Engineering lithoheterotrophy in an obligate chemolithoautotrophic Fe(II) oxidizing bacterium
Neutrophilic Fe(II) oxidizing bacteria like Mariprofundus ferrooxydans are obligate chemolithoautotrophic bacteria that play an important role in the biogeochemical cycling of iron and other elements in multiple environments. These bacteria generally exhibit a singular metabolic mode of growth which...
Saved in:
Published in | Scientific reports Vol. 11; no. 1; pp. 2165 - 6 |
---|---|
Main Authors | , |
Format | Journal Article |
Language | English |
Published |
London
Nature Publishing Group UK
25.01.2021
Nature Publishing Group Nature Portfolio |
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | Neutrophilic Fe(II) oxidizing bacteria like
Mariprofundus ferrooxydans
are obligate chemolithoautotrophic bacteria that play an important role in the biogeochemical cycling of iron and other elements in multiple environments. These bacteria generally exhibit a singular metabolic mode of growth which prohibits comparative “omics” studies. Furthermore, these bacteria are considered non-amenable to classical genetic methods due to low cell densities, the inability to form colonies on solid medium, and production of copious amounts of insoluble iron oxyhydroxides as their metabolic byproduct. Consequently, the molecular and biochemical understanding of these bacteria remains speculative despite the availability of substantial genomic information. Here we develop the first genetic system in neutrophilic Fe(II) oxidizing bacterium and use it to engineer lithoheterotrophy in
M. ferrooxydans
, a metabolism that has been speculated but not experimentally validated. This synthetic biology approach could be extended to gain physiological understanding and domesticate other bacteria that grow using a single metabolic mode. |
---|---|
AbstractList | Neutrophilic Fe(II) oxidizing bacteria like Mariprofundus ferrooxydans are obligate chemolithoautotrophic bacteria that play an important role in the biogeochemical cycling of iron and other elements in multiple environments. These bacteria generally exhibit a singular metabolic mode of growth which prohibits comparative "omics" studies. Furthermore, these bacteria are considered non-amenable to classical genetic methods due to low cell densities, the inability to form colonies on solid medium, and production of copious amounts of insoluble iron oxyhydroxides as their metabolic byproduct. Consequently, the molecular and biochemical understanding of these bacteria remains speculative despite the availability of substantial genomic information. Here we develop the first genetic system in neutrophilic Fe(II) oxidizing bacterium and use it to engineer lithoheterotrophy in M. ferrooxydans, a metabolism that has been speculated but not experimentally validated. This synthetic biology approach could be extended to gain physiological understanding and domesticate other bacteria that grow using a single metabolic mode. Neutrophilic Fe(II) oxidizing bacteria like Mariprofundus ferrooxydans are obligate chemolithoautotrophic bacteria that play an important role in the biogeochemical cycling of iron and other elements in multiple environments. These bacteria generally exhibit a singular metabolic mode of growth which prohibits comparative "omics" studies. Furthermore, these bacteria are considered non-amenable to classical genetic methods due to low cell densities, the inability to form colonies on solid medium, and production of copious amounts of insoluble iron oxyhydroxides as their metabolic byproduct. Consequently, the molecular and biochemical understanding of these bacteria remains speculative despite the availability of substantial genomic information. Here we develop the first genetic system in neutrophilic Fe(II) oxidizing bacterium and use it to engineer lithoheterotrophy in M. ferrooxydans, a metabolism that has been speculated but not experimentally validated. This synthetic biology approach could be extended to gain physiological understanding and domesticate other bacteria that grow using a single metabolic mode.Neutrophilic Fe(II) oxidizing bacteria like Mariprofundus ferrooxydans