Gene expression profiling: monitoring transcription and translation products using DNA microarrays and proteomics

Novel and powerful technologies such as DNA microarrays and proteomics have made possible the analysis of the expression levels of multiple genes simultaneously both in health and disease. In combination, these technologies promise to revolutionize biology, in particular in the area of molecular med...

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Published inFEBS Letters Vol. 480; no. 1; pp. 2 - 16
Main Authors Celis, Julio E, Kruhøffer, Mogens, Gromova, Irina, Frederiksen, Casper, Østergaard, Morten, Thykjaer, Thomas, Gromov, Pavel, Yu, Jinsheng, Pálsdóttir, Hildur, Magnusson, Nils, Ørntoft, Torben F
Format Book Review Journal Article
LanguageEnglish
Published England Elsevier B.V 25.08.2000
Subjects
2D PAGE, two-dimensional polyacrylamide gel electrophoresis
Animals
Biopsy
Bladder cancer
Computational Biology - methods
Databases as Topic
Disease Models, Animal
Electrophoresis, Gel, Two-Dimensional - methods
Gene expression profile
Gene Expression Profiling - methods
Humans
IEF, isoelectric focusing
Immunohistochemistry
IPG, immobilized pH gradient
Microarray
Neoplasms - genetics
Neoplasms - metabolism
Neoplasms - pathology
NEPHGE, non-equilibrium pH gradient electrophoresis
Oligonucleotide Array Sequence Analysis - methods
Proteins - analysis
Proteins - genetics
Proteome
Transcription, Genetic - genetics
Two-dimensional gel electrophoresis
Immunohistochemistry
NEPHGE, non-equilibrium pH gradient electrophoresis
IPG, immobilized pH gradient
2D PAGE, two-dimensional polyacrylamide gel electrophoresis
Two-dimensional gel electrophoresis
Proteome
Microarray
IEF, isoelectric focusing
Bladder cancer
Gene expression profile
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Abstract Novel and powerful technologies such as DNA microarrays and proteomics have made possible the analysis of the expression levels of multiple genes simultaneously both in health and disease. In combination, these technologies promise to revolutionize biology, in particular in the area of molecular medicine as they are expected to reveal gene regulation events involved in disease progression as well as to pinpoint potential targets for drug discovery and diagnostics. Here, we review the current status of these technologies and highlight some studies in which they have been applied in concert to the analysis of biopsy specimens.
AbstractList Novel and powerful technologies such as DNA microarrays and proteomics have made possible the analysis of the expression levels of multiple genes simultaneously both in health and disease. In combination, these technologies promise to revolutionize biology, in particular in the area of molecular medicine as they are expected to reveal gene regulation events involved in disease progression as well as to pinpoint potential targets for drug discovery and diagnostics. Here, we review the current status of these technologies and highlight some studies in which they have been applied in concert to the analysis of biopsy specimens.
Author Pálsdóttir, Hildur
Gromova, Irina
Gromov, Pavel
Thykjaer, Thomas
Ørntoft, Torben F
Frederiksen, Casper
Østergaard, Morten
Kruhøffer, Mogens
Magnusson, Nils
Celis, Julio E
Yu, Jinsheng
Author_xml – sequence: 1
  givenname: Julio E
  surname: Celis
  fullname: Celis, Julio E
  email: jec@biokemi.au.dk
  organization: Department of Medical Biochemistry and Danish Centre for Human Genome Research, University of Aarhus, Ole Worms Alle, Bldg. 170, DK-8000 Aarhus C, Denmark
– sequence: 2
  givenname: Mogens
  surname: Kruhøffer
  fullname: Kruhøffer, Mogens
  organization: Molecular Diagnostic Laboratory, Department of Clinical Biochemistry, Aarhus University Hospital, Skejby, DK-8200 Aarhus N, Denmark
– sequence: 3
  givenname: Irina
  surname: Gromova
  fullname: Gromova, Irina
  organization: Department of Medical Biochemistry and Danish Centre for Human Genome Research, University of Aarhus, Ole Worms Alle, Bldg. 170, DK-8000 Aarhus C, Denmark
– sequence: 4
  givenname: Casper
  surname: Frederiksen
  fullname: Frederiksen, Casper
  organization: Molecular Diagnostic Laboratory, Department of Clinical Biochemistry, Aarhus University Hospital, Skejby, DK-8200 Aarhus N, Denmark
