Changes in impact of HLA class I allele expression on HIV-1 plasma virus loads at a population level over time
HLA class I allele types have differential impacts on the level of the pVL and outcome of HIV-1 infection. While accumulations of CTL escape mutations at population levels have been reported, their actual impact on the level of the pVL remains unknown. In this study HLA class I types from 141 untrea...
Saved in:
Published in | Microbiology and immunology Vol. 54; no. 4; p. 196 |
---|---|
Main Authors | , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Australia
01.04.2010
|
Subjects | |
Online Access | Get more information |
Cover
Loading…
Abstract | HLA class I allele types have differential impacts on the level of the pVL and outcome of HIV-1 infection. While accumulations of CTL escape mutations at population levels have been reported, their actual impact on the level of the pVL remains unknown. In this study HLA class I types from 141 untreated, chronically HIV-1 infected Japanese patients diagnosed from 1995-2007 were determined, and the associations between expression of individual HLA alleles and level of pVL analyzed. It was found that the Japanese population has an extremely narrow HLA distribution compared to other ethnic groups, which may facilitate accumulation of CTL escape mutations at the population level. Moreover while they uniquely lack the most protective HLA-B27/B57, they commonly express the alleles that are protective in Caucasians (A11:10.4%, A26:11.55%, B51:8.6% and Cw14:12.7%). Cross-sectional analyses revealed no significant associations between expression of individual alleles and the level of the pVL. The patients were then stratified by the date of HIV diagnosis and the analyses repeated. It was found that, before 2001, B51+ individuals displayed significantly lower pVL than the other patients (median: 5150 vs. 18,000 RNA copies/ml, P=0.048); however thereafter this protective effect waned and disappeared, whereas no changes were observed for any other alleles over time. These results indicate that, at a population level, some HLA alleles have been losing their beneficial effects against HIV disease progression over time, thereby possibly posing a significant challenge for HIV vaccine development. However such detrimental effects may be limited to particular HLA class I alleles. |
---|---|
AbstractList | HLA class I allele types have differential impacts on the level of the pVL and outcome of HIV-1 infection. While accumulations of CTL escape mutations at population levels have been reported, their actual impact on the level of the pVL remains unknown. In this study HLA class I types from 141 untreated, chronically HIV-1 infected Japanese patients diagnosed from 1995-2007 were determined, and the associations between expression of individual HLA alleles and level of pVL analyzed. It was found that the Japanese population has an extremely narrow HLA distribution compared to other ethnic groups, which may facilitate accumulation of CTL escape mutations at the population level. Moreover while they uniquely lack the most protective HLA-B27/B57, they commonly express the alleles that are protective in Caucasians (A11:10.4%, A26:11.55%, B51:8.6% and Cw14:12.7%). Cross-sectional analyses revealed no significant associations between expression of individual alleles and the level of the pVL. The patients were then stratified by the date of HIV diagnosis and the analyses repeated. It was found that, before 2001, B51+ individuals displayed significantly lower pVL than the other patients (median: 5150 vs. 18,000 RNA copies/ml, P=0.048); however thereafter this protective effect waned and disappeared, whereas no changes were observed for any other alleles over time. These results indicate that, at a population level, some HLA alleles have been losing their beneficial effects against HIV disease progression over time, thereby possibly posing a significant challenge for HIV vaccine development. However such detrimental effects may be limited to particular HLA class I alleles. |
