Salt stress under the scalpel – dissecting the genetics of salt tolerance

Summary Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish and saline irrigation. Salt tolerant crops could alleviate these losses while both increasing irrigation opportunities and reducing agricultur...

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Published inThe Plant journal : for cell and molecular biology Vol. 97; no. 1; pp. 148 - 163
Main Authors Morton, Mitchell J. L., Awlia, Mariam, Al‐Tamimi, Nadia, Saade, Stephanie, Pailles, Yveline, Negrão, Sónia, Tester, Mark
Format Journal Article
LanguageEnglish
Published England Blackwell Publishing Ltd 01.01.2019
John Wiley and Sons Inc
Subjects
Abiotic stress
Agronomy
Breaking down
Crops
Crops, Agricultural - genetics
Crops, Agricultural - physiology
Domestication
Environmental conditions
environmental factors
freshwater
Freshwater resources
Gene mapping
genes
Genetics
Genomic analysis
Genomics
Germplasm
Irrigation
Mathematical models
Molecular biology
Phenotype
Phenotyping
Quantitative trait loci
Quantitative Trait Loci - genetics
Saline soils
Salt
Salt Stress
Salt tolerance
Salt Tolerance - genetics
SI Genome to Phenome
Statistical analysis
Statistical genetics
Stress, Physiological
translation (genetics)
Online AccessGet full text
ISSN0960-7412
1365-313X
1365-313X
DOI10.1111/tpj.14189

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Abstract Summary Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish and saline irrigation. Salt tolerant crops could alleviate these losses while both increasing irrigation opportunities and reducing agricultural demands on dwindling freshwater resources. However, despite significant efforts, progress towards this goal has been limited, largely because of the genetic complexity of salt tolerance for agronomically important yield‐related traits. Consequently, the focus is shifting to the study of traits that contribute to overall tolerance, thus breaking down salt tolerance into components that are more genetically tractable. Greater consideration of the plasticity of salt tolerance mechanisms throughout development and across environmental conditions furthers this dissection. The demand for more sophisticated and comprehensive methodologies is being met by parallel advances in high‐throughput phenotyping and sequencing technologies that are enabling the multivariate characterisation of vast germplasm resources. Alongside steady improvements in statistical genetics models, forward genetics approaches for elucidating salt tolerance mechanisms are gaining momentum. Subsequent quantitative trait locus and gene validation has also become more accessible, most recently through advanced techniques in molecular biology and genomic analysis, facilitating the translation of findings to the field. Besides fuelling the improvement of established crop species, this progress also facilitates the domestication of naturally salt tolerant orphan crops. Taken together, these advances herald a promising era of discovery for research into the genetics of salt tolerance in plants. Significance Statement The improvement of salt tolerance in crops is imperative for addressing yield penalties in saline soils and enabling the use of brackish water for irrigation. Major advances in high‐throughput phenotyping, data analysis, sequencing technologies and statistical genetics are empowering investigations into the mechanisms and genetics of salt tolerance, drawing upon an ever‐expanding suite of genetic resources. Bridging the genotype–phenotype gap to gain insights into the mechanisms of salt tolerance in plants is becoming practical.
AbstractList Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish and saline irrigation. Salt tolerant crops could alleviate these losses while both increasing irrigation opportunities and reducing agricultural demands on dwindling freshwater resources. However, despite significant efforts, progress towards this goal has been limited, largely because of the genetic complexity of salt tolerance for agronomically important yield-related traits. Consequently, the focus is shifting to the study of traits that contribute to overall tolerance, thus breaking down salt tolerance into components that are more genetically tractable. Greater consideration of the plasticity of salt tolerance mechanisms throughout development and across environmental conditions furthers this dissection. The demand for more sophisticated and comprehensive methodologies is being met by parallel advances in high-throughput phenotyping and sequencing technologies that are enabling the multivariate characterisation of vast germplasm resources. Alongside steady improvements in statistical genetics models, forward genetics approaches for elucidating salt tolerance mechanisms are gaining momentum. Subsequent quantitative trait locus and gene validation has also become more accessible, most recently through advanced techniques in molecular biology and genomic analysis, facilitating the translation of findings to the field. Besides fuelling the improvement of established crop species, this progress also facilitates the domestication of naturally salt tolerant orphan crops. Taken together, these advances herald a promising era of discovery for research into the genetics of salt tolerance in plants.Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish and saline irrigation. Salt tolerant crops could alleviate these losses while both increasing irrigation opportunities and reducing agricultural demands on dwindling freshwater resources. However, despite significant efforts, progress towards this goal has been limited, largely because of the genetic complexity of salt tolerance for agronomically important yield-related traits. Consequently, the focus is shifting to the study of traits that contribute to overall tolerance, thus breaking down salt tolerance into components that are more genetically tractable. Greater consideration of the plasticity of salt tolerance mechanisms throughout development and across environmental conditions furthers this dissection. The demand for more sophisticated and comprehensive methodologies is being met by parallel advances in high-throughput phenotyping and sequencing technologies that are enabling the multivariate characterisation of vast germplasm resources. Alongside steady improvements in statistical genetics models, forward genetics approaches for elucidating salt tolerance mechanisms are gaining momentum. Subsequent quantitative trait locus and gene validation has also become more accessible, most recently through advanced techniques in molecular biology and genomic analysis, facilitating the translation of findings to the field. Besides fuelling the improvement of established crop species, this progress also facilitates the domestication of naturally salt tolerant orphan crops. Taken together, these advances herald a promising era of discovery for research into the genetics of salt tolerance in plants.
