The Response of Triple-Negative Breast Cancer to Neoadjuvant Chemotherapy and the Epithelial-Mesenchymal Transition

It would be highly desirable to find prognostic and predictive markers for triple-negative breast cancer (TNBC), a strongly heterogeneous and invasive breast cancer subtype often characterized by a high recurrence rate and a poor outcome. Here, we investigated the prognostic and predictive capabilit...

Full description

Saved in:
Bibliographic Details
Published inInternational journal of molecular sciences Vol. 24; no. 7; p. 6422
Main Authors Zapperi, Stefano, La Porta, Caterina A M
Format Journal Article
LanguageEnglish
Published Switzerland MDPI AG 29.03.2023
MDPI
Subjects
Online AccessGet full text

Cover

Loading…
Abstract It would be highly desirable to find prognostic and predictive markers for triple-negative breast cancer (TNBC), a strongly heterogeneous and invasive breast cancer subtype often characterized by a high recurrence rate and a poor outcome. Here, we investigated the prognostic and predictive capabilities of ARIADNE, a recently developed transcriptomic test focusing on the epithelial-mesenchymal transition. We first compared the stratification of TNBC patients obtained by ARIADNE with that based on other common pathological indicators, such as grade, stage and nodal status, and found that ARIADNE was more effective than the other methods in dividing patients into groups with different disease-free survival statistics. Next, we considered the response to neoadjuvant chemotherapy and found that the classification provided by ARIADNE led to statistically significant differences in the rates of pathological complete response within the groups.
AbstractList It would be highly desirable to find prognostic and predictive markers for triple-negative breast cancer (TNBC), a strongly heterogeneous and invasive breast cancer subtype often characterized by a high recurrence rate and a poor outcome. Here, we investigated the prognostic and predictive capabilities of ARIADNE, a recently developed transcriptomic test focusing on the epithelial-mesenchymal transition. We first compared the stratification of TNBC patients obtained by ARIADNE with that based on other common pathological indicators, such as grade, stage and nodal status, and found that ARIADNE was more effective than the other methods in dividing patients into groups with different disease-free survival statistics. Next, we considered the response to neoadjuvant chemotherapy and found that the classification provided by ARIADNE led to statistically significant differences in the rates of pathological complete response within the groups.
Audience Academic
Author Zapperi, Stefano
La Porta, Caterina A M
AuthorAffiliation 2 CNR—Consiglio Nazionale delle Ricerche, Istituto di Chimica della Materia Condensata e di Tecnologie per l’Energia, Via R. Cozzi 53, 20125 Milano, Italy
3 Center for Complexity and Biosystems, Department of Environmental Science and Policy, University of Milan, Via Celoria 10, 20133 Milano, Italy
4 CNR—Consiglio Nazionale delle Ricerche, Istituto di Biofisica, Via Celoria 10, 20133 Milano, Italy
1 Center for Complexity and Biosystems, Department of Physics, University of Milan, Via Celoria 16, 20133 Milano, Italy
AuthorAffiliation_xml – name: 1 Center for Complexity and Biosystems, Department of Physics, University of Milan, Via Celoria 16, 20133 Milano, Italy
– name: 2 CNR—Consiglio Nazionale delle Ricerche, Istituto di Chimica della Materia Condensata e di Tecnologie per l’Energia, Via R. Cozzi 53, 20125 Milano, Italy
– name: 3 Center for Complexity and Biosystems, Department of Environmental Science and Policy, University of Milan, Via Celoria 10, 20133 Milano, Italy
– name: 4 CNR—Consiglio Nazionale delle Ricerche, Istituto di Biofisica, Via Celoria 10, 20133 Milano, Italy
Author_xml – sequence: 1
  givenname: Stefano
  orcidid: 0000-0001-5692-5465
  surname: Zapperi
  fullname: Zapperi, Stefano
  organization: CNR-Consiglio Nazionale delle Ricerche, Istituto di Chimica della Materia Condensata e di Tecnologie per l'Energia, Via R. Cozzi 53, 20125 Milano, Italy
– sequence: 2
  givenname: Caterina A M
  orcidid: 0000-0002-3010-8966
  surname: La Porta
  fullname: La Porta, Caterina A M
  organization: CNR-Consiglio Nazionale delle Ricerche, Istituto di Biofisica, Via Celoria 10, 20133 Milano, Italy
BackLink https://www.ncbi.nlm.nih.gov/pubmed/37047393$$D View this record in MEDLINE/PubMed
BookMark eNptkstvEzEQxleoiD7gxhmtxIUDW7x-rNcn1EZtqVSKhMLZ8mM2cbRrL_YmUv57HFJKgpAPMxp_8xvN6DsvTnzwUBRva3RJiECf3GpImCLeUIxfFGd1DhVCDT85yE-L85RWCGGCmXhVnBKOKCeCnBVpvoTyO6Qx-ARl6Mp5dGMP1SMs1OQ2UF5HUGkqZ8obiOUUykcIyq7WG-VzdQlDmJYQ1bgtlbdlzsub0eXQO9VXXyGBN8vtoPoMVj65yQX_unjZqT7Bm6d4Ufy4vZnPvlQP3-7uZ1cPlWG0mSraMWWxUVzgmoNBVgNYzTW3hrega4YYxi3CvMGGU24VajGzpBMNMgRbTS6K-z3XBrWSY3SDilsZlJO_CyEupIqTMz1IAhpxrfLcPJs2QmgtwLRM00a3HIvM-rxnjWs9gDXgp6j6I-jxj3dLuQgbWSMkKKM7wocnQgw_15AmObhkoO-Vh7BOMq-CGlwztpO-_0e6Cuvo860k5kLwumG4_ataqLyB813Ig80OKq84qwXmlLCsuvyPKj8LgzPZSp3L9aOGj_sGE0NKEbrnJWskd46Th47L8neHh3kW_7EY-QUhRdMz
