Discovery of a small-molecule inhibitor and cellular probe of Keap1–Nrf2 protein–protein interaction

A high-throughput screen (HTS) of the MLPCN library using a homogenous fluorescence polarization assay identified a small molecule as a first-in-class direct inhibitor of Keap1–Nrf2 protein–protein interaction. The HTS hit has three chiral centers; a combination of flash and chiral chromatographic s...

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Published inBioorganic & medicinal chemistry letters Vol. 23; no. 10; pp. 3039 - 3043
Main Authors Hu, Longqin, Magesh, Sadagopan, Chen, Lin, Wang, Lili, Lewis, Timothy A., Chen, Yu, Khodier, Carol, Inoyama, Daigo, Beamer, Lesa J., Emge, Thomas J., Shen, Jian, Kerrigan, John E., Kong, Ah-Ng Tony, Dandapani, Sivaraman, Palmer, Michelle, Schreiber, Stuart L., Munoz, Benito
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LanguageEnglish
Published OXFORD Elsevier Ltd 15.05.2013
Elsevier
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Abstract A high-throughput screen (HTS) of the MLPCN library using a homogenous fluorescence polarization assay identified a small molecule as a first-in-class direct inhibitor of Keap1–Nrf2 protein–protein interaction. The HTS hit has three chiral centers; a combination of flash and chiral chromatographic separation demonstrated that Keap1-binding activity resides predominantly in one stereoisomer (SRS)-5 designated as ML334 (LH601A), which is at least 100× more potent than the other stereoisomers. The stereochemistry of the four cis isomers was assigned using X-ray crystallography and confirmed using stereospecific synthesis. (SRS)-5 is functionally active in both an ARE gene reporter assay and an Nrf2 nuclear translocation assay. The stereospecific nature of binding between (SRS)-5 and Keap1 as well as the preliminary but tractable structure–activity relationships support its use as a lead for our ongoing optimization
AbstractList A high-throughput screen (HTS) of the MLPCN library using a homogenous fluorescence polarization assay identified a small molecule as a first-in-class direct inhibitor of Keap1–Nrf2 protein–protein interaction. The HTS hit has three chiral centers; a combination of flash and chiral chromatographic separation demonstrated that Keap1-binding activity resides predominantly in one stereoisomer (SRS)-5 designated as ML334 (LH601A), which is at least 100× more potent than the other stereoisomers. The stereochemistry of the four cis isomers was assigned using X-ray crystallography and confirmed using stereospecific synthesis. (SRS)-5 is functionally active in both an ARE gene reporter assay and an Nrf2 nuclear translocation assay. The stereospecific nature of binding between (SRS)-5 and Keap1 as well as the preliminary but tractable structure–activity relationships support its use as a lead for our ongoing optimization
A high-throughput screen (HTS) of the MLPCN library using a homogenous fluorescence polarization assay identified a small molecule as a first-in-class direct inhibitor of Keap1-Nrf2 protein-protein interaction. The HTS hit has three chiral centers; a combination of flash and chiral chromatographic separation demonstrated that Keap1-binding activity resides predominantly in one stereoisomer (SRS)-5 designated as ML334 (LH601A), which is at least 100× more potent than the other stereoisomers. The stereochemistry of the four cis isomers was assigned using X-ray crystallography and confirmed using stereospecific synthesis. (SRS)-5 is functionally active in both an ARE gene reporter assay and an Nrf2 nuclear translocation assay. The stereospecific nature of binding between (SRS)-5 and Keap1 as well as the preliminary but tractable structure-activity relationships support its use as a lead for our ongoing optimization.
A high-throughput screen (HTS) of the MLPCN library using a homogenous fluorescence polarization assay identified a small molecule as a first-in-class direct inhibitor of Keap1-Nrf2 protein protein interaction. The HTS hit has three chiral centers; a combination of flash and chiral chromatographic separation demonstrated that Keap1-binding activity resides predominantly in one stereoisomer (SRS)-5 designated as ML334 (LH601A), which is at least 100x more potent than the other stereoisomers. The stereochemistry of the four cis isomers was assigned using X-ray crystallography and confirmed using stereospecific synthesis. (SRS)-5 is functionally active in both an ARE gene reporter assay and an Nrf2 nuclear translocation assay. The stereospecific nature of binding between (SRS)-5 and Keap1 as well as the preliminary but tractable structure activity relationships support its use as a lead for our ongoing optimization (C) 2013 Elsevier Ltd. All rights reserved.
