimensional changes
evolution
Evolutionary genetics
ferulic acid
Gene expression
Genes
grass evolution
Grasses
hydroxycinnamates
Lignin
lignocellulosic feedstock
NMR
Nuclear magnetic resonance
nuclear magnetic resonance spectroscopy
Nucleic acids
Nutrition
Ribonucleic acid
RNA
RNA interference
RNA-mediated interference
Saccharification
Setaria
Setaria viridis
Stems
transferases
grass evolution
lignocellulosic feedstock
cell wall acylation
ferulic acid
hydroxycinnamates
Online AccessGet full text

Cover

Abstract Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass crops, and of interest in grass evolution. Definitive evidence on the genes responsible is lacking so we studied a candidate gene that we identified within the BAHD acyl-CoA transferase family. We used RNA interference (RNAi) silencing of orthologs in the model grasses Setaria viridis (SvBAHD01) and Brachypodium distachyon (BdBAHD01) and determined effects on AX feruloylation. Silencing of SvBAHD01 in Setaria resulted in a c. 60% decrease in AX feruloylation in stems consistently across four generations. Silencing of BdBAHD01 in Brachypodium stems decreased feruloylation much less, possibly due to higher expression of functionally redundant genes. Setaria SvBAHD01 RNAi plants showed: no decrease in total lignin, approximately doubled arabinose acylated by p-coumarate, changes in two-dimensional NMR spectra of unfractionated cell walls consistent with biochemical estimates, no effect on total biomass production and an increase in biomass saccharification efficiency of 40–60%. We provide the first strong evidence for a key role of the BAHD01 gene in AX feruloylation and demonstrate that it is a promising target for improvement of grass crops for biofuel, biorefining and animal nutrition applications.
AbstractList Feruloylation of arabinoxylan ( AX ) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass crops, and of interest in grass evolution. Definitive evidence on the genes responsible is lacking so we studied a candidate gene that we identified within the BAHD acyl‐CoA transferase family. We used RNA interference (RNAi) silencing of orthologs in the model grasses Setaria viridis ( Sv BAHD 01 ) and Brachypodium distachyon ( Bd BAHD 01 ) and determined effects on AX feruloylation. Silencing of Sv BAHD 01 in Setaria resulted in a c . 60% decrease in AX feruloylation in stems consistently across four generations. Silencing of Bd BAHD 01 in Brachypodium stems decreased feruloylation much less, possibly due to higher expression of functionally redundant genes. Setaria Sv BAHD 01 RNA i plants showed: no decrease in total lignin, approximately doubled arabinose acylated by p ‐coumarate, changes in two‐dimensional NMR spectra of unfractionated cell walls consistent with biochemical estimates, no effect on total biomass production and an increase in biomass saccharification efficiency of 40–60%. We provide the first strong evidence for a key role of the BAHD 01 gene in AX feruloylation and demonstrate that it is a promising target for improvement of grass crops for biofuel, biorefining and animal nutrition applications. See also the Commentary on this article by Gómez & McQueen‐Mason, 218 : 5–7 .
Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass crops, and of interest in grass evolution. Definitive evidence on the genes responsible is lacking so we studied a candidate gene that we identified within the BAHD acyl-CoA transferase family. We used RNA interference (RNAi) silencing of orthologs in the model grasses Setaria viridis (SvBAHD01) and Brachypodium distachyon (BdBAHD01) and determined effects on AX feruloylation. Silencing of SvBAHD01 in Setaria resulted in a c. 60% decrease in AX feruloylation in stems consistently across four generations. Silencing of BdBAHD01 in Brachypodium stems decreased feruloylation much less, possibly due to higher expression of functionally redundant genes. Setaria SvBAHD01 RNAi plants showed: no decrease in total lignin, approximately doubled arabinose acylated by p-coumarate, changes in two-dimensional NMR spectra of unfractionated cell walls consistent with biochemical estimates, no effect on total biomass production and an increase in biomass saccharification efficiency of 40-60%. We provide the first strong evidence for a key role of the BAHD01 gene in AX feruloylation and demonstrate that it is a promising target for improvement of grass crops for biofuel, biorefining and animal nutrition applications.
Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass crops, and of interest in grass evolution. Definitive evidence on the genes responsible is lacking so we studied a candidate gene that we identified within the BAHD acyl-CoA transferase family. We used RNA interference (RNAi) silencing of orthologs in the model grasses Setaria viridis (SvBAHD01) and Brachypodium distachyon (BdBAHD01) and determined effects on AX feruloylation. Silencing of SvBAHD01 in Setaria resulted in a c. 60% decrease in AX feruloylation in stems consistently across four generations. Silencing of BdBAHD01 in Brachypodium stems decreased feruloylation much less, possibly due to higher expression of functionally redundant genes. Setaria SvBAHD01 RNAi plants showed: no decrease in total lignin, approximately doubled arabinose acylated by p-coumarate, changes in two-dimensional NMR spectra of unfractionated cell walls consistent with biochemical estimates, no effect on total biomass production and an increase in biomass saccharification efficiency of 40-60%. We provide the first strong evidence for a key role of the BAHD01 gene in AX feruloylation and demonstrate that it is a promising target for improvement of grass crops for biofuel, biorefining and animal nutrition applications.Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass crops, and of interest in grass evolution. Definitive evidence on the genes responsible is lacking so we studied a candidate gene that we identified within the BAHD acyl-CoA transferase family. We used RNA interference (RNAi) silencing of orthologs in the model grasses Setaria viridis (SvBAHD01) and Brachypodium distachyon (BdBAHD01) and determined effects on AX feruloylation. Silencing of SvBAHD01 in Setaria resulted in a c. 60% decrease in AX feruloylation in stems consistently across four generations. Silencing of BdBAHD01 in Brachypodium stems decreased feruloylation much less, possibly due to higher expression of functionally redundant genes. Setaria SvBAHD01 RNAi plants showed: no decrease in total lignin, approximately doubled arabinose acylated by p-coumarate, changes in two-dimensional NMR spectra of unfractionated cell walls consistent with biochemical estimates, no effect on total biomass production and an increase in biomass saccharification efficiency of 40-60%. We provide the first strong evidence for a key role of the BAHD01 gene in AX feruloylation and demonstrate that it is a promising target for improvement of grass crops for biofuel, biorefining and animal nutrition applications.
Summary Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass crops, and of interest in grass evolution. Definitive evidence on the genes responsible is lacking so we studied a candidate gene that we identified within the BAHD acyl‐CoA transferase family. We used RNA interference (RNAi) silencing of orthologs in the model grasses Setaria viridis (SvBAHD01) and Brachypodium distachyon (BdBAHD01) and determined effects on AX feruloylation. Silencing of SvBAHD01 in Setaria resulted in a c. 60% decrease in AX feruloylation in stems consistently across four generations. Silencing of BdBAHD01 in Brachypodium stems decreased feruloylation much less, possibly due to higher expression of functionally redundant genes. Setaria SvBAHD01 RNAi plants showed: no decrease in total lignin, approximately doubled arabinose acylated by p‐coumarate, changes in two‐dimensional NMR spectra of unfractionated cell walls consistent with biochemical estimates, no effect on total biomass production and an increase in biomass saccharification efficiency of 40–60%. We provide the first strong evidence for a key role of the BAHD01 gene in AX feruloylation and demonstrate that it is a promising target for improvement of grass crops for biofuel, biorefining and animal nutrition applications. See also the Commentary on this article by Gómez & McQueen‐Mason, 218: 5–7.
Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass crops, and of interest in grass evolution. Definitive evidence on the genes responsible is lacking so we studied a candidate gene that we identified within the BAHD acyl-CoA transferase family. We used RNA interference (RNAi) silencing of orthologs in the model grasses Setaria viridis (SvBAHD01) and Brachypodium distachyon (BdBAHD01) and determined effects on AX feruloylation. Silencing of SvBAHD01 in Setaria resulted in a c. 60% decrease in AX feruloylation in stems consistently across four generations. Silencing of BdBAHD01 in Brachypodium stems decreased feruloylation much less, possibly due to higher expression of functionally redundant genes. Setaria SvBAHD01 RNAi plants showed: no decrease in total lignin, approximately doubled arabinose acylated by p-coumarate, changes in two-dimensional NMR spectra of unfractionated cell walls consistent with biochemical estimates, no effect on total biomass production and an increase in biomass saccharification efficiency of 40–60%. We provide the first strong evidence for a key role of the BAHD01 gene in AX feruloylation and demonstrate that it is a promising target for improvement of grass crops for biofuel, biorefining and animal nutrition applications.
Author Jackie Freeman
Raquel B. Campanha
Bruno L. Sampaio
Osvaldo Ferrarese-Filho
Wagner R. de Souza
Rowan A. C. Mitchell
Marco A. S. Tiné
Barbara A. D. B. da Cunha
Marília Gaspar
Robson Tramontina
Danielly C. I. Martarello
Rogério Marchiosi
John Ralph
Adilson K. Kobayashi
Ana P. Ribeiro
Polyana K. Martins
Felipe Vinecky
Wanderley D. dos Santos
Hugo B. C. Molinari
Louise V. Michaelson
Patricia A. de Oliveira
Fabio M. Squina
Till K. Pellny
Thályta F. Pacheco
Danilo C. Centeno
Marcia R. Braga
AuthorAffiliation 9 Department of Energy's Great Lakes Bioenergy Research Center Wisconsin Energy Institute University of Wisconsin Madison WI 537 USA
5 Programa de Processos Tecnológicos e Ambientais Universidade de Sorocaba (UNISO) Sorocaba 18060‐000 Brazil
2 Plant Sciences Rothamsted Research Harpenden, Hertfordshire AL5 2JQ UK
4 Brazilian Bioethanol Science and Technology Laboratory Brazilian Center for Research in Energy and Materials Campinas, Sao Paulo 13083‐100 Brazil
8 Department of Biochemistry University of Wisconsin Madison WI 537 USA
1 Embrapa Agroenergy Brasília DF 70770901 Brazil
7 Department of Plant Physiology and Biochemistry Institute of Botany Sao Paulo 04301‐012, 04301‐902 Brazil
3 Department of Biochemistry State University of Maringá Maringá, Paraná 87020‐900 Brazil
6 Centre of Natural Sciences and Humanities Federal University of ABC São Bernardo do Campo SP 09606‐045 Brazil
AuthorAffiliation_xml – name: 1 Embrapa Agroenergy Brasília DF 70770901 Brazil
– name: 3 Department of Biochemistry State University of Maringá Maringá, Paraná 87020‐900 Brazil
– name: 5 Programa de Processos Tecnológicos e Ambientais Universidade de Sorocaba (UNISO) Sorocaba 18060‐000 Brazil
– name: 8 Department of Biochemistry University of Wisconsin Madison WI 537 USA
– name: 4 Brazilian Bioethanol Science and Technology Laboratory Brazilian Center for Research in Energy and Materials Campinas, Sao Paulo 13083‐100 Brazil
– name: 6 Centre of Natural Sciences and Humanities Federal University of ABC São Bernardo do Campo SP 09606‐045 Brazil
– name: 9 Department of Energy's Great Lakes Bioenergy Research Center Wisconsin Energy Institute University of Wisconsin Madison WI 537 USA
– name: 7 Department of Plant Physiology and Biochemistry Institute of Botany Sao Paulo 04301‐012, 04301‐902 Brazil
– name: 2 Plant Sciences Rothamsted Research Harpenden, Hertfordshire AL5 2JQ UK
Author_xml – sequence: 1
  givenname: Wagner R.
  surname: Souza
  fullname: Souza, Wagner R.
  organization: Embrapa Agroenergy
– sequence: 2
  givenname: Polyana K.
  surname: Martins
  fullname: Martins, Polyana K.
  organization: Embrapa Agroenergy
– sequence: 3
  givenname: Jackie
  surname: Freeman
  fullname: Freeman, Jackie
  organization: Rothamsted Research
– sequence: 4
  givenname: Till K.
  surname: Pellny
  fullname: Pellny, Till K.
  organization: Rothamsted Research
– sequence: 5
  givenname: Louise V.
  surname: Michaelson
  fullname: Michaelson, Louise V.
  organization: Rothamsted Research
– sequence: 6
  givenname: Bruno L.
  surname: Sampaio
  fullname: Sampaio, Bruno L.
  organization: Embrapa Agroenergy
– sequence: 7
  givenname: Felipe
  surname: Vinecky
  fullname: Vinecky, Felipe
  organization: Embrapa Agroenergy
– sequence: 8
  givenname: Ana P.
  surname: Ribeiro
  fullname: Ribeiro, Ana P.
  organization: Embrapa Agroenergy
– sequence: 9
  givenname: Barbara A. D. B.
  surname: Cunha
  fullname: Cunha, Barbara A. D. B.
  organization: Embrapa Agroenergy
– sequence: 10
  givenname: Adilson K.
  surname: Kobayashi
  fullname: Kobayashi, Adilson K.
  organization: Embrapa Agroenergy
– sequence: 11
  givenname: Patricia A.
  surname: Oliveira
  fullname: Oliveira, Patricia A.
  organization: Embrapa Agroenergy
– sequence: 12
  givenname: Raquel B.
  surname: Campanha
  fullname: Campanha, Raquel B.
  organization: Embrapa Agroenergy
– sequence: 13
  givenname: Thályta F.
  surname: Pacheco
  fullname: Pacheco, Thályta F.
  organization: Embrapa Agroenergy
– sequence: 14
  givenname: Danielly C. I.
  surname: Martarello
  fullname: Martarello, Danielly C. I.
  organization: State University of Maringá
– sequence: 15
  givenname: Rogério
  surname: Marchiosi
  fullname: Marchiosi, Rogério
  organization: State University of Maringá
– sequence: 16
  givenname: Osvaldo
  surname: Ferrarese‐Filho
  fullname: Ferrarese‐Filho, Osvaldo
  organization: State University of Maringá
– sequence: 17
  givenname: Wanderley D.
  surname: Santos
  fullname: Santos, Wanderley D.
  organization: State University of Maringá
– sequence: 18
  givenname: Robson
  surname: Tramontina
  fullname: Tramontina, Robson
  organization: Brazilian Center for Research in Energy and Materials
– sequence: 19
  givenname: Fabio M.
  surname: Squina
  fullname: Squina, Fabio M.
  organization: Universidade de Sorocaba (UNISO)
– sequence: 20
  givenname: Danilo C.
  surname: Centeno
  fullname: Centeno, Danilo C.
  organization: Federal University of ABC
– sequence: 21
  givenname: Marília
  surname: Gaspar
  fullname: Gaspar, Marília
  organization: Institute of Botany
– sequence: 22
  givenname: Marcia R.
  surname: Braga
  fullname: Braga, Marcia R.
  organization: Institute of Botany
– sequence: 23
  givenname: Marco A. S.
  surname: Tiné
  fullname: Tiné, Marco A. S.
  organization: Institute of Botany
– sequence: 24
  givenname: John
  surname: Ralph
  fullname: Ralph, John
  organization: University of Wisconsin
– sequence: 25
  givenname: Rowan A. C.
  orcidid: 0000-0002-1412-8828
  surname: Mitchell
  fullname: Mitchell, Rowan A. C.
  email: rowan.mitchell@rothamsted.ac.uk
  organization: Rothamsted Research
– sequence: 26
  givenname: Hugo B. C.
  surname: Molinari
  fullname: Molinari, Hugo B. C.
