Variable Lymphocyte Receptor Recognition of the Immunodominant Glycoprotein of Bacillus anthracis Spores

Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed...

Full description

Saved in:
Bibliographic Details
Published inStructure (London) Vol. 20; no. 3; pp. 479 - 486
Main Authors Kirchdoerfer, Robert N., Herrin, Brantley R., Han, Byung Woo, Turnbough, Charles L., Cooper, Max D., Wilson, Ian A.
Format Journal Article
LanguageEnglish
Published United States Elsevier Inc 07.03.2012
Subjects
Online AccessGet full text

Cover

Loading…
Abstract Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA and VLRC) in function. Here, we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis, and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores. [Display omitted] ► VLRBs use their C-terminal LRRs and the LRRCT-loop to interact with antigen ► Sequence-related VLRBs exhibit differential recognition of their BclA epitopes ► VLR4 binds a conserved protein epitope, yet is specific for B. anthracis spores
AbstractList Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA and VLRC) in function. Here, we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis, and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores.Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA and VLRC) in function. Here, we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis, and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores.
Variable Lymphocyte Receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin-fold based T- and B-cell receptors, lymphocyte-like cells of jawless fish express VLRs (A, B or C) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA, C) in function. Here we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores.
Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA and VLRC) in function. Here, we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis, and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores. [Display omitted] ► VLRBs use their C-terminal LRRs and the LRRCT-loop to interact with antigen ► Sequence-related VLRBs exhibit differential recognition of their BclA epitopes ► VLR4 binds a conserved protein epitope, yet is specific for B. anthracis spores
Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA and VLRC) in function. Here, we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis, and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores.
Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA and VLRC) in function. Here, we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis, and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores.
Author Wilson, Ian A.
Kirchdoerfer, Robert N.
Han, Byung Woo
Herrin, Brantley R.
Turnbough, Charles L.
Cooper, Max D.
AuthorAffiliation 2 The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California 92037, United States
1 Department of Molecular Biology, The Scripps Research Institute, La Jolla, California 92037, United States
4 Department of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia 30322, United States
3 Emory Vaccine Center, Atlanta Georgia 30329, United States
5 Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul 151-742, Korea
6 University of Alabama at Birmingham, Department of Microbiology, Birmingham, AL 35294-2170, United States
AuthorAffiliation_xml – name: 4 Department of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia 30322, United States
– name: 3 Emory Vaccine Center, Atlanta Georgia 30329, United States
– name: 1 Department of Molecular Biology, The Scripps Research Institute, La Jolla, California 92037, United States
– name: 2 The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California 92037, United States
– name: 6 University of Alabama at Birmingham, Department of Microbiology, Birmingham, AL 35294-2170, United States
– name: 5 Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul 151-742, Korea
Author_xml – sequence: 1
  givenname: Robert N.
  surname: Kirchdoerfer
  fullname: Kirchdoerfer, Robert N.
  organization: Department of Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA
– sequence: 2
  givenname: Brantley R.
  surname: Herrin
  fullname: Herrin, Brantley R.
  organization: Emory Vaccine Center, Atlanta, GA 30329, USA
– sequence: 3
  givenname: Byung Woo
  surname: Han
  fullname: Han, Byung Woo
  organization: Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul 151-742, Korea
– sequence: 4
  givenname: Charles L.
  surname: Turnbough
  fullname: Turnbough, Charles L.
  organization: Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294-2170, USA
– sequence: 5
  givenname: Max D.
  surname: Cooper
  fullname: Cooper, Max D.
  organization: Emory Vaccine Center, Atlanta, GA 30329, USA
– sequence: 6
  givenname: Ian A.
  surname: Wilson
  fullname: Wilson, Ian A.
