The protein kinase Pstol1 from traditional rice confers tolerance of phosphorus deficiency
A gene that is present in phosphate-deficiency-tolerant rice but absent from modern rice varieties is characterized and named phosphorus-starvation tolerance 1 ( PSTOL1 ); overexpression of PSTOL1 in rice species that naturally lack this gene confers tolerance to low phosphorus conditions, a finding...
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| Published in | Nature (London) Vol. 488; no. 7412; pp. 535 - 539 |
|---|---|
| Main Authors | , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
London
Nature Publishing Group UK
23.08.2012
Nature Publishing Group |
| Subjects | |
| Online Access | Get full text |
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| Abstract | A gene that is present in phosphate-deficiency-tolerant rice but absent from modern rice varieties is characterized and named phosphorus-starvation tolerance 1 (
PSTOL1
); overexpression of
PSTOL1
in rice species that naturally lack this gene confers tolerance to low phosphorus conditions, a finding that may have implications for agricultural productivity in rice-growing countries.
Rice tolerant to low-phosphate soils
Rice is a staple crop for much of Asia. Rice yields in the region are low, however, with limited availability of phosphorous fertilizers and the susceptibility of rain-fed cultivation systems to climate variation among the problems. In this study, Sigrid Heuer and colleagues report the characterization of a gene called phosphorus-starvation tolerance 1 (
PSTOL1
), which confers tolerance to phosphorus deficiency. The gene is present in the traditional rice variety Kasalath but absent from the rice reference genome and other phosphorus-starvation-intolerant modern varieties. PSTOL1 is shown to act as an enhancer of early root growth, thereby enabling plants to acquire more phosphorus and other nutrients. Introduction of this gene into locally adapted rice varieties should enhance productivity under low-phosphorus conditions.
As an essential macroelement for all living cells, phosphorus is indispensable in agricultural production systems. Natural phosphorus reserves are limited
1
, and it is therefore important to develop phosphorus-efficient crops. A major quantitative trait locus for phosphorus-deficiency tolerance,
Pup1
, was identified in the traditional
aus
-type rice variety Kasalath about a decade ago
2
,
3
. However, its functional mechanism remained elusive
4
,
5
until the locus was sequenced, showing the presence of a
Pup1
-specific protein kinase gene
6
, which we have named phosphorus-starvation tolerance 1 (
PSTOL1
). This gene is absent from the rice reference genome and other phosphorus-starvation-intolerant modern varieties
7
,
8
. Here we show that overexpression of
PSTOL1
in such varieties significantly enhances grain yield in phosphorus-deficient soil. Further analyses show that
PSTOL1
acts as an enhancer of early root growth, thereby enabling plants to acquire more phosphorus and other nutrients. The absence of
PSTOL1
and other genes—for example, the submergence-tolerance gene
SUB1A
—from modern rice varieties underlines the importance of conserving and exploring traditional germplasm. Introgression of this quantitative trait locus into locally adapted rice varieties in Asia and Africa is expected to considerably enhance productivity under low phosphorus conditions. |
|---|---|
| AbstractList | As an essential macroelement for all living cells, phosphorus is indispensable in agricultural production systems. Natural phosphorus reserves are limited, and it is therefore important to develop phosphorus-efficient crops. A major quantitative trait locus for phosphorus-deficiency tolerance, Pup1, was identified in the traditional aus-type rice variety Kasalath about a decade ago. However, its functional mechanism remained elusive until the locus was sequenced, showing the presence of a Pup1-specific protein kinase gene, which we have named phosphorus-starvation tolerance 1 (PSTOL1). This gene is absent from the rice reference genome and other phosphorus-starvation-intolerant modern varieties. Here we show that overexpression of PSTOL1 in such varieties significantly enhances grain yield in phosphorus-deficient soil. Further analyses show that PSTOL1 acts as an enhancer of early root growth, thereby enabling plants to acquire more phosphorus and other nutrients. The absence of PSTOL1 and other genes-for example, the submergence-tolerance gene SUB1A-from modern rice varieties underlines the importance of conserving and exploring traditional germplasm. Introgression of this quantitative trait locus into locally adapted rice varieties in Asia and Africa is expected to considerably enhance productivity under low phosphorus conditions. [PUBLICATION ABSTRACT] As