CitedBy_id crossref_primary_10_3390_cancers16040692
Cites_doi 10.1016/j.ccell.2019.02.001
10.1371/journal.pone.0126522
10.1016/j.gdata.2014.09.014
10.1371/journal.pone.0157368
10.1172/JCI96313
10.1016/j.ceb.2005.08.001
10.1038/s41598-022-13428-2
10.1200/JCO.2005.04.7985
10.1093/jnci/djj329
10.1158/1078-0432.CCR-06-1109
10.1016/j.breast.2022.08.012
10.1016/j.humpath.2013.07.014
10.1038/415530a
10.1158/1078-0432.CCR-14-0432
10.1016/j.cell.2011.11.025
10.1016/j.gde.2009.04.007
10.1158/1538-7445.SABCS18-PD5-01
10.3747/co.25.3954
10.1038/s41523-023-00508-3
10.1038/s41586-018-0040-3
10.1046/j.1440-1827.1999.00964.x
10.1172/JCI45014
10.3389/fphys.2020.511071
10.1097/00000478-199004000-00002
10.1007/s10549-014-2927-5
10.1093/annonc/mdy024
10.1016/j.cels.2021.04.007
10.1371/journal.pone.0017795
10.1186/1471-2407-7-203
10.1093/annonc/mdn039
10.1073/pnas.1722609115
10.1056/NEJMoa041588
10.3892/ijo.2020.5135
10.1158/0008-5472.CAN-07-2017
10.1093/bioinformatics/bth469
10.3390/ijms24032969
10.1158/2159-8290.CD-18-1177
10.3389/fbioe.2020.00220
10.1126/science.1228522
10.18632/oncotarget.25413
10.1038/nrclinonc.2016.66
10.1007/s10549-010-1103-9
10.1001/jama.2011.593
10.1200/JCO.2011.38.8595
10.1200/JCO.2017.35.15_suppl.556
10.18632/oncotarget.8166
10.12688/f1000research.18888.1
10.1016/j.isci.2022.105799
10.1016/j.xcrm.2022.100851
10.1158/0008-5472.CAN-16-3521
ContentType Journal Article
Copyright COPYRIGHT 2023 MDPI AG
2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
2023 by the authors. 2023
Copyright_xml – notice: COPYRIGHT 2023 MDPI AG
– notice: 2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
– notice: 2023 by the authors. 2023
DBID CGR
CUY
CVF
ECM
EIF
NPM
AAYXX
CITATION
3V.
7X7
7XB
88E
8FI
8FJ
8FK
8G5
ABUWG
AFKRA
AZQEC
BENPR
CCPQU
DWQXO
FYUFA
GHDGH
GNUQQ
GUQSH
K9.
M0S
M1P
M2O
MBDVC
PIMPY
PQEST
PQQKQ
PQUKI
PRINS
Q9U
7X8
5PM
DOA
DOI 10.3390/ijms24076422
DatabaseName Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
CrossRef
ProQuest Central (Corporate)
ProQuest_Health & Medical Collection
ProQuest Central (purchase pre-March 2016)
Medical Database (Alumni Edition)
Hospital Premium Collection
Hospital Premium Collection (Alumni Edition)
ProQuest Central (Alumni) (purchase pre-March 2016)
Research Library (Alumni Edition)
ProQuest Central (Alumni)
ProQuest Central UK/Ireland
ProQuest Central Essentials
AUTh Library subscriptions: ProQuest Central
ProQuest One Community College
ProQuest Central
Health Research Premium Collection
Health Research Premium Collection (Alumni)
ProQuest Central Student
Research Library Prep
ProQuest Health & Medical Complete (Alumni)
Health & Medical Collection (Alumni Edition)
PML(ProQuest Medical Library)
ProQuest Research Library
Research Library (Corporate)
Publicly Available Content Database
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Academic
ProQuest One Academic UKI Edition
ProQuest Central China
ProQuest Central Basic
MEDLINE - Academic
PubMed Central (Full Participant titles)
DOAJ: Directory of Open Access Journals
DatabaseTitle MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
CrossRef
Publicly Available Content Database
Research Library Prep
ProQuest Central Student
ProQuest Central Essentials
ProQuest Health & Medical Complete (Alumni)
ProQuest Central (Alumni Edition)
ProQuest One Community College
Research Library (Alumni Edition)
ProQuest Central China
ProQuest Central
Health Research Premium Collection
Health and Medicine Complete (Alumni Edition)
ProQuest Central Korea
ProQuest Research Library
ProQuest Medical Library (Alumni)
ProQuest Central Basic
ProQuest One Academic Eastern Edition
ProQuest Hospital Collection
Health Research Premium Collection (Alumni)
ProQuest Hospital Collection (Alumni)
ProQuest Health & Medical Complete
ProQuest Medical Library
ProQuest One Academic UKI Edition
ProQuest One Academic
ProQuest Central (Alumni)
MEDLINE - Academic
DatabaseTitleList

MEDLINE

Publicly Available Content Database
CrossRef
Database_xml – sequence: 1
  dbid: DOA
  name: DOAJ: Directory of Open Access Journals
  url: https://www.doaj.org/
  sourceTypes: Open Website
– sequence: 2
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 3
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
– sequence: 4
  dbid: BENPR
  name: AUTh Library subscriptions: ProQuest Central
  url: https://www.proquest.com/central
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 1422-0067
ExternalDocumentID oai_doaj_org_article_3eb07ba546c544699bb9ec85b46b8729
A751927435
10_3390_ijms24076422
37047393
Genre Journal Article
GroupedDBID ---
29J
2WC
3V.