are obligate chemolithoautotrophic bacteria that play an important role in the biogeochemical cycling of iron and other elements in multiple environments. These bacteria generally exhibit a singular metabolic mode of growth which prohibits comparative "omics" studies. Furthermore, these bacteria are considered non-amenable to classical genetic methods due to low cell densities, the inability to form colonies on solid medium, and production of copious amounts of insoluble iron oxyhydroxides as their metabolic byproduct. Consequently, the molecular and biochemical understanding of these bacteria remains speculative despite the availability of substantial genomic information. Here we develop the first genetic system in neutrophilic Fe(II) oxidizing bacterium and use it to engineer lithoheterotrophy in M. ferrooxydans, a metabolism that has been speculated but not experimentally validated. This synthetic biology approach could be extended to gain physiological understanding and domesticate other bacteria that grow using a single metabolic mode. Neutrophilic Fe(II) oxidizing bacteria like Mariprofundus ferrooxydans are obligate chemolithoautotrophic bacteria that play an important role in the biogeochemical cycling of iron and other elements in multiple environments. These bacteria generally exhibit a singular metabolic mode of growth which prohibits comparative “omics” studies. Furthermore, these bacteria are considered non-amenable to classical genetic methods due to low cell densities, the inability to form colonies on solid medium, and production of copious amounts of insoluble iron oxyhydroxides as their metabolic byproduct. Consequently, the molecular and biochemical understanding of these bacteria remains speculative despite the availability of substantial genomic information. Here we develop the first genetic system in neutrophilic Fe(II) oxidizing bacterium and use it to engineer lithoheterotrophy in M. ferrooxydans , a metabolism that has been speculated but not experimentally validated. This synthetic biology approach could be extended to gain physiological understanding and domesticate other bacteria that grow using a single metabolic mode. Abstract Neutrophilic Fe(II) oxidizing bacteria like Mariprofundus ferrooxydans are obligate chemolithoautotrophic bacteria that play an important role in the biogeochemical cycling of iron and other elements in multiple environments. These bacteria generally exhibit a singular metabolic mode of growth which prohibits comparative “omics” studies. Furthermore, these bacteria are considered non-amenable to classical genetic methods due to low cell densities, the inability to form colonies on solid medium, and production of copious amounts of insoluble iron oxyhydroxides as their metabolic byproduct. Consequently, the molecular and biochemical understanding of these bacteria remains speculative despite the availability of substantial genomic information. Here we develop the first genetic system in neutrophilic Fe(II) oxidizing bacterium and use it to engineer lithoheterotrophy in M. ferrooxydans, a metabolism that has been speculated but not experimentally validated. This synthetic biology approach could be extended to gain physiological understanding and domesticate other bacteria that grow using a single metabolic mode. |
ArticleNumber | 2165 |
Author | Gralnick, Jeffrey A. Jain, Abhiney |
Author_xml | – sequence: 1 givenname: Abhiney surname: Jain fullname: Jain, Abhiney organization: BioTechnology Institute and Department of Plant and Microbial Biology, University of Minnesota — Twin Cities – sequence: 2 givenname: Jeffrey A. orcidid: 0000-0001-9250-7770 surname: Gralnick fullname: Gralnick, Jeffrey A. email: gralnick@umn.edu organization: BioTechnology Institute and Department of Plant and Microbial Biology, University of Minnesota — Twin Cities |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/33495498$$D View this record in MEDLINE/PubMed |
