A new proposed taxon for double-stranded DNA viruses, the order “Ligamenvirales”
Linear viruses with double-stranded DNA genomes are classified into two families, Lipothrixviridae and Rudiviridae . The members of these two families, all of which infect hyperhermophilic members of the domain Archaea, differ significantly in the complexity of their virions as well as in their mech...
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Published in | Archives of virology Vol. 157; no. 4; pp. 791 - 795 |
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Main Authors | , |
Format | Journal Article |
Language | English |
Published |
Vienna
Springer Vienna
01.04.2012
Springer Springer Nature B.V Springer Verlag |
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Abstract | Linear viruses with double-stranded DNA genomes are classified into two families,
Lipothrixviridae
and
Rudiviridae
. The members of these two families, all of which infect hyperhermophilic members of the domain Archaea, differ significantly in the complexity of their virions as well as in their mechanisms of genome replication. However, recent structural and genomic studies have revealed a robust evolutionary link between members of the two families. To acknowledge this relationship we propose to unify the two families into the new taxonomic order “Ligamenvirales”. |
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AbstractList | Linear viruses with double-stranded DNA genomes are classified into two families,
Lipothrixviridae
and
Rudiviridae
. The members of these two families, all of which infect hyperhermophilic members of the domain Archaea, differ significantly in the complexity of their virions as well as in their mechanisms of genome replication. However, recent structural and genomic studies have revealed a robust evolutionary link between members of the two families. To acknowledge this relationship we propose to unify the two families into the new taxonomic order “Ligamenvirales”. Linear viruses with double-stranded DNA genomes are classified into two families, Lipothrixviridae and Rudiviridae. The members of these two families, all of which infect hyperhermophilic members of the domain Archaea, differ significantly in the complexity of their virions as well as in their mechanisms of genome replication. However, recent structural and genomic studies have revealed a robust evolutionary link between members of the two families. To acknowledge this relationship we propose to unify the two families into the new taxonomic order "Ligamenvirales".[PUBLICATION ABSTRACT] Linear viruses with double-stranded DNA genomes are classified into two families, Lipothrixviridae and Rudiviridae. The members of these two families, all of which infect hyperhermophilic members of the domain Archaea, differ significantly in the complexity of their virions as well as in their mechanisms of genome replication. However, recent structural and genomic studies have revealed a robust evolutionary link between members of the two families. To acknowledge this relationship we propose to unify the two families into the new taxonomic order "Ligamenvirales". |
Author | Krupovic, Mart Prangishvili, David |
Author_xml | – sequence: 1 givenname: David surname: Prangishvili fullname: Prangishvili, David email: david.prangishvili@pasteur.fr organization: Department of Microbiology, Institut Pasteur – sequence: 2 givenname: Mart surname: Krupovic fullname: Krupovic, Mart organization: Department of Microbiology, Institut Pasteur |