53G
5GY
5VS
7X7
88E
8FE
8FG
8FH
8FI
8FJ
8G5
A8Z
AADQD
AAFWJ
AAHBH
ABDBF
ABJCF
ABUWG
ACGFO
ACIHN
ACIWK
ACPRK
ADBBV
AEAQA
AENEX
AFKRA
AFPKN
AFZYC
ALIPV
ALMA_UNASSIGNED_HOLDINGS
AOIJS
AZQEC
BAWUL
BBNVY
BCNDV
BENPR
BHPHI
BPHCQ
BVXVI
CCPQU
CGR
CS3
CUY
CVF
D1I
DIK
DU5
DWQXO
E3Z
EBD
EBS
ECM
EIF
EJD
ESTFP
ESX
F5P
FRP
FYUFA
GNUQQ
GROUPED_DOAJ
GUQSH
GX1
HCIFZ
HH5
HMCUK
HYE
IAO
ITC
KB.
KQ8
LK8
M1P
M2O
M48
M7P
MODMG
M~E
NPM
O5R
O5S
OK1
P2P
PDBOC
PIMPY
PQQKQ
PROAC
PSQYO
RIG
RNS
RPM
TR2
TUS
UKHRP
~8M
AAYXX
CITATION
BGLVJ
7XB
8FK
K9.
MBDVC
PQEST
PQUKI
PRINS
Q9U
7X8
5PM
ID FETCH-LOGICAL-c546t-4f5ad2ca79217ec0dbeedb7b7dc78eb150522802762c747da0825d3f960c32db3
IEDL.DBID RPM
ISSN 1422-0067
1661-6596
IngestDate Fri Jul 05 11:57:07 EDT 2024
Tue Sep 17 21:32:58 EDT 2024
Sat Oct 05 04:29:24 EDT 2024
Fri Sep 13 03:42:46 EDT 2024
Thu Feb 22 23:34:58 EST 2024
Fri Feb 02 04:18:08 EST 2024
Fri Aug 23 01:59:05 EDT 2024
Sat Sep 28 08:12:33 EDT 2024
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 7
Keywords drug response
epithelial–mesenchymal transition
triple-negative breast cancer
Language English
License Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c546t-4f5ad2ca79217ec0dbeedb7b7dc78eb150522802762c747da0825d3f960c32db3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ORCID 0000-0002-3010-8966
0000-0001-5692-5465
OpenAccessLink https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10094549/
PMID 37047393
PQID 2799716528
PQPubID 2032341
ParticipantIDs doaj_primary_oai_doaj_org_article_3eb07ba546c544699bb9ec85b46b8729
pubmedcentral_primary_oai_pubmedcentral_nih_gov_10094549
proquest_miscellaneous_2800621559
proquest_journals_2799716528
gale_infotracmisc_A751927435
gale_infotracacademiconefile_A751927435
crossref_primary_10_3390_ijms24076422
pubmed_primary_37047393
PublicationCentury 2000
PublicationDate 20230329
PublicationDateYYYYMMDD 2023-03-29
PublicationDate_xml – month: 3
  year: 2023
  text: 20230329
  day: 29
PublicationDecade 2020
PublicationPlace Switzerland
PublicationPlace_xml – name: Switzerland
– name: Basel
PublicationTitle International journal of molecular sciences
PublicationTitleAlternate Int J Mol Sci
PublicationYear 2023
Publisher MDPI AG
MDPI
Publisher_xml – name: MDPI AG
– name: MDPI
References Petrosyan (ref_20) 2023; 26
Lin (ref_5) 2019; 9
Lehmann (ref_28) 2011; 121
Carey (ref_11) 2007; 13
Bianchini (ref_4) 2016; 13
Paik (ref_21) 2004; 351
ref_12
ref_19
Kela (ref_25) 2005; 21
Haraguchi (ref_39) 1999; 49
Schmid (ref_16) 2017; 35
Aleskandarany (ref_36) 2014; 145
Huober (ref_13) 2010; 124
Huber (ref_33) 2005; 17
Buyse (ref_24) 2006; 98
George (ref_44) 2017; 77
Hardisson (ref_35) 2008; 68
Lebert (ref_8) 2018; 25
Santonja (ref_52) 2018; 9
Won (ref_6) 2020; 57
Jiang (ref_3) 2019; 35
Chakraborty (ref_46) 2020; 8
ref_26
Zapperi (ref_48) 2022; 12
Bareche (ref_2) 2018; 29
Pastushenko (ref_45) 2018; 556
Paik (ref_22) 2006; 24
Bidard (ref_10) 2008; 19
Vidra (ref_15) 2022; 23
Zapperi (ref_32) 2021; 12
Jolly (ref_43) 2016; 7
Untch (ref_9) 2012; 30
Morris (ref_1) 2007; 110
ref_31
Rhim (ref_34) 2012; 148
Bitterman (ref_38) 1990; 14
Hatzis (ref_51) 2011; 305
Castrellon (ref_14) 2017; 11
ref_37
Debien (ref_18) 2023; 9
Schmid (ref_17) 2019; 79
Zapperi (ref_27) 2022; 3
Burstein (ref_29) 2015; 21
Karn (ref_53) 2014; 2
Yu (ref_42) 2013; 339
Dai (ref_23) 2002; 415
Jia (ref_50) 2022; 66
ref_7
Jour (ref_40) 2013; 44
Revenu (ref_41) 2009; 19
Zapperi (ref_47) 2018; 115
Yu (ref_30) 2020; 11
Gruosso (ref_49) 2019; 129
References_xml – volume: 35
  start-page: 428
  year: 2019
  ident: ref_3
  article-title: Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies
  publication-title: Cancer Cell
  doi: 10.1016/j.ccell.2019.02.001
  contributor:
    fullname: Jiang
– ident: ref_37
  doi: 10.1371/journal.pone.0126522
– volume: 2
  start-page: 354
  year: 2014
  ident: ref_53
  article-title: Control of dataset bias in combined Affymetrix cohorts of triple negative breast cancer
  publication-title: Genom. Data
  doi: 10.1016/j.gdata.2014.09.014
  contributor:
    fullname: Karn
– ident: ref_31
  doi: 10.1371/journal.pone.0157368
– volume: 129
  start-page: 1785
  year: 2019
  ident: ref_49
  article-title: Spatially distinct tumor immune microenvironments stratify triple-negative breast cancers
  publication-title: J. Clin. Investig.