BookMark | eNp9ks1u1DAUhS1URNuhL8ACRWJTFgH_Js4GCVVtGakSG1giy3FuEo8Se3AcRHl6nEkLbRf15lr2OZ-O7HOKjpx3gNAbgj8QzOTHiRNRyRxTkkvCCc3ZC3RCMRc5ZZQePdgfo7Np2uG0BK04qV6hY8Z4JXglT9CPS9dZBxCs67LBxt73ECH4GPy-v82sy7TLfD3YTkfITA-jP6j0HFeNNdkVnG-37zP_2zb2z8KptUkMO4-v0ctWDxOc3c0N-n51-e3iS37z9Xp78fkmN6IsY24I1JUoMW9FBTWjTDNdQGNEXTJc0KYuCeMmTQqaFawBbjiTTQlADCm5ZBu0XbmN1zu1D3bU4VZ5bdXhwIdO6RCtGUAxQYu6MBIAKs44q3ErmalZK40hXEBifVpZ-7keUwhwMejhEfTxjbO96vwvVcrEpkUCnN8Bgv85wxTVaCcDw6Ad-HlSlEtCMJdFlaTvnkh3fg4uPdWiwoIXBIukevsw0b8o97-YBHIVmOCnKUCrjI06Wr8EtIMiWC2dUWtnVOqMOnQmETaIPrHe0581sdU07ZfeQPgf-xnXXzYM1N8 |
CitedBy_id | crossref_primary_10_1128_mbio_02150_22 crossref_primary_10_3389_fgeed_2024_1376927 crossref_primary_10_1099_mic_0_001240 crossref_primary_10_1016_j_tibtech_2021_10_004 |
Cites_doi | 10.1371/journal.pone.0000667 10.1038/nmeth895 10.1038/ismej.2016.87 10.1146/annurev.micro.112408.134208 10.1128/AEM.01967-15 10.1111/j.1462-2920.2011.02652.x 10.1016/j.femsre.2003.12.001 10.1128/AEM.63.12.4784-4792.1997 10.1080/01490450701670152 10.1073/pnas.1834303100 10.1371/journal.pone.0025386 10.1146/annurev.mi.39.100185.001541 10.1002/bit.10702 10.1021/ac60289a016 10.3389/fmicb.2013.00254 10.3389/fmicb.2015.01265 10.1128/AEM.02239-17 10.1128/AEM.68.8.3988-3995.2002 10.1093/femsle/fnx148 10.1042/BST20120154 |
ContentType | Journal Article |
Copyright | The Author(s) 2021 The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. |
Copyright_xml | – notice: The Author(s) 2021 – notice: The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. |
DBID | C6C AAYXX CITATION NPM 3V. 7X7 7XB 88A 88E 88I 8FE 8FH 8FI 8FJ 8FK ABUWG AEUYN AFKRA AZQEC BBNVY BENPR BHPHI CCPQU DWQXO FYUFA GHDGH GNUQQ HCIFZ K9. LK8 M0S M1P M2P M7P PHGZM PHGZT PIMPY PJZUB PKEHL PPXIY PQEST PQGLB PQQKQ PQUKI PRINS Q9U 7X8 5PM DOA |
DOI | 10.1038/s41598-021-81412-3 |
DatabaseName | Springer Nature OA Free Journals CrossRef PubMed ProQuest Central (Corporate) Health & Medical Collection ProQuest Central (purchase pre-March 2016) Biology Database (Alumni Edition) Medical Database (Alumni Edition) Science Database (Alumni Edition) ProQuest SciTech Collection ProQuest Natural Science Collection ProQuest Hospital Collection Hospital Premium Collection (Alumni Edition) ProQuest Central (Alumni) (purchase pre-March 2016) ProQuest Central (Alumni) ProQuest One Sustainability ProQuest Central UK/Ireland ProQuest Central Essentials Biological Science Collection ProQuest Central Natural Science Collection ProQuest One Community College ProQuest Central Health Research Premium Collection Health Research Premium Collection (Alumni) ProQuest Central Student SciTech Premium Collection ProQuest Health & Medical Complete (Alumni) Biological Sciences ProQuest Health & Medical Collection PML(ProQuest Medical Library) Science Database Biological science database ProQuest Central Premium ProQuest One Academic Publicly Available Content Database ProQuest Health & Medical Research Collection ProQuest One Academic Middle East (New) ProQuest One Health & Nursing ProQuest One Academic Eastern Edition (DO NOT USE) ProQuest One Applied & Life Sciences ProQuest One Academic ProQuest One Academic UKI Edition ProQuest Central China ProQuest Central Basic MEDLINE - Academic PubMed Central (Full Participant titles) DOAJ Directory of Open Access Journals |
DatabaseTitle | CrossRef PubMed Publicly Available Content Database ProQuest Central Student ProQuest One Academic Middle East (New) ProQuest Central Essentials ProQuest Health & Medical Complete (Alumni) ProQuest Central (Alumni Edition) SciTech Premium Collection ProQuest One Community College ProQuest One Health & Nursing ProQuest Natural Science Collection ProQuest Central China ProQuest Biology Journals (Alumni Edition) ProQuest Central ProQuest One Applied & Life Sciences ProQuest One Sustainability ProQuest Health & Medical Research Collection Health Research Premium Collection Health and Medicine Complete (Alumni Edition) Natural Science Collection ProQuest Central Korea Health & Medical Research Collection Biological Science Collection ProQuest Central (New) ProQuest Medical Library (Alumni) ProQuest Science Journals (Alumni Edition) ProQuest Biological Science Collection ProQuest Central Basic ProQuest Science Journals ProQuest One Academic Eastern Edition ProQuest Hospital Collection Health Research Premium Collection (Alumni) Biological Science Database ProQuest SciTech Collection ProQuest Hospital Collection (Alumni) ProQuest Health & Medical Complete ProQuest Medical Library ProQuest One Academic UKI Edition ProQuest One Academic ProQuest One Academic (New) ProQuest Central (Alumni) MEDLINE - Academic |