  email: hugo.molinari@embrapa.br
  organization: Embrapa Agroenergy
BackLink https://www.ncbi.nlm.nih.gov/pubmed/29315591$$D View this record in MEDLINE/PubMed
https://www.osti.gov/servlets/purl/1500216$$D View this record in Osti.gov
BookMark eNp9Uk1vEzEQtVARTQMHfgDIggtIpLXXa3t9QSrlI0gVIBUkbpbXO5s42tjB3m2Vv8EvxkmaCCpRH2zZ896beeM5QUc-eEDoKSWnNK8zv5qf0lJJ8gCNaCnUpKJMHqERIUU1EaX4eYxOUloQQhQXxSN0XChGOVd0hH5fDatVhJRc8Di02ODk_KwD_O58-h7PwAN2Hl9Bb6Iz-NpF17iErRkSJNyZOIM3OPWmzowGbASzec8MC12Hb0zeWohDF9ad6TcpjG9yeA-sXVialHDjZpB6V7vO9evH6GFrugRPbs8x-vHxw_eL6eTy66fPF-eXE5srJxNVcs4aaVuWb5bVpC0LVVeUNAVryqowxEihRF0CkYWoCWspNbJUilRWSFGyMXq7010N9RIaC76PptOr6JYmrnUwTv8b8W6uZ-Fa80oyVvEs8GInEHLtOlnXg53b4D3YXlOeu09FBr26zRLDryG71EuXNt0xHsKQdEGEZESpbUH3Q6mqFOeS5uxj9PIOdBGG6HO7siCpJCVcbAp8_rfDg7X992fA6x3AxpBShPYAoURvRkvn0dLb0crYszvYbHj7qbk5rruPceM6WP9fWn_5Nt0znu0Yi9SHeGAoQqgS2fcfddHpHg
CitedBy_id crossref_primary_10_1007_s00425_018_2968_9
crossref_primary_10_1016_j_tplants_2022_04_008
crossref_primary_10_1007_s12355_024_01475_0
crossref_primary_10_1016_j_copbio_2019_02_013
crossref_primary_10_1039_C9NP00028C
crossref_primary_10_3389_fpls_2019_01275
crossref_primary_10_1093_pcp_pcae028
crossref_primary_10_3389_fpls_2023_1116995
crossref_primary_10_1016_j_renene_2019_10_020
crossref_primary_10_1016_j_plantsci_2022_111476
crossref_primary_10_1007_s00425_021_03794_y
crossref_primary_10_1007_s12298_022_01226_z
crossref_primary_10_1016_j_ijbiomac_2024_138866
crossref_primary_10_1016_j_cpb_2024_100333
crossref_primary_10_1186_s13068_021_01905_1
crossref_primary_10_1016_j_stress_2024_100519
crossref_primary_10_1038_s41598_019_56070_1
crossref_primary_10_1111_pbi_13150
crossref_primary_10_3389_fpls_2024_1343097
crossref_primary_10_1111_pbi_13393
crossref_primary_10_1016_j_plaphy_2020_03_053
crossref_primary_10_1093_plphys_kiac450
crossref_primary_10_1111_tpj_15046
crossref_primary_10_1111_tpj_17148
crossref_primary_10_3389_fpls_2024_1419796
crossref_primary_10_1007_s00425_022_03970_8
crossref_primary_10_1111_tpj_13988
crossref_primary_10_1016_j_plaphy_2022_02_018
crossref_primary_10_1038_s41438_021_00461_x
crossref_primary_10_1007_s13399_021_01291_6
crossref_primary_10_1002_cssc_201903345
crossref_primary_10_1186_s13068_021_02068_9
crossref_primary_10_1007_s13562_020_00561_0
crossref_primary_10_1111_tpj_13984
crossref_primary_10_3389_fpls_2022_892736
crossref_primary_10_1093_plphys_kiad665
crossref_primary_10_3389_fpls_2022_926300
crossref_primary_10_1021_acssuschemeng_3c01320
crossref_primary_10_1093_plphys_kiad267
crossref_primary_10_1111_nph_16603
crossref_primary_10_1080_21645698_2024_2325181
crossref_primary_10_3389_fpls_2021_626168
crossref_primary_10_1093_plphys_kiad549
crossref_primary_10_1186_s12870_019_2135_x
crossref_primary_10_1016_j_plaphy_2020_08_046
crossref_primary_10_1111_nph_19624
crossref_primary_10_1038_s41477_024_01781_1
crossref_primary_10_1093_jxb_erae295
crossref_primary_10_1007_s13399_021_01842_x
crossref_primary_10_1186_s40168_020_00964_0
crossref_primary_10_3389_fpls_2023_1095862
crossref_primary_10_1186_s13068_020_01841_6
crossref_primary_10_1111_tpj_14968
crossref_primary_10_1371_journal_pone_0315950
crossref_primary_10_1007_s12042_021_09283_6
crossref_primary_10_1111_gcbb_12533
crossref_primary_10_1016_j_phytochem_2019_112219
crossref_primary_10_1111_pbi_14186
crossref_primary_10_3390_plants12040737
crossref_primary_10_5511_plantbiotechnology_19_1125a
crossref_primary_10_1021_acs_jafc_4c02915
crossref_primary_10_1002_fes3_163
crossref_primary_10_1016_j_cj_2021_05_008
crossref_primary_10_1111_nph_15052
crossref_primary_10_1186_s13068_019_1450_7
crossref_primary_10_1016_j_plaphy_2019_07_015
crossref_primary_10_1093_aob_mcab101
crossref_primary_10_1111_tpj_15620
crossref_primary_10_3389_fpls_2019_00176
crossref_primary_10_1016_j_procbio_2019_11_024
crossref_primary_10_1111_pce_13805
crossref_primary_10_1007_s11103_019_00897_9
crossref_primary_10_1007_s00253_023_12571_8
crossref_primary_10_1111_tpj_15939
crossref_primary_10_3389_fpls_2023_1218914
crossref_primary_10_1007_s11105_020_01242_x
crossref_primary_10_1016_j_biombioe_2022_106684
crossref_primary_10_1021_acs_jafc_8b01618
crossref_primary_10_1016_j_copbio_2018_10_010
crossref_primary_10_1038_s41477_024_01787_9
crossref_primary_10_1111_nph_15537
crossref_primary_10_3389_fpls_2022_1088879
crossref_primary_10_1093_aob_mcaa063
crossref_primary_10_1371_journal_pone_0240369
Cites_doi 10.1038/srep28348
10.1007/s11101-009-9146-4
10.1007/s00425-015-2430-1
10.3389/fpls.2013.00050
10.1038/nature08747
10.1038/nmeth.2251
10.1073/pnas.1323926111
10.1371/journal.pone.0110000
10.1146/annurev-arplant-042809-112315
10.1093/bioinformatics/btp698
10.1021/bk-1998-0697.ch016
10.1039/p19920002961
10.1016/S0031-9422(03)00301-7
10.1111/j.1467-7652.2007.00317.x
10.1104/pp.112.208694
10.1104/pp.15.01877
10.1093/mp/ssp067
10.1016/0008-6215(95)00237-N
10.1111/tpj.12420
10.1111/tpj.12510
10.1021/acs.biomac.7b01223
10.1186/2047-217X-3-17
10.1111/pbi.12292
10.1007/s00425-009-1077-1
10.1007/s00425-017-2685-9
10.1016/j.btre.2015.02.002
10.1016/0008-6215(95)00053-V
10.1002/(SICI)1097-0010(199806)77:2<193::AID-JSFA25>3.0.CO;2-A
10.1016/S0168-9452(97)00130-1
10.1093/bioinformatics/btp616
10.1007/s00299-007-0472-y
10.1002/jms.698
10.1007/s11101-009-9141-9
10.1073/pnas.1202079109
10.1104/pp.106.094995
10.1111/tpj.12053
10.3389/fpls.2015.00446
10.1073/pnas.1701894114
10.1111/j.1469-8137.2004.00980.x
10.1093/nar/gkr944
10.1016/j.anifeedsci.2005.05.015
10.1023/B:PHYT.0000047811.13837.fb
10.1093/sysbio/syq010
10.1104/pp.111.189191
10.1074/jbc.M111.284497
10.1073/pnas.1115858109
10.1126/sciadv.1600393
10.1111/pbi.12016
10.1039/B916070A
10.1111/pbi.12727
10.1038/nbt.2196
10.2135/cropsci1990.0011183X003000050005x
10.1007/BF00201809
10.1007/BF02670468
10.1002/(SICI)1097-0010(199809)78:1<81::AID-JSFA86>3.0.CO;2-N
10.1016/S0031-9422(96)00649-8
ContentType Journal Article
Copyright Copyright © 2018 New Phytologist Trust
2017 The Authors. New Phytologist © 2017 New Phytologist Trust
2017 The Authors. New Phytologist © 2017 New Phytologist Trust.
Copyright_xml – notice: Copyright © 2018 New Phytologist Trust
– notice: 2017 The Authors. New Phytologist © 2017 New Phytologist Trust
– notice: 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.