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Cites_doi | 10.1006/jmbi.2001.4761 10.1016/j.virol.2005.02.025 10.1006/viro.2000.0776 10.1128/JB.187.11.3855-3858.2005 10.1007/BF00327644 10.1128/JVI.01467-10 10.1016/j.virusres.2006.01.007 10.1371/journal.pone.0023668 10.1128/JVI.01410-07 10.1016/S0042-6822(03)00481-1 10.1093/bioinformatics/btn507 10.1038/nrmicro1527 10.1016/j.str.2009.03.001 10.1016/j.resmic.2008.04.009 10.1073/pnas.0909893106 10.1016/j.coviro.2011.06.001 10.1128/MMBR.00011-11 10.1128/JB.00795-08 10.1093/nar/25.17.3389 10.1006/viro.2001.1190 10.1093/molbev/msr121 10.1093/nar/gkn322 10.1111/j.1574-6976.2011.00280.x 10.1093/genetics/152.4.1387 |
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Keywords | Archaeal Virus Hyperthermophilic Archaeal Genome Replication Hyperthermophilic Archaea Linear dsDNA |
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References | Krupovic, Bamford (CR11) 2011; 1 Vestergaard, Haring, Peng, Rachel, Garrett, Prangishvili (CR23) 2005; 336 Vestergaard, Shah, Bize, Reitberger, Reuter, Phan, Briegel, Rachel, Garrett, Prangishvili (CR24) 2008; 190 Tamura, Peterson, Peterson, Stecher, Nei, Kumar (CR21) 2011; 28 Vestergaard, Aramayo, Basta (CR22) 2008; 82 Birkenbihl, Neef, Prangishvili, Kemper (CR3) 2001; 309 Pei, Tang, Grishin (CR14) 2008; 36 Holm, Kääriäinen, Rosenström, Schenkel (CR9) 2008; 24 Krupovic, Prangishvili, Hendrix, Bamford (CR12) 2011; 75 Haring, Vestergaard, Brügger, Rachel, Garrett, Prangishvili (CR8) 2005; 187 Bize, Peng, Prokofeva, McLellan, Lucas, Forterre, Garrett, Bonch-Osmolovskaya, Prangishvili (CR4) 2008; 159 Prangishvili, Garrett, Koonin (CR18) 2006; 117 Gardner, Guan, Jack (CR6) 2011; 6 Goulet, Blangy, Redder, Prangishvili, Felisberto-Rodrigues, Forterre, Campanacci, Cambillau (CR7) 2009; 106 Altschul, Madden, Schaffer, Zhang, Zhang, Miller, Lipman (CR1) 1997; 25 Oke, Kerou, Liu, Peng, Garrett, Prangishvili, Naismith, White (CR13) 2011; 85 Blum, Zillig, Mallok, Domdey, Prangishvili (CR5) 2001; 281 Janekovic, Wunder, Holz, Zillig, Gierl, Neumann (CR10) 1983; 192 Prangishvili, Arnold, Gotz, Ziese, Holz, Kristjansson, Zillig (CR19) 1999; 152 Szymczyna, Taurog, Young, Snyder, Johnson, Williamson (CR20) 2009; 17 Prangishvili, Forterre, Garrett (CR17) 2006; 4 Peng, Blum, She, Mallok, Brügger, Garrett, Zillig, Prangishvili (CR15) 2001; 291 Pina, Bize, Forterre, Prangishvili (CR16) 2011; 35 Bettstetter, Peng, Garrett, Prangishvili (CR2) 2003; 315 A Goulet (1229_CR7) 2009; 106 SF Altschul (1229_CR1) 1997; 25 M Haring (1229_CR8) 2005; 187 RP Birkenbihl (1229_CR3) 2001; 309 BR Szymczyna (1229_CR20) 2009; 17 S Janekovic (1229_CR10) 1983; 192 L Holm (1229_CR9) 2008; 24 M Krupovic (1229_CR11) 2011; 1 D Prangishvili (1229_CR17) 2006; 4 J Pei (1229_CR14) 2008; 36 M Bettstetter (1229_CR2) 2003; 315 M Oke (1229_CR13) 2011; 85 G Vestergaard (1229_CR22) 2008; 82 G Vestergaard (1229_CR23) 2005; 336 H Blum (1229_CR5) 2001; 281 G Vestergaard (1229_CR24) 2008; 190 A Bize (1229_CR4) 2008; 159 X Peng (1229_CR15) 2001; 291 M Krupovic (1229_CR12) 2011; 75 D Prangishvili (1229_CR18) 2006; 117 D Prangishvili (1229_CR19) 1999; 152 K Tamura (1229_CR21) 2011; 28 AF Gardner (1229_CR6) 2011; 6 M Pina (1229_CR16) 2011; 35 |