  doi: 10.1172/JCI96313
  contributor:
    fullname: Gruosso
– volume: 17
  start-page: 548
  year: 2005
  ident: ref_33
  article-title: Molecular requirements for epithelial-mesenchymal transition during tumor progression
  publication-title: Curr. Opin. Cell Biol.
  doi: 10.1016/j.ceb.2005.08.001
  contributor:
    fullname: Huber
– volume: 12
  start-page: 9651
  year: 2022
  ident: ref_48
  article-title: Classification of triple negative breast cancer by epithelial mesenchymal transition and the tumor immune microenvironment
  publication-title: Sci. Rep.
  doi: 10.1038/s41598-022-13428-2
  contributor:
    fullname: Zapperi
– volume: 24
  start-page: 3726
  year: 2006
  ident: ref_22
  article-title: Gene expression and benefit of chemotherapy in women with node-negative, estrogen receptor-positive breast cancer
  publication-title: J. Clin. Oncol.
  doi: 10.1200/JCO.2005.04.7985
  contributor:
    fullname: Paik
– volume: 98
  start-page: 1183
  year: 2006
  ident: ref_24
  article-title: Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer
  publication-title: J. Natl. Cancer Inst.
  doi: 10.1093/jnci/djj329
  contributor:
    fullname: Buyse
– volume: 13
  start-page: 2329
  year: 2007
  ident: ref_11
  article-title: The triple negative paradox: Primary tumor chemosensitivity of breast cancer subtypes
  publication-title: Clin. Cancer Res.
  doi: 10.1158/1078-0432.CCR-06-1109
  contributor:
    fullname: Carey
– volume: 66
  start-page: 31
  year: 2022
  ident: ref_50
  article-title: A systematic review and meta-analysis of BRCA1/2 mutation for predicting the effect of platinum-based chemotherapy in triple-negative breast cancer
  publication-title: Breast
  doi: 10.1016/j.breast.2022.08.012
  contributor:
    fullname: Jia
– volume: 44
  start-page: 2853
  year: 2013
  ident: ref_40
  article-title: Primary cutaneous carcinosarcoma: Insights into its clonal origin and mutational pattern expression analysis through next-generation sequencing
  publication-title: Hum. Pathol.
  doi: 10.1016/j.humpath.2013.07.014
  contributor:
    fullname: Jour
– volume: 415
  start-page: 530
  year: 2002
  ident: ref_23
  article-title: Gene expression profiling predicts clinical outcome of breast cancer
  publication-title: Nature
  doi: 10.1038/415530a
  contributor:
    fullname: Dai
– volume: 21
  start-page: 1688
  year: 2015
  ident: ref_29
  article-title: Comprehensive genomic analysis identifies novel subtypes and targets of triple-negative breast cancer
  publication-title: Clin. Cancer Res.
  doi: 10.1158/1078-0432.CCR-14-0432
  contributor:
    fullname: Burstein
– volume: 148
  start-page: 349
  year: 2012
  ident: ref_34
  article-title: EMT and dissemination precede pancreatic tumor formation
  publication-title: Cell
  doi: 10.1016/j.cell.2011.11.025
  contributor:
    fullname: Rhim
– volume: 19
  start-page: 338
  year: 2009
  ident: ref_41
  article-title: EMT 2.0: Shaping epithelia through collective migration
  publication-title: Curr. Opin. Genet. Dev.
  doi: 10.1016/j.gde.2009.04.007
  contributor:
    fullname: Revenu
– volume: 79
  start-page: PD5-01
  year: 2019
  ident: ref_17
  article-title: Abstract PD5-01: KEYNOTE-173: Phase 1b multicohort study of pembrolizumab (Pembro) in combination with chemotherapy as neoadjuvant treatment for triple-negative breast cancer (TNBC)
  publication-title: Cancer Res.
  doi: 10.1158/1538-7445.SABCS18-PD5-01
  contributor:
    fullname: Schmid
– volume: 25
  start-page: S142
  year: 2018
  ident: ref_8
  article-title: Advances in the systemic treatment of triple-negative breast cancer
  publication-title: Curr. Oncol.
  doi: 10.3747/co.25.3954
  contributor:
    fullname: Lebert
– volume: 9
  start-page: 7
  year: 2023
  ident: ref_18
  article-title: Immunotherapy in breast cancer: An overview of current strategies and perspectives
  publication-title: NPJ Breast Cancer
  doi: 10.1038/s41523-023-00508-3
  contributor:
    fullname: Debien
– volume: 556
  start-page: 463
  year: 2018
  ident: ref_45
  article-title: Identification of the tumour transition states occurring during EMT
  publication-title: Nature
  doi: 10.1038/s41586-018-0040-3
  contributor:
    fullname: Pastushenko
– volume: 49
  start-page: 903
  year: 1999
  ident: ref_39
  article-title: Pulmonary carcinosarcoma: Immunohistochemical and ultrastructural studies
  publication-title: Pathol. Int.
  doi: 10.1046/j.1440-1827.1999.00964.x
  contributor:
    fullname: Haraguchi
– volume: 121
  start-page: 2750
  year: 2011
  ident: ref_28
  article-title: Identification of human triple-negative breast cancer subtypes and preclinical models for selection of targeted therapies
  publication-title: J. Clin. Investig.