  email: wilson@scripps.edu
  organization: Department of Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA
BackLink https://www.ncbi.nlm.nih.gov/pubmed/22405006$$D View this record in MEDLINE/PubMed
BookMark eNqFkU1v1DAQhi1URLeFH8AF5cYpwXYSfwgJCSoolVZC4utqufak8Sqxg-1U2n-Ply0VcCgnjzXPO5rRc4ZOfPCA0HOCG4IJe7VrUo4NxYQ2mDQYy0doQwQXdUcEO0EbLJmsKaHsFJ2ltMMY0x7jJ-iU0g6Xim3Q-F1Hp68nqLb7eRmD2WeoPoOBJYd4KMKNd9kFX4WhyiNUV_O8-mDD7Lz2ubqc9iYsMWRwv5B32rhpWlNVmmMsn1R9WUKE9BQ9HvSU4Nnde46-fXj_9eJjvf10eXXxdlubnve5HoSAbrAcG-jNYCSxtGXQ4xY4cGE1H9jQcStbaXvJsWVUcmsMBdF3jNChPUdvjnOX9XoGa8DnqCe1RDfruFdBO_V3x7tR3YRb1bYtp0SUAS_vBsTwY4WU1eySgWnSHsKalGSCsFa2_P8k5aKlUvSFfPHnUvfb_PZQAHIETAwpRRjuEYLVwbXaqeJaHVwrTFRxXTL8n4xxWR9clbvc9GDy9TEJRcStg6iSceANWBfBZGWDeyD9ExDUxrQ
CitedBy_id crossref_primary_10_1002_bip_23348
crossref_primary_10_1186_s40064_015_1270_6
crossref_primary_10_1146_annurev_animal_022513_114201
crossref_primary_10_1126_sciadv_aar7653
crossref_primary_10_1002_prot_24851
crossref_primary_10_1021_acs_biochem_9b01015
crossref_primary_10_1002_eji_201343557
crossref_primary_10_1371_journal_pone_0085875
crossref_primary_10_1038_srep25308
crossref_primary_10_1146_annurev_biophys_083012_130422
crossref_primary_10_1007_s00251_020_01182_6
crossref_primary_10_1074_jbc_M113_480467
crossref_primary_10_1016_j_cellimm_2015_04_007
crossref_primary_10_1038_mto_2016_26
crossref_primary_10_1016_j_copbio_2018_02_016
crossref_primary_10_1016_j_jim_2012_08_016
crossref_primary_10_1371_journal_ppat_1003110
crossref_primary_10_1128_MCB_00077_17
crossref_primary_10_1002_prot_26768
crossref_primary_10_1016_j_jmb_2018_03_016
crossref_primary_10_1073_pnas_1415655111
crossref_primary_10_4049_jimmunol_1900675
crossref_primary_10_1016_j_bbapap_2015_09_005
crossref_primary_10_1038_srep19951
crossref_primary_10_1073_pnas_1302500110
crossref_primary_10_7554_eLife_07467
crossref_primary_10_1146_annurev_immunol_042617_053028
crossref_primary_10_1016_j_fsi_2024_109565
crossref_primary_10_4049_jimmunol_1800981
crossref_primary_10_1016_j_str_2017_09_003
crossref_primary_10_1021_acsbiomaterials_1c00018
crossref_primary_10_1038_s41598_018_29197_w
crossref_primary_10_1073_pnas_1314540110
crossref_primary_10_1158_2326_6066_CIR_13_0052
crossref_primary_10_1016_j_jbc_2021_100745
crossref_primary_10_1186_s13007_017_0180_8
crossref_primary_10_1016_j_jbc_2023_104689
crossref_primary_10_1038_s42003_020_0819_2
crossref_primary_10_1080_2162402X_2017_1407898
Cites_doi 10.1126/science.1119420
10.1128/JB.185.5.1555-1563.2003
10.1002/prot.21786
10.1126/science.1162484
10.1006/jmbi.1994.1334
10.1016/S0076-6879(97)76066-X
10.1038/nsmb.1619
10.1073/pnas.84.22.8075
10.1107/S0021889807021206
10.4049/jimmunol.176.10.6076
10.1107/S0907444904016427
10.1074/jbc.M401613200
10.1136/jcp.56.3.182
10.1007/s00018-008-8019-0
10.1002/prot.22971
10.1128/mBio.00084-11
10.1111/j.1365-2958.2008.06206.x
10.1073/pnas.1005475107
10.1128/AEM.69.1.593-599.2003
10.1128/JB.185.6.1903-1910.2003
10.1016/0263-7855(93)87010-3
10.1073/pnas.0711619105
10.1107/S0907444996012255
10.1128/JB.187.15.5310-5317.2005
10.1002/bit.21637
10.1016/j.cell.2006.02.001
10.1038/ni1463
10.1073/pnas.1001910107
10.1038/nature02740
10.1038/nature08068
10.1093/nar/gkm216
ContentType Journal Article
Copyright 2012 Elsevier Ltd
Copyright © 2012 Elsevier Ltd. All rights reserved.
2012 Elsevier Inc. All rights reserved. 2012
Copyright_xml – notice: 2012 Elsevier Ltd
– notice: Copyright © 2012 Elsevier Ltd. All rights reserved.
– notice: 2012 Elsevier Inc. All rights reserved. 2012
DBID 6I.
