Burkholderia pseudomallei protein microarray reveals serodiagnostic and cross-reactive antigens

Understanding the way in which the immune system responds to infection is central to the development of vaccines and many diagnostics. To provide insight into this area, we fabricated a protein microarray containing 1,205 Burkholderia pseudomallei proteins, probed it with 88 melioidosis patient sera...

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Published inProceedings of the National Academy of Sciences - PNAS Vol. 106; no. 32; pp. 13499 - 13504
Main Authors Felgner, Philip L, Kayala, Matthew A, Vigil, Adam, Burk, Chad, Nakajima-Sasaki, Rie, Pablo, Jozelyn, Molina, Douglas M, Hirst, Siddiqua, Chew, Janet S.W, Wang, Dongling, Tan, Gladys, Duffield, Melanie, Yang, Ron, Neel, Julien, Chantratita, Narisara, Bancroft, Greg, Lertmemongkolchai, Ganjana, Davies, D. Huw, Baldi, Pierre, Peacock, Sharon, Titball, Richard W
Format Journal Article
LanguageEnglish
Published United States National Academy of Sciences 11.08.2009
National Acad Sciences
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Abstract Understanding the way in which the immune system responds to infection is central to the development of vaccines and many diagnostics. To provide insight into this area, we fabricated a protein microarray containing 1,205 Burkholderia pseudomallei proteins, probed it with 88 melioidosis patient sera, and identified 170 reactive antigens. This subset of antigens was printed on a smaller array and probed with a collection of 747 individual sera derived from 10 patient groups including melioidosis patients from Northeast Thailand and Singapore, patients with different infections, healthy individuals from the USA, and from endemic and nonendemic regions of Thailand. We identified 49 antigens that are significantly more reactive in melioidosis patients than healthy people and patients with other types of bacterial infections. We also identified 59 cross-reactive antigens that are equally reactive among all groups, including healthy controls from the USA. Using these results we were able to devise a test that can classify melioidosis positive and negative individuals with sensitivity and specificity of 95% and 83%, respectively, a significant improvement over currently available diagnostic assays. Half of the reactive antigens contained a predicted signal peptide sequence and were classified as outer membrane, surface structures or secreted molecules, and an additional 20% were associated with pathogenicity, adaptation or chaperones. These results show that microarrays allow a more comprehensive analysis of the immune response on an antigen-specific, patient-specific, and population-specific basis, can identify serodiagnostic antigens, and contribute to a more detailed understanding of immunogenicity to this pathogen.
AbstractList Understanding the way in which the immune system responds to infection is central to the development of vaccines and many diagnostics. To provide insight into this area, we fabricated a protein microarray containing 1,205 Burkholderia pseudomallei proteins, probed it with 88 melioidosis patient sera, and identified 170 reactive antigens. This subset of antigens was printed on a smaller array and probed with a collection of 747 individual sera derived from 10 patient groups including melioidosis patients from Northeast Thailand and Singapore, patients with different infections, healthy individuals from the USA, and from endemic and nonendemic regions of Thailand. We identified 49 antigens that are significantly more reactive in melioidosis patients than healthy people and patients with other types of bacterial infections. We also identified 59 cross-reactive antigens that are equally reactive among all groups, including healthy controls from the USA. Using these results we were able to devise a test that can classify melioidosis positive and negative individuals with sensitivity and specificity of 95% and 83%, respectively, a significant improvement over currently available diagnostic assays. Half of the reactive antigens contained a predicted signal peptide sequence and were classified as outer membrane, surface structures or secreted molecules, and an additional 20% were associated with pathogenicity, adaptation or chaperones. These results show that microarrays allow a more comprehensive analysis of the immune response on an antigen-specific, patient-specific, and population-specific basis, can identify serodiagnostic antigens, and contribute to a more detailed understanding of immunogenicity to this pathogen.
