Investigation of a Legionnaires’ Disease Outbreak in Yamagata City, Japan, 2019, Using Direct Sequence-Based Typing

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Published inJapanese Journal of Infectious Diseases Vol. 74; no. 5; pp. 491 - 494
Main Authors Seto, Junji, Amemura-Maekawa, Junko, Sampei, Mika, Araki, Kyoko, Endo, Misao, Kura, Fumiaki, Ikeda, Tatsuya, Kato, Takeo, Ohnishi, Makoto, Mizuta, Katsumi
Format Journal Article
LanguageEnglish
Published Tokyo National Institute of Infectious Diseases, Japanese Journal of Infectious Diseases Editorial Committee 30.09.2021
Japan Science and Technology Agency
Subjects
Legionella pneumophila
Legionnaire's disease
pulsed-field gel electrophoresis
respiratory specimen
SBT
sequence-based typing
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ArticleNumber JJID.2020.815
Author Araki, Kyoko
Kato, Takeo
Endo, Misao
Ohnishi, Makoto
Kura, Fumiaki
Ikeda, Tatsuya
Amemura-Maekawa, Junko
Seto, Junji
Sampei, Mika
Mizuta, Katsumi
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  fullname: Amemura-Maekawa, Junko
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  fullname: Sampei, Mika
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  fullname: Ohnishi, Makoto
  organization: Department of Bacteriology I, National Institute of Infectious Diseases, Japan
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  fullname: Mizuta, Katsumi
  organization: Department of Microbiology, Yamagata Prefectural Institute of Public Health, Japan
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10.1099/jmm.0.000257
10.1128/AEM.00721-18
10.1128/JCM.00261-07
10.1128/JCM.43.5.2047-2052.2005
10.1007/s10096-011-1535-0
10.1016/S0140-6736(15)60078-2
10.11150/kansenshogakuzasshi1970.67.1062
10.7883/yoken.JJID.2009.54
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References 3. Chang B, Amemura-Maekawa J, Watanabe H. An improved protocol for the preparation and restriction enzyme digestion of pulsed-field gel electrophoresis agarose plugs for the analysis of Legionella isolates. Jpn J Infect Dis. 2009;62:54-6.
1. Cunha BA, Burillo A, Bouza E. Legionnaires' disease. Lancet. 2016;387:376-85.
4. Gaia V, Fry NK, Afshar B, et al. Consensus sequence-based scheme for epidemiological typing of clinical and environmental isolates of Legionella pneumophila. J Clin Microbiol. 2005;43:2047-52.
8. Koide M, Saito A, Higa F, et al. Study of Legionella pneumophila detection by two step polymerase chain reaction. Kansenshogaku Zasshi. 1993;67:1062-7. Japanese.
5. Ratzow S, Gaia V, Helbig JH, et al. Addition of neuA, the gene encoding N-acylneuraminate cytidylyl transferase, increases the discriminatory ability of the consensus sequence-based scheme for typing Legionella pneumophila serogroup 1 strains. J Clin Microbiol. 2007;45:1965-8.
9. Mahbubani MH, Bej AK, Miller R, et al. Detection of Legionella with polymerase chain reaction and gene probe methods. Mol Cell Probes. 1990;4:175-87.
2. Amemura-Maekawa J, Kura F, Chida K, et al. Legionella pneumophila and other Legionella species isolated from legionellosis patients in Japan between 2008 and 2016. Appl Environ Microbiol. 2018;84:e00721-18.
10. Mentasti M, Afshar B, Collins S, et al. Rapid investigation of cases and clusters of Legionnaires' disease in England and Wales using direct molecular typing. J Med Microbiol. 2016;65:484-93.
6. National Institute of Infectious Diseases. Laboratory manuals for pathogen detection, legionellosis. Available at <https://www.niid.go.jp/niid/images/lab-manual/Legionella20200904.pdf>. Accessed December 10, 2020. Japanese.
11. Annaka T. Rapid and simple detection of Legionella species by LAMP, a new DNA amplification method. Rinsho Biseibutshu Jinsoku Shindan Kenkyukai Shi. 2003;14:25-30. Japanese.
7. Mentasti M, Fry NK, Afshar B, et al. Application of Legionella pneumophila-specific quantitative real-time PCR combined with direct amplification and sequence-based typing in the diagnosis and epidemiological investigation of Legionnaires' disease. Eur J Clin Microbiol. 2012;31:2017-28.
11
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References_xml – reference: 3. Chang B, Amemura-Maekawa J, Watanabe H. An improved protocol for the preparation and restriction enzyme digestion of pulsed-field gel electrophoresis agarose plugs for the analysis of Legionella isolates. Jpn J Infect Dis. 2009;62:54-6.
– reference: 8. Koide M, Saito A, Higa F, et al. Study of Legionella pneumophila detection by two step polymerase chain reaction. Kansenshogaku Zasshi. 1993;67:1062-7. Japanese.
– reference: 9. Mahbubani MH, Bej AK, Miller R, et al. Detection of Legionella with polymerase chain reaction and gene probe methods. Mol Cell Probes. 1990;4:175-87.
– reference: 4. Gaia V, Fry NK, Afshar B, et al. Consensus sequence-based scheme for epidemiological typing of clinical and environmental isolates of Legionella pneumophila. J Clin Microbiol. 2005;43:2047-52.
– reference: 6. National Institute of Infectious Diseases. Laboratory manuals for pathogen detection, legionellosis. Available at <https://www.niid.go.jp/niid/images/lab-manual/Legionella20200904.pdf>. Accessed December 10, 2020. Japanese.
– reference: 10. Mentasti M, Afshar B, Collins S, et al. Rapid investigation of cases and clusters of Legionnaires' disease in England and Wales using direct molecular typing. J Med Microbiol. 2016;65:484-93.
– reference: 2. Amemura-Maekawa J, Kura F, Chida K, et al. Legionella pneumophila and other Legionella species isolated from legionellosis patients in Japan between 2008 and 2016. Appl Environ Microbiol. 2018;84:e00721-18.
– reference: 7. Mentasti M, Fry NK, Afshar B, et al. Application of Legionella pneumophila-specific quantitative real-time PCR combined with direct amplification and sequence-based typing in the diagnosis and epidemiological investigation of Legionnaires' disease. Eur J Clin Microbiol. 2012;31:2017-28.
– reference: 11. Annaka T. Rapid and simple detection of Legionella species by LAMP, a new DNA amplification method. Rinsho Biseibutshu Jinsoku Shindan Kenkyukai Shi. 2003;14:25-30. Japanese.
– reference: 5. Ratzow S, Gaia V, Helbig JH, et al. Addition of neuA, the gene encoding N-acylneuraminate cytidylyl transferase, increases the discriminatory ability of the consensus sequence-based scheme for typing Legionella pneumophila serogroup 1 strains. J Clin Microbiol. 2007;45:1965-8.
– reference: 1. Cunha BA, Burillo A, Bouza E. Legionnaires' disease. Lancet. 2016;387:376-85.
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SubjectTerms Legionella pneumophila
Legionnaire's disease
pulsed-field gel electrophoresis
respiratory specimen
SBT
sequence-based typing
Title Investigation of a Legionnaires’ Disease Outbreak in Yamagata City, Japan, 2019, Using Direct Sequence-Based Typing
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