AAFTH
AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
7QL
7T5
C1K
H94
5PM
DOI 10.1016/j.str.2012.01.009
DatabaseName ScienceDirect Open Access Titles
Elsevier:ScienceDirect:Open Access
CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
MEDLINE - Academic
Bacteriology Abstracts (Microbiology B)
Immunology Abstracts
Environmental Sciences and Pollution Management
AIDS and Cancer Research Abstracts
PubMed Central (Full Participant titles)
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
MEDLINE - Academic
AIDS and Cancer Research Abstracts
Immunology Abstracts
Bacteriology Abstracts (Microbiology B)
Environmental Sciences and Pollution Management
DatabaseTitleList MEDLINE - Academic


MEDLINE
AIDS and Cancer Research Abstracts
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 1878-4186
EndPage 486
ExternalDocumentID PMC3337218
22405006
10_1016_j_str_2012_01_009
S0969212612000172
Genre Research Support, U.S. Gov't, Non-P.H.S
Research Support, Non-U.S. Gov't
Journal Article
Research Support, N.I.H., Extramural
GrantInformation_xml – fundername: NIAID NIH HHS
  grantid: AI081777
– fundername: NIAID NIH HHS
  grantid: AI072435
– fundername: NIAID NIH HHS
  grantid: R01 AI042266
– fundername: NCI NIH HHS
  grantid: Y1-CO-1020
– fundername: NIAID NIH HHS
  grantid: R37 AI042266
– fundername: NIGMS NIH HHS
  grantid: Y1-GM-1104
– fundername: NIAID NIH HHS
  grantid: AI042266
– fundername: NIAID NIH HHS
  grantid: R01 AI072435
– fundername: NIAID NIH HHS
  grantid: T32 AI007051
– fundername: National Institute of Allergy and Infectious Diseases Extramural Activities : NIAID
  grantid: R01 AI042266-05 || AI
– fundername: National Institute of Allergy and Infectious Diseases Extramural Activities : NIAID
  grantid: R01 AI072435-06 || AI
GroupedDBID ---
--K
-DZ
0R~
123
1RT
1~5
2WC
4.4
457
4G.
5VS
62-
6I.
7-5
AACTN
AAEDT
AAEDW
AAFTH
AAIAV
AAIKJ
AAKRW
AAUCE
AAVLU
AAXJY
AAXUO
ABJNI
ABMAC
ABMWF
ABVKL
ACGFS
ADBBV
ADEZE
ADJPV
AENEX
AEXQZ
AFTJW
AGHFR
AGKMS
AITUG
ALKID
ALMA_UNASSIGNED_HOLDINGS
AMRAJ
ASPBG
AVWKF
AZFZN
BAWUL
CS3
DIK
DU5
E3Z
EBS
EJD
F5P
FCP
FDB
FEDTE
FIRID
HH5
HVGLF
HZ~
IHE
IXB
J1W
JIG
LX5
M3Z
M41
NCXOZ
O-L
O9-
OK1
P2P
RCE
RIG
RNS
ROL
RPZ
SCP
SDG
SES
SSZ
TR2
WQ6
ZA5
~02
29Q
53G
6TJ
AALRI
AAMRU
AAQXK
AAYWO
AAYXX
ABDGV
ABEFU
ABWVN
ACRPL
ACVFH
ADCNI
ADMUD
ADNMO
ADVLN
AEUPX
AFFNX
AFPUW
AGCQF
AGQPQ
AHHHB
AIGII
AKAPO
AKBMS
AKRWK
AKYEP
APXCP
CAG
CITATION
COF
FGOYB
G-2
OZT
R2-
SEW
Y6R
ZXP
CGR
CUY
CVF
ECM
EFKBS
EIF
NPM
7X8
7QL
7T5
C1K
H94
5PM
ID FETCH-LOGICAL-c575t-f88e4fd70ce5cfc91d236e503e7e78da7f6f47d939d5970d6297dcc2e854612f3
IEDL.DBID IXB
ISSN 0969-2126
1878-4186
IngestDate Thu Aug 21 13:51:18 EDT 2025
Fri Jul 11 15:29:22 EDT 2025
Tue Aug 05 10:56:08 EDT 2025
Mon Jul 21 06:06:33 EDT 2025
Thu Apr 24 22:57:11 EDT 2025
Tue Jul 01 04:33:24 EDT 2025
Fri Feb 23 02:32:14 EST 2024
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 3
Language English
License http://www.elsevier.com/open-access/userlicense/1.0
https://www.elsevier.com/tdm/userlicense/1.0
Copyright © 2012 Elsevier Ltd. All rights reserved.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c575t-f88e4fd70ce5cfc91d236e503e7e78da7f6f47d939d5970d6297dcc2e854612f3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
OpenAccessLink https://www.sciencedirect.com/science/article/pii/S0969212612000172
PMID 22405006
PQID 927832985
PQPubID 23479
PageCount 8
ParticipantIDs pubmedcentral_primary_oai_pubmedcentral_nih_gov_3337218
proquest_miscellaneous_968163937
proquest_miscellaneous_927832985
pubmed_primary_22405006
crossref_primary_10_1016_j_str_2012_01_009
crossref_citationtrail_10_1016_j_str_2012_01_009
elsevier_sciencedirect_doi_10_1016_j_str_2012_01_009
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2012-03-07
PublicationDateYYYYMMDD 2012-03-07
PublicationDate_xml – month: 03
  year: 2012
  text: 2012-03-07
  day: 07
PublicationDecade 2010
PublicationPlace United States
PublicationPlace_xml – name: United States
PublicationTitle Structure (London)