CorporateAuthor Univ. of Wisconsin, Madison, WI (United States)
CorporateAuthor_xml – name: Univ. of Wisconsin, Madison, WI (United States)
DBID 24P
AAYXX
CITATION
NPM
7QO
7SN
8FD
C1K
F1W
FR3
H95
L.G
M7N
P64
RC3
7X8
7S9
L.6
OIOZB
OTOTI
5PM
DOI 10.1111/nph.14970
DatabaseName Wiley Online Library Open Access
CrossRef
PubMed
Biotechnology Research Abstracts
Ecology Abstracts
Technology Research Database
Environmental Sciences and Pollution Management
ASFA: Aquatic Sciences and Fisheries Abstracts
Engineering Research Database
Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources
Aquatic Science & Fisheries Abstracts (ASFA) Professional
Algology Mycology and Protozoology Abstracts (Microbiology C)
Biotechnology and BioEngineering Abstracts
Genetics Abstracts
MEDLINE - Academic
AGRICOLA
AGRICOLA - Academic
OSTI.GOV - Hybrid
OSTI.GOV
PubMed Central (Full Participant titles)
DatabaseTitle CrossRef
PubMed
Aquatic Science & Fisheries Abstracts (ASFA) Professional
Genetics Abstracts
Biotechnology Research Abstracts
Technology Research Database
Algology Mycology and Protozoology Abstracts (Microbiology C)
ASFA: Aquatic Sciences and Fisheries Abstracts
Engineering Research Database
Ecology Abstracts
Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources
Biotechnology and BioEngineering Abstracts
Environmental Sciences and Pollution Management
MEDLINE - Academic
AGRICOLA
AGRICOLA - Academic
DatabaseTitleList
PubMed

AGRICOLA
CrossRef
MEDLINE - Academic

Aquatic Science & Fisheries Abstracts (ASFA) Professional
Database_xml – sequence: 1
  dbid: 24P
  name: Wiley Online Library Open Access
  url: https://authorservices.wiley.com/open-science/open-access/browse-journals.html
  sourceTypes: Publisher
– sequence: 2
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Botany
EISSN 1469-8137
EndPage 93
ExternalDocumentID PMC5873385
1500216
29315591
10_1111_nph_14970
NPH14970
90019617
Genre article
Research Support, Non-U.S. Gov't
Journal Article
GrantInformation_xml – fundername: FAPESP
  funderid: 2016/07926‐4
– fundername: Improvement of Higher Education Personnel (CAPES‐Embrapa) and Embrapa Macroprogram SEG
  funderid: 02.12.01.008.00.00; BB/K013335/1; BBSRC‐GCRF‐IAA/RIA‐6; BB/K007599/1
– fundername: Great Lakes Bioenergy Research Center
  funderid: DE‐FC02‐07ER64494
– fundername: UK Biotechnology and Biosciences Research Council
– fundername: FAPESP
  grantid: 2016/07926‐4
– fundername: Improvement of Higher Education Personnel (CAPES‐Embrapa) and Embrapa Macroprogram SEG
  grantid: 02.12.01.008.00.00; BB/K013335/1; BBSRC‐GCRF‐IAA/RIA‐6; BB/K007599/1
– fundername: Great Lakes Bioenergy Research Center
  grantid: DE‐FC02‐07ER64494
GroupedDBID ---
-~X
.3N
.GA
05W
0R~
10A
123
1OC
29N
2WC
33P
36B
3SF
4.4
50Y
50Z
51W
51X
52M
52N
52O
52P
52S
52T
52U
52W
52X
53G
5HH
5LA
5VS
66C
702
79B
7PT
8-0
8-1
8-3
8-4
8-5
85S
8UM
930
A03
AAESR
AAEVG
AAHBH
AAHKG
AAHQN
AAISJ
AAKGQ
AAMMB
AAMNL
AANLZ
AAONW
AASGY
AAXRX
AAYCA
AAZKR
ABBHK
ABCQN
ABCUV
ABLJU
ABPLY
ABPVW
ABSQW
ABTLG
ABVKB
ABXSQ
ACAHQ
ACCZN
ACFBH
ACGFS
ACHIC
ACNCT
ACPOU
ACSCC
ACSTJ
ACXBN
ACXQS
ADBBV
ADEOM
ADIZJ
ADKYN
ADMGS
ADOZA
ADULT
ADXAS
ADZMN
AEFGJ
AEIGN
AEIMD
AENEX
AEUPB
AEUYR
AEYWJ
AFAZZ
AFBPY
AFEBI
AFFPM
AFGKR
AFWVQ
AFZJQ
AGHNM
AGUYK
AGXDD
AGYGG
AHBTC
AHXOZ
AIDQK
AIDYY
AILXY
AITYG
AIURR
AJXKR
ALAGY
ALMA_UNASSIGNED_HOLDINGS
ALUQN
ALVPJ
AMBMR
AMYDB
AQVQM
ATUGU
AUFTA
AZBYB
AZVAB
BAFTC
BAWUL
BFHJK
BHBCM
BMNLL
BMXJE
BNHUX
BROTX
BRXPI
BY8
CBGCD
CS3
CUYZI
D-E
D-F
DCZOG
DEVKO
DIK
DPXWK
DR2
DRFUL
DRSTM
E3Z
EBS
ECGQY
EJD
F00
F01
F04
F5P
G-S
G.N
GODZA
H.T
H.X
HGLYW
HZI
HZ~
IHE
IPSME
IX1
J0M
JAAYA
JBMMH
JBS
JEB
JENOY
JHFFW
JKQEH
JLS
JLXEF
JPM
JST
K48
LATKE
LC2
LC3
LEEKS
LH4
LITHE
LOXES
LP6
LP7
LUTES
LW6
LYRES
MEWTI
MK4
MRFUL
MRSTM
MSFUL
MSSTM
MXFUL
MXSTM
N04
N05
N9A
NF~
O66
O9-
OIG
OK1
P2P
P2W
P2X
P4D
Q.N
Q11
QB0
R.K
RIG
ROL
RX1
SA0
SUPJJ
TN5
TR2
UB1
W8V
W99
WBKPD
WIH
WIK
WIN
WNSPC
WOHZO
WQJ
WXSBR
WYISQ
XG1
YNT
YQT
ZZTAW
~02
~IA
~KM
~WT
.Y3
24P
31~
AAHHS
AASVR
ABEFU
ABEML
ACCFJ
ACQPF
AEEZP
AEQDE
AEUQT
AFPWT
AIWBW
AJBDE
AS~
CAG
COF
DOOOF
ESX
FIJ
GTFYD
HF~
HGD
HQ2
HTVGU
IPNFZ
JSODD
LPU
MVM
NEJ
RCA
WHG
WRC
XOL
YXE
ZCG
AAYXX
ABGDZ
ADXHL
CITATION
NPM
PKN
7QO
7SN
8FD
C1K
F1W
FR3
H95
L.G
M7N
P64
RC3
7X8
7S9
L.6
AAPBV
ABHUG
ABPTK
ABWRO
ACXME
ADAWD
ADDAD
ADZLD
AESBF
AFVGU
AGJLS
CWIXF
DWIUU
LW7
OIOZB
OTOTI
UMP
5PM
ID FETCH-LOGICAL-c5910-94553d7cf3910c3b0f429b810d23d482a0a7696b4e0726b03f11a749908c67643