DatabaseTitleList | PubMed MEDLINE - Academic CrossRef Publicly Available Content Database |
Database_xml | – sequence: 1 dbid: C6C name: Springer Nature OA Free Journals url: http://www.springeropen.com/ sourceTypes: Publisher – sequence: 2 dbid: DOA name: DOAJ Directory of Open Access Journals url: https://www.doaj.org/ sourceTypes: Open Website – sequence: 3 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 4 dbid: BENPR name: ProQuest Central url: https://www.proquest.com/central sourceTypes: Aggregation Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Biology |
EISSN | 2045-2322 |
EndPage | 6 |
ExternalDocumentID | oai_doaj_org_article_3526b6c8eee94343b0f83cb3f8cc145e PMC7835226 33495498 10_1038_s41598_021_81412_3 |
Genre | Journal Article |
GrantInformation_xml | – fundername: Office of Naval Research grantid: N00014-13-10552 funderid: http://dx.doi.org/10.13039/100000006 – fundername: National Science Foundation grantid: OCE-0939564; MCB-1815584 – fundername: Office of Naval Research grantid: N00014-13-10552 – fundername: National Science Foundation grantid: OCE-0939564 – fundername: National Science Foundation grantid: MCB-1815584 – fundername: ; grantid: OCE-0939564; MCB-1815584 – fundername: ; grantid: N00014-13-10552 |
GroupedDBID | 0R~ 3V. 4.4 53G 5VS 7X7 88A 88E 88I 8FE 8FH 8FI 8FJ AAFWJ AAJSJ AAKDD ABDBF ABUWG ACGFS ACSMW ACUHS ADBBV ADRAZ AENEX AEUYN AFKRA AJTQC ALIPV ALMA_UNASSIGNED_HOLDINGS AOIJS AZQEC BAWUL BBNVY BCNDV BENPR BHPHI BPHCQ BVXVI C6C CCPQU DIK DWQXO EBD EBLON EBS ESX FYUFA GNUQQ GROUPED_DOAJ GX1 HCIFZ HH5 HMCUK HYE KQ8 LK8 M0L M1P M2P M48 M7P M~E NAO OK1 PIMPY PQQKQ PROAC PSQYO RNT RNTTT RPM SNYQT UKHRP AASML AAYXX AFPKN CITATION PHGZM PHGZT NPM 7XB 8FK AARCD K9. PJZUB PKEHL PPXIY PQEST PQGLB PQUKI PRINS Q9U 7X8 5PM PUEGO |
ID | FETCH-LOGICAL-c577t-c1eb95704f59eb323a3a6edc5b73062db7134c2db2ea363de4c438d7ee1c17483 |
IEDL.DBID | M48 |
ISSN | 2045-2322 |
IngestDate | Wed Aug 27 01:20:36 EDT 2025 Thu Aug 21 18:31:57 EDT 2025 Fri Jul 11 06:20:08 EDT 2025 Wed Aug 13 10:59:51 EDT 2025 Thu Jan 02 22:58:49 EST 2025 Tue Jul 01 01:07:19 EDT 2025 Thu Apr 24 23:07:02 EDT 2025 Fri Feb 21 02:39:43 EST 2025 |
IsDoiOpenAccess | true |
IsOpenAccess | true |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 1 |
Language | English |
License | Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-c577t-c1eb95704f59eb323a3a6edc5b73062db7134c2db2ea363de4c438d7ee1c17483 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 14 content type line 23 |
ORCID | 0000-0001-9250-7770 |
OpenAccessLink | http://journals.scholarsportal.info/openUrl.xqy?doi=10.1038/s41598-021-81412-3 |
PMID | 33495498 |
PQID | 2480546105 |
PQPubID | 2041939 |
PageCount | 6 |
ParticipantIDs | doaj_primary_oai_doaj_org_article_3526b6c8eee94343b0f83cb3f8cc145e pubmedcentral_primary_oai_pubmedcentral_nih_gov_7835226 proquest_miscellaneous_2481104869 proquest_journals_2480546105 pubmed_primary_33495498 crossref_citationtrail_10_1038_s41598_021_81412_3 crossref_primary_10_1038_s41598_021_81412_3 springer_journals_10_1038_s41598_021_81412_3 |
ProviderPackageCode | CITATION AAYXX |
PublicationCentury | 2000 |
PublicationDate | 2021-01-25 |
PublicationDateYYYYMMDD | 2021-01-25 |
PublicationDate_xml | – month: 01 year: 2021 text: 2021-01-25 day: 25 |
PublicationDecade | 2020 |
PublicationPlace | London |
PublicationPlace_xml | – name: London – name: England |
PublicationTitle | Scientific reports |
PublicationTitleAbbrev | Sci Rep |
PublicationTitleAlternate | Sci Rep |
PublicationYear | 2021 |
Publisher | Nature Publishing Group UK Nature Publishing Group Nature Portfolio |
Publisher_xml | – name: Nature Publishing Group UK – name: Nature Publishing Group – name: Nature Portfolio |