PublicationTitleAlternate Structure
PublicationYear 2012
Publisher Elsevier Inc
Publisher_xml – name: Elsevier Inc
References Swiecki, Lisanby, Shu, Turnbough, Kearney (bib28) 2006; 176
Cooper, Alder (bib7) 2006; 124
Sylvestre, Couture-Tosi, Mock (bib29) 2003; 185
Higgins, Cooper, Schroeder-Tucker, Black, Miller, Karns, Manthey, Breeze, Perdue (bib14) 2003; 69
McDonald, Thornton (bib19) 1994; 238
Guo, Hirano, Herrin, Li, Yu, Sadlonova, Cooper (bib11) 2009; 459
Steichen, Chen, Kearney, Turnbough (bib27) 2003; 185
Blanc, Roversi, Vonrhein, Flensburg, Lea, Bricogne (bib4) 2004; 60
Han, Herrin, Cooper, Wilson (bib12) 2008; 321
Boydston, Chen, Steichen, Turnbough (bib5) 2005; 187
Murshudov, Vagin, Dodson (bib20) 1997; 53
Pancer, Amemiya, Ehrhardt, Ceitlin, Gartland, Cooper (bib23) 2004; 430
Connolly (bib6) 1993; 11
Bella, Hindle, McEwan, Lovell (bib3) 2008; 65
Ball, Taylor, Todd, Redmond, Couture-Tosi, Sylvestre, Moir, Bullough (bib2) 2008; 68
Daubenspeck, Zeng, Chen, Dong, Steichen, Krishna, Pritchard, Turnbough (bib8) 2004; 279
Davis, Leaver-Fay, Chen, Block, Kapral, Wang, Murray, Arendall, Snoeyink, Richardson, Richardson (bib9) 2007; 35
Rogozin, Iyer, Liang, Glazko, Liston, Pavlov, Aravind, Pancer (bib24) 2007; 8
Spencer (bib26) 2003; 56
Sheriff, Silverton, Padlan, Cohen, Smith-Gill, Finzel, Davies (bib25) 1987; 84
Otwinoski, Minor (bib22) 1997; 276
Deng, Velikovsky, Xu, Iyer, Tasumi, Kerzic, Flajnik, Aravind, Pancer, Mariuzza (bib10) 2010; 107
Nuttall, Wilkins, Streltsov, Pontes-Braz, Dolezal, Tran, Liu (bib21) 2011; 79
Kasamatsu, Sutoh, Fugo, Otsuka, Iwabuchi, Kasahara (bib15) 2010; 107
Klock, Koesema, Knuth, Lesley (bib16) 2008; 71
Alder, Rogozin, Iyer, Glazko, Cooper, Pancer (bib1) 2005; 310
Velikovsky, Deng, Tasumi, Iyer, Kerzic, Aravind, Pancer, Mariuzza (bib31) 2009; 16
Liu, Nuttall, Tran, Wilkins, Streltsov, Alderton (bib17) 2008; 99
Tan, Li, Turnbough (bib30) 2011; 2
Herrin, Alder, Roux, Sina, Ehrhardt, Boydston, Turnbough, Cooper (bib13) 2008; 105
McCoy, Grosse-Kunstleve, Adams, Winn, Storoni, Read (bib18) 2007; 40
Cooper (10.1016/j.str.2012.01.009_bib7) 2006; 124
Daubenspeck (10.1016/j.str.2012.01.009_bib8) 2004; 279
Boydston (10.1016/j.str.2012.01.009_bib5) 2005; 187
Guo (10.1016/j.str.2012.01.009_bib11) 2009; 459
Velikovsky (10.1016/j.str.2012.01.009_bib31) 2009; 16
Nuttall (10.1016/j.str.2012.01.009_bib21) 2011; 79
Otwinoski (10.1016/j.str.2012.01.009_bib22) 1997; 276
Klock (10.1016/j.str.2012.01.009_bib16) 2008; 71
Herrin (10.1016/j.str.2012.01.009_bib13) 2008; 105
Liu (10.1016/j.str.2012.01.009_bib17) 2008; 99
Murshudov (10.1016/j.str.2012.01.009_bib20) 1997; 53
Davis (10.1016/j.str.2012.01.009_bib9) 2007; 35
Blanc (10.1016/j.str.2012.01.009_bib4) 2004; 60
Connolly (10.1016/j.str.2012.01.009_bib6) 1993; 11
Deng (10.1016/j.str.2012.01.009_bib10) 2010; 107
Sylvestre (10.1016/j.str.2012.01.009_bib29) 2003; 185
Spencer (10.1016/j.str.2012.01.009_bib26) 2003; 56
McCoy (10.1016/j.str.2012.01.009_bib18) 2007; 40
Higgins (10.1016/j.str.2012.01.009_bib14) 2003; 69
Ball (10.1016/j.str.2012.01.009_bib2) 2008; 68
McDonald (10.1016/j.str.2012.01.009_bib19) 1994; 238
Kasamatsu (10.1016/j.str.2012.01.009_bib15) 2010; 107
Pancer (10.1016/j.str.2012.01.009_bib23) 2004; 430
Tan (10.1016/j.str.2012.01.009_bib30) 2011; 2
Alder (10.1016/j.str.2012.01.009_bib1) 2005; 310
Han (10.1016/j.str.2012.01.009_bib12) 2008; 321
Sheriff (10.1016/j.str.2012.01.009_bib25) 1987; 84
Rogozin (10.1016/j.str.2012.01.009_bib24) 2007; 8
Bella (10.1016/j.str.2012.01.009_bib3) 2008; 65
Steichen (10.1016/j.str.2012.01.009_bib27) 2003; 185
Swiecki (10.1016/j.str.2012.01.009_bib28) 2006; 176
References_xml – volume: 124
  start-page: 815
  year: 2006
  end-page: 822
  ident: bib7
  article-title: The evolution of adaptive immune systems
  publication-title: Cell
– volume: 238
  start-page: 777
  year: 1994
  end-page: 793
  ident: bib19
  article-title: Satisfying hydrogen bonding potential in proteins
  publication-title: J. Mol. Biol.