IEDL.DBID DR2
ISSN 0028-646X
1469-8137
IngestDate Thu Aug 21 13:56:32 EDT 2025
Fri May 19 00:51:11 EDT 2023
Fri Jul 11 18:36:33 EDT 2025
Fri Jul 11 09:06:52 EDT 2025
Sun Jul 13 04:38:30 EDT 2025
Wed Feb 19 02:33:50 EST 2025
Thu Apr 24 23:13:09 EDT 2025
Tue Jul 01 03:09:27 EDT 2025
Wed Jan 22 16:47:03 EST 2025
Thu Jul 03 22:16:39 EDT 2025
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 1
Keywords grass evolution
lignocellulosic feedstock
cell wall acylation
ferulic acid
hydroxycinnamates
Language English
License Attribution
http://creativecommons.org/licenses/by/4.0
2017 The Authors. New Phytologist © 2017 New Phytologist Trust.
This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c5910-94553d7cf3910c3b0f429b810d23d482a0a7696b4e0726b03f11a749908c67643
Notes 218
5–7
Gómez & McQueen‐Mason
See also the Commentary on this article by
.
ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 14
content type line 23
USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
FC02-07ER64494
These authors contributed equally to this work.
See also the Commentary on this article by Gómez & McQueen‐Mason, 218: 5–7.
ORCID 0000-0002-1412-8828
0000000214128828
OpenAccessLink https://proxy.k.utb.cz/login?url=https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fnph.14970
PMID 29315591
PQID 2008710565
PQPubID 2026848
PageCount 13
ParticipantIDs pubmedcentral_primary_oai_pubmedcentral_nih_gov_5873385
osti_scitechconnect_1500216
proquest_miscellaneous_2067309964
proquest_miscellaneous_1989557173
proquest_journals_2008710565
pubmed_primary_29315591
crossref_primary_10_1111_nph_14970
crossref_citationtrail_10_1111_nph_14970
wiley_primary_10_1111_nph_14970_NPH14970
jstor_primary_90019617
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate April 2018
PublicationDateYYYYMMDD 2018-04-01
PublicationDate_xml – month: 04
  year: 2018
  text: April 2018
PublicationDecade 2010
PublicationPlace England
PublicationPlace_xml – name: England
– name: Lancaster
– name: United States
– name: Hoboken
PublicationTitle The New phytologist
PublicationTitleAlternate New Phytol
PublicationYear 2018
Publisher New Phytologist Trust
Wiley Subscription Services, Inc
Wiley
John Wiley and Sons Inc
Publisher_xml – name: New Phytologist Trust
– name: Wiley Subscription Services, Inc
– name: Wiley
– name: John Wiley and Sons Inc
References 2010; 59
2013; 4
2012; 287
1997; 44
2007; 144
2004; 161
2004; 3
2010; 463
2008; 6
2013; 161
2017; 114
2010; 61
2010; 26
2014; 3
2013; 11
2013; 10
2004; 39
2008; 27
2010; 231
2014; 9
2017; 246
1992; 1
2006; 125
2010; 9
2010; 8
2015; 13
1990; 30
2015; 6
2012
1994; 193
1998
2016; 243
1995; 275
2014; 111
1995; 272
2012; 109
2012; 30
1998a; 77
2016; 6
1997; 127
2016; 2
2017; 15
2013; 73
1993; 11
1998b; 78
2017; 18
2012; 158
2009; 2
2016; 170
2003; 64
2014; 78
2014; 77
2012; 40
e_1_2_7_5_1
e_1_2_7_3_1
e_1_2_7_9_1
e_1_2_7_7_1
e_1_2_7_19_1
e_1_2_7_17_1
e_1_2_7_15_1
e_1_2_7_41_1
e_1_2_7_13_1
e_1_2_7_43_1
e_1_2_7_11_1
e_1_2_7_45_1
e_1_2_7_47_1
e_1_2_7_26_1
e_1_2_7_49_1
e_1_2_7_50_1
e_1_2_7_25_1
e_1_2_7_31_1
e_1_2_7_52_1
e_1_2_7_23_1
e_1_2_7_33_1
e_1_2_7_54_1
e_1_2_7_21_1
e_1_2_7_35_1
e_1_2_7_56_1
e_1_2_7_37_1
e_1_2_7_58_1
e_1_2_7_39_1
e_1_2_7_6_1
e_1_2_7_4_1
e_1_2_7_8_1
e_1_2_7_18_1
e_1_2_7_16_1
e_1_2_7_40_1
e_1_2_7_2_1
e_1_2_7_14_1
e_1_2_7_42_1
e_1_2_7_12_1
e_1_2_7_44_1
e_1_2_7_10_1
e_1_2_7_46_1
e_1_2_7_48_1
e_1_2_7_27_1
e_1_2_7_29_1
Martins PK (e_1_2_7_28_1) 2016; 6
e_1_2_7_51_1
e_1_2_7_30_1
e_1_2_7_53_1
e_1_2_7_24_1
e_1_2_7_32_1
e_1_2_7_55_1
e_1_2_7_22_1
e_1_2_7_34_1
e_1_2_7_57_1
e_1_2_7_20_1
e_1_2_7_36_1
e_1_2_7_38_1
29488282 - New Phytol. 2018 Apr;218(1):5-7
References_xml – volume: 9
  start-page: 19
  year: 2010
  end-page: 33
  article-title: The distribution of ester‐linked ferulic acid in the cell walls of angiosperms
  publication-title: Phytochemistry Reviews
– volume: 13
  start-page: 1224
  year: 2015
  end-page: 1232
  article-title: Ferulic acid: a key component in grass lignocellulose recalcitrance to hydrolysis
  publication-title: Plant Biotechnology Journal
– volume: 6
  start-page: 41
  year: 2015
  end-page: 44
  article-title: A simple and highly efficient ‐mediated transformation protocol for
  publication-title: Biotechnology Reports
– volume: 161
  start-page: 1615
  year: 2013
  end-page: 1633
  article-title: Overexpression of a BAHD acyltransferase, , alters rice cell wall hydroxycinnamic acid content and saccharification
  publication-title: Plant Physiology
– volume: 73
  start-page: 496
  year: 2013
  end-page: 508
  article-title: Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in
  publication-title: Plant Journal
– volume: 144
  start-page: 43
  year: 2007
  end-page: 53
  article-title: A novel bioinformatics approach identifies candidate genes for the synthesis and feruloylation of arabinoxylan
  publication-title: Plant Physiology
– volume: 44
  start-page: 1019
  year: 1997
  end-page: 1030
  article-title: 2‐ ‐beta‐ ‐xylopyranosyl‐(5‐ ‐feruloyl)‐ ‐arabinose, a widespread component of grass cell walls
  publication-title: Phytochemistry
– volume: 30
  start-page: 985
  year: 1990
  end-page: 989
  article-title: Diazonium compounds localize grass cell wall phenolics: relation to wall digestibility
  publication-title: Crop Science
– volume: 78
  start-page: 81
  year: 1998b
  end-page: 87
  article-title: Severe inhibition of maize wall degradation by synthetic lignins formed with coniferaldehyde
  publication-title: Journal of the Science of Food and Agriculture
– start-page: 209
  year: 1998
  end-page: 236
– volume: 170
  start-page: 1358
  year: 2016
  end-page: 1366
  article-title: Structural redesigning Arabidopsis lignins into alkali‐soluble lignins through the expression of p‐coumaroyl‐coA: monolignol transferase PMT
  publication-title: Plant Physiology
– volume: 275
  start-page: 167
  year: 1995
  end-page: 178
  article-title: Lignin‐ferulate cross‐links in grasses: active incorporation of ferulate polysaccharide esters into ryegrass lignins
  publication-title: Carbohydrate Research
– volume: 9
  start-page: 65
  year: 2010
  end-page: 83
  article-title: Hydroxycinnamates in lignification
  publication-title: Phytochemistry Reviews
– volume: 3
  start-page: 79
  year: 2004
  end-page: 96
  article-title: Peroxidase‐dependent cross‐linking reactions of ‐hydroxycinnamates in plant cell walls
