Challenges in studies on flowering time: interfaces between phenological research and the molecular network of flowering genes
Flowering time is a well-studied subject in ecology, evolution and molecular biology. Long-term phenological studies have shown relationships between flowering time and environmental and endogenous factors in many species. In contrast, molecular studies using model plants have revealed a complex reg...
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| Published in | Ecological research Vol. 28; no. 2; pp. 161 - 172 |
|---|---|
| Main Authors | , |
| Format | Journal Article |
| Language | English |
| Published |
Japan
Springer Japan
01.03.2013
Blackwell Publishing Ltd |
| Subjects | |
| Online Access | Get full text |
| ISSN | 0912-3814 1440-1703 |
| DOI | 10.1007/s11284-011-0835-2 |
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| Abstract | Flowering time is a well-studied subject in ecology, evolution and molecular biology. Long-term phenological studies have shown relationships between flowering time and environmental and endogenous factors in many species. In contrast, molecular studies using model plants have revealed a complex regulatory network of flowering. We propose that flowering would be a model trait for the integrated study of ecology, evolution and molecular biology. We introduce briefly the flowering regulatory pathways of
Arabidopsis thaliana
, followed by molecular techniques such as transgenic manipulation, quantitative real-time PCR and detection of differentially expressed genes that could facilitate the study of ‘nonmodel’ species of ecological interest but with little available genome information. Application of the flowering gene network to wild species will be illustrated by two examples: modeling and prediction of the expression of flowering genes in
Arabidopsis halleri
, and the latitudinal cline of bud set and cessation in
Populus
. Finally, we discuss the challenges in integrating knowledge of the regulatory network on flowering into ecologically unique flowering phenomena such as synchronous intermittent mass flowering—the topic of this special issue. |
|---|---|
| AbstractList | Flowering time is a well-studied subject in ecology, evolution and molecular biology. Long-term phenological studies have shown relationships between flowering time and environmental and endogenous factors in many species. In contrast, molecular studies using model plants have revealed a complex regulatory network of flowering. We propose that flowering would be a model trait for the integrated study of ecology, evolution and molecular biology. We introduce briefly the flowering regulatory pathways of Arabidopsis thaliana, followed by molecular techniques such as transgenic manipulation, quantitative real-time PCR and detection of differentially expressed genes that could facilitate the study of 'nonmodel' species of ecological interest but with little available genome information. Application of the flowering gene network to wild species will be illustrated by two examples: modeling and prediction of the expression of flowering genes in Arabidopsis halleri, and the latitudinal cline of bud set and cessation in Populus. Finally, we discuss the challenges in integrating knowledge of the regulatory network on flowering into ecologically unique flowering phenomena such as synchronous intermittent mass flowering-the topic of this special issue. Flowering time is a well-studied subject in ecology, evolution and molecular biology. Long-term phenological studies have shown relationships between flowering time and environmental and endogenous factors in many species. In contrast, molecular studies using model plants have revealed a complex regulatory network of flowering. We propose that flowering would be a model trait for the integrated study of ecology, evolution and molecular biology. We introduce briefly the flowering regulatory pathways of Arabidopsis thaliana , followed by molecular techniques such as transgenic manipulation, quantitative real-time PCR and detection of differentially expressed genes that could facilitate the study of ‘nonmodel’ species of ecological interest but with little available genome information. Application of the flowering gene network to wild species will be illustrated by two examples: modeling and prediction of the expression of flowering genes in Arabidopsis halleri , and the latitudinal cline of bud set and cessation in Populus . Finally, we discuss the challenges in integrating knowledge of the regulatory network on flowering into ecologically unique flowering phenomena such as synchronous intermittent mass flowering—the topic of this special issue. Issue Title: Special Feature on New insights into mechanism and evolution of mast flowering: feedback between theory and experiment Flowering time is a well-studied subject in ecology, evolution and molecular biology. Long-term phenological studies have shown relationships between flowering time and environmental and endogenous factors in many species. In contrast, molecular studies using model plants have revealed a complex regulatory network of flowering. We propose that flowering would be a model trait for the integrated study of ecology, evolution and molecular biology. We introduce briefly the flowering regulatory pathways of Arabidopsis thaliana, followed by molecular techniques such as transgenic manipulation, quantitative real-time PCR and detection of differentially expressed genes that could facilitate the study of â[euro] nonmodelâ[euro](TM) species of ecological interest but with little available genome information. Application of the flowering gene network to wild species will be illustrated by two examples: modeling and prediction of the expression of flowering genes in Arabidopsis halleri, and the latitudinal cline of bud set and cessation in Populus. Finally, we discuss the challenges in integrating knowledge of the regulatory network on flowering into ecologically unique flowering phenomena such as synchronous intermittent mass floweringâ[euro]"the topic of this special issue.[PUBLICATION ABSTRACT] |
| Author | Shimizu, Kentaro K. Kobayashi, Masaki J. |
| Author_xml | – sequence: 1 givenname: Masaki J. surname: Kobayashi fullname: Kobayashi, Masaki J. organization: Institute of Plant Biology, URPP Systems Biology/Functional Genomics and Zurich-Basel Plant Science Center, University of Zurich – sequence: 2 givenname: Kentaro K. surname: Shimizu fullname: Shimizu, Kentaro K. email: shimizu@botinst.uzh.ch organization: Institute of Plant Biology, URPP Systems Biology/Functional Genomics and Zurich-Basel Plant Science Center, University of Zurich |
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| CitedBy_id | crossref_primary_10_1007_s11284_017_1466_z crossref_primary_10_1016_j_cosust_2018_03_005 crossref_primary_10_1038_s42003_021_02682_1 crossref_primary_10_6090_jarq_57_139 crossref_primary_10_1111_nph_14114 crossref_primary_10_3390_f9090516 crossref_primary_10_1002_ajb2_1557 crossref_primary_10_1093_jpe_rtv008 |
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| Copyright | The Ecological Society of Japan 2011 2013 The Ecological Society of Japan The Ecological Society of Japan 2013 |
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| Keywords | General flowering Mass flowering Flowering time Dipterocarpaceae Phenology |
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| Snippet | Flowering time is a well-studied subject in ecology, evolution and molecular biology. Long-term phenological studies have shown relationships between flowering... Flowering time is a well‐studied subject in ecology, evolution and molecular biology. Long‐term phenological studies have shown relationships between flowering... Issue Title: Special Feature on New insights into mechanism and evolution of mast flowering: feedback between theory and experiment Flowering time is a... |
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| SubjectTerms | Arabidopsis halleri Arabidopsis thaliana Behavioral Sciences Biomedical and Life Sciences buds Dipterocarpaceae Ecology environmental factors evolution Evolutionary Biology flowering Flowering time Forestry gene expression General flowering genes Life Sciences Mass flowering Molecular biology Phenology Plant Sciences polymerase chain reaction Populus prediction Special Feature Zoology |
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| Title | Challenges in studies on flowering time: interfaces between phenological research and the molecular network of flowering genes |
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