– volume: 35
  start-page: W375
  year: 2007
  end-page: W383
  ident: bib9
  article-title: MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
  publication-title: Nucleic Acids Res.
– volume: 185
  start-page: 1903
  year: 2003
  end-page: 1910
  ident: bib27
  article-title: Identification of the immunodominant protein and other proteins of the
  publication-title: J. Bacteriol.
– volume: 56
  start-page: 182
  year: 2003
  end-page: 187
  ident: bib26
  publication-title: J. Clin. Pathol.
– volume: 459
  start-page: 796
  year: 2009
  end-page: 801
  ident: bib11
  article-title: Dual nature of the adaptive immune system in lampreys
  publication-title: Nature
– volume: 99
  start-page: 774
  year: 2008
  end-page: 782
  ident: bib17
  article-title: Construction, crystal structure and application of a recombinant protein that lacks the collagen-like region of BclA from
  publication-title: Biotechnol. Bioeng.
– volume: 60
  start-page: 2210
  year: 2004
  end-page: 2221
  ident: bib4
  article-title: Refinement of severely incomplete structures with maximum likelihood in BUSTER-TNT
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
– volume: 8
  start-page: 647
  year: 2007
  end-page: 656
  ident: bib24
  article-title: Evolution and diversification of lamprey antigen receptors: evidence for involvement of an AID-APOBEC family cytosine deaminase
  publication-title: Nat. Immunol.
– volume: 53
  start-page: 240
  year: 1997
  end-page: 255
  ident: bib20
  article-title: Refinement of macromolecular structures by the maximum-likelihood method
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
– volume: 40
  start-page: 658
  year: 2007
  end-page: 674
  ident: bib18
  article-title: Phaser crystallographic software
  publication-title: J. Appl. Cryst.
– volume: 68
  start-page: 947
  year: 2008
  end-page: 958
  ident: bib2
  article-title: Structure of the exosporium and sublayers of spores of the
  publication-title: Mol. Microbiol.
– volume: 79
  start-page: 1306
  year: 2011
  end-page: 1317
  ident: bib21
  article-title: Isolation, kinetic analysis, and structural characterization of an antibody targeting the
  publication-title: Proteins
– volume: 185
  start-page: 1555
  year: 2003
  end-page: 1563
  ident: bib29
  article-title: Polymorphism in the collagen-like region of the
  publication-title: J. Bacteriol.
– volume: 16
  start-page: 725
  year: 2009
  end-page: 730
  ident: bib31
  article-title: Structure of a lamprey variable lymphocyte receptor in complex with a protein antigen
  publication-title: Nat. Struct. Mol. Biol.
– volume: 65
  start-page: 2307
  year: 2008
  end-page: 2333
  ident: bib3
  article-title: The leucine-rich repeat structure
  publication-title: Cell. Mol. Life Sci.
– volume: 69
  start-page: 593
  year: 2003
  end-page: 599
  ident: bib14
  article-title: A field investigation of
  publication-title: Appl. Environ. Microbiol.
– volume: 310
  start-page: 1970
  year: 2005
  end-page: 1973
  ident: bib1
  article-title: Diversity and function of adaptive immune receptors in a jawless vertebrate
  publication-title: Science
– volume: 107
  start-page: 14304
  year: 2010
  end-page: 14308
  ident: bib15
  article-title: Identification of a third variable lymphocyte receptor in the lamprey
  publication-title: Proc. Natl. Acad. Sci. USA
– volume: 2
  year: 2011
  ident: bib30
  article-title: An unusual mechanism of isopeptide bond formation attaches the collagen-like glycoprotein BclA to the exosporium of
  publication-title: MBio
– volume: 187
  start-page: 5310
  year: 2005
  end-page: 5317
  ident: bib5
  article-title: Orientation within the exosporium and structural stability of the collagen-like glycoprotein BclA of
  publication-title: J. Bacteriol.
– volume: 279
  start-page: 30945
  year: 2004
  end-page: 30953
  ident: bib8
  article-title: Novel oligosaccharide side chains of the collagen-like region of BclA, the major glycoprotein of the
  publication-title: J. Biol. Chem.
