Methods for enrichment of novel electrochemically-active microorganisms
•Current methods for EAM enrichment have uncovered only a small part of EAM diversity.•Potentiostat-controlled electrochemical cells provide higher repeatability than MFC-based enrichment.•Microbial-rich environments like sediments and soil are preferable to wastewater as inocula for EAM enrichment....
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| Published in | Bioresource technology Vol. 195; pp. 273 - 282 |
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| Main Authors | , |
| Format | Journal Article |
| Language | English |
| Published |
England
Elsevier Ltd
01.11.2015
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| Subjects | |
| Online Access | Get full text |
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| Abstract | •Current methods for EAM enrichment have uncovered only a small part of EAM diversity.•Potentiostat-controlled electrochemical cells provide higher repeatability than MFC-based enrichment.•Microbial-rich environments like sediments and soil are preferable to wastewater as inocula for EAM enrichment.
Electrochemically-active microorganisms (EAM) are relevant to metal biogeochemistry and have applications in microbial fuel cells (MFCs), bioremediation, and bioelectrocatalysis. Most research conducted to date focuses on EAM hailing from two distinct genera, namely Shewanella and Geobacter, with a relatively limited number of EAM discovered in recent years. This review article summarises current approaches to novel EAM enrichment, in terms of inoculum choice, growth medium, reactor configuration, electrochemical characterisation and community profiling through metagenomics and metatranscriptomics. A novel roadmap for EAM enrichment and subsequent characterisation using environmental samples as a starting material is provided in order to increase throughput and hence the likelihood of discovering novel EAM. |
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| AbstractList | •Current methods for EAM enrichment have uncovered only a small part of EAM diversity.•Potentiostat-controlled electrochemical cells provide higher repeatability than MFC-based enrichment.•Microbial-rich environments like sediments and soil are preferable to wastewater as inocula for EAM enrichment.
Electrochemically-active microorganisms (EAM) are relevant to metal biogeochemistry and have applications in microbial fuel cells (MFCs), bioremediation, and bioelectrocatalysis. Most research conducted to date focuses on EAM hailing from two distinct genera, namely Shewanella and Geobacter, with a relatively limited number of EAM discovered in recent years. This review article summarises current approaches to novel EAM enrichment, in terms of inoculum choice, growth medium, reactor configuration, electrochemical characterisation and community profiling through metagenomics and metatranscriptomics. A novel roadmap for EAM enrichment and subsequent characterisation using environmental samples as a starting material is provided in order to increase throughput and hence the likelihood of discovering novel EAM. Electrochemically-active microorganisms (EAM) are relevant to metal biogeochemistry and have applications in microbial fuel cells (MFCs), bioremediation, and bioelectrocatalysis. Most research conducted to date focuses on EAM hailing from two distinct genera, namely Shewanella and Geobacter, with a relatively limited number of EAM discovered in recent years. This review article summarises current approaches to novel EAM enrichment, in terms of inoculum choice, growth medium, reactor configuration, electrochemical characterisation and community profiling through metagenomics and metatranscriptomics. A novel roadmap for EAM enrichment and subsequent characterisation using environmental samples as a starting material is provided in order to increase throughput and hence the likelihood of discovering novel EAM.Electrochemically-active microorganisms (EAM) are relevant to metal biogeochemistry and have applications in microbial fuel cells (MFCs), bioremediation, and bioelectrocatalysis. Most research conducted to date focuses on EAM hailing from two distinct genera, namely Shewanella and Geobacter, with a relatively limited number of EAM discovered in recent years. This review article summarises current approaches to novel EAM enrichment, in terms of inoculum choice, growth medium, reactor configuration, electrochemical characterisation and community profiling through metagenomics and metatranscriptomics. A novel roadmap for EAM enrichment and subsequent characterisation using environmental samples as a starting material is provided in order to increase throughput and hence the likelihood of discovering novel EAM. Electrochemically-active microorganisms (EAM) are relevant to metal biogeochemistry and have applications in microbial fuel cells (MFCs), bioremediation, and bioelectrocatalysis. Most research conducted to date focuses on EAM hailing from two distinct genera, namely Shewanella and Geobacter, with a relatively limited number of EAM discovered in recent years. This review article summarises current approaches to novel EAM enrichment, in terms of inoculum choice, growth medium, reactor configuration, electrochemical characterisation and community profiling through metagenomics and metatranscriptomics. A novel roadmap for EAM enrichment and subsequent characterisation using environmental samples as a starting material is provided in order to increase throughput and hence the likelihood of discovering novel EAM. |
| Author | Doyle, Lucinda Elizabeth Marsili, Enrico |
| Author_xml | – sequence: 1 givenname: Lucinda Elizabeth surname: Doyle fullname: Doyle, Lucinda Elizabeth organization: Singapore Centre for Environmental Life Sciences Engineering (SCELSE), Nanyang Technological University, 60 Nanyang Drive, SBS-01N-27, Singapore 637551, Singapore – sequence: 2 givenname: Enrico orcidid: 0000-0003-3150-1564 surname: Marsili fullname: Marsili, Enrico email: emarsili@ntu.edu.sg organization: Singapore Centre for Environmental Life Sciences Engineering (SCELSE), Nanyang Technological University, 60 Nanyang Drive, SBS-01N-27, Singapore 637551, Singapore |
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| Snippet | •Current methods for EAM enrichment have uncovered only a small part of EAM diversity.•Potentiostat-controlled electrochemical cells provide higher... Electrochemically-active microorganisms (EAM) are relevant to metal biogeochemistry and have applications in microbial fuel cells (MFCs), bioremediation, and... |
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| SubjectTerms | Bacteria - metabolism Bioelectric Energy Sources - microbiology biogeochemistry Bioreactors - microbiology bioremediation catalytic activity Culture Media Electrochemically-active bacteria electrochemistry Electrochemistry - methods Enrichment Geobacter inoculum metagenomics Microbial fuel cells Sediments Shewanella Waste Water - microbiology |
| Title | Methods for enrichment of novel electrochemically-active microorganisms |
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