  publication-title: Phytochemistry Reviews
– volume: 77
  start-page: 193
  year: 1998a
  end-page: 200
  article-title: Diferulate cross‐links impede the enzymatic degradation of non‐lignified maize walls
  publication-title: Journal of the Science of Food and Agriculture
– volume: 27
  start-page: 471
  year: 2008
  end-page: 478
  article-title: High‐efficiency ‐mediated transformation of inbred line Bd21‐3
  publication-title: Plant Cell Reports
– volume: 111
  start-page: E4859
  year: 2014
  end-page: E4868
  article-title: Phylotranscriptomic analysis of the origin and early diversification of land plants
  publication-title: Proceedings of the National Academy of Sciences, USA
– volume: 10
  start-page: 71
  year: 2013
  end-page: 73
  article-title: Streaming fragment assignment for real‐time analysis of sequencing experiments
  publication-title: Nature Methods
– volume: 463
  start-page: 763
  year: 2010
  end-page: 768
  article-title: Genome sequencing and analysis of the model grass
  publication-title: Nature
– volume: 1
  start-page: 2961
  year: 1992
  end-page: 2969
  article-title: Lignin feruloyl ester cross‐cinks in grasses. 1. Incorporation of feruloyl esters into coniferyl alcohol dehydrogenation polymers
  publication-title: Journal of the Chemical Society, Perkin Transactions
– volume: 287
  start-page: 8347
  year: 2012
  end-page: 8355
  article-title: Identification of grass‐specific enzyme that acylates monolignols with ‐coumarate
  publication-title: Journal of Biological Chemistry
– volume: 77
  start-page: 713
  year: 2014
  end-page: 726
  article-title: ‐Coumaroyl‐CoA: monolignol transferase (PMT) acts specifically in the lignin biosynthetic pathway in
  publication-title: Plant Journal
– volume: 243
  start-page: 659
  year: 2016
  end-page: 674
  article-title: Functional testing of a PF02458 homologue of putative rice arabinoxylan feruloyl transferase genes in
  publication-title: Planta
– volume: 4
  start-page: 50
  year: 2013
  article-title: Grass cell wall feruloylation: distribution of bound ferulate and candidate gene expression in
  publication-title: Frontiers in Plant Science
– volume: 272
  start-page: 241
  year: 1995
  end-page: 253
  article-title: Isolation and partial characterization of feruloylated oligosaccharides from maize bran
  publication-title: Carbohydrate Research
– volume: 6
  start-page: 264
  year: 2008
  end-page: 280
  article-title: Expression of a fungal ferulic acid esterase increases cell wall digestibility of tall fescue ( )
  publication-title: Plant Biotechnology Journal
– volume: 161
  start-page: 641
  year: 2004
  end-page: 675
  article-title: Primary cell wall metabolism: tracking the careers of wall polymers in living plant cells
  publication-title: New Phytologist
– volume: 9
  start-page: e110000
  year: 2014
  article-title: The acetyl bromide method is faster, simpler and presents best recovery of lignin in different herbaceous tissues than Klason and thioglycolic acid methods
  publication-title: PLoS ONE
– volume: 6
  start-page: 446
  year: 2015
  article-title: Cell wall composition and digestibility alterations in achieved through reduced expression of the UDP‐arabinopyranose mutase
  publication-title: Frontiers in Plant Science
– volume: 6
  start-page: 28348
  year: 2016
  article-title: Selection of reliable reference genes for RT‐qPCR analysis during developmental stages and abiotic stress in
  publication-title: Scientific Reports
– volume: 158
  start-page: 612
  year: 2012
  end-page: 627
  article-title: Cell walls of developing wheat starchy endosperm: comparison of composition and RNA‐seq transcriptome
  publication-title: Plant Physiology
– volume: 193
  start-page: 326
  year: 1994
  end-page: 330
  article-title: Intraprotoplasmic feruloylation of arabinoxylans in cell cultures
  publication-title: Planta
– volume: 125
  start-page: 151
  year: 2006
  end-page: 161
  article-title: Relationships of fibre, lignin, and phenolics to fibre digestibility in three perennial grasses
  publication-title: Animal Feed Science and Technology
– volume: 11
  start-page: 325
  year: 2013
  end-page: 335
  article-title: Engineering secondary cell wall deposition in plants
  publication-title: Plant Biotechnology Journal
– volume: 61
  start-page: 263
  year: 2010
  end-page: 289
  article-title: Hemicelluloses
  publication-title: Annual Review of Plant Biology
– volume: 78
  start-page: 850
  year: 2014
  end-page: 864
  article-title: Identification and suppression of the p‐coumaroyl CoA: hydroxycinnamyl alcohol transferase in L
  publication-title: Plant Journal
– volume: 109
  start-page: 17117
  year: 2012
  end-page: 17122
  article-title: XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan
  publication-title: Proceedings of the National Academy of Sciences, USA
– volume: 3
  start-page: 17
  year: 2014
  article-title: Data access for the 1,000 Plants (1KP) project
  publication-title: Gigascience
– volume: 8
  start-page: 576
  year: 2010
  end-page: 591
  article-title: Solution‐state 2D NMR of ball‐milled plant cell wall gels in DMSO‐d /pyridine‐d
  publication-title: Organic & Biomolecular Chemistry
– volume: 127
  start-page: 111
  year: 1997
  end-page: 127
  article-title: Structure and functions of feruloylated polysaccharides
  publication-title: Plant Science
– volume: 114
  start-page: 4261
  year: 2017
  end-page: 4266
  article-title: The elaborate route for UDP‐arabinose delivery into the Golgi of plants
  publication-title: Proceedings of the National Academy of Sciences, USA
– volume: 109
  start-page: 989
  year: 2012
  end-page: 993
  article-title: Glycosyl transferases in family 61 mediate arabinofuranosyl transfer onto xylan in grasses
  publication-title: Proceedings of the National Academy of Sciences, USA
– volume: 26
  start-page: 589
  year: 2010
  end-page: 595
  article-title: Fast and accurate long‐read alignment with Burrows‐Wheeler transform
  publication-title: Bioinformatics
– volume: 246
  start-page: 61
  year: 2017
  end-page: 74
  article-title: Screening of rice mutants with improved saccharification efficiency results in the identification of CONSTITUTIVE PHOTOMORPHOGENIC 1 and GOLD HULL AND INTERNODE 1
  publication-title: Planta
– year: 2012