  doi: 10.1172/JCI45014
  contributor:
    fullname: Lehmann
– volume: 11
  start-page: 511071
  year: 2020
  ident: ref_30
  article-title: Predicting Relapse in Patients With Triple Negative Breast Cancer (TNBC) Using a Deep-Learning Approach
  publication-title: Front. Physiol.
  doi: 10.3389/fphys.2020.511071
  contributor:
    fullname: Yu
– volume: 14
  start-page: 317
  year: 1990
  ident: ref_38
  article-title: The significance of epithelial differentiation in mixed mesodermal tumors of the uterus. A clinicopathologic and immunohistochemical study
  publication-title: Am. J. Surg. Pathol.
  doi: 10.1097/00000478-199004000-00002
  contributor:
    fullname: Bitterman
– volume: 145
  start-page: 339
  year: 2014
  ident: ref_36
  article-title: Epithelial mesenchymal transition in early invasive breast cancer: An immunohistochemical and reverse phase protein array study
  publication-title: Breast Cancer Res. Treat.
  doi: 10.1007/s10549-014-2927-5
  contributor:
    fullname: Aleskandarany
– volume: 29
  start-page: 895
  year: 2018
  ident: ref_2
  article-title: Unravelling triple-negative breast cancer molecular heterogeneity using an integrative multiomic analysis
  publication-title: Ann. Oncol.
  doi: 10.1093/annonc/mdy024
  contributor:
    fullname: Bareche
– volume: 23
  start-page: 1
  year: 2022
  ident: ref_15
  article-title: Pathological complete response following cisplatin or carboplatin-based neoadjuvant chemotherapy for triple-negative breast cancer: A systematic review and meta-analysis
  publication-title: Exp. Ther. Med.
  contributor:
    fullname: Vidra
– volume: 12
  start-page: 457
  year: 2021
  ident: ref_32
  article-title: Classification of triple-negative breast cancers through a Boolean network model of the epithelial-mesenchymal transition
  publication-title: Cell Syst.
  doi: 10.1016/j.cels.2021.04.007
  contributor:
    fullname: Zapperi
– ident: ref_26
  doi: 10.1371/journal.pone.0017795
– ident: ref_12
  doi: 10.1186/1471-2407-7-203
– volume: 19
  start-page: 1261
  year: 2008
  ident: ref_10
  article-title: p53 status and efficacy of primary anthracyclines/alkylating agent-based regimen according to breast cancer molecular classes
  publication-title: Ann. Oncol.
  doi: 10.1093/annonc/mdn039
  contributor:
    fullname: Bidard
– volume: 115
  start-page: 5902
  year: 2018
  ident: ref_47
  article-title: Topography of epithelial-mesenchymal plasticity
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1722609115
  contributor:
    fullname: Zapperi
– volume: 351
  start-page: 2817
  year: 2004
  ident: ref_21
  article-title: A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer
  publication-title: N. Engl. J. Med.
  doi: 10.1056/NEJMoa041588
  contributor:
    fullname: Paik
– volume: 57
  start-page: 1245
  year: 2020
  ident: ref_6
  article-title: Triple-negative breast cancer therapy: Current and future perspectives (Review)
  publication-title: Int. J. Oncol.
  doi: 10.3892/ijo.2020.5135
  contributor:
    fullname: Won
– volume: 68
  start-page: 989
  year: 2008
  ident: ref_35
  article-title: Epithelial-mesenchymal transition in breast cancer relates to the basal-like phenotype
  publication-title: Cancer Res.
  doi: 10.1158/0008-5472.CAN-07-2017
  contributor:
    fullname: Hardisson
– volume: 21
  start-page: 171
  year: 2005
  ident: ref_25
  article-title: Outcome signature genes in breast cancer: Is there a unique set?
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bth469
  contributor:
    fullname: Kela
– volume: 110
  start-page: 876
  year: 2007
  ident: ref_1
  article-title: Differences in breast carcinoma characteristics in newly diagnosed African–American and Caucasian patients: A single-institution compilation compared with the National Cancer Institute’s Surveillance, Epidemiology, and end results database
  publication-title: Cancer Interdiscip. Int. J. Am. Cancer Soc.
  contributor:
    fullname: Morris
– ident: ref_19
  doi: 10.3390/ijms24032969
– volume: 9
  start-page: 176
  year: 2019
  ident: ref_5
  article-title: Insights into Molecular Classifications of Triple-Negative Breast Cancer: Improving Patient Selection for Treatment
  publication-title: Cancer Discov.
  doi: 10.1158/2159-8290.CD-18-1177
  contributor:
    fullname: Lin
– volume: 8
  start-page: 220
  year: 2020
  ident: ref_46
  article-title: Comparative Study of Transcriptomics-Based Scoring Metrics for the Epithelial-Hybrid-Mesenchymal Spectrum
  publication-title: Front. Bioeng. Biotechnol.
  doi: 10.3389/fbioe.2020.00220
  contributor:
    fullname: Chakraborty
– volume: 339
  start-page: 580
  year: 2013
  ident: ref_42
  article-title: Circulating breast tumor cells exhibit dynamic changes in epithelial and mesenchymal composition
  publication-title: Science
  doi: 10.1126/science.1228522
  contributor:
    fullname: Yu
– volume: 9
  start-page: 26406
  year: 2018
  ident: ref_52
  article-title: Triple negative breast cancer subtypes and pathologic complete response rate to neoadjuvant chemotherapy
  publication-title: Oncotarget
  doi: 10.18632/oncotarget.25413
  contributor:
    fullname: Santonja
– volume: 13
  start-page: 674
  year: 2016
  ident: ref_4
  article-title: Triple-negative breast cancer: Challenges and opportunities of a heterogeneous disease
  publication-title: Nat. Rev. Clin. Oncol.
