Bifidobacterium mellis sp. nov., isolated from the honey stomach of the honey bee Apis mellifera

A novel Bifidobacterium strain, Bin7N T , was isolated from the honey stomach of the honey bee Apis mellifera . Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic and fructose 6-phosphate phosphoketolase-positive. Their optimal growth is at 37 °C in anaerobiosis in MRS (De M...

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Published inInternational Journal of Systematic and Evolutionary Microbiology Vol. 73; no. 3
Main Authors Olofsson, Tobias C., Modesto, Monica, Pascarelli, Stefano, Scarafile, Donatella, Mattarelli, Paola, Vasquez, Alejandra
Format Journal Article
LanguageEnglish
Published England Microbiology Society 01.01.2023
Subjects
Animals
Apis mellifera
Bacterial Typing Techniques
Base Composition
Bees
Bifidobacterium
Bifidobacterium mellis sp. nov
Bifidobacterium; Apis mellifera; Bifidobacterium mellis sp. nov; honey stomach; new species
Biologi
Biological Sciences
DNA, Bacterial - genetics
Fatty Acids - chemistry
honey stomach
Microbiology
Mikrobiologi
Natural Sciences
Naturvetenskap
new species
Phylogeny
RNA, Ribosomal, 16S - genetics
Sequence Analysis, DNA
Stomach
Apis mellifera
new species
Bifidobacterium mellis sp. nov
honey stomach
Bifidobacterium
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Abstract A novel Bifidobacterium strain, Bin7N T , was isolated from the honey stomach of the honey bee Apis mellifera . Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic and fructose 6-phosphate phosphoketolase-positive. Their optimal growth is at 37 °C in anaerobiosis in MRS (De Man, Rogosa and Sharpe) added with cysteine. The honey bee microbiota was composed of several phylotypes of Bifidobacterium and Lactobacillus . Comparative analysis of 16S rRNA gene sequence similarity revealed that strain Bin7N T grouped with Bifidobacterium species originating from honey bees and was closely related to Bifidobacterium asteroides DSM 20089 T (99.67 % similarity). However, the highest average nucleotide identity and digital DNA–DNA hybridization values of 94.88 and 60.6 %, respectively, were obtained with Bifidobacterium choladohabitans JCM 34586 T . The DNA G+C content of the type strain is 60.8 mol%. The cell-wall peptidoglycan is of the A4β l -Orn– d -Asp type. The main cellular fatty acids of strain Bin7N T are C 18 : 1  ω9 c , C 16 : 0 , C 18 : 1  ω7 c and C 18 : 0 . Phenotypic characterization and genotyping based on the genome sequences clearly show that this strain is distinct from the type strains of the so far recognized Bifidobacterium species. Thus, Bifidobacterium mellis sp. nov. (Bin7N T =DSM 29108 T =CCUG 66113 T ) is proposed as novel Bifidobacterium species.
AbstractList A novel Bifidobacterium strain, Bin7N T , was isolated from the honey stomach of the honey bee Apis mellifera . Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic and fructose 6-phosphate phosphoketolase-positive. Their optimal growth is at 37 °C in anaerobiosis in MRS (De Man, Rogosa and Sharpe) added with cysteine. The honey bee microbiota was composed of several phylotypes of Bifidobacterium and Lactobacillus . Comparative analysis of 16S rRNA gene sequence similarity revealed that strain Bin7N T grouped with Bifidobacterium species originating from honey bees and was closely related to Bifidobacterium asteroides DSM 20089 T (99.67 % similarity). However, the highest average nucleotide identity and digital DNA–DNA hybridization values of 94.88 and 60.6 %, respectively, were obtained with Bifidobacterium choladohabitans JCM 34586 T . The DNA G+C content of the type strain is 60.8 mol%. The cell-wall peptidoglycan is of the A4β l -Orn– d -Asp type. The main cellular fatty acids of strain Bin7N T are C 18 : 1  ω9 c , C 16 : 0 , C 18 : 1  ω7 c and C 18 : 0 . Phenotypic characterization and genotyping based on the genome sequences clearly show that this strain is distinct from the type strains of the so far recognized Bifidobacterium species. Thus, Bifidobacterium mellis sp. nov. (Bin7N T =DSM 29108 T =CCUG 66113 T ) is proposed as novel Bifidobacterium species.
A novel Bifidobacterium strain, Bin7NT, was isolated from the honey stomach of the honey bee Apis mellifera. Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic and fructose 6-phosphate phosphoketolase-positive. Their optimal growth is at 37 °C in anaerobiosis in MRS (De Man, Rogosa and Sharpe) added with cysteine. The honey bee microbiota was composed of several phylotypes of Bifidobacterium and Lactobacillus. Comparative analysis of 16S rRNA gene sequence similarity revealed that strain Bin7NT grouped with Bifidobacterium species originating from honey bees and was closely related to Bifidobacterium asteroides DSM 20089T (99.67 % similarity). However, the highest average nucleotide identity and digital DNA– DNA hybridization values of 94.88 and 60.6 %, respectively, were obtained with Bifidobacterium choladohabitans JCM 34586T. The DNA G+C content of the type strain is 60.8 mol%. The cell-wall peptidoglycan is of the A4β l-Orn–d-Asp type. The main cellular fatty acids of strain Bin7NT are C18: 1 ω9c, C16: 0, C18: 1 ω7c and C18: 0. Phenotypic characterization and genotyping based on the genome sequences clearly show that this strain is distinct from the type strains of the so far recognized Bifidobacterium species. Thus, Bifidobacterium mellis sp. nov. (Bin7NT=DSM 29108T=CCUG 66113T) is proposed as novel Bifidobacterium species.