– volume: 30
  start-page: 555
  year: 2012
  end-page: 561
  article-title: Reference genome sequence of the model plant
  publication-title: Nature Biotechnology
– volume: 2
  start-page: 1
  year: 2016
  end-page: 9
  article-title: Monolignol ferulate conjugates are naturally incorporated into plant lignins
  publication-title: Science Advances
– volume: 26
  start-page: 139
  year: 2010
  end-page: 140
  article-title: edgeR: a bioconductor package for differential expression analysis of digital gene expression data
  publication-title: Bioinformatics
– volume: 39
  start-page: 1153
  year: 2004
  end-page: 1160
  article-title: Evidence for linkage position determination in known feruloylated mono‐ and disaccharides using electrospray ion trap mass spectrometry
  publication-title: Journal of Mass Spectrometry
– volume: 2
  start-page: 861
  year: 2009
  end-page: 872
  article-title: Feruloylation in grasses: current and future perspectives
  publication-title: Molecular Plant
– volume: 11
  start-page: 113
  year: 1993
  end-page: 116
  article-title: A simple and efficient method for isolating RNA from pine trees
  publication-title: Plant Molecular Biology Reporter
– volume: 18
  start-page: 4184
  year: 2017
  end-page: 4195
  article-title: Characterization and elimination of undesirable protein residues in plant cell wall materials for enhancing lignin analysis by solution‐state NMR
  publication-title: Biomacromolecules
– volume: 40
  start-page: D1178
  year: 2012
  end-page: D1186
  article-title: Phytozome: a comparative platform for green plant genomics
  publication-title: Nucleic Acids Research
– volume: 59
  start-page: 307
  year: 2010
  end-page: 321
  article-title: New algorithms and methods to estimate maximum‐likelihood phylogenies: assessing the performance of PhyML 3.0
  publication-title: Systematic Biology
– volume: 231
  start-page: 677
  year: 2010
  end-page: 691
  article-title: Down‐regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester‐linked ferulate content in rice cell walls
  publication-title: Planta
– volume: 64
  start-page: 603
  year: 2003
  end-page: 607
  article-title: Hot alkali‐labile linkages in the walls of the forage grass and and their relation to wall digestibility
  publication-title: Phytochemistry
– volume: 15
  start-page: 1429
  year: 2017
  end-page: 1438
  article-title: Feruloylation and structure of arabinoxylan in wheat endosperm cell walls from RNAi lines with suppression of genes responsible for backbone synthesis and decoration
  publication-title: Plant Biotechnology Journal
– volume: 6
  start-page: 28348
  year: 2016
  ident: e_1_2_7_28_1
  article-title: Selection of reliable reference genes for RT‐qPCR analysis during developmental stages and abiotic stress in Setaria viridis
  publication-title: Scientific Reports
  doi: 10.1038/srep28348
– ident: e_1_2_7_19_1
  doi: 10.1007/s11101-009-9146-4
– ident: e_1_2_7_7_1
  doi: 10.1007/s00425-015-2430-1
– ident: e_1_2_7_32_1
  doi: 10.3389/fpls.2013.00050
– ident: e_1_2_7_54_1
  doi: 10.1038/nature08747
– ident: e_1_2_7_47_1
  doi: 10.1038/nmeth.2251
– ident: e_1_2_7_56_1
  doi: 10.1073/pnas.1323926111
– ident: e_1_2_7_33_1
  doi: 10.1371/journal.pone.0110000
– ident: e_1_2_7_50_1
  doi: 10.1146/annurev-arplant-042809-112315
– ident: e_1_2_7_26_1
  doi: 10.1093/bioinformatics/btp698
– ident: e_1_2_7_43_1
  doi: 10.1021/bk-1998-0697.ch016
– ident: e_1_2_7_44_1
  doi: 10.1039/p19920002961
– ident: e_1_2_7_52_1
– ident: e_1_2_7_25_1
  doi: 10.1016/S0031-9422(03)00301-7
– ident: e_1_2_7_8_1
  doi: 10.1111/j.1467-7652.2007.00317.x
– ident: e_1_2_7_4_1
  doi: 10.1104/pp.112.208694
– ident: e_1_2_7_51_1
  doi: 10.1104/pp.15.01877
– ident: e_1_2_7_9_1
  doi: 10.1093/mp/ssp067
– ident: e_1_2_7_42_1
  doi: 10.1016/0008-6215(95)00237-N
– ident: e_1_2_7_37_1
  doi: 10.1111/tpj.12420
– ident: e_1_2_7_27_1
  doi: 10.1111/tpj.12510
– ident: e_1_2_7_23_1
  doi: 10.1021/acs.biomac.7b01223
– ident: e_1_2_7_30_1
  doi: 10.1186/2047-217X-3-17
– ident: e_1_2_7_35_1
  doi: 10.1111/pbi.12292
– ident: e_1_2_7_38_1
  doi: 10.1007/s00425-009-1077-1
– ident: e_1_2_7_20_1
  doi: 10.1007/s00425-017-2685-9
– ident: e_1_2_7_29_1
  doi: 10.1016/j.btre.2015.02.002
– ident: e_1_2_7_49_1
  doi: 10.1016/0008-6215(95)00053-V
– ident: e_1_2_7_16_1
  doi: 10.1002/(SICI)1097-0010(199806)77:2<193::AID-JSFA25>3.0.CO;2-A
– ident: e_1_2_7_21_1
  doi: 10.1016/S0168-9452(97)00130-1
– ident: e_1_2_7_48_1
  doi: 10.1093/bioinformatics/btp616
– ident: e_1_2_7_53_1
  doi: 10.1007/s00299-007-0472-y
– ident: e_1_2_7_39_1
  doi: 10.1002/jms.698
– ident: e_1_2_7_40_1
  doi: 10.1007/s11101-009-9141-9
– ident: e_1_2_7_12_1
  doi: 10.1073/pnas.1202079109
– ident: e_1_2_7_31_1
  doi: 10.1104/pp.106.094995
– ident: e_1_2_7_6_1
  doi: 10.1111/tpj.12053
– ident: e_1_2_7_45_1
  doi: 10.3389/fpls.2015.00446
– ident: e_1_2_7_46_1
  doi: 10.1073/pnas.1701894114
– ident: e_1_2_7_14_1
  doi: 10.1111/j.1469-8137.2004.00980.x
– ident: e_1_2_7_15_1
  doi: 10.1093/nar/gkr944
– ident: e_1_2_7_10_1
  doi: 10.1016/j.anifeedsci.2005.05.015
– ident: e_1_2_7_41_1
  doi: 10.1023/B:PHYT.0000047811.13837.fb
– ident: e_1_2_7_18_1
  doi: 10.1093/sysbio/syq010
– ident: e_1_2_7_36_1
  doi: 10.1104/pp.111.189191
– ident: e_1_2_7_57_1
  doi: 10.1074/jbc.M111.284497
– ident: e_1_2_7_3_1
  doi: 10.1073/pnas.1115858109
– ident: e_1_2_7_22_1
  doi: 10.1126/sciadv.1600393
– ident: e_1_2_7_58_1
  doi: 10.1111/pbi.12016
– ident: e_1_2_7_24_1
  doi: 10.1039/B916070A
– ident: e_1_2_7_13_1
  doi: 10.1111/pbi.12727
– ident: e_1_2_7_5_1
  doi: 10.1038/nbt.2196
– ident: e_1_2_7_2_1
  doi: 10.2135/cropsci1990.0011183X003000050005x
– ident: e_1_2_7_34_1
  doi: 10.1007/BF00201809
– ident: e_1_2_7_11_1
  doi: 10.1007/BF02670468
– ident: e_1_2_7_17_1
  doi: 10.1002/(SICI)1097-0010(199809)78:1<81::AID-JSFA86>3.0.CO;2-N
– ident: e_1_2_7_55_1
  doi: 10.1016/S0031-9422(96)00649-8
– reference: 29488282 - New Phytol. 2018 Apr;218(1):5-7
SSID ssj0009562
Score 2.5348716
Snippet Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass...
Summary Feruloylation of arabinoxylan (AX) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of...
Feruloylation of arabinoxylan ( AX ) in grass cell walls is a key determinant of recalcitrance to enzyme attack, making it a target for improvement of grass...