  doi: 10.1038/nrclinonc.2016.66
  contributor:
    fullname: Bianchini
– volume: 124
  start-page: 133
  year: 2010
  ident: ref_13
  article-title: Effect of neoadjuvant anthracycline-taxane-based chemotherapy in different biological breast cancer phenotypes: Overall results from the GeparTrio study
  publication-title: Breast Cancer Res. Treat.
  doi: 10.1007/s10549-010-1103-9
  contributor:
    fullname: Huober
– volume: 305
  start-page: 1873
  year: 2011
  ident: ref_51
  article-title: A genomic predictor of response and survival following taxane-anthracycline chemotherapy for invasive breast cancer
  publication-title: JAMA
  doi: 10.1001/jama.2011.593
  contributor:
    fullname: Hatzis
– volume: 30
  start-page: 1796
  year: 2012
  ident: ref_9
  article-title: Definition and impact of pathologic complete response on prognosis after neoadjuvant chemotherapy in various intrinsic breast cancer subtypes
  publication-title: J. Clin. Oncol.
  doi: 10.1200/JCO.2011.38.8595
  contributor:
    fullname: Untch
– volume: 35
  start-page: 556
  year: 2017
  ident: ref_16
  article-title: Pembrolizumab (pembro)+ chemotherapy (chemo) as neoadjuvant treatment for triple negative breast cancer (TNBC): Preliminary results from KEYNOTE-173
  publication-title: J. Clin. Oncol.
  doi: 10.1200/JCO.2017.35.15_suppl.556
  contributor:
    fullname: Schmid
– volume: 7
  start-page: 27067
  year: 2016
  ident: ref_43
  article-title: Stability of the hybrid epithelial/mesenchymal phenotype
  publication-title: Oncotarget
  doi: 10.18632/oncotarget.8166
  contributor:
    fullname: Jolly
– ident: ref_7
  doi: 10.12688/f1000research.18888.1
– volume: 26
  start-page: 105799
  year: 2023
  ident: ref_20
  article-title: Identifying biomarkers of differential chemotherapy response in TNBC patient-derived xenografts with a CTD/WGCNA approach
  publication-title: Iscience
  doi: 10.1016/j.isci.2022.105799
  contributor:
    fullname: Petrosyan
– volume: 3
  start-page: 100851
  year: 2022
  ident: ref_27
  article-title: Artificial intelligence in breast cancer diagnostics
  publication-title: Cell Rep. Med.
  doi: 10.1016/j.xcrm.2022.100851
  contributor:
    fullname: Zapperi
– volume: 11
  start-page: 324
  year: 2017
  ident: ref_14
  article-title: The role of carboplatin in the neoadjuvant chemotherapy treatment of triple negative breast cancer
  publication-title: Oncol. Rev.
  contributor:
    fullname: Castrellon
– volume: 77
  start-page: 6415
  year: 2017
  ident: ref_44
  article-title: Survival Outcomes in Cancer Patients Predicted by a Partial EMT Gene Expression Scoring Metric
  publication-title: Cancer Res.
  doi: 10.1158/0008-5472.CAN-16-3521
  contributor:
    fullname: George
SSID ssj0023259
Score 2.4114902
Snippet It would be highly desirable to find prognostic and predictive markers for triple-negative breast cancer (TNBC), a strongly heterogeneous and invasive breast...
SourceID doaj
pubmedcentral
proquest
gale
crossref
pubmed
SourceType Open Website
Open Access Repository
Aggregation Database
Index Database
StartPage 6422
SubjectTerms Adjuvant treatment
Antineoplastic Combined Chemotherapy Protocols - therapeutic use
Breast cancer
Cancer
Cancer therapies
Chemotherapy
Classification
Clinical trials
Comparative analysis
Disease-Free Survival
drug response
Epithelial-Mesenchymal Transition - genetics
epithelial–mesenchymal transition
Gene expression
Gene Expression Profiling