Summary Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish and saline irrigation. Salt tolerant crops could alleviate these losses while both increasing irrigation opportunities and reducing agricultural demands on dwindling freshwater resources. However, despite significant efforts, progress towards this goal has been limited, largely because of the genetic complexity of salt tolerance for agronomically important yield‐related traits. Consequently, the focus is shifting to the study of traits that contribute to overall tolerance, thus breaking down salt tolerance into components that are more genetically tractable. Greater consideration of the plasticity of salt tolerance mechanisms throughout development and across environmental conditions furthers this dissection. The demand for more sophisticated and comprehensive methodologies is being met by parallel advances in high‐throughput phenotyping and sequencing technologies that are enabling the multivariate characterisation of vast germplasm resources. Alongside steady improvements in statistical genetics models, forward genetics approaches for elucidating salt tolerance mechanisms are gaining momentum. Subsequent quantitative trait locus and gene validation has also become more accessible, most recently through advanced techniques in molecular biology and genomic analysis, facilitating the translation of findings to the field. Besides fuelling the improvement of established crop species, this progress also facilitates the domestication of naturally salt tolerant orphan crops. Taken together, these advances herald a promising era of discovery for research into the genetics of salt tolerance in plants. Significance Statement The improvement of salt tolerance in crops is imperative for addressing yield penalties in saline soils and enabling the use of brackish water for irrigation. Major advances in high‐throughput phenotyping, data analysis, sequencing technologies and statistical genetics are empowering investigations into the mechanisms and genetics of salt tolerance, drawing upon an ever‐expanding suite of genetic resources. Bridging the genotype–phenotype gap to gain insights into the mechanisms of salt tolerance in plants is becoming practical.
Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish and saline irrigation. Salt tolerant crops could alleviate these losses while both increasing irrigation opportunities and reducing agricultural demands on dwindling freshwater resources. However, despite significant efforts, progress towards this goal has been limited, largely because of the genetic complexity of salt tolerance for agronomically important yield‐related traits. Consequently, the focus is shifting to the study of traits that contribute to overall tolerance, thus breaking down salt tolerance into components that are more genetically tractable. Greater consideration of the plasticity of salt tolerance mechanisms throughout development and across environmental conditions furthers this dissection. The demand for more sophisticated and comprehensive methodologies is being met by parallel advances in high‐throughput phenotyping and sequencing technologies that are enabling the multivariate characterisation of vast germplasm resources. Alongside steady improvements in statistical genetics models, forward genetics approaches for elucidating salt tolerance mechanisms are gaining momentum. Subsequent quantitative trait locus and gene validation has also become more accessible, most recently through advanced techniques in molecular biology and genomic analysis, facilitating the translation of findings to the field. Besides fuelling the improvement of established crop species, this progress also facilitates the domestication of naturally salt tolerant orphan crops. Taken together, these advances herald a promising era of discovery for research into the genetics of salt tolerance in plants.
Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish and saline irrigation. Salt tolerant crops could alleviate these losses while both increasing irrigation opportunities and reducing agricultural demands on dwindling freshwater resources. However, despite significant efforts, progress towards this goal has been limited, largely because of the genetic complexity of salt tolerance for agronomically important yield‐related traits. Consequently, the focus is shifting to the study of traits that contribute to overall tolerance, thus breaking down salt tolerance into components that are more genetically tractable. Greater consideration of the plasticity of salt tolerance mechanisms throughout development and across environmental conditions furthers this dissection. The demand for more sophisticated and comprehensive methodologies is being met by parallel advances in high‐throughput phenotyping and sequencing technologies that are enabling the multivariate characterisation of vast germplasm resources. Alongside steady improvements in statistical genetics models, forward genetics approaches for elucidating salt tolerance mechanisms are gaining momentum. Subsequent quantitative trait locus and gene validation has also become more accessible, most recently through advanced techniques in molecular biology and genomic analysis, facilitating the translation of findings to the field. Besides fuelling the improvement of established crop species, this progress also facilitates the domestication of naturally salt tolerant orphan crops. Taken together, these advances herald a promising era of discovery for research into the genetics of salt tolerance in plants. The improvement of salt tolerance in crops is imperative for addressing yield penalties in saline soils and enabling the use of brackish water for irrigation. Major advances in high‐throughput phenotyping, data analysis, sequencing technologies and statistical genetics are empowering investigations into the mechanisms and genetics of salt tolerance, drawing upon an ever‐expanding suite of genetic resources. Bridging the genotype–phenotype gap to gain insights into the mechanisms of salt tolerance in plants is becoming practical.
Author Saade, Stephanie
Pailles, Yveline
Awlia, Mariam
Morton, Mitchell J. L.
Al‐Tamimi, Nadia
Negrão, Sónia
Tester, Mark
AuthorAffiliation 1 Division of Biological and Environmental Sciences and Engineering King Abdullah University of Science and Technology (KAUST) Thuwal 23955‐6900 Kingdom of Saudi Arabia
AuthorAffiliation_xml – name: 1 Division of Biological and Environmental Sciences and Engineering King Abdullah University of Science and Technology (KAUST) Thuwal 23955‐6900 Kingdom of Saudi Arabia
Author_xml – sequence: 1
  givenname: Mitchell J. L.
  surname: Morton
  fullname: Morton, Mitchell J. L.
  organization: King Abdullah University of Science and Technology (KAUST)
– sequence: 2
  givenname: Mariam
  surname: Awlia
  fullname: Awlia, Mariam
  organization: King Abdullah University of Science and Technology (KAUST)
– sequence: 3
  givenname: Nadia
  surname: Al‐Tamimi
  fullname: Al‐Tamimi, Nadia
  organization: King Abdullah University of Science and Technology (KAUST)
– sequence: 4
  givenname: Stephanie
  surname: Saade
  fullname: Saade, Stephanie
  organization: King Abdullah University of Science and Technology (KAUST)
– sequence: 5
  givenname: Yveline
  surname: Pailles
  fullname: Pailles, Yveline
  organization: King Abdullah University of Science and Technology (KAUST)
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  surname: Negrão
  fullname: Negrão, Sónia
  organization: King Abdullah University of Science and Technology (KAUST)
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  orcidid: 0000-0002-5085-8801
  surname: Tester
  fullname: Tester, Mark
  email: mark.tester@kaust.edu.sa
  organization: King Abdullah University of Science and Technology (KAUST)
BackLink https://www.ncbi.nlm.nih.gov/pubmed/30548719$$D View this record in MEDLINE/PubMed
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2018 The Authors.The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.
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SecondaryResourceType review_article
Snippet Summary Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish...
Salt stress limits the productivity of crops grown under saline conditions, leading to substantial losses of yield in saline soils and under brackish and...
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proquest
pubmed
crossref
wiley
SourceType Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 148
SubjectTerms Abiotic stress
Agronomy
Breaking down
Crops
Crops, Agricultural - genetics
Crops, Agricultural - physiology
Domestication
Environmental conditions
environmental factors
freshwater
Freshwater resources
Gene mapping
genes
Genetics
Genomic analysis
Genomics
Germplasm
Irrigation
Mathematical models
Molecular biology
Phenotype
Phenotyping
Quantitative trait loci
Quantitative Trait Loci - genetics
Saline soils
Salt
Salt Stress
Salt tolerance
Salt Tolerance - genetics
SI Genome to Phenome
Statistical analysis
Statistical genetics
Stress, Physiological
translation (genetics)
Title Salt stress under the scalpel – dissecting the genetics of salt tolerance
URI https://onlinelibrary.wiley.com/doi/abs/10.1111%2Ftpj.14189
https://www.ncbi.nlm.nih.gov/pubmed/30548719
https://www.proquest.com/docview/2166361006
https://www.proquest.com/docview/2157655108
https://www.proquest.com/docview/2220911314
https://pubmed.ncbi.nlm.nih.gov/PMC6850516
Volume 97
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