References | Fleming (CR20) 2018; 84 Quasem (CR4) 2017; 364 Emerson, Moyer (CR7) 1997; 63 Neubauer, Emerson, Megonigal (CR9) 2002; 68 Staley, Konopka (CR1) 1985; 39 Emerson (CR11) 2012; 40 Singer (CR12) 2011; 6 Stookey (CR21) 1970; 42 Emerson, Rentz, Lilburn, Davis, Aldrich, Chan, Moyer (CR3) 2007; 2 Kato (CR13) 2015; 6 Nishihara, Igarashi, Kodama (CR5) 1991; 41 Saltikov, Newman (CR15) 2003; 100 Chan, Levar, Zacharoff, Badalamenti, Bond (CR16) 2015; 81 Hernández-Montalvo (CR18) 2003; 83 Zaslaver (CR17) 2006; 3 Wood, Aurikko, Kelly (CR19) 2004; 28 Krepski, Hanson, Chan (CR2) 2012; 14 Shah, Chang, Morris (CR6) 2017; 11 Weiss (CR8) 2007; 24 Kües, Stahl (CR22) 1989; 53 Emerson, Fleming, McBeth (CR10) 2010; 64 Emerson (CR14) 2013; 4 JT Staley (81412_CR1) 1985; 39 ST Krepski (81412_CR2) 2012; 14 D Emerson (81412_CR11) 2012; 40 D Emerson (81412_CR14) 2013; 4 LL Stookey (81412_CR21) 1970; 42 EJ Fleming (81412_CR20) 2018; 84 CH Chan (81412_CR16) 2015; 81 S Kato (81412_CR13) 2015; 6 AP Wood (81412_CR19) 2004; 28 D Emerson (81412_CR7) 1997; 63 A Zaslaver (81412_CR17) 2006; 3 D Emerson (81412_CR3) 2007; 2 V Shah (81412_CR6) 2017; 11 E Singer (81412_CR12) 2011; 6 U Kües (81412_CR22) 1989; 53 I Quasem (81412_CR4) 2017; 364 SC Neubauer (81412_CR9) 2002; 68 CW Saltikov (81412_CR15) 2003; 100 V Hernández-Montalvo (81412_CR18) 2003; 83 H Nishihara (81412_CR5) 1991; 41 JV Weiss (81412_CR8) 2007; 24 D Emerson (81412_CR10) 2010; 64 |
References_xml | – volume: 2 start-page: 667 issue: 8 year: 2007 ident: CR3 article-title: A novel lineage of proteobacteria involved in formation of marine Fe-oxidizing microbial mat communities publication-title: PLoS ONE doi: 10.1371/journal.pone.0000667 – volume: 3 start-page: 623 issue: 8 year: 2006 ident: CR17 article-title: A comprehensive library of fluorescent transcriptional reporters for publication-title: Nat. Methods. doi: 10.1038/nmeth895 – volume: 11 start-page: 263 issue: 1 year: 2017 ident: CR6 article-title: Cultivation of a chemoautotroph from the SUP05 clade of marine bacteria that produces nitrite and consumes ammonium publication-title: ISME J. doi: 10.1038/ismej.2016.87 – volume: 64 start-page: 561 year: 2010 end-page: 583 ident: CR10 article-title: Iron-oxidizing bacteria: an environmental and genomic perspective publication-title: Annu. Rev. Microbiol. doi: 10.1146/annurev.micro.112408.134208 – volume: 81 start-page: 7178 issue: 20 year: 2015 end-page: 7186 ident: CR16 article-title: Scarless genome editing and stable inducible expression vectors for publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.01967-15 – volume: 14 start-page: 1671 issue: 7 year: 2012 end-page: 1680 ident: CR2 article-title: Isolation and characterization of a novel biomineral stalk-forming iron-oxidizing bacterium from a circumneutral groundwater seep publication-title: Environ. Microbiol. doi: 10.1111/j.1462-2920.2011.02652.x – volume: 28 start-page: 335 issue: 3 year: 2004 end-page: 352 ident: CR19 article-title: A challenge for 21st century molecular biology and biochemistry: what are the causes of obligate autotrophy and methanotrophy? publication-title: FEMS Microbiol. Rev. doi: 10.1016/j.femsre.2003.12.001 – volume: 63 start-page: 4784 issue: 12 year: 1997 end-page: 4792 ident: CR7 article-title: Isolation and characterization of novel iron-oxidizing bacteria that grow at circumneutral pH publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.63.12.4784-4792.1997 – volume: 24 start-page: 559 issue: 7–8 year: 2007 end-page: 570 ident: CR8 article-title: Characterization of neutrophilic Fe (II)-oxidizing bacteria isolated from the rhizosphere of wetland plants and description of Ferritrophicum radicicola gen. nov. sp. nov., and Sideroxydans paludicola sp. nov. publication-title: Geomicrobiol. J. doi: 10.1080/01490450701670152 – volume: 100 start-page: 10983 issue: 19 year: 2003 end-page: 10988 ident: CR15 article-title: Genetic identification of a respiratory arsenate reductase publication-title: Proc. Natl. Acad. Sci. USA doi: 10.1073/pnas.1834303100 – volume: 6 start-page: 25386 issue: 9 year: 2011 ident: CR12 article-title: PV-1 the first genome of a marine Fe (II) oxidizing publication-title: PLoS ONE doi: 10.1371/journal.pone.0025386 – volume: 53 start-page: 491 issue: 4 year: 1989 end-page: 516 ident: CR22 article-title: Replication of plasmids in gram-negative