A novel strain, Bin7N , was isolated from the honey stomach of the honey bee . Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic and fructose 6-phosphate phosphoketolase-positive. Their optimal growth is at 37 °C in anaerobiosis in MRS (De Man, Rogosa and Sharpe) added with cysteine. The honey bee microbiota was composed of several phylotypes of and . Comparative analysis of 16S rRNA gene sequence similarity revealed that strain Bin7N grouped with species originating from honey bees and was closely related to DSM 20089 (99.67 % similarity). However, the highest average nucleotide identity and digital DNA-DNA hybridization values of 94.88 and 60.6 %, respectively, were obtained with JCM 34586 . The DNA G+C content of the type strain is 60.8 mol%. The cell-wall peptidoglycan is of the A4β l-Orn-d-Asp type. The main cellular fatty acids of strain Bin7N are C  ω9 , C , C  ω7 and C . Phenotypic characterization and genotyping based on the genome sequences clearly show that this strain is distinct from the type strains of the so far recognized species. Thus, sp. nov. (Bin7N =DSM 29108 =CCUG 66113 ) is proposed as novel species.
A novel Bifidobacterium strain, Bin7NT, was isolated from the honey stomach of the honey bee Apis mellifera. Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic and fructose 6-phosphate phosphoketolase-positive. Their optimal growth is at 37 °C in anaerobiosis in MRS (De Man, Rogosa and Sharpe) added with cysteine. The honey bee microbiota was composed of several phylotypes of Bifidobacterium and Lactobacillus. Comparative analysis of 16S rRNA gene sequence similarity revealed that strain Bin7NT grouped with Bifidobacterium species originating from honey bees and was closely related to Bifidobacterium asteroides DSM 20089T (99.67 % similarity). However, the highest average nucleotide identity and digital DNA-DNA hybridization values of 94.88 and 60.6 %, respectively, were obtained with Bifidobacterium choladohabitans JCM 34586T. The DNA G+C content of the type strain is 60.8 mol%. The cell-wall peptidoglycan is of the A4β l-Orn-d-Asp type. The main cellular fatty acids of strain Bin7NT are C18 : 1 ω9c, C16 : 0, C18 : 1 ω7c and C18 : 0. Phenotypic characterization and genotyping based on the genome sequences clearly show that this strain is distinct from the type strains of the so far recognized Bifidobacterium species. Thus, Bifidobacterium mellis sp. nov. (Bin7NT=DSM 29108T=CCUG 66113T) is proposed as novel Bifidobacterium species.A novel Bifidobacterium strain, Bin7NT, was isolated from the honey stomach of the honey bee Apis mellifera. Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic and fructose 6-phosphate phosphoketolase-positive. Their optimal growth is at 37 °C in anaerobiosis in MRS (De Man, Rogosa and Sharpe) added with cysteine. The honey bee microbiota was composed of several phylotypes of Bifidobacterium and Lactobacillus. Comparative analysis of 16S rRNA gene sequence similarity revealed that strain Bin7NT grouped with Bifidobacterium species originating from honey bees and was closely related to Bifidobacterium asteroides DSM 20089T (99.67 % similarity). However, the highest average nucleotide identity and digital DNA-DNA hybridization values of 94.88 and 60.6 %, respectively, were obtained with Bifidobacterium choladohabitans JCM 34586T. The DNA G+C content of the type strain is 60.8 mol%. The cell-wall peptidoglycan is of the A4β l-Orn-d-Asp type. The main cellular fatty acids of strain Bin7NT are C18 : 1 ω9c, C16 : 0, C18 : 1 ω7c and C18 : 0. Phenotypic characterization and genotyping based on the genome sequences clearly show that this strain is distinct from the type strains of the so far recognized Bifidobacterium species. Thus, Bifidobacterium mellis sp. nov. (Bin7NT=DSM 29108T=CCUG 66113T) is proposed as novel Bifidobacterium species.
Author Stefano Pascarelli
Monica Modesto
Paola Mattarelli
Alejandra Vasquez
Donatella Scarafile
Tobias C. Olofsson
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new species
Bifidobacterium mellis sp. nov
honey stomach
Bifidobacterium
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Snippet A novel Bifidobacterium strain, Bin7N T , was isolated from the honey stomach of the honey bee Apis mellifera . Cells are Gram-positive, non-motile,...
A novel strain, Bin7N , was isolated from the honey stomach of the honey bee . Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic and...
A novel Bifidobacterium strain, Bin7NT, was isolated from the honey stomach of the honey bee Apis mellifera. Cells are Gram-positive, non-motile,...
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SubjectTerms Animals
Apis mellifera
Bacterial Typing Techniques
Base Composition
Bees
Bifidobacterium
Bifidobacterium mellis sp. nov
Bifidobacterium; Apis mellifera; Bifidobacterium mellis sp. nov; honey stomach; new species
Biologi
Biological Sciences
DNA, Bacterial - genetics
Fatty Acids - chemistry
honey stomach
Microbiology
Mikrobiologi
Natural Sciences
Naturvetenskap
new species
Phylogeny
RNA, Ribosomal, 16S - genetics
Sequence Analysis, DNA
Stomach
Title Bifidobacterium mellis sp. nov., isolated from the honey stomach of the honey bee Apis mellifera
URI https://cir.nii.ac.jp/crid/1873116917723323776
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