Racial Diversity of Actionable Mutations in Non–Small Cell Lung Cancer
Lung cancer is the leading cause of cancer-related deaths in the US. The reasons for higher incidence and poorer survival rates among black compared with white lung cancer patients have not been defined. We hypothesized that differential incidence of somatic cancer gene mutations may be a contributi...
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Published in | Journal of thoracic oncology Vol. 10; no. 2; pp. 250 - 255 |
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Main Authors | , , , , , , |
Format | Journal Article |
Language | English |
Published |
United States
Elsevier Inc
01.02.2015
Copyright by the European Lung Cancer Conference and the International Association for the Study of Lung Cancer |
Subjects | |
Online Access | Get full text |
ISSN | 1556-0864 1556-1380 1556-1380 |
DOI | 10.1097/JTO.0000000000000420 |
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Abstract | Lung cancer is the leading cause of cancer-related deaths in the US. The reasons for higher incidence and poorer survival rates among black compared with white lung cancer patients have not been defined. We hypothesized that differential incidence of somatic cancer gene mutations may be a contributing factor. Previous genomic studies of non–small cell lung cancer (NSCLC) have not adequately represented black patients.
A matrix-assisted laser desorption/ionization and time-of-flight mass spectrometry approach was used to analyze tumor DNA for 214 coding mutations in 26 cancer genes previously identified in NSCLC. The samples included NSCLC from 335 white patients and 137 black patients. For 299 of these, normal matched DNA was available and analyzed.
Epidermal growth factor receptor (EGFR) exon 19 deletions were only detected in women cases, with increased odds for black women compared with white women (odds ratio = 3.914, 95% confidence interval: 1.014–15.099, p = 0.048). Beyond race, variations in mutation frequencies were seen by histology. DDR2 alterations, previously described as somatic mutations, were identified as constitutional variants.
This study is among the largest comparing somatic mutations in black and white patients. The results point to the molecular diversity of NSCLC and raise new questions as to the importance of inherited alleles. Genomic tumor testing will benefit both populations, although the mutation spectrum appears to vary by sex, race, and histology. |
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AbstractList | INTRODUCTION:Lung cancer is the leading cause of cancer-related deaths in the US. The reasons for higher incidence and poorer survival rates among black compared with white lung cancer patients have not been defined. We hypothesized that differential incidence of somatic cancer gene mutations may be a contributing factor. Previous genomic studies of non–small cell lung cancer (NSCLC) have not adequately represented black patients.
METHODS:A matrix-assisted laser desorption/ionization and time-of-flight mass spectrometry approach was used to analyze tumor DNA for 214 coding mutations in 26 cancer genes previously identified in NSCLC. The samples included NSCLC from 335 white patients and 137 black patients. For 299 of these, normal matched DNA was available and analyzed.
RESULTS:Epidermal growth factor receptor (EGFR) exon 19 deletions were only detected in women cases, with increased odds for black women compared with white women (odds ratio = 3.914, 95% confidence interval1.014–15.099, p = 0.048). Beyond race, variations in mutation frequencies were seen by histology. DDR2 alterations, previously described as somatic mutations, were identified as constitutional variants.
CONCLUSIONS:This study is among the largest comparing somatic mutations in black and white patients. The results point to the molecular diversity of NSCLC and raise new questions as to the importance of inherited alleles. Genomic tumor testing will benefit both populations, although the mutation spectrum appears to vary by sex, race, and histology. Lung cancer is the leading cause of cancer-related deaths in the US. The reasons for higher incidence and poorer survival rates among black compared with white lung cancer patients have not been defined. We hypothesized that differential incidence of somatic cancer gene mutations may be a contributing factor. Previous genomic studies of non–small cell lung cancer (NSCLC) have not adequately represented black patients. A matrix-assisted laser desorption/ionization and time-of-flight mass spectrometry approach was used to analyze tumor DNA for 214 coding mutations in 26 cancer genes previously identified in NSCLC. The samples included NSCLC from 335 white patients and 137 black patients. For 299 of these, normal matched DNA was available and analyzed. Epidermal growth factor receptor (EGFR) exon 19 deletions were only detected in women cases, with increased odds for black women compared with white women (odds ratio = 3.914, 95% confidence interval: 1.014–15.099, p = 0.048). Beyond race, variations in mutation frequencies were seen by histology. DDR2 alterations, previously described as somatic mutations, were identified as constitutional variants. This study is among the largest comparing somatic mutations in black and white patients. The results point to the molecular diversity of NSCLC and raise new questions as to the importance of inherited alleles. Genomic tumor testing will benefit both