Author | Koga, Michiko Fujii, Takeshi Heckerman, David Nakamura, Hitomi Iwamoto, Aikichi Kawana-Tachikawa, Ai Odawara, Takashi Koibuchi, Tomohiko Miura, Toshiyuki |
Author_xml | – sequence: 1 givenname: Michiko surname: Koga fullname: Koga, Michiko organization: Division of Infectious Disease, Advanced Clinical Research Center, Department of Infectious Diseases and Applied Immunology, Research Hospital, and Department of Infectious Disease Control, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo, 108-8639, Japan – sequence: 2 givenname: Ai surname: Kawana-Tachikawa fullname: Kawana-Tachikawa, Ai – sequence: 3 givenname: David surname: Heckerman fullname: Heckerman, David – sequence: 4 givenname: Takashi surname: Odawara fullname: Odawara, Takashi – sequence: 5 givenname: Hitomi surname: Nakamura fullname: Nakamura, Hitomi – sequence: 6 givenname: Tomohiko surname: Koibuchi fullname: Koibuchi, Tomohiko – sequence: 7 givenname: Takeshi surname: Fujii fullname: Fujii, Takeshi – sequence: 8 givenname: Toshiyuki surname: Miura fullname: Miura, Toshiyuki – sequence: 9 givenname: Aikichi surname: Iwamoto fullname: Iwamoto, Aikichi |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/20377748$$D View this record in MEDLINE/PubMed |
BookMark | eNo1T9tKw0AU3IeKrdVfkPMDiXvLbvpYitpCwRf1tezlrKZskiWblvr3RtRhYGBmGJgbMuv6DgkBRks24eFYMiHrgkrOSk4nl1JOVXmZkQUVdVVUitI5ucn5OAWa1_KazDkVWmtZL0i3-TTdB2ZoOmjaZNwIfYDtfg0umpxhByZGjAh4SQPm3PQdTNzu3gsGaaq0Bs7NcMoQe-MzmBEMpD6dohl_uhHPGKE_4wBj0-ItuQomZrz70yV5e3p83WyL_cvzbrPeF66SlSqE5dMpL5VUVgYuV7J2gltcCVc5z4WomNVKqOCt9swrsaICtUUqAgYXkC_J_e9uOtkW_SENTWuGr8P_cf4NIVlb4w |
CitedBy_id | crossref_primary_10_1155_2012_508967 crossref_primary_10_1371_journal_ppat_1009177 crossref_primary_10_1186_1479_5876_9_208 crossref_primary_10_3389_fimmu_2017_00832 crossref_primary_10_1097_QAD_0b013e328360a4bd crossref_primary_10_1111_iji_12219 crossref_primary_10_3390_v4102080 crossref_primary_10_1097_QAD_0000000000001912 crossref_primary_10_1186_1742_4690_11_38 crossref_primary_10_1097_QAD_0000000000002515 crossref_primary_10_1371_journal_pone_0142086 crossref_primary_10_2217_fvl_11_134 crossref_primary_10_1371_journal_pone_0150397 crossref_primary_10_1097_QAD_0000000000000574 crossref_primary_10_2174_1570162X17666191017105910 crossref_primary_10_1016_j_humimm_2013_08_287 crossref_primary_10_1097_COH_0000000000000541 crossref_primary_10_2217_fvl_11_68 crossref_primary_10_1128_JVI_02122_12 |
ContentType | Journal Article |
DBID | CGR CUY CVF ECM EIF NPM |
DOI | 10.1111/j.1348-0421.2010.00206.x |
DatabaseName | Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed |
DatabaseTitle | MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) |
DatabaseTitleList | MEDLINE |
Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database |
DeliveryMethod | no_fulltext_linktorsrc |
Discipline | Biology |
ExternalDocumentID | 20377748 |
Genre | Research Support, Non-U.S. Gov't Journal Article |
GeographicLocations | Japan |
GeographicLocations_xml | – name: Japan |
GroupedDBID | --- -~X .3N .55 .GA .GJ .Y3 05W 0R~ 10A 123 1OC 29M 2WC 31~ 33P 36B 3O- 3SF 4.4 50Y 50Z 51W 51X 52M 52N 52O 52P 52S 52T 52U 52W 52X 53G 5HH 5LA 5RE 5VS 7.U 702 7PT 8-0 8-1 8-3 8-4 8-5 8UM 930 A03 A8Z AAESR AAEVG AAHQN AAMMB AAMNL AANHP AANLZ AAONW AASGY AAXRX AAYCA AAZKR ABCUV ABJNI ABPVW ACAHQ ACBWZ ACCZN ACGFO ACGFS ACPOU ACPRK ACRPL ACXBN ACXQS ACYXJ ADBBV ADEOM ADIZJ ADKYN ADMGS ADNMO ADOZA ADXAS ADZMN AEFGJ AEIGN AEIMD AENEX AEUYR AEYWJ AFBPY AFFNX AFFPM AFGKR AFRAH AFWVQ AFZJQ AGHNM AGQPQ AGXDD AGYGG AHBTC AHMBA AIAGR AIDQK AIDYY AITYG AIURR AJXKR ALAGY ALMA_UNASSIGNED_HOLDINGS ALUQN ALVPJ AMBMR AMYDB ATUGU AUFTA AZBYB AZFZN AZVAB BAFTC BAWUL BDRZF BFHJK BHBCM BMNLL BMXJE BNHUX BROTX BRXPI BY8 C45 CAG CGR COF CS3 CUY CVF D-E D-F DCZOG DIK DPXWK DRFUL DRSTM DU5 E3Z EBD EBS ECM EIF EJD EMB EMOBN F00 F01 F04 F5P FEDTE G-S G.N GODZA H.T H.X HF~ HGLYW HVGLF HZ~ J0M JSF JSH KQ8 LATKE LC2 LC3 LEEKS LH4 LITHE LOXES LP6 LP7 LUTES LW6 LYRES MEWTI MK4 MM. MRFUL MRSTM MSFUL MSSTM MXFUL MXSTM N04 N05 N9A NF~ NPM O66 O9- OHT OIG OVD OVT P2P P2W P2X P4D PQQKQ Q.N Q11 QB0 R.K RJT ROL RX1 RZJ SJN SUPJJ SV3 TEORI TKC TWZ UB1 V8K W8V W99 WBKPD WHG WIH WIK WIN WNSPC WOHZO WXSBR WYISQ X7M XG1 XOL XSB ZGI ZXP ZZTAW ~IA ~WT |