A high-throughput screen (HTS) of the MLPCN library using a homogenous fluorescence polarization assay identified a small molecule as a first-in-class direct inhibitor of Keap1-Nrf2 protein-protein interaction. The HTS hit has three chiral centers; a combination of flash and chiral chromatographic separation demonstrated that Keap1-binding activity resides predominantly in one stereoisomer ( SRS )- 5 designated as ML334 (LH601A), which is at least 100× more potent than the other stereoisomers. The stereochemistry of the four cis isomers was assigned using X-ray crystallography and confirmed using stereospecific synthesis. ( SRS )- 5 is functionally active in both an ARE gene reporter assay and an Nrf2 nuclear translocation assay. The stereospecific nature of binding between ( SRS )- 5 and Keap1 as well as the preliminary but tractable structure-activity relationships support its use as a lead for our ongoing optimization.
Author Shen, Jian
Palmer, Michelle
Kong, Ah-Ng Tony
Chen, Lin
Kerrigan, John E.
Beamer, Lesa J.
Chen, Yu
Emge, Thomas J.
Munoz, Benito
Magesh, Sadagopan
Dandapani, Sivaraman
Wang, Lili
Hu, Longqin
Inoyama, Daigo
Lewis, Timothy A.
Khodier, Carol
Schreiber, Stuart L.
AuthorAffiliation a Department of Medicinal Chemistry, Ernest Mario School of Pharmacy, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA
c Chemical Biology Platform and Probe Development Center, Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA
b The Cancer Institute of New Jersey, New Brunswick, NJ 08901, USA
d Department of Biochemistry, University of Missouri, Columbia, MO, USA
e Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA
f Department of Pharmaceutics, Ernest Mario School of Pharmacy, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA
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ISSN 0960-894X
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Fri Dec 06 01:19:42 EST 2024
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Issue 10
Keywords Keap1
Nrf2 activation
Nrf2
Inhibitors of protein–protein interaction
TARGET
Inhibitors of protein-protein interaction
PATHWAY
BARDOXOLONE METHYL
MODULATORS
KIDNEY-FUNCTION
Language English
License Copyright © 2013 Elsevier Ltd. All rights reserved.
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Notes http://dx.doi.org/10.1016/j.bmcl.2013.03.013
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Snippet A high-throughput screen (HTS) of the MLPCN library using a homogenous fluorescence polarization assay identified a small molecule as a first-in-class direct...
Source Web of Science
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pubmed
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StartPage 3039
SubjectTerms Chemistry
Chemistry, Medicinal
Chemistry, Organic
chromatography
cis-trans isomers
Crystallography, X-Ray
Dose-Response Relationship, Drug
Drug Discovery
fluorescence
Fluorescence Polarization
High-Throughput Screening Assays
Humans
Inhibitors of protein–protein interaction
Intracellular Signaling Peptides and Proteins - metabolism
Isoquinolines - chemistry
Isoquinolines - pharmacology
Keap1
Kelch-Like ECH-Associated Protein 1
Life Sciences & Biomedicine
Models, Molecular
Molecular Imaging
Molecular Probes - chemistry
Molecular Probes - pharmacology
Molecular Structure
NF-E2-Related Factor 2 - metabolism
Nrf2
Nrf2 activation
Pharmacology & Pharmacy
Phthalimides - chemistry
Phthalimides - pharmacology
Physical Sciences
Protein Binding - drug effects
protein-protein interactions
reporter genes
Science & Technology
Small Molecule Libraries - chemistry
Small Molecule Libraries - pharmacology
stereochemistry
stereoisomers
Structure-Activity Relationship
structure-activity relationships
X-ray diffraction
Title Discovery of a small-molecule inhibitor and cellular probe of Keap1–Nrf2 protein–protein interaction
URI https://dx.doi.org/10.1016/j.bmcl.2013.03.013
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=Summon&SrcAuth=ProQuest&DestApp=WOS&DestLinkType=FullRecord&UT=000318750000042
https://www.ncbi.nlm.nih.gov/pubmed/23562243
https://pubmed.ncbi.nlm.nih.gov/PMC3648997
Volume 23
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