References_xml | – volume: 309 start-page: 1067 year: 2001 end-page: 1076 ident: CR3 article-title: Holliday junction resolving enzymes of archaeal viruses SIRV1 and SIRV2 publication-title: J Mol Biol doi: 10.1006/jmbi.2001.4761 contributor: fullname: Kemper – volume: 336 start-page: 83 year: 2005 end-page: 92 ident: CR23 article-title: A novel rudivirus, ARV1, of the hyperthermophilic archaeal genus publication-title: Virology doi: 10.1016/j.virol.2005.02.025 contributor: fullname: Prangishvili – volume: 281 start-page: 6 year: 2001 end-page: 9 ident: CR5 article-title: The genome of the archaeal virus SIRV1 has features in common with genomes of eukaryal viruses publication-title: Virology doi: 10.1006/viro.2000.0776 contributor: fullname: Prangishvili – volume: 187 start-page: 3855 year: 2005 end-page: 3858 ident: CR8 article-title: Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures publication-title: J Bacteriol doi: 10.1128/JB.187.11.3855-3858.2005 contributor: fullname: Prangishvili – volume: 192 start-page: 39 year: 1983 end-page: 45 ident: CR10 article-title: TTV1, TTV2 and TTV3, a family of viruses of the extremely thermophilic, anaerobic, sulfur reducing archaebacterium publication-title: Mol Gen Genet doi: 10.1007/BF00327644 contributor: fullname: Neumann – volume: 85 start-page: 925 year: 2011 end-page: 931 ident: CR13 article-title: A dimeric Rep protein initiates replication of a linear archaeal virus genome: implications for the Rep mechanism and viral replication publication-title: J Virol doi: 10.1128/JVI.01467-10 contributor: fullname: White – volume: 117 start-page: 52 year: 2006 end-page: 67 ident: CR18 article-title: Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life publication-title: Virus Res doi: 10.1016/j.virusres.2006.01.007 contributor: fullname: Koonin – volume: 6 start-page: e23668 year: 2011 ident: CR6 article-title: Biochemical characterization of a structure-specific resolving enzyme from rod-shaped virus 2 publication-title: PloS one doi: 10.1371/journal.pone.0023668 contributor: fullname: Jack – volume: 82 start-page: 371 year: 2008 end-page: 381 ident: CR22 article-title: Structure of the filamentous virus 3 and comparative genomics of related archaeal lipothrixviruses publication-title: J Virol doi: 10.1128/JVI.01410-07 contributor: fullname: Basta – volume: 315 start-page: 68 year: 2003 end-page: 79 ident: CR2 article-title: AFV1, a novel virus infecting hyperthermophilic archaea of the genus publication-title: Virology doi: 10.1016/S0042-6822(03)00481-1 contributor: fullname: Prangishvili – volume: 24 start-page: 2780 year: 2008 end-page: 2781 ident: CR9 article-title: Searching protein structure databases with DaliLite v. 3 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btn507 contributor: fullname: Schenkel – volume: 4 start-page: 837 year: 2006 end-page: 848 ident: CR17 article-title: Viruses of the Archaea: a unifying view publication-title: Nat Rev Microbiol doi: 10.1038/nrmicro1527 contributor: fullname: Garrett – volume: 17 start-page: 499 year: 2009 end-page: 507 ident: CR20 article-title: Synergy of NMR, computation, and X-ray crystallography for structural biology publication-title: Structure doi: 10.1016/j.str.2009.03.001 contributor: fullname: Williamson – volume: 159 start-page: 358 year: 2008 end-page: 366 ident: CR4 article-title: Viruses in acidic geothermal environments of the Kamchatka Peninsula publication-title: Res Microbiol doi: 10.1016/j.resmic.2008.04.009 contributor: fullname: Prangishvili – volume: 106 start-page: 21155 year: 2009 end-page: 21160 ident: CR7 article-title: filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.0909893106 contributor: fullname: Cambillau – volume: 1 start-page: 118 issue: 2 year: 2011 end-page: 124 ident: CR11 article-title: Double-stranded DNA viruses: 20 families and only five different architectural principles for virion assembly publication-title: Curr Opin Virol doi: 10.1016/j.coviro.2011.06.001 contributor: fullname: Bamford – volume: 75 start-page: 610 year: 2011 end-page: 635 ident: CR12 article-title: Genomics of