an essential macroelement for all living cells, phosphorus is indispensable in agricultural production systems. Natural phosphorus reserves are limited, and it is therefore important to develop phosphorus-efficient crops. A major quantitative trait locus for phosphorus-deficiency tolerance, Pup1, was identified in the traditional aus-type rice variety Kasalath about a decade ago. However, its functional mechanism remained elusive until the locus was sequenced, showing the presence of a Pup1-specific protein kinase gene, which we have named phosphorus-starvation tolerance 1 (PSTOL1). This gene is absent from the rice reference genome and other phosphorus-starvation-intolerant modern varieties. Here we show that overexpression of PSTOL1 in such varieties significantly enhances grain yield in phosphorus-deficient soil. Further analyses show that PSTOL1 acts as an enhancer of early root growth, thereby enabling plants to acquire more phosphorus and other nutrients. The absence of PSTOL1 and other genes-for example, the submergence-tolerance gene SUB1A-from modern rice varieties underlines the importance of conserving and exploring traditional germplasm. Introgression of this quantitative trait locus into locally adapted rice varieties in Asia and Africa is expected to considerably enhance productivity under low phosphorus conditions.As an essential macroelement for all living cells, phosphorus is indispensable in agricultural production systems. Natural phosphorus reserves are limited, and it is therefore important to develop phosphorus-efficient crops. A major quantitative trait locus for phosphorus-deficiency tolerance, Pup1, was identified in the traditional aus-type rice variety Kasalath about a decade ago. However, its functional mechanism remained elusive until the locus was sequenced, showing the presence of a Pup1-specific protein kinase gene, which we have named phosphorus-starvation tolerance 1 (PSTOL1). This gene is absent from the rice reference genome and other phosphorus-starvation-intolerant modern varieties. Here we show that overexpression of PSTOL1 in such varieties significantly enhances grain yield in phosphorus-deficient soil. Further analyses show that PSTOL1 acts as an enhancer of early root growth, thereby enabling plants to acquire more phosphorus and other nutrients. The absence of PSTOL1 and other genes-for example, the submergence-tolerance gene SUB1A-from modern rice varieties underlines the importance of conserving and exploring traditional germplasm. Introgression of this quantitative trait locus into locally adapted rice varieties in Asia and Africa is expected to considerably enhance productivity under low phosphorus conditions. A gene that is present in phosphate-deficiency-tolerant rice but absent from modern rice varieties is characterized and named phosphorus-starvation tolerance 1 (PSTOL1); overexpression of PSTOL1 in rice species that naturally lack this gene confers tolerance to low phosphorus conditions, a finding that may have implications for agricultural productivity in rice-growing countries. As an essential macroelement for all living cells, phosphorus is indispensable in agricultural production systems. Natural phosphorus reserves are limited, and it is therefore important to develop phosphorus-efficient crops. A major quantitative trait locus for phosphorus-deficiency tolerance, Pup1, was identified in the traditional aus-type rice variety Kasalath about a decade ago. However, its functional mechanism remained elusive until the locus was sequenced, showing the presence of a Pup1-specific protein kinase gene, which we have named phosphorus-starvation tolerance 1 (PSTOL1). This gene is absent from the rice reference genome and other phosphorus-starvation-intolerant modern varieties. Here we show that overexpression of PSTOL1 in such varieties significantly enhances grain yield in phosphorus-deficient soil. Further analyses show that PSTOL1 acts as an enhancer of early root growth, thereby enabling plants to acquire more phosphorus and other nutrients. The absence of PSTOL1 and other genes-for example, the submergence-tolerance gene SUB1A-from modern rice varieties underlines the importance of conserving and exploring traditional germplasm. Introgression of this quantitative trait locus into locally adapted rice varieties in Asia and Africa is expected to considerably enhance productivity under low phosphorus conditions. A gene that is present in phosphate-deficiency-tolerant rice but absent from modern rice varieties is characterized and named phosphorus-starvation tolerance 1 ( PSTOL1 ); overexpression of PSTOL1 in rice species that naturally lack this gene confers tolerance to low phosphorus conditions, a finding that may have implications for agricultural productivity in rice-growing countries. Rice