Transcriptomics analysis for the identification of potential age-related genes and cells associated with three major urogenital cancers
Age is one of the most important risk factors of the occurrence for tumor patients. The majority of patients with urogenital cancers are the elderly, whose clinical characteristics are greatly affected by age and ageing. Our study aimed to explore age-related genes, cells, and biological changes in...
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Published in | Scientific reports Vol. 11; no. 1; pp. 641 - 13 |
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Main Authors | , , , , , , , , |
Format | Journal Article |
Language | English |
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London
Nature Publishing Group UK
12.01.2021
Nature Publishing Group Nature Portfolio |
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Abstract | Age is one of the most important risk factors of the occurrence for tumor patients. The majority of patients with urogenital cancers are the elderly, whose clinical characteristics are greatly affected by age and ageing. Our study aimed to explore age-related genes, cells, and biological changes in three common urogenital cancers via integrative bioinformatics analysis. First, mRNA (count format) and clinical data for bladder cancer, prostate cancer and renal cell carcinoma were downloaded from the Cancer Genome Atlas (TCGA). Through the comparison of clinicopathological characteristics, genes expression and cells infiltration between the old group and the young group, it was found that the clinical characteristics, genes and cells in the tumor microenvironment of different ages were quite different. And 4 key cells, 14 hub genes and some potential pathways were identified and considered as important factors. More importantly, we analyzed the differential landscape of the genes and cells from different perspectives, and confirmed its importance. In conclusion, we identified genes and cell types associated with age-related changes in the tumour microenvironment in urogenital cancer patients. These genes and cell types may play a critical role in the age-associated differences in clinicopathological characteristics among urogenital cancers, thus providing a link between ageing and cancer occurrence. The findings of this study may pave the way for the development of age-tailored approaches to treat cancer and other age-related diseases. |
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AbstractList | Age is one of the most important risk factors of the occurrence for tumor patients. The majority of patients with urogenital cancers are the elderly, whose clinical characteristics are greatly affected by age and ageing. Our study aimed to explore age-related genes, cells, and biological changes in three common urogenital cancers via integrative bioinformatics analysis. First, mRNA (count format) and clinical data for bladder cancer, prostate cancer and renal cell carcinoma were downloaded from the Cancer Genome Atlas (TCGA). Through the comparison of clinicopathological characteristics, genes expression and cells infiltration between the old group and the young group, it was found that the clinical characteristics, genes and cells in the tumor microenvironment of different ages were quite different. And 4 key cells, 14 hub genes and some potential pathways were identified and considered as important factors. More importantly, we analyzed the differential landscape of the genes and cells from different perspectives, and confirmed its importance. In conclusion, we identified genes and cell types associated with age-related changes in the tumour microenvironment in urogenital cancer patients. These genes and cell types may play a critical role in the age-associated differences in clinicopathological characteristics among urogenital cancers, thus providing a link between ageing and cancer occurrence. The findings of this study may pave the way for the development of age-tailored approaches to treat cancer and other age-related diseases.Age is one of the most important risk factors of the occurrence for tumor patients. The majority of patients with urogenital cancers are the elderly, whose clinical characteristics are greatly affected by age and ageing. Our study aimed to explore age-related genes, cells, and biological changes in three common urogenital cancers via integrative bioinformatics analysis. First, mRNA (count format) and clinical data for bladder cancer, prostate cancer and renal cell carcinoma were downloaded from the Cancer Genome Atlas (TCGA). Through the comparison of clinicopathological characteristics, genes expression and cells infiltration between the old group and the young group, it was found that the clinical characteristics, genes and cells in the tumor microenvironment of different ages were quite different. And 4 key cells, 14 hub genes and some potential pathways were identified and considered as important factors. More importantly, we analyzed the differential landscape of the genes and cells from different perspectives, and confirmed its importance. In conclusion, we identified genes and cell types associated with age-related changes in the tumour microenvironment in urogenital cancer patients. These genes and cell types may play a critical role in the age-associated differences in clinicopathological characteristics among urogenital cancers, thus providing a link between ageing and cancer occurrence. The findings of this study may pave the way for the development of age-tailored approaches to treat cancer and other age-related diseases. Age is one of the most important risk factors of the occurrence for tumor patients. The majority of patients with urogenital cancers are the elderly, whose clinical characteristics are greatly affected by age and ageing. Our study aimed to explore age-related genes, cells, and biological changes in three common urogenital cancers via integrative bioinformatics analysis. First, mRNA (count format) and clinical data for bladder cancer, prostate cancer and renal cell carcinoma were downloaded from the Cancer Genome Atlas (TCGA). Through the comparison of clinicopathological characteristics, genes expression