bacterial and archaeal viruses: dynamics within the prokaryotic virosphere publication-title: Microbiol Mol Biol Rev doi: 10.1128/MMBR.00011-11 contributor: fullname: Bamford – volume: 190 start-page: 6837 year: 2008 end-page: 6845 ident: CR24 article-title: rod-shaped virus and the interplay of crenarchaeal rudiviruses with the CRISPR antiviral system publication-title: J Bacteriol doi: 10.1128/JB.00795-08 contributor: fullname: Prangishvili – volume: 152 start-page: 1387 year: 1999 end-page: 1396 ident: CR19 article-title: A novel virus family, the Rudiviridae: Structure, virus-host interactions and genome variability of the sulfolobus viruses SIRV1 and SIRV2 publication-title: Genetics contributor: fullname: Zillig – volume: 25 start-page: 3389 year: 1997 end-page: 3402 ident: CR1 article-title: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs publication-title: Nucleic Acids Res doi: 10.1093/nar/25.17.3389 contributor: fullname: Lipman – volume: 291 start-page: 226 year: 2001 end-page: 234 ident: CR15 article-title: Sequences and replication of genomes of the archaeal rudiviruses SIRV1 and SIRV2: relationships to the archaeal lipothrixvirus SIFV and some eukaryal viruses publication-title: Virology doi: 10.1006/viro.2001.1190 contributor: fullname: Prangishvili – volume: 28 start-page: 2731 year: 2011 end-page: 2739 ident: CR21 article-title: MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods publication-title: Mol Biol Evol doi: 10.1093/molbev/msr121 contributor: fullname: Kumar – volume: 36 start-page: W30 year: 2008 end-page: W34 ident: CR14 article-title: PROMALS3D web server for accurate multiple protein sequence and structure alignments publication-title: Nucleic Acids Res doi: 10.1093/nar/gkn322 contributor: fullname: Grishin – volume: 35 start-page: 1035 year: 2011 end-page: 1054 ident: CR16 article-title: Archeoviruses publication-title: FEMS Microbiol Rev doi: 10.1111/j.1574-6976.2011.00280.x contributor: fullname: Prangishvili – volume: 75 start-page: 610 year: 2011 ident: 1229_CR12 publication-title: Microbiol Mol Biol Rev doi: 10.1128/MMBR.00011-11 contributor: fullname: M Krupovic – volume: 85 start-page: 925 year: 2011 ident: 1229_CR13 publication-title: J Virol doi: 10.1128/JVI.01467-10 contributor: fullname: M Oke – volume: 192 start-page: 39 year: 1983 ident: 1229_CR10 publication-title: Mol Gen Genet doi: 10.1007/BF00327644 contributor: fullname: S Janekovic – volume: 1 start-page: 118 issue: 2 year: 2011 ident: 1229_CR11 publication-title: Curr Opin Virol doi: 10.1016/j.coviro.2011.06.001 contributor: fullname: M Krupovic – volume: 152 start-page: 1387 year: 1999 ident: 1229_CR19 publication-title: Genetics doi: 10.1093/genetics/152.4.1387 contributor: fullname: D Prangishvili – volume: 35 start-page: 1035 year: 2011 ident: 1229_CR16 publication-title: FEMS Microbiol Rev doi: 10.1111/j.1574-6976.2011.00280.x contributor: fullname: M Pina – volume: 24 start-page: 2780 year: 2008 ident: 1229_CR9 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btn507 contributor: fullname: L Holm – volume: 6 start-page: e23668 year: 2011 ident: 1229_CR6 publication-title: PloS one doi: 10.1371/journal.pone.0023668 contributor: fullname: AF Gardner – volume: 82 start-page: 371 year: 2008 ident: 1229_CR22 publication-title: J Virol doi: 10.1128/JVI.01410-07 contributor: fullname: G Vestergaard – volume: 36 start-page: W30 year: 2008 ident: 1229_CR14 publication-title: Nucleic Acids Res doi: 10.1093/nar/gkn322 contributor: fullname: J Pei – volume: 336 start-page: 83 year: 2005 ident: 1229_CR23 publication-title: Virology doi: 10.1016/j.virol.2005.02.025 