tolerant to low-phosphate soils Rice is a staple crop for much of Asia. Rice yields in the region are low, however, with limited availability of phosphorous fertilizers and the susceptibility of rain-fed cultivation systems to climate variation among the problems. In this study, Sigrid Heuer and colleagues report the characterization of a gene called phosphorus-starvation tolerance 1 ( PSTOL1 ), which confers tolerance to phosphorus deficiency. The gene is present in the traditional rice variety Kasalath but absent from the rice reference genome and other phosphorus-starvation-intolerant modern varieties. PSTOL1 is shown to act as an enhancer of early root growth, thereby enabling plants to acquire more phosphorus and other nutrients. Introduction of this gene into locally adapted rice varieties should enhance productivity under low-phosphorus conditions. As an essential macroelement for all living cells, phosphorus is indispensable in agricultural production systems. Natural phosphorus reserves are limited 1 , and it is therefore important to develop phosphorus-efficient crops. A major quantitative trait locus for phosphorus-deficiency tolerance, Pup1 , was identified in the traditional aus -type rice variety Kasalath about a decade ago 2 , 3 . However, its functional mechanism remained elusive 4 , 5 until the locus was sequenced, showing the presence of a Pup1 -specific protein kinase gene 6 , which we have named phosphorus-starvation tolerance 1 ( PSTOL1 ). This gene is absent from the rice reference genome and other phosphorus-starvation-intolerant modern varieties 7 , 8 . Here we show that overexpression of PSTOL1 in such varieties significantly enhances grain yield in phosphorus-deficient soil. Further analyses show that PSTOL1 acts as an enhancer of early root growth, thereby enabling plants to acquire more phosphorus and other nutrients. The absence of PSTOL1 and other genes—for example, the submergence-tolerance gene SUB1A —from modern rice varieties underlines the importance of conserving and exploring traditional germplasm. Introgression of this quantitative trait locus into locally adapted rice varieties in Asia and Africa is expected to considerably enhance productivity under low phosphorus conditions. |
| Audience | Academic |
| Author | Tecson-Mendoza, Evelyn Mae Wissuwa, Matthias Chin, Joong Hyoun Slamet-Loedin, Inez Gamuyao, Rico Pesaresi, Paolo Catausan, Sheryl Heuer, Sigrid Pariasca-Tanaka, Juan Dalid, Cheryl |
| Author_xml | – sequence: 1 givenname: Rico surname: Gamuyao fullname: Gamuyao, Rico organization: International Rice Research Institute (IRRI), DAPO Box 7777 Metro, Manila 1301, Philippines – sequence: 2 givenname: Joong Hyoun surname: Chin fullname: Chin, Joong Hyoun organization: International Rice Research Institute (IRRI), DAPO Box 7777 Metro, Manila 1301, Philippines – sequence: 3 givenname: Juan surname: Pariasca-Tanaka fullname: Pariasca-Tanaka, Juan organization: Japan International Research Center for Agricultural Sciences (JIRCAS), 1-1 Ohwashi, Tsukuba 305-8686, Japan – sequence: 4 givenname: Paolo surname: Pesaresi fullname: Pesaresi, Paolo organization: Dipartimento di Bioscienze, Università degli studi di Milano – sequence: 5 givenname: Sheryl surname: Catausan fullname: Catausan, Sheryl organization: International Rice Research Institute (IRRI), DAPO Box 7777 Metro, Manila 1301, Philippines – sequence: 6 givenname: Cheryl surname: Dalid fullname: Dalid, Cheryl organization: International Rice Research Institute (IRRI), DAPO Box 7777 Metro, Manila 1301, Philippines – sequence: 7 givenname: Inez surname: Slamet-Loedin fullname: Slamet-Loedin, Inez organization: International Rice Research Institute (IRRI), DAPO Box 7777 Metro, Manila 1301, Philippines – sequence: 8 givenname: Evelyn Mae surname: Tecson-Mendoza fullname: Tecson-Mendoza, Evelyn Mae organization: University of the Philippines – sequence: 9 givenname: Matthias surname: Wissuwa fullname: Wissuwa, Matthias organization: Japan International Research Center for Agricultural Sciences (JIRCAS), 1-1 Ohwashi, Tsukuba 305-8686, Japan – sequence: 10 givenname: Sigrid surname: Heuer fullname: Heuer, Sigrid email: s.heuer@cgiar.org organization: International Rice Research Institute (IRRI), DAPO Box 7777 Metro, Manila 1301, Philippines |
| BackLink | http://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26256111$$DView record in Pascal Francis https://www.ncbi.nlm.nih.gov/pubmed/22914168$$D View this record in MEDLINE/PubMed |
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| Keywords | Macronutrient(mineral) Monocotyledones Grains Enzyme Landrace(plant) Transferases Deficiency Non-specific serine/threonine protein kinase Gene overexpression Tolerance Phosphorus Cereal crop Quantitative trait loci Oryza Gene Gramineae Agricultural production Angiospermae Spermatophyta Yield Genome Cultivar |