– volume: 107
  start-page: 13408
  year: 2010
  end-page: 13413
  ident: bib10
  article-title: A structural basis for antigen recognition by the T cell-like lymphocytes of sea lamprey
  publication-title: Proc. Natl. Acad. Sci. USA
– volume: 84
  start-page: 8075
  year: 1987
  end-page: 8079
  ident: bib25
  article-title: Three-dimensional structure of an antibody-antigen complex
  publication-title: Proc. Natl. Acad. Sci. USA
– volume: 430
  start-page: 174
  year: 2004
  end-page: 180
  ident: bib23
  article-title: Somatic diversification of variable lymphocyte receptors in the agnathan sea lamprey
  publication-title: Nature
– volume: 321
  start-page: 1834
  year: 2008
  end-page: 1837
  ident: bib12
  article-title: Antigen recognition by variable lymphocyte receptors
  publication-title: Science
– volume: 176
  start-page: 6076
  year: 2006
  end-page: 6084
  ident: bib28
  article-title: Monoclonal antibodies for
  publication-title: J. Immunol.
– volume: 71
  start-page: 982
  year: 2008
  end-page: 994
  ident: bib16
  article-title: Combining the polymerase incomplete primer extension method for cloning and mutagenesis with microscreening to accelerate structural genomics efforts
  publication-title: Proteins
– volume: 276
  start-page: 307
  year: 1997
  end-page: 326
  ident: bib22
  article-title: Processing of x-ray diffraction data collected in oscillation mode
  publication-title: Methods Enzymol.
– volume: 105
  start-page: 2040
  year: 2008
  end-page: 2045
  ident: bib13
  article-title: Structure and specificity of lamprey monoclonal antibodies
  publication-title: Proc. Natl. Acad. Sci. USA
– volume: 11
  start-page: 139
  year: 1993
  end-page: 141
  ident: bib6
  article-title: The molecular surface package
  publication-title: J. Mol. Graph.
– volume: 310
  start-page: 1970
  year: 2005
  ident: 10.1016/j.str.2012.01.009_bib1
  article-title: Diversity and function of adaptive immune receptors in a jawless vertebrate
  publication-title: Science
  doi: 10.1126/science.1119420
– volume: 185
  start-page: 1555
  year: 2003
  ident: 10.1016/j.str.2012.01.009_bib29
  article-title: Polymorphism in the collagen-like region of the Bacillus anthracis BclA protein leads to variation in exosporium filament length
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.185.5.1555-1563.2003
– volume: 71
  start-page: 982
  year: 2008
  ident: 10.1016/j.str.2012.01.009_bib16
  article-title: Combining the polymerase incomplete primer extension method for cloning and mutagenesis with microscreening to accelerate structural genomics efforts
  publication-title: Proteins
  doi: 10.1002/prot.21786
– volume: 321
  start-page: 1834
  year: 2008
  ident: 10.1016/j.str.2012.01.009_bib12
  article-title: Antigen recognition by variable lymphocyte receptors
  publication-title: Science
  doi: 10.1126/science.1162484
– volume: 238
  start-page: 777
  year: 1994
  ident: 10.1016/j.str.2012.01.009_bib19
  article-title: Satisfying hydrogen bonding potential in proteins
  publication-title: J. Mol. Biol.
  doi: 10.1006/jmbi.1994.1334
– volume: 276
  start-page: 307
  year: 1997
  ident: 10.1016/j.str.2012.01.009_bib22
  article-title: Processing of x-ray diffraction data collected in oscillation mode
  publication-title: Methods Enzymol.
  doi: 10.1016/S0076-6879(97)76066-X
– volume: 16
  start-page: 725
  year: 2009
  ident: 10.1016/j.str.2012.01.009_bib31
  article-title: Structure of a lamprey variable lymphocyte receptor in complex with a protein antigen
  publication-title: Nat. Struct. Mol. Biol.
  doi: 10.1038/nsmb.1619
– volume: 84
  start-page: 8075
  year: 1987
  ident: 10.1016/j.str.2012.01.009_bib25
  article-title: Three-dimensional structure of an antibody-antigen complex
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.84.22.8075
– volume: 40
  start-page: 658
  year: 2007
  ident: 10.1016/j.str.2012.01.009_bib18
  article-title: Phaser crystallographic software
  publication-title: J. Appl. Cryst.
  doi: 10.1107/S0021889807021206
– volume: 176
  start-page: 6076
  year: 2006
  ident: 10.1016/j.str.2012.01.009_bib28
  article-title: Monoclonal antibodies for Bacillus anthracis spore detection and functional analyses of spore germination and outgrowth
  publication-title: J. Immunol.
  doi: 10.4049/jimmunol.176.10.6076
– volume: 60
  start-page: 2210
  year: 2004
  ident: 10.1016/j.str.2012.01.009_bib4
  article-title: Refinement of severely incomplete structures with maximum likelihood in BUSTER-TNT
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444904016427
– volume: 279
  start-page: 30945
  year: 2004
  ident: 10.1016/j.str.2012.01.009_bib8
  article-title: Novel oligosaccharide side chains of the collagen-like region of BclA, the major glycoprotein of the Bacillus anthracis exosporium
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M401613200
– volume: 56
  start-page: 182
  year: 2003
  ident: 10.1016/j.str.2012.01.009_bib26
  article-title: Bacillus anthracis
  publication-title: J. Clin. Pathol.