and cells infiltration between the old group and the young group, it was found that the clinical characteristics, genes and cells in the tumor microenvironment of different ages were quite different. And 4 key cells, 14 hub genes and some potential pathways were identified and considered as important factors. More importantly, we analyzed the differential landscape of the genes and cells from different perspectives, and confirmed its importance. In conclusion, we identified genes and cell types associated with age-related changes in the tumour microenvironment in urogenital cancer patients. These genes and cell types may play a critical role in the age-associated differences in clinicopathological characteristics among urogenital cancers, thus providing a link between ageing and cancer occurrence. The findings of this study may pave the way for the development of age-tailored approaches to treat cancer and other age-related diseases. Abstract Age is one of the most important risk factors of the occurrence for tumor patients. The majority of patients with urogenital cancers are the elderly, whose clinical characteristics are greatly affected by age and ageing. Our study aimed to explore age-related genes, cells, and biological changes in three common urogenital cancers via integrative bioinformatics analysis. First, mRNA (count format) and clinical data for bladder cancer, prostate cancer and renal cell carcinoma were downloaded from the Cancer Genome Atlas (TCGA). Through the comparison of clinicopathological characteristics, genes expression and cells infiltration between the old group and the young group, it was found that the clinical characteristics, genes and cells in the tumor microenvironment of different ages were quite different. And 4 key cells, 14 hub genes and some potential pathways were identified and considered as important factors. More importantly, we analyzed the differential landscape of the genes and cells from different perspectives, and confirmed its importance. In conclusion, we identified genes and cell types associated with age-related changes in the tumour microenvironment in urogenital cancer patients. These genes and cell types may play a critical role in the age-associated differences in clinicopathological characteristics among urogenital cancers, thus providing a link between ageing and cancer occurrence. The findings of this study may pave the way for the development of age-tailored approaches to treat cancer and other age-related diseases. |
ArticleNumber | 641 |
Author | Yang, Xin Tian, Junqiang Han, Dali Ying, Lijun Cao, Jinlong Wang, Lijie Li, Jianpeng Li, Pan Yao, Zhiqiang |
Author_xml | – sequence: 1 givenname: Jinlong surname: Cao fullname: Cao, Jinlong organization: Department of Urology, The Second Hospital of Lanzhou University, Key Laboratory of Urological Diseases of Gansu Provincial – sequence: 2 givenname: Jianpeng surname: Li fullname: Li, Jianpeng organization: Department of Urology, The Second Hospital of Lanzhou University, Key Laboratory of Urological Diseases of Gansu Provincial – sequence: 3 givenname: Xin surname: Yang fullname: Yang, Xin organization: Reproductive Medicine Center, The Second Hospital of Lanzhou University – sequence: 4 givenname: Pan surname: Li fullname: Li, Pan organization: Department of Urology, The Second Hospital of Lanzhou University, Key Laboratory of Urological Diseases of Gansu Provincial – sequence: 5 givenname: Zhiqiang surname: Yao fullname: Yao, Zhiqiang organization: Department of Urology, The Second Hospital of Lanzhou University, Key Laboratory of Urological Diseases of Gansu Provincial – sequence: 6 givenname: Dali surname: Han fullname: Han, Dali organization: Department of Urology, The Second Hospital of Lanzhou University, Key Laboratory of Urological Diseases of Gansu Provincial – sequence: 7 givenname: Lijun surname: Ying fullname: Ying, Lijun organization: Department of Urology, The Second Hospital of Lanzhou University, Key Laboratory of Urological Diseases of Gansu Provincial – sequence: 8 givenname: Lijie surname: Wang fullname: Wang, Lijie organization: Department of Gynecology, The Second Hospital of Lanzhou University – sequence: 9 givenname: Junqiang surname: Tian fullname: Tian, Junqiang email: ery_tianjq@lzu.edu.cn organization: Department of Urology, The Second Hospital of Lanzhou University, Key Laboratory of Urological Diseases of Gansu Provincial |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/33436826$$D View this record in MEDLINE/PubMed |
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Snippet | Age is one of the most important risk factors of the occurrence for tumor patients. The majority of patients with urogenital cancers are the elderly, whose... Abstract Age is one of the most important risk factors of the occurrence for tumor patients. The majority of patients with urogenital cancers are the elderly,... |
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SubjectTerms | 631/114 631/67 692/4025 692/4028 692/53 Age Age Factors Aged Aging Bioinformatics Biomarkers, Tumor - genetics Bladder cancer Cancer Computational Biology Female Gene Expression Regulation, Neoplastic Genital cancers Genomes Geriatrics Humanities and Social Sciences Humans Kidney cancer Kidney Neoplasms - genetics Kidney Neoplasms - pathology Male Metastases Middle Aged multidisciplinary Prognosis Prostate cancer Prostatic Neoplasms - genetics Prostatic Neoplasms - pathology Protein Interaction Maps Renal cell carcinoma Risk factors Science Science (multidisciplinary) Survival Rate Transcriptome Tumor Microenvironment Tumors Urinary Bladder Neoplasms - genetics Urinary Bladder Neoplasms - pathology |
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Title | Transcriptomics analysis for the identification of potential age-related genes and cells associated with three major urogenital cancers |
URI | https://link.springer.com/article/10.1038/s41598-020-80065-y https://www.ncbi.nlm.nih.gov/pubmed/33436826 https://www.proquest.com/docview/2477093592 https://www.proquest.com/docview/2477520602 https://pubmed.ncbi.nlm.nih.gov/PMC7803945 https://doaj.org/article/5c10249372ee431bb7e701d5550d6642 |
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