Understanding the way in which the immune system responds to infection is central to the development of vaccines and many diagnostics. To provide insight into this area, we fabricated a protein microarray containing 1,205 Burkholderia pseudomallei proteins, probed it with 88 melioidosis patient sera, and identified 170 reactive antigens. This subset of antigens was printed on a smaller array and probed with a collection of 747 individual sera derived from 10 patient groups including melioidosis patients from Northeast Thailand and Singapore, patients with different infections, healthy individuals from the USA, and from endemic and nonendemic regions of Thailand. We identified 49 antigens that are significantly more reactive in melioidosis patients than healthy people and patients with other types of bacterial infections. We also identified 59 cross-reactive antigens that are equally reactive among all groups, including healthy controls from the USA. Using these results we were able to devise a test that can classify melioidosis positive and negative individuals with sensitivity and specificity of 95% and 83%, respectively, a significant improvement over currently available diagnostic assays. Half of the reactive antigens contained a predicted signal peptide sequence and were classified as outer membrane, surface structures or secreted molecules, and an additional 20% were associated with pathogenicity, adaptation or chaperones. These results show that microarrays allow a more comprehensive analysis of the immune response on an antigen-specific, patient-specific, and population-specific basis, can identify serodiagnostic antigens, and contribute to a more detailed understanding of immunogenicity to this pathogen. [PUBLICATION ABSTRACT]
Understanding the way in which the immune system responds to infection is central to the development of vaccines and many diagnostics. To provide insight into this area, we fabricated a protein microarray containing 1,205 Burkholderia pseudomallei proteins, probed it with 88 melioidosis patient sera, and identified 170 reactive antigens. This subset of antigens was printed on a smaller array and probed with a collection of 747 individual sera derived from 10 patient groups including melioidosis patients from Northeast Thailand and Singapore, patients with different infections, healthy individuals from the USA, and from endemic and nonendemic regions of Thailand. We identified 49 antigens that are significantly more reactive in melioidosis patients than healthy people and patients with other types of bacterial infections. We also identified 59 cross-reactive antigens that are equally reactive among all groups, including healthy controls from the USA. Using these results we were able to devise a test that can classify melioidosis positive and negative individuals with sensitivity and specificity of 95% and 83%, respectively, a significant improvement over currently available diagnostic assays. Half of the reactive antigens contained a predicted signal peptide sequence and were classified as outer membrane, surface structures or secreted molecules, and an additional 20% were associated with pathogenicity, adaptation or chaperones. These results show that microarrays allow a more comprehensive analysis of the immune response on an antigen-specific, patient-specific, and population-specific basis, can identify serodiagnostic antigens, and contribute to a more detailed understanding of immunogenicity to this pathogen.
Understanding the way in which the immune system responds to infection is central to the development of vaccines and many diagnostics. To provide insight into this area, we fabricated a protein microarray containing 1,205 Burkholderia pseudomallei proteins, probed it with 88 melioidosis patient sera, and identified 170 reactive antigens. This subset of antigens was printed on a smaller array and probed with a collection of 747 individual sera derived from 10 patient groups including melioidosis patients from Northeast Thailand and Singapore, patients with different infections, healthy individuals from the USA, and from endemic and nonendemic regions of Thailand. We identified 49 antigens that are significantly more reactive in melioidosis patients than healthy people and patients with other types of bacterial infections. We also identified 59 cross-reactive antigens that are equally reactive among all groups, including healthy controls from the USA. Using these results we were able to devise a test that can classify melioidosis positive and negative individuals with sensitivity and specificity of 95% and 83%, respectively, a significant improvement over currently available diagnostic assays. Half of the reactive antigens contained a predicted signal peptide sequence and were classified as outer membrane, surface structures or secreted molecules, and an additional 20% were associated with pathogenicity, adaptation or chaperones. These results show that microarrays allow a more comprehensive analysis of the immune response on an antigen-specific, patient-specific, and population-specific basis, can identify sérodiagnostic antigens, and contribute to a more detailed understanding of immunogenicity to this pathogen.
Author Peacock, Sharon
Burk, Chad
Pablo, Jozelyn
Titball, Richard W
Felgner, Philip L
Lertmemongkolchai, Ganjana
Chew, Janet S.W
Chantratita, Narisara
Molina, Douglas M
Kayala, Matthew A
Duffield, Melanie
Wang, Dongling
Davies, D. Huw
Vigil, Adam
Yang, Ron
Baldi, Pierre
Hirst, Siddiqua
Nakajima-Sasaki, Rie
Neel, Julien
Tan, Gladys
Bancroft, Greg
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Edited by Peter Palese, Mount Sinai School of Medicine, New York, NY, and approved June 19, 2009
Author contributions: P.L.F., A.V., G.T., G.B., G.L., D.H.D., P.B., S.P., and R.W.T. designed research; M.A.K., A.V., R.N.-S., J.P., D.M.M., S.H., J.S.W.C., D.W., and N.C. performed research; P.L.F., M.A.K., A.V., C.B., G.T., M.D., R.Y., J.N., G.L., D.H.D., P.B., S.P., and R.W.T. analyzed data; and P.L.F., A.V., P.B., S.P., and R.W.T. wrote the paper.
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Snippet Understanding the way in which the immune system responds to infection is central to the development of vaccines and many diagnostics. To provide insight into...
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SubjectTerms Antibodies
Antigens
Antigens, Bacterial - classification
Antigens, Bacterial - immunology
Bacteria
Bacterial proteins
Bacterial Proteins - immunology
Biological Sciences
Burkholderia pseudomallei
Burkholderia pseudomallei - immunology
Case-Control Studies
Cross Reactions - immunology
Diagnostic tests
Epitope Mapping
Humans
Immune system
Infections
Melioidosis
Melioidosis - diagnosis
Melioidosis - immunology
Molecules
Protein Array Analysis
Proteomes
Reactivity
Serologic Tests
Singapore
Thailand
Tropical medicine
United States
Vaccination
Title Burkholderia pseudomallei protein microarray reveals serodiagnostic and cross-reactive antigens
URI https://www.jstor.org/stable/40485395
http://www.pnas.org/content/106/32/13499.abstract
https://www.ncbi.nlm.nih.gov/pubmed/19666533
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