– sequence: 5
  givenname: Morten
  surname: Østergaard
  fullname: Østergaard, Morten
  organization: Department of Medical Biochemistry and Danish Centre for Human Genome Research, University of Aarhus, Ole Worms Alle, Bldg. 170, DK-8000 Aarhus C, Denmark
– sequence: 6
  givenname: Thomas
  surname: Thykjaer
  fullname: Thykjaer, Thomas
  organization: Molecular Diagnostic Laboratory, Department of Clinical Biochemistry, Aarhus University Hospital, Skejby, DK-8200 Aarhus N, Denmark
– sequence: 7
  givenname: Pavel
  surname: Gromov
  fullname: Gromov, Pavel
  organization: Department of Medical Biochemistry and Danish Centre for Human Genome Research, University of Aarhus, Ole Worms Alle, Bldg. 170, DK-8000 Aarhus C, Denmark
– sequence: 8
  givenname: Jinsheng
  surname: Yu
  fullname: Yu, Jinsheng
  organization: Molecular Diagnostic Laboratory, Department of Clinical Biochemistry, Aarhus University Hospital, Skejby, DK-8200 Aarhus N, Denmark
– sequence: 9
  givenname: Hildur
  surname: Pálsdóttir
  fullname: Pálsdóttir, Hildur
  organization: Department of Medical Biochemistry and Danish Centre for Human Genome Research, University of Aarhus, Ole Worms Alle, Bldg. 170, DK-8000 Aarhus C, Denmark
– sequence: 10
  givenname: Nils
  surname: Magnusson
  fullname: Magnusson, Nils
  organization: Department of Medical Biochemistry and Danish Centre for Human Genome Research, University of Aarhus, Ole Worms Alle, Bldg. 170, DK-8000 Aarhus C, Denmark
– sequence: 11
  givenname: Torben F
  surname: Ørntoft
  fullname: Ørntoft, Torben F
  organization: Molecular Diagnostic Laboratory, Department of Clinical Biochemistry, Aarhus University Hospital, Skejby, DK-8200 Aarhus N, Denmark
BackLink https://www.ncbi.nlm.nih.gov/pubmed/10967322$$D View this record in MEDLINE/PubMed
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ContentType Book Review
Journal Article
Copyright 2000 Federation of European Biochemical Societies
FEBS Letters 480 (2000) 1873-3468 © 2015 Federation of European Biochemical Societies
Copyright_xml – notice: 2000 Federation of European Biochemical Societies
– notice: FEBS Letters 480 (2000) 1873-3468 © 2015 Federation of European Biochemical Societies
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Issue 1
Keywords Immunohistochemistry
NEPHGE, non-equilibrium pH gradient electrophoresis
IPG, immobilized pH gradient
2D PAGE, two-dimensional polyacrylamide gel electrophoresis
Two-dimensional gel electrophoresis
Proteome
Microarray
IEF, isoelectric focusing
Bladder cancer
Gene expression profile
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2000; 18
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1999; 19
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1995; 16
2000; 24
2000; 21
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1999; 24
1975; 250
1997; 29
1953; 6
1999; 20
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1991; 5
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Snippet Novel and powerful technologies such as DNA microarrays and proteomics have made possible the analysis of the expression levels of multiple genes...
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SubjectTerms 2D PAGE, two-dimensional polyacrylamide gel electrophoresis
Animals
Biopsy
Bladder cancer
Computational Biology - methods
Databases as Topic
Disease Models, Animal
Electrophoresis, Gel, Two-Dimensional - methods
Gene expression profile
Gene Expression Profiling - methods
Humans
IEF, isoelectric focusing
Immunohistochemistry
IPG, immobilized pH gradient
Microarray
Neoplasms - genetics
Neoplasms - metabolism
Neoplasms - pathology
NEPHGE, non-equilibrium pH gradient electrophoresis
Oligonucleotide Array Sequence Analysis - methods
Proteins - analysis
Proteins - genetics
Proteome
Transcription, Genetic - genetics
Two-dimensional gel electrophoresis
Title Gene expression profiling: monitoring transcription and translation products using DNA microarrays and proteomics
URI https://dx.doi.org/10.1016/S0014-5793(00)01771-3
https://onlinelibrary.wiley.com/doi/abs/10.1016%2FS0014-5793%2800%2901771-3
https://www.ncbi.nlm.nih.gov/pubmed/10967322
https://search.proquest.com/docview/72248832
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