  doi: 10.1136/jcp.56.3.182
– volume: 65
  start-page: 2307
  year: 2008
  ident: 10.1016/j.str.2012.01.009_bib3
  article-title: The leucine-rich repeat structure
  publication-title: Cell. Mol. Life Sci.
  doi: 10.1007/s00018-008-8019-0
– volume: 79
  start-page: 1306
  year: 2011
  ident: 10.1016/j.str.2012.01.009_bib21
  article-title: Isolation, kinetic analysis, and structural characterization of an antibody targeting the Bacillus anthracis major spore surface protein BclA
  publication-title: Proteins
  doi: 10.1002/prot.22971
– volume: 2
  year: 2011
  ident: 10.1016/j.str.2012.01.009_bib30
  article-title: An unusual mechanism of isopeptide bond formation attaches the collagen-like glycoprotein BclA to the exosporium of Bacillus anthracis
  publication-title: MBio
  doi: 10.1128/mBio.00084-11
– volume: 68
  start-page: 947
  year: 2008
  ident: 10.1016/j.str.2012.01.009_bib2
  article-title: Structure of the exosporium and sublayers of spores of the Bacillus cereus family revealed by electron crystallography
  publication-title: Mol. Microbiol.
  doi: 10.1111/j.1365-2958.2008.06206.x
– volume: 107
  start-page: 13408
  year: 2010
  ident: 10.1016/j.str.2012.01.009_bib10
  article-title: A structural basis for antigen recognition by the T cell-like lymphocytes of sea lamprey
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1005475107
– volume: 69
  start-page: 593
  year: 2003
  ident: 10.1016/j.str.2012.01.009_bib14
  article-title: A field investigation of Bacillus anthracis contamination of U.S. Department of Agriculture and other Washington, D.C., buildings during the anthrax attack of October 2001
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.69.1.593-599.2003
– volume: 185
  start-page: 1903
  year: 2003
  ident: 10.1016/j.str.2012.01.009_bib27
  article-title: Identification of the immunodominant protein and other proteins of the Bacillus anthracis exosporium
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.185.6.1903-1910.2003
– volume: 11
  start-page: 139
  year: 1993
  ident: 10.1016/j.str.2012.01.009_bib6
  article-title: The molecular surface package
  publication-title: J. Mol. Graph.
  doi: 10.1016/0263-7855(93)87010-3
– volume: 105
  start-page: 2040
  year: 2008
  ident: 10.1016/j.str.2012.01.009_bib13
  article-title: Structure and specificity of lamprey monoclonal antibodies
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0711619105
– volume: 53
  start-page: 240
  year: 1997
  ident: 10.1016/j.str.2012.01.009_bib20
  article-title: Refinement of macromolecular structures by the maximum-likelihood method
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444996012255
– volume: 187
  start-page: 5310
  year: 2005
  ident: 10.1016/j.str.2012.01.009_bib5
  article-title: Orientation within the exosporium and structural stability of the collagen-like glycoprotein BclA of Bacillus anthracis
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.187.15.5310-5317.2005
– volume: 99
  start-page: 774
  year: 2008
  ident: 10.1016/j.str.2012.01.009_bib17
  article-title: Construction, crystal structure and application of a recombinant protein that lacks the collagen-like region of BclA from Bacillus anthracis spores
  publication-title: Biotechnol. Bioeng.
  doi: 10.1002/bit.21637
– volume: 124
  start-page: 815
  year: 2006
  ident: 10.1016/j.str.2012.01.009_bib7
  article-title: The evolution of adaptive immune systems
  publication-title: Cell
  doi: 10.1016/j.cell.2006.02.001
– volume: 8
  start-page: 647
  year: 2007
  ident: 10.1016/j.str.2012.01.009_bib24
  article-title: Evolution and diversification of lamprey antigen receptors: evidence for involvement of an AID-APOBEC family cytosine deaminase
  publication-title: Nat. Immunol.
  doi: 10.1038/ni1463
– volume: 107
  start-page: 14304
  year: 2010
  ident: 10.1016/j.str.2012.01.009_bib15
  article-title: Identification of a third variable lymphocyte receptor in the lamprey
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1001910107
– volume: 430
  start-page: 174
  year: 2004
  ident: 10.1016/j.str.2012.01.009_bib23
  article-title: Somatic diversification of variable lymphocyte receptors in the agnathan sea lamprey
  publication-title: Nature
  doi: 10.1038/nature02740
– volume: 459
  start-page: 796
  year: 2009
  ident: 10.1016/j.str.2012.01.009_bib11
  article-title: Dual nature of the adaptive immune system in lampreys
  publication-title: Nature
  doi: 10.1038/nature08068
– volume: 35
  start-page: W375
  issue: Web Server issue
  year: 2007
  ident: 10.1016/j.str.2012.01.009_bib9
  article-title: MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkm216
SSID ssj0002500
Score 2.2606237
Snippet Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In...
Variable Lymphocyte Receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In...