Humans
Immunotherapy
Lymphatic system
Machine learning
Medical prognosis
Metastasis
Neoadjuvant Therapy - methods
Patients
Statistical analysis
Stem cells
Surgery
Transcriptomics
Triple Negative Breast Neoplasms - drug therapy
Triple Negative Breast Neoplasms - genetics
triple-negative breast cancer
Tumors
SummonAdditionalLinks – databaseName: DOAJ: Directory of Open Access Journals
  dbid: DOA
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV3NatwwEB5KoNBLadM_p0lRoaUnE69kWdYxCQmhkD2UBHIz-nM3oWuHjfewt75D3zBPkhnZu6zJIZfejKXFsmZGM5935huAb5mRykllU6O9T9ES0ea8Dmkh6yB1XevM0KeBi2lxfpX_vJbXW62-KCespwfuN-5QBJspa2ReOInQRWtrdXCltHlhS4wM4-k7kWswNUAtwWObtAl6H3ysLvqUd4EA__Dmdn5PMAYDbz5yRpGz_-nJvOWaxmmTW37o7A28HgJIdtQv_C28CM0uvOxbSq7ewRLlzn71ia-BtTW7XNCn9HQafkeKb3ZMWegdOyFpL1jXsmlojb9dYkSNd2dhPpRkrZhpPMNrdnpHdRt_UFEf_v67oGolN1vNcQ3Rz8WUr_dwdXZ6eXKeDq0VUtzFokvzWhrPnVEaIUlwmbfoK62yyjtV4vFN7e14iZC14A4BhzeEJL2oEe84wb0VH2CnaZvwCZgX2jolCsnrLK-9sMLl0gU8Za3SKpgEvq_3uLrrGTQqRB4ki2pbFgkckwA2c4j3Ot5AbagGbaie04YEfpD4KrJOlJEzQ5EBLpV4rqojhRErAnEhE9gfzUSrcuPhtQJUg1XfV1xpYtySvEzg62aYfkmZak1olzinpLJU-rM3gY-9vmxeSagsJwbCBMqRJo3eeTzS3Mwi5_eEUkARy-_9j136DK842gil0nG9DzvdYhkOMLbq7JdoRo_N7yND
  priority: 102
  providerName: Directory of Open Access Journals
– databaseName: AUTh Library subscriptions: ProQuest Central
  dbid: BENPR
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1ba9swFD50LYO9jN3nrRsabOzJJJEsy3oaTUkJg4ZRWuib0c1Ny2JnqfOQt_2H_cP9kp1jO1nMYG_GkkHyuX7SuQB8HBqpnFQ2Ntr7GCURZc7rEKeyCFIXhR4aOho4n6XTq-Trtbw-gOk2F4bCKrc6sVHUvnJ0Rj7gSlO1I8mzgbF0CuDqwZflj5j6R9E9a9dM4wEc8VFCF7ZH48ns28UOfAneNE4boT3Chei0DYIXCPkHt3eLewI26Irznnlqqvj_q6v3jFU_kHLPMp09gcedS8lOWh54CgehfAYP2yaTm-ewRk5gF20obGBVwS5XdLgez8JNU_SbjSkuvWanRP8Vqys2C5Xxd2v0sfHtPCy6JK0NM6Vn-MwmS8rk-I6s-_vnr3PKX3LzzQLX0Fi-JgjsBVydTS5Pp3HXbCF2MknrOCmk8dwZpRGkBDf0Fq2nVVZ5pzJU6NTwjmcIYlPuEIJ4Q9jSiwIRkBPcW_ESDsuqDK-BeaGtUwJpVQyTwgsrXCJdQL1rlVbBRPBp-4_zZVtTI0csQrTI92kRwZgIsJtDlbCbF9XqJu8EKxfBDpU1uAfcB2J9ba0OLpM2SW2GyCGCz0S-nOSVuMZ0aQe4VKp8lZ8o9GERmgsZwXFvJsqZ6w9vGSDv5Pw-_8uVEXzYDdOXFLtWhmqNczJKVKXr3whetfyy25JQw4RqEkaQ9Tipt-f-SHk7b6qAjygoFNH9m_-v6y084sj9FDbH9TEc1qt1eId-VG3fdyLyB4aAIB8
  priority: 102
  providerName: ProQuest
– databaseName: Scholars Portal Journals: Open Access
  dbid: M48
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwjV1ba9RAFB5KRfBFvButMoLiUzTOJZN5EGlLSxF2H6QLfRvmlm5LN2nTLLhv_gf_ob_Ec5LssqE--BYyE8jJuX6TcyHkfWal8lK51OoQUtBE0LmgY5rLMkpdljqzeDQwmeYnM_H9TJ7tkPW00eED3v4T2uE8qVlz9ennzeobKPxXRJwA2T9fXC5uEZhAKA3G-B4TXKCsT8TmfwKEDd3YNDzwSNFA9ynwd54eOaeuh_9dS73lqsZplFt-6fgReTgElHS_l4DHZCdWT8j9fsTk6ilZghzQH30ibKR1SU8bPFpPp_G8a_lNDzArvaWHyP2GtjWdxtqGyyVE2HB3HhdDidaK2ipQuKZH11jHcQWC--fX7wlWL_n5agHv0Pm9LgXsGZkdH50enqTDqIXUS5G3qSilDcxbpQGiRJ8FB77TKaeCVwWYcxx3xwqAsDnzAECCRWQZeAn4x3MWHH9Odqu6ii8JDVw7r3guWZmJMnDHvZA-gtV1SqtoE_Jh_Y3Ndd9RwwASQV6YbV4k5AAZsNmDfbC7G3Vzbga1Mjy6TDkLNAAdgPS1czr6QjqRuwJwQ0I-IvsMyg_wyNuh6ABeFftemX0FESwAcy4TsjfaCVrmx8trATBrITVMaezAJVmRkHebZXwSM9eqWC9hT4FlqvjzNyEvennZkMRVJrAjYUKKkSSNaB6vVBfzrgf4F0wJBWz_6r8JfE0eMFAEzJ9jeo_sts0yvoGAqnVvO135CxjQIag
  priority: 102
  providerName: Scholars Portal
Title The Response of Triple-Negative Breast Cancer to Neoadjuvant Chemotherapy and the Epithelial-Mesenchymal Transition
URI https://www.ncbi.nlm.nih.gov/pubmed/37047393
https://www.proquest.com/docview/2799716528/abstract/
https://search.proquest.com/docview/2800621559
https://pubmed.ncbi.nlm.nih.gov/PMC10094549