contributor: fullname: G Vestergaard – volume: 281 start-page: 6 year: 2001 ident: 1229_CR5 publication-title: Virology doi: 10.1006/viro.2000.0776 contributor: fullname: H Blum – volume: 106 start-page: 21155 year: 2009 ident: 1229_CR7 publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.0909893106 contributor: fullname: A Goulet – volume: 4 start-page: 837 year: 2006 ident: 1229_CR17 publication-title: Nat Rev Microbiol doi: 10.1038/nrmicro1527 contributor: fullname: D Prangishvili – volume: 17 start-page: 499 year: 2009 ident: 1229_CR20 publication-title: Structure doi: 10.1016/j.str.2009.03.001 contributor: fullname: BR Szymczyna – volume: 187 start-page: 3855 year: 2005 ident: 1229_CR8 publication-title: J Bacteriol doi: 10.1128/JB.187.11.3855-3858.2005 contributor: fullname: M Haring – volume: 117 start-page: 52 year: 2006 ident: 1229_CR18 publication-title: Virus Res doi: 10.1016/j.virusres.2006.01.007 contributor: fullname: D Prangishvili – volume: 28 start-page: 2731 year: 2011 ident: 1229_CR21 publication-title: Mol Biol Evol doi: 10.1093/molbev/msr121 contributor: fullname: K Tamura – volume: 291 start-page: 226 year: 2001 ident: 1229_CR15 publication-title: Virology doi: 10.1006/viro.2001.1190 contributor: fullname: X Peng – volume: 315 start-page: 68 year: 2003 ident: 1229_CR2 publication-title: Virology doi: 10.1016/S0042-6822(03)00481-1 contributor: fullname: M Bettstetter – volume: 309 start-page: 1067 year: 2001 ident: 1229_CR3 publication-title: J Mol Biol doi: 10.1006/jmbi.2001.4761 contributor: fullname: RP Birkenbihl – volume: 190 start-page: 6837 year: 2008 ident: 1229_CR24 publication-title: J Bacteriol doi: 10.1128/JB.00795-08 contributor: fullname: G Vestergaard – volume: 25 start-page: 3389 year: 1997 ident: 1229_CR1 publication-title: Nucleic Acids Res doi: 10.1093/nar/25.17.3389 contributor: fullname: SF Altschul – volume: 159 start-page: 358 year: 2008 ident: 1229_CR4 publication-title: Res Microbiol doi: 10.1016/j.resmic.2008.04.009 contributor: fullname: A Bize |
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Snippet | Linear viruses with double-stranded DNA genomes are classified into two families,
Lipothrixviridae
and
Rudiviridae
. The members of these two families, all of... Linear viruses with double-stranded DNA genomes are classified into two families, Lipothrixviridae and Rudiviridae. The members of these two families, all of... |
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SubjectTerms | Amino Acid Sequence Archaea Archaea - virology Biological and medical sciences Biomedical and Life Sciences Biomedicine Capsid Proteins Capsid Proteins - chemistry Capsid Proteins - genetics Cluster Analysis DNA DNA - genetics DNA, Viral DNA, Viral - genetics Fundamental and applied biological sciences. Psychology Gene Order Genes Genome, Viral Genomes Infectious Diseases Life Sciences Lipothrixviridae Lipothrixviridae - classification Lipothrixviridae - genetics Lipothrixviridae - growth & development Medical Microbiology Microbiology Microbiology and Parasitology Microscopy, Electron, Transmission Miscellaneous Models, Molecular Molecular Sequence Data Phylogeny Protein Structure, Tertiary Proteins Rudiviridae Rudiviridae - classification Rudiviridae - genetics Rudiviridae - growth & development Sequence Homology, Amino Acid Virion Virion - ultrastructure Virology Virology Division News Virus Replication Viruses |
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Title | A new proposed taxon for double-stranded DNA viruses, the order “Ligamenvirales” |
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