SourceID pubmedcentral
proquest
pubmed
crossref
elsevier
SourceType Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 479
SubjectTerms Animals
Bacillus anthracis
Bacillus anthracis - chemistry
Cloning, Molecular
Crystallography
Glycoproteins - chemistry
Glycoproteins - metabolism
Immunodominant Epitopes - chemistry
Immunodominant Epitopes - metabolism
Lampreys - immunology
Models, Molecular
Mutagenesis
Protein Binding
Receptors, Immunologic - chemistry
Spores, Bacterial - chemistry
Title Variable Lymphocyte Receptor Recognition of the Immunodominant Glycoprotein of Bacillus anthracis Spores
URI https://dx.doi.org/10.1016/j.str.2012.01.009
https://www.ncbi.nlm.nih.gov/pubmed/22405006
https://www.proquest.com/docview/927832985
https://www.proquest.com/docview/968163937
https://pubmed.ncbi.nlm.nih.gov/PMC3337218
Volume 20
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lj9MwELZWi5C4IN6Ux8oHTkihSe3E9nF3xbKwiAOw0JuV2GNtUJVUJD303zPjJBUF1AO3OJlIiceZ-cb5ZoaxV1lQABLSxOuwSGTlssS4XCTSl0IJ0L4Isdrnp-LyWn5Y5ssjdj7lwhCtcrT9g02P1no8Mx9nc76u6_kXBN8GDS-66Fj1heywkDom8S3PdtYYXXzcZ0HhhKSnP5uR49X1VBKUtgOzNylxEv_tm_7Gnn9SKH_zSRf32N0RTPLT4XnvsyNoHrDbQ3vJ7UN28w0DYUqN4h-3qLTWbXvgiBNhjYE2HQzUobbhbeAIBPl7ShbBOHWgx_B3q61rYyGHOoqcla5erTYdL6m7Ag46Tk3SoXvEri_efj2_TMbOColDeNYnQWuQwavUQe6CM5lfiALyVIACpX2pQhGk8kYYjwFH6ouFUd65Behc4nwH8ZgdN20DTxl3mVY-J7oKOFkZjD5MEUwVqiArX2bZjKXTnFo3lh2n7hcrO_HLflhUgyU12DSzqIYZe727ZT3U3DgkLCdF2b2FY9EnHLqNT0q1-EHRX5KygXbTWUO9RxZG5wdECo0wFoHdjD0ZlsHuOQkh4YorZkztLZCdAJXz3r_S1DexrLcQAsNx_ez_Xug5u0OjSI9TL9hx_3MDLxEv9dUJu3V69fn71Un8MH4BNOUYtw
linkProvider Elsevier
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lj9MwELZWixBc0C7Psjx84IQUmsRObB_ZFUsLZS_sot6sxA9tUJVUJD303zPjJBWFVQ_ckngiJZ7JzDfO5xlC3iVeOMddHFnp04iXJomUyVjEbcEEc9LmPlT7vMpnN_zLMlsekYtxLwzSKgff3_v04K2HK9NhNqfrqpp-B_CtwPFCiA5VX8AP3wM0ILB_w3x5vnPHEOPDQgtIRyg-_toMJK-2w5qguB6YfIiRlHh3cPoXfP7NofwjKF2ekEcDmqQf-wc-JUeufkzu9_0lt0_I7Q_IhHFvFF1sQWuN2XaOAlB0a8i08aDnDjU1bTwFJEjnuFsEEtWeH0M_r7amCZUcqiByXphqtdq0tMD2CnDSUuyS7tqn5Oby0_XFLBpaK0QG8FkXeSkd91bExmXGG5XYlOUui5kTTkhbCJ97LqxiykLGEds8VcIakzqZcZhwz56R47qp3QtCTSKFzZCv4gwvFaQfKveq9KXnpS2SZELicU61GeqOY_uLlR4JZj81qEGjGnScaFDDhLzf3bLui24cEuajovSe5WgICoduo6NSNXxR-JukqF2zabXC5iOpktkBkVwCjgVkNyHPezPYPSdCJLC4fELEnoHsBLCe9_5IXd2Gut6MMcjH5cv_e6G35MHs-ttCL-ZXX8_IQxwJXDnxihx3vzbuNYCnrnwTPo7fdYwaMw
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Variable+Lymphocyte+Receptor+Recognition+of+the+Immunodominant+Glycoprotein+of+Bacillus+anthracis+Spores&rft.jtitle=Structure+%28London%29&rft.au=Kirchdoerfer%2C+Robert+N.&rft.au=Herrin%2C+Brantley+R.&rft.au=Han%2C+Byung+Woo&rft.au=Turnbough%2C+Charles+L.&rft.date=2012-03-07&rft.issn=0969-2126&rft.eissn=1878-4186&rft.volume=20&rft.issue=3&rft.spage=479&rft.epage=486&rft_id=info:doi/10.1016%2Fj.str.2012.01.009&rft_id=info%3Apmid%2F22405006&rft.externalDocID=PMC3337218
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0969-2126&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0969-2126&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0969-2126&client=summon