https://doaj.org/article/3eb07ba546c544699bb9ec85b46b8729
Volume 24
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1La9tAEF6SlEIvpe-qTc0WWnpSrGq1Wu0xNnZDwSaEBHwT-1LsEEnGkQ--5T_kH_aXdEYPY9FbL0JoV7CrmdmZb_XNLCHfAsWF4UL7SlrrgyWCzVnp_Jhnjsssk4HCrYHZPL64iX4v-OKIxF0uTE3aN3p1VtznZ8VqWXMr17kZdjyx4eVs_BP5cABshsfkWDDWYfQWZjGI6BuKOwNAP1zd5Q8IWyDQDnvOp67R_-9KfOCK-jTJA78zfUVetgEjPW8G9pocueINed4cIbl7S7YgZ3rVEF0dLTN6vcGtc3_ubuuS3nSErPOKjlG6G1qVdO5KZe-2EEHD06XL2xSsHVWFpXBPJ2vM07gHxfzz-DTD7CSz3OUwhtqv1RSvd-RmOrkeX_jtUQq-4VFc-VHGlQ2NEhIgiDOB1eAbtdDCGpHAco3H2YUJQNQ4NAAwrELkaFkG-Maw0Gr2npwUZeE-EmqZ1EawmIdZEGWWaWYibhysqlpI4ZRHvnffOF03FTNSQBooi_RQFh4ZoQD2fbDOdf2g3NymrbRT5nQgtII5wDwAyUutpTMJ11GsE8AFHvmB4kvRGkFGRrVJBTBUrGuVnguIUAF4M-6R015PsCLTb-4UIG2t-CENhcQKWzxMPPJ134xvIjOtcOUW-iSYhoo_dz3yodGX_ZSYCCKsOOiRpKdJvTn3W0Dl6xrfnYp_-v9XP5MXIVgDEuZCeUpOqs3WfYEIqtIDMJuFgGsy_TUgz0aT-eXVoN6NGKBn43CdRcmgNqu__OsmxA
link.rule.ids 230,315,733,786,790,870,891,2115,2236,12083,12792,21416,24346,27957,27958,31754,31755,33408,33409,33779,33780,43345,43635,43840,53827,53829,74102,74392,74659
linkProvider National Library of Medicine
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1bb9MwFLZgCMEL4joCA4wE4ilaZsdx_IS2aVOBtQ-ok_pm-ZZ1E01Kmz70jf_AP-SXcE6Sdo2QeKtiV7V7bv6c75xDyIfECOmEtLFR3sdgiWBzXoU4E0UQqihUYvBqYDjKBpfp14mYdBduy45WufGJjaP2lcM78kMmFVY7Eiz_PP8ZY9cofLvatdC4S-6lnKdI6ZOTW8DFWdMs7QhiEPy4ylriOweYf3h9M1simIHjN-uFpKZy_7_-eSdA9cmTO9Ho_DF51B0j6XEr9yfkTiifkvttY8n1M7IC6dPvLf010Kqg4wVeqMejcNUU-qYnyEWv6SnKfEHrio5CZfzNCs7V8HQaZl1i1pqa0lP4TM_mmL3xA9T1z6_fQ8xZctP1DNbQRLuG-PWcXJ6fjU8HcddgIXYizeo4LYTxzBmpAJgEl3gLEdNKK72TOThxbHLHcgCuGXMAO7xBPOl5AajHceYtf0H2yqoMLwn1XFknOcinSNLCc8tdKlwAX2ulksFE5OPmP9bzto6GBvyBstC7sojICQpgOwerXzcPqsWV7oxJ82ATaQ3sAfYB-F5Zq4LLhU0zmwNaiMgnFJ9GGwUZOdOlGsBSsdqVPpZwbgU4zkVEDnozwbZcf3ijALqz7aW-1cSIvN8O4zeRr1aGagVzckxOxVe-Edlv9WW7JS6TFOsQRiTvaVJvz_2R8nraVP4-QiIoIPpX_1_XO_JgMB5e6Isvo2-vyUMGloC0OaYOyF69WIU3cI6q7dvGWP4C4nsd7A
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1bb9MwFLZgE4gXxJ2MAUYC8RQ1i-M4fkLraDUui6Zpk_YW-ZZ1E026Nn3oG_-Bf8gv4ZzELY2QeKtiV7Jzbv6c75xDyPtIcWG40KGS1oZgiWBzVrow5aXjsixlpPBq4CRPjy-Sr5f80vOfFp5WufaJraO2tcE78kEsJFY74nE2KD0t4vTz-NPsNsQOUvil1bfTuEt2RZJy0PDd4Sg_PdvALxa3rdMOICLBUmTa0eAZgP7B9c10gdAGDuNxL0C1dfz_9dZb4apPpdyKTeNH5KE_VNLDTgsekzuuekLudW0mV0_JEnSBnnVkWEfrkp7P8Xo9zN1VW_abDpGZ3tAj1IA5bWqau1rZmyWcsuHpxE19mtaKqspS-E1HM8zl-AHK-_vnrxPMYDKT1RTW0Ma-lgb2jFyMR-dHx6FvtxAanqRNmJRc2dgoIQGmOBNZDfFTCy2sERm4dGx5F2cAY9PYAAixCtGlZSVgIMNiq9lzslPVlXtJqGVSG8FAWmWUlJZpZhJuHHheLaRwKiAf1u-4mHVVNQpAIyiLYlsWARmiADZzsBZ2-6CeXxXetArmdCS0gj3APgDtS62lMxnXSaozwA4B-YjiK9BiQUZG-cQDWCrWvioOBZxiAZwzHpD93kywNNMfXitA4S19UfzVy4C82wzjP5G9Vrl6CXMyTFXFD8ABedHpy2ZLTEQJViUMSNbTpN6e-yPV9aStA36AtFDA93v_X9dbch8spfj-Jf_2ijyIwRCQQxfLfbLTzJfuNRyqGv3GW8sfLCYjjw
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=The+Response+of+Triple-Negative+Breast+Cancer+to+Neoadjuvant+Chemotherapy+and+the+Epithelial%E2%80%93Mesenchymal+Transition&rft.jtitle=International+journal+of+molecular+sciences&rft.au=Zapperi%2C+Stefano&rft.au=La+Porta%2C+Caterina+A.+M&rft.date=2023-03-29&rft.pub=MDPI+AG&rft.issn=1422-0067&rft.eissn=1422-0067&rft.volume=24&rft.issue=7&rft_id=info:doi/10.3390%2Fijms24076422&rft.externalDocID=A751927435
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1422-0067&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1422-0067&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1422-0067&client=summon