SourceID pubmedcentral
osti
proquest
pubmed
crossref
wiley
jstor
SourceType Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 81
SubjectTerms AC generators
acyl coenzyme A
Animal nutrition
Arabinose
arabinoxylan
BASIC BIOLOGICAL SCIENCES
Biofuels
Biological evolution
Biomass
biomass production
biorefining
Brachypodium distachyon
cell wall acylation
Cell walls
CoA transferase
Crops
Digestibility
Dimensional changes
evolution
Evolutionary genetics
ferulic acid
Gene expression
Genes
grass evolution
Grasses
hydroxycinnamates
Lignin
lignocellulosic feedstock
NMR
Nuclear magnetic resonance
nuclear magnetic resonance spectroscopy
Nucleic acids
Nutrition
Ribonucleic acid
RNA
RNA interference
RNA-mediated interference
Saccharification
Setaria
Setaria viridis
Stems
transferases
Title Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility
URI https://www.jstor.org/stable/90019617
https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fnph.14970
https://www.ncbi.nlm.nih.gov/pubmed/29315591
https://www.proquest.com/docview/2008710565
https://www.proquest.com/docview/1989557173
https://www.proquest.com/docview/2067309964
https://www.osti.gov/servlets/purl/1500216
https://pubmed.ncbi.nlm.nih.gov/PMC5873385
Volume 218
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwELZKxYEL70JoqQzi0AOp8rKdiFMLVCskqgqotAekyK-oEauk2iStlp_BL2bGeWgXWglxWWXjcR7OjP1N_OUzIW8Ek6HQQvmQT1s_CUPjZ5lmvgVwykym49TiB86fT_nsPPk0Z_Mt8m78FqbXh5heuGFkuP4aA1yqZi3Iq8sLCPNMYL6OXC0ERF-iNcFdHo0KzDzh80FVCFk8U82NsainI0LPXENs3YQ3_6ZNrsNZNx6dPCDfxzvpaSg_DrtWHeqff4g8_uetPiT3B5xKj3rHekS2bPWY3D2uAUuunpBfuBhoz6CtaF1QSfGVw8LS46PZBwo-aWlZ0a-2hUxc0qtyWZqyoVp2jW3oAsnnbynAUgU1jMOtuB9q4DQCvZbwU9hlt6hXPVOPyspA8WiIkgGA-alxk2M9vXf1lJyffPz2fuYPqzv4mgFG8bOEsdgIXcTwT8cqKGBoVGkYmCg2SRrJQAqecZXYQERcBXERhlJAghakmgsAUjtku6or-5xQkUgjOByNF0EiFVeZiQG3hhmLoKoRHjkYn3OuB-lzXIFjkY8pELRw7lrYI68n08te7-Mmox3nLJNF5mSGQjjRLnpPDugFJXg1cpV0mwPoBijFPbI3OlU-9BSNWwYUUB7gao-8moohxrHFZWXrrsmR18YY8iVut0EZ_hjgPk888qz30-nyANLh7HPoEbHhwZMBaoxvllTlhdMaZ6mI4xSu7cA56O1tkp-ezdzGi3833SX3AH-mPRFqj2y3y86-BIzXqn1yJ0rO9l1I_wZjuk3N
linkProvider Wiley-Blackwell
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMw1V3dbtMwFLbGQIIb_sfCBhgE0i7IlD_byQUXG2Xq2FYh2KTeBcd2tGpVMjUtU3kMnoNX4Z04x_lRC5vEzS64qdr6JLFsH_s79pfvEPJaMOkLJTIX4mnjRr6v3SRRzDUATplOVBgbfMH5aMD7J9HHIRuukJ_tuzC1PkS34YaeYedrdHDckF7w8uL8FPw8EV5DqTww8wsI2Kp3-z3o3TdBsPfh-H3fbXIKuIrByugmEWOhFioP4ZcKMy-HCTmLfU8HoY7iQHpS8IRnkfFEwDMvzH1fCggLvFhxAcs33PcGuYkZxFGpv_c5WJD45UGr-cwjPmx0jJA31FV1afWrCZCwFpTgzZch3L-JmosA2q6Ae_fIr7btauLL2fZsmm2r73_ISv4vjXuf3G2gON2pfecBWTHFQ3JrtwS4PH9EfmC-05okXNAyp5LirsrY0N2dfo-C2xk6KugXM5XgwvTbaDLSo4oqOatMRcfIr39LAXlncIW20Bz_hyvwpIReSPjIzWQ2Luc1GZHKQkNxa4iqCBDWUG3P_2oG8_wxObmW9lgjq0VZmHVCRSS14HA3nnuRzHiW6BCguZ-wAC7VwiFb7cBKVaPujklGxmkb5UGPprZHHfKqMz2vJU0uM1qzo7OzSKySkg8P2sDhmgJAQ5VhhXQsNU0hrgC0yB2y2Y7itJkMK5vpFIAshA4OedkVwzSGLS4LU86qFKl7jCEl5GobzDQQQkTDI4c8qR2jqx6gVjxg9x0illymM0AZ9eWSYnRq5dRZLMIwhrptWY-4uk3Swae-_fL0301fkNv946PD9HB_cLBB7gDcjmve1yZZnU5m5hlA2mn23M4klHy9bu_6DQaMpjo
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1bb9MwFLbGQIgXxG0jbIBBIO2BSLnZTh542ChVx6CqBJP6Fhzb0SJVSdW0m_o39jf4k5zjXNSKTeJlL1FTHydWjo_9nfjLZ0I-CCZ9oUTmQj5t3Mj3tZskirkGwCnTiQpjgx84_xjz0Xn0bcqmO-RP9y1Mow_Rv3DDyLDjNQb4XOcbQV7OLyDME-G1jMozs76CfK3-fDoA534MguHXX19GbrulgKsYTIxuEjEWaqHyEM5UmHk5jMdZ7Hs6CHUUB9KTgic8i4wnAp55Ye77UkBW4MWKC5i94br3yH1cXET-WBBNNhR-edBJPvOIT1sZI6QN9U3dmvwa_iNMBRUE800A91-e5iZ-thPg8Al53CJXetx0tadkx5TPyIOTCtDl-jm5xu1BG05tSaucSoovIWaGnhyPBhR6qaFFSX-aJeTmkl4Wi0IXNVVyVZuazpCO_okCUM2ghrZIFv-HGriwQK8kHHKzWM2qdcPdo7LUUNwZoogAZAFU2-WyhvC7fkHO78Q5e2S3rErzklARSS04XI3nXiQzniU6BCTrJyyAqlo45KhzRKpaMXTck2OWdkkR-Cy1PnPI-9503iiA3GS0Z73ZWyRWeMiHGx2ge1PAMyjKq5C9pJYpwHAAV9whh53X03bsqO3GoID7AGk75F1fDFGPT1yWplrVKTLdGEMGxe02KMwfQgLAI4fsNx2pbx6APFyP9h0itrpYb4Cq49slZXFh1cdZLMIwhrYd2c54-zNJx5OR_fHq_03fkoeTwTD9fjo-OyCPAJzGDUvqkOwuFyvzGgDgMntjA4-S33cd6X8BmhNmNg
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Suppression+of+a+single+BAHD+gene+in+Setaria+viridis+causes+large%2C+stable+decreases+in+cell+wall+feruloylation+and+increases+biomass+digestibility&rft.jtitle=The+New+phytologist&rft.au=de+Souza%2C+Wagner+R.&rft.au=Martins%2C+Polyana+K.&rft.au=Freeman%2C+Jackie&rft.au=Pellny%2C+Till+K.&rft.date=2018-04-01&rft.issn=0028-646X&rft.eissn=1469-8137&rft.volume=218&rft.issue=1&rft.spage=81&rft.epage=93&rft_id=info:doi/10.1111%2Fnph.14970&rft.externalDBID=n%2Fa&rft.externalDocID=10_1111_nph_14970
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0028-646X&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0028-646X&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0028-646X&client=summon