bacteria publication-title: Microbiol. Mol. Biol. Rev. – volume: 41 start-page: 130 issue: 1 year: 1991 end-page: 133 ident: CR5 article-title: Hydrogenovibrio marinus gen. nov., sp. nov., a marine obligately chemolithoautotrophic hydrogen-oxidizing bacterium publication-title: Int. J. Syst. Evol. Microbiol. – volume: 39 start-page: 321 issue: 1 year: 1985 end-page: 346 ident: CR1 article-title: Measurement of in situ activities of non-photosynthetic microorganisms in aquatic and terrestrial habitats publication-title: Ann. Rev. Microbiol. doi: 10.1146/annurev.mi.39.100185.001541 – volume: 83 start-page: 687 issue: 6 year: 2003 end-page: 694 ident: CR18 article-title: Expression of and in a PTS mutant restores glucose transport and increases glycolytic flux to fermentation products publication-title: Biotechnol. Bioeng. doi: 10.1002/bit.10702 – volume: 42 start-page: 779 year: 1970 end-page: 781 ident: CR21 article-title: Ferrozine—a new spectrophotometric reagent for iron publication-title: Anal. Chem. doi: 10.1021/ac60289a016 – volume: 4 start-page: 254 year: 2013 ident: CR14 article-title: Comparative genomics of freshwater Fe-oxidizing bacteria: implications for physiology, ecology, and systematics publication-title: Front. Microbiol. doi: 10.3389/fmicb.2013.00254 – volume: 6 start-page: 1265 year: 2015 ident: CR13 article-title: Comparative genomic insights into ecophysiology of neutrophilic, microaerophilic iron oxidizing bacteria publication-title: Front. Microbiol. doi: 10.3389/fmicb.2015.01265 – volume: 84 start-page: e02239 issue: 9 year: 2018 end-page: e2317 ident: CR20 article-title: Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.02239-17 – volume: 68 start-page: 3988 issue: 8 year: 2002 end-page: 3995 ident: CR9 article-title: Life at the energetic edge: kinetics of circumneutral iron oxidation by lithotrophic iron-oxidizing bacteria isolated from the wetland-plant rhizosphere publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.68.8.3988-3995.2002 – volume: 364 start-page: 1148 issue: 14 year: 2017 ident: CR4 article-title: Peculiar citric acid cycle of hydrothermal vent chemolithoautotroph , and insights into carbon metabolism by obligate autotrophs publication-title: FEMS Microbiol. Let. doi: 10.1093/femsle/fnx148 – volume: 40 start-page: 1211 issue: 6 year: 2012 end-page: 1216 ident: CR11 article-title: Biogeochemistry and microbiology of microaerobic Fe (II) oxidation publication-title: Biochem. Soc. Trans. doi: 10.1042/BST20120154 – volume: 39 start-page: 321 issue: 1 year: 1985 ident: 81412_CR1 publication-title: Ann. Rev. Microbiol. doi: 10.1146/annurev.mi.39.100185.001541 – volume: 14 start-page: 1671 issue: 7 year: 2012 ident: 81412_CR2 publication-title: Environ. Microbiol. doi: 10.1111/j.1462-2920.2011.02652.x – volume: 24 start-page: 559 issue: 7–8 year: 2007 ident: 81412_CR8 publication-title: Geomicrobiol. J. doi: 10.1080/01490450701670152 – volume: 6 start-page: 1265 year: 2015 ident: 81412_CR13 publication-title: Front. Microbiol. doi: 10.3389/fmicb.2015.01265 – volume: 40 start-page: 1211 issue: 6 year: 2012 ident: 81412_CR11 publication-title: Biochem. Soc. Trans. doi: 10.1042/BST20120154 – volume: 28 start-page: 335 issue: 3 year: 2004 ident: 81412_CR19 publication-title: FEMS Microbiol. Rev. doi: 10.1016/j.femsre.2003.12.001 – volume: 42 start-page: 779 year: 1970 ident: 81412_CR21 publication-title: Anal. Chem. doi: 10.1021/ac60289a016 – volume: 41 start-page: 130 issue: 1 year: 1991 ident: 81412_CR5 publication-title: Int. J. Syst. Evol. Microbiol. – volume: 3 start-page: 623 issue: 8 year: 2006 ident: 81412_CR17 publication-title: Nat. Methods. doi: 10.1038/nmeth895 – volume: 84 start-page: e02239 issue: 9 year: 2018 ident: 81412_CR20 publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.02239-17 – volume: 68 start-page: 3988 issue: 8 year: 2002 ident: 81412_CR9 publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.68.8.3988-3995.2002 – volume: 6 start-page: 25386 issue: 9 year: 2011 ident: 81412_CR12 publication-title: PLoS ONE doi: 10.1371/journal.pone.0025386 – volume: 64 start-page: 561 year: 2010 ident: 81412_CR10 publication-title: Annu. Rev. Microbiol. doi: 10.1146/annurev.micro.112408.134208 – volume: 83 start-page: 687 issue: 6 year: 2003 ident: 81412_CR18 publication-title: Biotechnol. Bioeng. doi: 10.1002/bit.10702 – volume: 53 start-page: 491 issue: 4 year: 1989 ident: 81412_CR22 publication-title: Microbiol. Mol. Biol. Rev. – volume: 2 start-page: 667 issue: 8 year: 2007 ident: 81412_CR3 publication-title: PLoS ONE doi: 10.1371/journal.pone.0000667 – volume: 4 start-page: 254 year: 2013 ident: 81412_CR14 publication-title: Front. Microbiol. doi: 10.3389/fmicb.2013.00254 – volume: 100 start-page: 10983 issue: 19 year: 2003 ident: 81412_CR15 publication-title: Proc. Natl. Acad. Sci. USA doi: 10.1073/pnas.1834303100 – volume: 11 start-page: 263 issue: 1 year: 2017 ident: 81412_CR6 publication-title: ISME J. doi: 10.1038/ismej.2016.87 – volume: 63 start-page: 4784 issue: 12 year: 1997 ident: 81412_CR7 publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.63.12.4784-4792.1997 – volume: 364 start-page: 1148 issue: 14 year: 2017 ident: 81412_CR4 publication-title: FEMS Microbiol. Let. doi: 10.1093/femsle/fnx148 – volume: 81 start-page: 7178 issue: 20 year: 2015 ident: 81412_CR16 publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.01967-15 |
SSID | ssj0000529419 |
Score | 2.3380034 |
Snippet | Neutrophilic Fe(II) oxidizing bacteria like
Mariprofundus ferrooxydans
are obligate chemolithoautotrophic bacteria that play an important role in the... Neutrophilic Fe(II) oxidizing bacteria like Mariprofundus ferrooxydans are obligate chemolithoautotrophic bacteria that play an important role in the... Abstract Neutrophilic Fe(II) oxidizing bacteria like Mariprofundus ferrooxydans are obligate chemolithoautotrophic bacteria that play an important role in the... |
SourceID | doaj pubmedcentral proquest pubmed crossref springer |
SourceType | Open Website Open Access Repository Aggregation Database Index Database Enrichment Source Publisher |
StartPage | 2165 |
SubjectTerms | 631/326/171 631/326/325 631/326/47 631/553/552 631/61/318 Bacteria Biogeochemical cycles Humanities and Social Sciences Iron Leukocytes (neutrophilic) Metabolism multidisciplinary Science Science (multidisciplinary) |
SummonAdditionalLinks | – databaseName: DOAJ Directory of Open Access Journals dbid: DOA link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1Li9UwFA4yILgR31ZHieBC0TLNq0mWKl5mBF05MBsJSXrKLcy0MtMLM_56T5re670-N64KzWlJz6PnS07yhZDntQi-qRpRaqViKaGG0mruS2g0ZhRgmvk0of_xU314LD-cqJOto77SmrBMD5wVd5D420MdDQAkKjMRqtaIGERrYmRSQfr7Ys7bGkxlVm9uJbPzLplKmIMLzFRpNxlnadYrMfXtZKKJsP93KPPXxZI_VUynRLS4RW7OCJK-yT2_Ta5Bf4dcz2dKXt0lX7YYBili7OWwTCtehvF8QI3Srqe-p0M4TdQaQNFkZ8Mk5VdjlukiXcCLo6OXdLjsmu5bek_InM6rs3vkePH-87vDcj5DoYxK67GMDIJVupKtsjhu5sILX-PHqIChXfMmpL2kEa8cvKhFAzJKYRoNwCIOVoy4T_b6oYeHhGrQtrY--BYhiLGV9YLxqFtVRWs8ZwVha326OBOMp3MuTt1U6BbGZRs4tIGbbOBEQV5tnvma6TX-Kv02mWkjmaixpxvoMG52GPcvhynI_trIbo7XC8elQeyKUFIV5NmmGSMtlU98D8NqkkGsJE1tC_Ig-8SmJ0LIVC81BdE73rLT1d2WvltObN46Y-CCvF771Y9u_VkVj_6HKh6TGzwFRMVKrvbJ3ni-gieIscbwdAqn79UjIs0 priority: 102 providerName: Directory of Open Access Journals – databaseName: Health & Medical Collection dbid: 7X7 link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV3di9QwEA96Ivgifls9pYIPipZrvprkSVRc7gR98mBfJCTp9Hbhrjl3u6D-9Wbabs_1454KzbQkmZnMZCb5DSHPK-5dXda8UFKGQkAFhVHMFVCrZFGAKuowoP_pc3V4LD7O5XwMuK3HY5XbNbFfqOsYMEZ-wIRO3kUy9vLN-bcCq0ZhdnUsoXGVXEPoMpRqNVdTjAWzWIKa8a5MyfXBOtkrvFPGKMa-EK9vxx71sP3_8jX_PjL5R960N0ezW-Tm6EfmbwfG3yZXoL1Drg-VJX_cJV9_wxnMk6e9iAs89xK7VUzzmi_b3LV59KcIsAF5YtxZ7KncphtoliGfwYujo5d5_L6slz_xP35Adt6c3SPHsw9f3h8WYyWFIkiluiJQ8EaqUjTSpN0z4467Kg1G-qTgFas93igN6cnA8YrXIILgulYANKQti-b3yV4bW3hIcgXKVMZ51yRHRJvSOE5ZUI0sg9GO0YzQ7XzaMMKMY7WLU9unu7m2Aw9s4oHteWB5Rl5N35wPIBuXUr9DNk2UCJDdv4irEzvqm0XYf18FDQCIgMd92WgePG90CFRIyMj-lsl21Nq1vZCxjDybmpO-YRLFtRA3PU3ymISuTEYeDDIx9YRzgVlTnRG1Iy07Xd1taZeLHtNbDZ5wRl5v5eqiW_-fikeXj-IxucFQ1EtaMLlP9rrVBp4kH6rzT3tF-QV1fhnB priority: 102 providerName: ProQuest – databaseName: Springer Nature HAS Fully OA dbid: AAJSJ link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV3di9QwEB_OOwRfxG-rp1TwQdFi89Ukj6u43C3oix7ci5QknbqFu1b2uqD-9Sbph66egk-FdlLSzEzzS2bmF4CnBbOmyiuWSSFcxrHATEtqMqykn1GQSGLChv6798XRCV-ditM9oFMtTEzaj5SW8Tc9ZYe9uvATTSgGoyRsWgWivStwEKjavW0fLBarD6t5ZyXErjjRY4VMztQljXdmoUjWfxnC_DNR8rdoaZyEljfg-oge08XQ35uwh-0tuDqcJ_ntNnz6hV0w9fh63a1DtkvXbzo_mmnTpqZNO3sWaDUw9eo676KU2faDTOPSJT47Pn6edl-bqvke3mMHPuft-R04Wb79-OYoG89PyJyQss8cQauFzHkttF8zU2aYKfzHCOvduqCVDXWkzl8pGlawCrnjTFUSkTi_UFHsLuy3XYv3IZUodaGNNbWHH0rn2jBCnaxF7rQylCRApvEs3UguHs64OCtjkJupctBB6XVQRh2ULIEXc5svA7XGP6VfBzXNkoEWO97oNp_L0UzKQPZvC6cQMfDeMZvXijnLauUc4QITOJyUXI6-elFSrjxu9TBSJPBkfuy9LIROTIvdNsp4nMRVoRO4N9jE3BPGeIiVqgTkjrXsdHX3SdusI5O3HPBvAi8nu_rZrb8PxYP_E38I12gw_ZxkVBzCfr_Z4iOPpHr7eHSdH20kGOw priority: 102 providerName: Springer Nature |
