MGI short-read genome assemblies of Pythium insidiosum (reclassified as Pythium periculosum) strains Pi057C3 and Pi050C3

Pythium insidiosum causes a difficult-to-treat infectious condition called pythiosis, with high morbidity and mortality. So far, genome data of at least 10 strains of P. insidiosum, primarily classified in the phylogenetic clades I and II, have been sequenced using various next-generation sequencing...

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Published inBMC research notes Vol. 16; no. 1; pp. 1 - 316
Main Authors Krajaejun, Theerapong, Patumcharoenpol, Preecha, Rujirawat, Thidarat, Kittichotirat, Weerayuth, Tangphatsornruang, Sithichoke
Format Journal Article
LanguageEnglish
Published London BioMed Central Ltd 06.11.2023
BioMed Central
BMC
Subjects
Anopheles
Data Note
Deoxyribonucleic acid
DNA
Genome
Genomes
Genomics
Health aspects
Information storage
MGI
Morbidity
Next-generation sequencing
Pathogens
Phylogeny
Pythiosis
Pythium
Pythium insidiosum
Software
Thailand
Australia
United States > US
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Summary:Pythium insidiosum causes a difficult-to-treat infectious condition called pythiosis, with high morbidity and mortality. So far, genome data of at least 10 strains of P. insidiosum, primarily classified in the phylogenetic clades I and II, have been sequenced using various next-generation sequencing platforms. The MGI short-read platform was employed to obtain genome data of 2 clade-III strains of P. insidiosum (recently reclassified as Pythium periculosum) from patients in Thailand and the United States. This work is a part of our attempt to generate a comprehensive genome database from diverse pathogen strains.
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ISSN:1756-0500
1756-0500
DOI:10.1186/s13104-023-06587-6