populations, although the mutation spectrum appears to vary by sex, race, and histology. Lung cancer is the leading cause of cancer-related deaths in the US. The reasons for higher incidence and poorer survival rates among black compared with white lung cancer patients have not been defined. We hypothesized that differential incidence of somatic cancer gene mutations may be a contributing factor. Previous genomic studies of non-small cell lung cancer (NSCLC) have not adequately represented black patients.INTRODUCTIONLung cancer is the leading cause of cancer-related deaths in the US. The reasons for higher incidence and poorer survival rates among black compared with white lung cancer patients have not been defined. We hypothesized that differential incidence of somatic cancer gene mutations may be a contributing factor. Previous genomic studies of non-small cell lung cancer (NSCLC) have not adequately represented black patients.A matrix-assisted laser desorption/ionization and time-of-flight mass spectrometry approach was used to analyze tumor DNA for 214 coding mutations in 26 cancer genes previously identified in NSCLC. The samples included NSCLC from 335 white patients and 137 black patients. For 299 of these, normal matched DNA was available and analyzed.METHODSA matrix-assisted laser desorption/ionization and time-of-flight mass spectrometry approach was used to analyze tumor DNA for 214 coding mutations in 26 cancer genes previously identified in NSCLC. The samples included NSCLC from 335 white patients and 137 black patients. For 299 of these, normal matched DNA was available and analyzed.Epidermal growth factor receptor (EGFR) exon 19 deletions were only detected in women cases, with increased odds for black women compared with white women (odds ratio = 3.914, 95% confidence interval: 1.014-15.099, p = 0.048). Beyond race, variations in mutation frequencies were seen by histology. DDR2 alterations, previously described as somatic mutations, were identified as constitutional variants.RESULTSEpidermal growth factor receptor (EGFR) exon 19 deletions were only detected in women cases, with increased odds for black women compared with white women (odds ratio = 3.914, 95% confidence interval: 1.014-15.099, p = 0.048). Beyond race, variations in mutation frequencies were seen by histology. DDR2 alterations, previously described as somatic mutations, were identified as constitutional variants.This study is among the largest comparing somatic mutations in black and white patients. The results point to the molecular diversity of NSCLC and raise new questions as to the importance of inherited alleles. Genomic tumor testing will benefit both populations, although the mutation spectrum appears to vary by sex, race, and histology.CONCLUSIONSThis study is among the largest comparing somatic mutations in black and white patients. The results point to the molecular diversity of NSCLC and raise new questions as to the importance of inherited alleles. Genomic tumor testing will benefit both populations, although the mutation spectrum appears to vary by sex, race, and histology. |
Author | Chen, Wei Cote, Michele L. Bollig-Fischer, Aliccia Schwartz, Ann G. Gadgeel, Shirish M. Wenzlaff, Angela S. Bepler, Gerold |
AuthorAffiliation | Barbara Ann Karmanos Cancer Institute and Department of Oncology, Wayne State University, Detroit, MI |
AuthorAffiliation_xml | – name: Barbara Ann Karmanos Cancer Institute and Department of Oncology, Wayne State University, Detroit, MI |
Author_xml | – sequence: 1 givenname: Aliccia surname: Bollig-Fischer fullname: Bollig-Fischer, Aliccia email: bollig@karmanos.org – sequence: 2 givenname: Wei surname: Chen fullname: Chen, Wei – sequence: 3 givenname: Shirish M. surname: Gadgeel fullname: Gadgeel, Shirish M. – sequence: 4 givenname: Angela S. surname: Wenzlaff fullname: Wenzlaff, Angela S. – sequence: 5 givenname: Michele L. surname: Cote fullname: Cote, Michele L. – sequence: 6 givenname: Ann G. surname: Schwartz fullname: Schwartz, Ann G. – sequence: 7 givenname: Gerold surname: Bepler fullname: Bepler, Gerold |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/25376516$$D View this record in MEDLINE/PubMed |
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Keywords | Non–small cell lung cancer mutations Tumor suppressors Oncogenes African American |
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Snippet | Lung cancer is the leading cause of cancer-related deaths in the US. The reasons for higher incidence and poorer survival rates among black compared with white... INTRODUCTION:Lung cancer is the leading cause of cancer-related deaths in the US. The reasons for higher incidence and poorer survival rates among black... |
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SubjectTerms | Adult African American African Americans - genetics Aged Aged, 80 and over Carcinoma, Non-Small-Cell Lung - ethnology Carcinoma, Non-Small-Cell Lung - genetics Carcinoma, Non-Small-Cell Lung - pathology DNA Mutational Analysis - methods DNA, Neoplasm - analysis DNA, Neoplasm - genetics European Continental Ancestry Group - genetics Female Humans Lung Neoplasms - ethnology Lung Neoplasms - genetics Lung Neoplasms - pathology Middle Aged Mutation mutations Non–small cell lung cancer Oncogenes Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization - methods Tumor suppressors |
Title | Racial Diversity of Actionable Mutations in Non–Small Cell Lung Cancer |
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