Title | Engineering lithoheterotrophy in an obligate chemolithoautotrophic Fe(II) oxidizing bacterium |
URI | https://link.springer.com/article/10.1038/s41598-021-81412-3 https://www.ncbi.nlm.nih.gov/pubmed/33495498 https://www.proquest.com/docview/2480546105 https://www.proquest.com/docview/2481104869 https://pubmed.ncbi.nlm.nih.gov/PMC7835226 https://doaj.org/article/3526b6c8eee94343b0f83cb3f8cc145e |
Volume | 11 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV3db9MwED_tQ6C9IL4JjCpIPIAgI7bj2H5AqKtWbZU2IaBSX1BkOy6t1CVb10obfz3nfBQKhQeeLDnnxPHd6X7--h3Ay5QZncc5iwTnNkpc6iIlqI5cLjCiOCKI9gv6p2fp8TAZjPhoC9p0R80AXm2c2vl8UsP57OD68uYDOvz7-sq4fHeFQchfFKPEL2h5Er5t2MXIJHxGg9MG7tdc31QlRDV3ZzY33YPbjCV-80uuhaqK0X8TDP3zNOVvW6pVpOrfhTsNxAy7tU3cgy1X3IdbddLJmwfw9RcKwhBB-KSc-CMx5WJe4pCH0yLURViamefecCHq9LyspPRyUctMbdh3r05OXofl9TSffvfvMTXp8_L8IQz7R196x1GTZCGyXIhFZIkzios4GXOFE2vKNNMp_gw36PspzY2_bGqxpE6zlOUusQmTuXCOWJzNSPYIdoqycE8gFE6oVGmjx4hRpIqVZoRaMeaxVVJTEgBpxzOzDQO5T4Qxy6qdcCazWh0ZqiOr1JGxAN6s2lzU_Bv_lD70alpJeu7sqqKcf8saV8x8RgCTWumc8-R4zMRjyaxhY2ktSbgLYL9VctbaY0YTieAWsSYP4MXqMbqi31_RhSuXlQyCqUSmKoDHtU2setLaVABizVrWurr-pJhOKrpvUYPkAN62dvWzW38fiqf__aFnsEe9Q8QkonwfdhbzpXuOyGthOrAtRqIDu93u4PMAy8Ojs4-fsLaX9jrVakancrgfk3QwNQ |
linkProvider | Scholars Portal |
linkToHtml | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Zb9QwEB6VIgQvFTcpBYIEEgiiJnYcOw8Ica126fHUSvuCjO3Msiu1SdlDUH4UvxFPji3L0bc-rbSZjbyez57PHvsbgCcZt6aICx5JIVyUYoZRLpmJsJA-omAiE0Mb-nv7Wf8w_TgUwzX42d2FoWOV3ZxYT9RF5WiPfJulyrMLH-zF65OvEVWNouxqV0KjgcUOnn7zS7bZq8F779-njPU-HLzrR21VgcgJKeeRS9DmQsbpSOR-Jcm44SbDwgnrwZ6xwtLtSuc_GRqe8QJTl3JVSMTEefquuH_vJbjsA29Miz05lMs9HcqapUne3s2Judqe-fhId9hYQnttpA-4Ev_qMgH_4rZ_H9H8I09bh7_eddhoeWv4pgHaDVjD8iZcaSpZnt6CT7_pGoae2Y-rMZ2zqebTyvsxnJShKcPKHpGgB4YeKMdVbWUW88Zm4sIePhsMnofV90kx-UHvsY2S9OL4NhxeSB_fgfWyKvEehBJlnuXGmpEnPiqPc8MT5uRIxC5XhiUBJF1_atfKmlN1jSNdp9e50o0PtPeBrn2geQAvlr85aUQ9zrV-S25aWpIgd_1FNf2i2_GtqcyAzZxCRFLc4zYeKe4sHynnklRgAFudk3U7S8z0GaYDeLx87Mc3JW1MidWitvEMLVVZHsDdBhPLlnCeUpZWBSBX0LLS1NUn5WRca4jLhnkH8LLD1Vmz_t8Vm-f_i0dwtX-wt6t3B_s79-EaI9jHScTEFqzPpwt84Pnb3D6sB00Iny96lP4CfSVXEg |
linkToPdf | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwEB6VrUBcEG8CBYIEEgiije04dg4IUdpVl8KqQlTqBRnbcdiV2qTsQ1B-Gr8OTx5blkdvPUVKJpHj-cYz9tjfADxOmdF5nLNIcG6jxKUuygTVkcuF9yiOCKJxQf_9KN3ZT94e8IM1-NmdhcFtld2YWA_UeWVxjbxPE-mjC-_seb9ot0XsbQ1eHX-NsIIUZlq7choNRHbdyTc_fZu9HG55XT-hdLD98c1O1FYYiCwXYh5Z4kzGRZwUPPOzSso006nLLTce-CnNDZ60tP5KnWYpy11iEyZz4RyxPpSXzH_3AqwLnBX1YH1ze7T3YbnCgzm0hGTtSZ2Yyf7Me0s80UYJrrwhW-CKN6yLBvwr0v17w-YfWdvaGQ6uwpU2ig1fN7C7BmuuvA4Xm7qWJzfg028sh6GP88fVGHfdVPNp5bUaTspQl2FlDpHew4UeNkdVLaUX80ZmYsOBezocPgur75N88gO_Yxpe6cXRTdg_l16-Bb2yKt0dCIUTWZppowsfBskszjQj1IqCxzaTmpIASNefyrYk51hr41DVyXYmVaMD5XWgah0oFsDz5TvHDcXHmdKbqKalJNJz1zeq6RfVWrvCogMmtdI5h_x7zMSFZNawQlpLEu4C2OiUrNoxY6ZOER7Ao-Vjb-2YwtGlqxa1jI_XEplmAdxuMLFsCWMJ5mxlAGIFLStNXX1STsY1o7ho4vAAXnS4Om3W_7vi7tl_8RAueQtV74aj3XtwmSLqYxJRvgG9-XTh7vtgbm4etFYTwufzNtRfXxVcrQ |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Engineering+lithoheterotrophy+in+an+obligate+chemolithoautotrophic+Fe%28II%29+oxidizing+bacterium&rft.jtitle=Scientific+reports&rft.au=Jain%2C+Abhiney&rft.au=Gralnick%2C+Jeffrey+A.&rft.date=2021-01-25&rft.pub=Nature+Publishing+Group+UK&rft.eissn=2045-2322&rft.volume=11&rft_id=info:doi/10.1038%2Fs41598-021-81412-3&rft_id=info%3Apmid%2F33495498&rft.externalDocID=PMC7835226 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2045-2322&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2045-2322&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2045-2322&client=summon |