ID | FETCH-LOGICAL-c5456-3b2134d4646b4f24948c32be93c5cd23351b7636fdb7d1d63903e7be03fefcfe2 |
ISSN | 0385-5600 |
IngestDate | Mon Jul 21 06:01:52 EDT 2025 |
IsDoiOpenAccess | false |
IsOpenAccess | true |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 4 |
Language | English |
LinkModel | OpenURL |
MergedId | FETCHMERGED-LOGICAL-c5456-3b2134d4646b4f24948c32be93c5cd23351b7636fdb7d1d63903e7be03fefcfe2 |
OpenAccessLink | https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/j.1348-0421.2010.00206.x |
PMID | 20377748 |
ParticipantIDs | pubmed_primary_20377748 |
PublicationCentury | 2000 |
PublicationDate | 2010-Apr |
PublicationDateYYYYMMDD | 2010-04-01 |
PublicationDate_xml | – month: 04 year: 2010 text: 2010-Apr |
PublicationDecade | 2010 |
PublicationPlace | Australia |
PublicationPlace_xml | – name: Australia |
PublicationTitle | Microbiology and immunology |
PublicationTitleAlternate | Microbiol Immunol |
PublicationYear | 2010 |
SSID | ssj0027284 |
Score | 1.9882408 |
Snippet | HLA class I allele types have differential impacts on the level of the pVL and outcome of HIV-1 infection. While accumulations of CTL escape mutations at... |
SourceID | pubmed |
SourceType | Index Database |
StartPage | 196 |
SubjectTerms | Alleles CD4 Lymphocyte Count Cross-Sectional Studies Histocompatibility Antigens Class I - classification Histocompatibility Antigens Class I - genetics Histocompatibility Antigens Class I - immunology Histocompatibility Antigens Class I - metabolism Histocompatibility Testing HIV Infections - immunology HIV Infections - virology HIV-1 - genetics HIV-1 - immunology HIV-1 - metabolism HIV-1 - physiology HLA-B Antigens - genetics HLA-B Antigens - metabolism HLA-B51 Antigen Humans Japan Mutation RNA, Viral - blood T-Lymphocytes, Cytotoxic - immunology T-Lymphocytes, Cytotoxic - metabolism T-Lymphocytes, Cytotoxic - virology Time Factors Viral Load |
Title | Changes in impact of HLA class I allele expression on HIV-1 plasma virus loads at a population level over time |
URI | https://www.ncbi.nlm.nih.gov/pubmed/20377748 |
Volume | 54 |
hasFullText | |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lj9MwELa6ICQuiPcbzYFbFNTYzqMHDisEaoGFSxftbeWnFLWbVrTdFfwgficzdtpkq13xkKootas0yXxxxuNv5mPsNbeeVqN0ao32qcxH-MwJr9MSx0JNit1uRLnDR1-K8bH8eJKfDAa_eqylzVq_MT-vzCv5H6tiG9qVsmT_wbK7g2ID7qN9cYsWxu1f2TimBgRGa5ftOP58mBjyiZNJQkIpc0dl_CPdtaG1gfHkW5qRfPTqTCXn9ffNKpkvlF1RXqNKljtFr2ROhKKEOJ5Bgr7vxx7V-wWcKM_kUoj-UxuzJbJpPVvsmtWFalQ6JRLnDPfD4FR3IVmiebRR2R7ffvP2q8UfB1GkZKpmJAHVD1jQWvuO59ImalV5So5WfxCOlaRbsMneiJpFwdvrR3ohK_wHnm1penxYRAZoDwDLs4AAxF6J7m715969GtzbrgN2gLMRklelmNB2Ws-rWKSsvazLfLErT49KULeH3JvOBLdmepfdaecjcBjBdY8NXHOf3YoKpT8esKaFGNQNRIjBwgNCDALEYAIRYtBBDPATIAYRYhAgBgFioNagoIMYBIgBQQwIYg_Z8Yf303fjtJXoSA253qnQVBHQykIWWnpOtYaM4NqNhMmN5ULkmcY3WOGtLm1m0R0eCldqNxTeeeMdf8RuNIvGPWEg0HMtRKlzVXJpKoffMs1HRubKZoLbp-xxvFGny1iH5XR7C59d2_Oc3e4Q-ILd9Pjgu5foRa71q2DE35xmbN0 |
linkProvider | National Library of Medicine |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Changes+in+impact+of+HLA+class+I+allele+expression+on+HIV-1+plasma+virus+loads+at+a+population+level+over+time&rft.jtitle=Microbiology+and+immunology&rft.au=Koga%2C+Michiko&rft.au=Kawana-Tachikawa%2C+Ai&rft.au=Heckerman%2C+David&rft.au=Odawara%2C+Takashi&rft.date=2010-04-01&rft.issn=0385-5600&rft.volume=54&rft.issue=4&rft.spage=196&rft_id=info:doi/10.1111%2Fj.1348-0421.2010.00206.x&rft_id=info%3Apmid%2F20377748&rft_id=info%3Apmid%2F20377748&rft.externalDocID=20377748 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0385-5600&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0385-5600&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0385-5600&client=summon |