Connection subdomain mutations in HIV-1 subtype-C treatment-experienced patients enhance NRTI and NNRTI drug resistance

Abstract Mutations in the connection subdomain (CN) and RNase H domain (RH) of HIV-1 reverse transcriptase (RT) from subtype B-infected patients enhance nucleoside and nonnucleoside RT inhibitor (NRTI and NNRTI) resistance by affecting the balance between polymerization and RNase H activity. To dete...

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Published inVirology (New York, N.Y.) Vol. 435; no. 2; pp. 433 - 441
Main Authors Delviks-Frankenberry, Krista A, Lengruber, Renan B, Santos, Andre F, Silveira, Jussara M, Soares, Marcelo A, Kearney, Mary F, Maldarelli, Frank, Pathak, Vinay K
Format Journal Article
LanguageEnglish
Published United States Elsevier Inc 20.01.2013
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Abstract Abstract Mutations in the connection subdomain (CN) and RNase H domain (RH) of HIV-1 reverse transcriptase (RT) from subtype B-infected patients enhance nucleoside and nonnucleoside RT inhibitor (NRTI and NNRTI) resistance by affecting the balance between polymerization and RNase H activity. To determine whether CN mutations in subtype C influence drug sensitivity, single genome sequencing was performed on Brazilian subtype C-infected patients failing RTI therapy. CN mutations identified were similar to subtype B, including A376S, A400T, Q334D, G335D, N348I, and A371V, and increased AZT resistance in the presence of thymidine analog mutations. CN mutations also enhanced NNRTI resistance in the presence of classical NNRTI mutations: etravirine resistance was enhanced 6- to 11-fold in the presence of L100I/K103N/Y181C. These results indicate that selection of CN mutations in treatment-experienced patients also occurs in subtype-C-infected patients and are likely to provide valuable information in predicting clinical RTI resistance.
AbstractList Abstract Mutations in the connection subdomain (CN) and RNase H domain (RH) of HIV-1 reverse transcriptase (RT) from subtype B-infected patients enhance nucleoside and nonnucleoside RT inhibitor (NRTI and NNRTI) resistance by affecting the balance between polymerization and RNase H activity. To determine whether CN mutations in subtype C influence drug sensitivity, single genome sequencing was performed on Brazilian subtype C-infected patients failing RTI therapy. CN mutations identified were similar to subtype B, including A376S, A400T, Q334D, G335D, N348I, and A371V, and increased AZT resistance in the presence of thymidine analog mutations. CN mutations also enhanced NNRTI resistance in the presence of classical NNRTI mutations: etravirine resistance was enhanced 6- to 11-fold in the presence of L100I/K103N/Y181C. These results indicate that selection of CN mutations in treatment-experienced patients also occurs in subtype-C-infected patients and are likely to provide valuable information in predicting clinical RTI resistance.
Mutations in the connection subdomain (CN) and RNase H domain (RH) of HIV-1 reverse transcriptase (RT) from subtype B-infected patients enhance nucleoside and nonnucleoside RT inhibitor (NRTI and NNRTI) resistance by affecting the balance between polymerization and RNase H activity. To determine whether CN mutations in subtype C influence drug sensitivity, single genome sequencing was performed on Brazilian subtype C-infected patients failing RTI therapy. CN mutations identified were similar to subtype B, including A376S, A400T, Q334D, G335D, N348I, and A371V, and increased AZT resistance in the presence of thymidine analog mutations. CN mutations also enhanced NNRTI resistance in the presence of classical NNRTI mutations: etravirine resistance was enhanced 6- to 11-fold in the presence of L100I/K103N/Y181C. These results indicate that selection of CN mutations in treatment-experienced patients also occurs in subtype-C-infected patients and are likely to provide valuable information in predicting clinical RTI resistance.
Author Soares, Marcelo A
Kearney, Mary F
Maldarelli, Frank
Pathak, Vinay K
Silveira, Jussara M
Lengruber, Renan B
Delviks-Frankenberry, Krista A
Santos, Andre F
AuthorAffiliation d Laboratório de Virologia Humana, Department of Genetics, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil
f Programa de Genética, Instituto Nacional de Câncer, Rio de Janeiro, Brazil
e Faculty of Medicine, Universidade Federal de Rio Grande, Rio Grande, RS, Brazil
a Viral Mutation Section, HIV Drug Resistance Program, Frederick National Laboratory for Cancer Research, Frederick, Maryland, 21702, USA
b Virology Core Facility, HIV Drug Resistance Program, Frederick National Laboratory for Cancer Research, Frederick, Maryland, 21702, USA
c Host-Virus Interaction Branch, HIV Drug Resistance Program, Frederick National Laboratory for Cancer Research, Frederick, Maryland, 21702, USA
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Snippet Abstract Mutations in the connection subdomain (CN) and RNase H domain (RH) of HIV-1 reverse transcriptase (RT) from subtype B-infected patients enhance...
Mutations in the connection subdomain (CN) and RNase H domain (RH) of HIV-1 reverse transcriptase (RT) from subtype B-infected patients enhance nucleoside and...
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StartPage 433
SubjectTerms Amino Acid Sequence
Anti-HIV Agents - pharmacology
Brazil
Cell Line
Connection domain
Drug resistance
Drug Resistance, Viral - genetics
Genomes
HIV Infections - drug therapy
HIV Infections - virology
HIV Reverse Transcriptase - chemistry
HIV Reverse Transcriptase - genetics
HIV-1 - drug effects
HIV-1 - genetics
Human immunodeficiency virus 1
Humans
Infectious Disease
Molecular Sequence Data
Mutation
Nitriles
NNRTI
NRTI
nucleosides
Polymerization
Protein Structure, Tertiary - genetics
Pyridazines - pharmacology
Pyrimidines
Reverse Transcriptase Inhibitors - pharmacology
Ribonuclease H
ribonuclease Rh
RNA-directed DNA polymerase
Subtype C
Thymidine
Zidovudine
Zidovudine - pharmacology
Title Connection subdomain mutations in HIV-1 subtype-C treatment-experienced patients enhance NRTI and NNRTI drug resistance
URI https://www.clinicalkey.es/playcontent/1-s2.0-S004268221200462X
https://dx.doi.org/10.1016/j.virol.2012.09.021
https://www.ncbi.nlm.nih.gov/pubmed/23068886
https://search.proquest.com/docview/1272731250
https://pubmed.ncbi.nlm.nih.gov/PMC3534945
Volume 435
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