sRNAdeep: a novel tool for bacterial sRNA prediction based on DistilBERT encoding mode and deep learning algorithms - Qian, Weiye; Sun, Jiawei; Liu, Tianyi; Yang, Zhiyuan; Tsui, Stephen Kwok-Wing (BMC genomics, 2024)
Keywords: Accuracy; Algorithms; Analysis; Anopheles; Bacteria; Bacterial genetics; Bacterial sRNA; Care and treatment; Computational Biology - methods; Computational linguistics; Data mining; Datasets; Deep Learning; Drug metabolism; Drug resistance; E coli; Experimental methods; Gene expression; Genes; Genome analysis; Genome, Bacterial; Genomics; Health aspects; Language processing; Machine learning; Methods; Mycobacterium tuberculosis; Mycobacterium tuberculosis - genetics; Natural language interfaces; Performance evaluation; Physiological aspects; Prediction models; Prevention; Proteins; RNA; RNA, Bacterial - genetics; RNA, Small Untranslated - genetics; Software; Sparsity; Support vector machines; Therapeutic targets; China; Deep learning; Genome analysis; Mycobacterium tuberculosis; Bacterial sRNA