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| References_xml | – reference: WissuwaMWegnerJAeNYanoMSubstitution mapping of Pup1: a major QTL increasing phosphorus uptake of rice from a phosphorus-deficient soilTheor. Appl. Genet.20021058908971:CAS:528:DC%2BD38XosVCntLs%3D1258291410.1007/s00122-002-1051-9 – reference: DaweDPandeySNelsonAPandeySRice in the Global Economy. Strategic Research and Policy Issues for Food Security2010535 – reference: ZhaoYHuYDaiMHuangLZhouD-XThe WUSCHEL-related homeobox gene WOX11 is required to activate shoot-borne crown root development in ricePlant Cell2009217367481:CAS:528:DC%2BD1MXlsFyltbo%3D19258439267169610.1105/tpc.108.061655 – reference: FalushDStephensMPritchardJKInference of population structure using multilocus genotype data: linked loci and correlated allele frequenciesGenetics2003164156715871:CAS:528:DC%2BD3sXnvF2ntrk%3D12930761146264810.1093/genetics/164.4.1567 – reference: InukaiYCrown rootless1, which is essential for crown root formation in rice, is a target of an AUXIN RESPONSE FACTOR in auxin signalingPlant Cell200517138713961:CAS:528:DC%2BD2MXksVKksrY%3D15829602109176210.1105/tpc.105.030981 – reference: ThomsonMJHigh-throughput single nucleotide polymorphism genotyping for breeding applications in rice using the BeadXpress platformMol. Breed.20112987588610.1007/s11032-011-9663-x1:CAS:528:DC%2BC38XkvFylsb8%3D – reference: GowdaVRPWater uptake dynamics under progressive drought stress in diverse accessions of the OryzaSNP panel of rice (Oryza sativa)Func. Plant Bio.20123940241110.1071/FP12015 – reference: ScarpellaESimonsEJMeijerAJMultiple regulatory elements contribute to the vascular-specific expression of the rice HD-Zip gene Oshox1 in ArabidopsisPlant Cell Physiol.200546140014101:CAS:528:DC%2BD2MXps1Oms74%3D1596490510.1093/pcp/pci153 – reference: VijSGiriJDansanaPKKapoorSTyagiAKThe receptor-like cytoplasmic kinase (OsRLCK) gene family in rice: organization, phylogenetic relationship, and expression during development and stressMol. Plant200817327501:CAS:528:DC%2BD1cXhtlWiu7fE1982557710.1093/mp/ssn047 – reference: MikiDShimamotoKSimple RNAi vectors for stable and transient suppression of gene function in ricePlant Cell Physiol.2004454904951:CAS:528:DC%2BD2cXjsFKhtbs%3D1511172410.1093/pcp/pch048 – reference: GregoryPDBarbariSHörzWTranscriptional control of phosphate-regulated genesFood Technol. Biotechnol.2000382953031:CAS:528:DC%2BD3MXltFGqtw%3D%3D – reference: HieiYIshidaYKasaokaKKomariTImproved frequency of transformation in rice and maize by treatment of immature embryos with centrifugation and heat prior to infection with Agrobacterium tumefaciensPlant Cell Tiss. Org.20068723324310.1007/s11240-006-9157-4 – reference: HaefeleSMHijmansRJSoil quality in rainfed lowland riceRice Today200983031 – reference: GomezMSMapping QTLs linked to physio-morphological and plant production traits under drought stress in rice (Oryza sativa L.) in the target environmentAm. J. Biochem. 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| Snippet | A gene that is present in phosphate-deficiency-tolerant rice but absent from modern rice varieties is characterized and named phosphorus-starvation tolerance 1... As an essential macroelement for all living cells, phosphorus is indispensable in agricultural production systems. Natural phosphorus reserves are limited, and... |
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| SubjectTerms | 631/208/729/743 631/61/447/2311 704/172 Adaptation, Physiological - genetics Agricultural production Agronomy. Soil science and plant productions Biological and medical sciences Breeding Cloning Droughts Fertilizers Fundamental and applied biological sciences. Psychology Gene expression Gene mapping Generalities. Genetics. Plant material Genes, Plant - genetics Genetic resources, diversity Genetics Genetics and breeding of economic plants Genome, Plant - genetics Genomes Humanities and Social Sciences Interspecific and intergeneric hybridization, introgressions Kinases letter Molecular Sequence Data multidisciplinary Oryza - classification Oryza - enzymology Oryza - genetics Oryza - physiology Phosphorus Phosphorus (Nutrient) Phosphorus - deficiency Phosphorylation Physiological aspects Plant breeding: fundamental aspects and methodology Plant growth Plant material Plant Proteins - genetics Plant Proteins - metabolism Plant Roots - enzymology Plant Roots - genetics Plant Roots - growth & development Plants, Genetically Modified Protein kinases Protein Kinases - genetics Protein Kinases - metabolism Proteins Quantitative Trait Loci - genetics Rice Science Submergence |
| Title | The protein kinase Pstol1 from traditional rice confers tolerance of phosphorus deficiency |
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