Non-coding RNAs in hepatocellular carcinoma: molecular functions and pathological implications

Key Points Protein-coding sequence accounts for only 2% of the human genome, with the function of the remaining 98% of non-coding sequences in the human genome being largely elusive A large number of small and long non-coding RNAs (ncRNAs) have been identified, and deregulation of ncRNAs has a criti...

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Published inNature reviews. Gastroenterology & hepatology Vol. 15; no. 3; pp. 137 - 151
Main Authors Wong, Chun-Ming, Tsang, Felice Ho-Ching, Ng, Irene Oi-Lin
Format Journal Article
LanguageEnglish
Published London Nature Publishing Group UK 01.03.2018
Nature Publishing Group
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Abstract Key Points Protein-coding sequence accounts for only 2% of the human genome, with the function of the remaining 98% of non-coding sequences in the human genome being largely elusive A large number of small and long non-coding RNAs (ncRNAs) have been identified, and deregulation of ncRNAs has a critical role in liver carcinogenesis MicroRNAs negatively regulate gene expression at the post-transcriptional level; microRNAs can function as an 'oncomiRs' to repress tumour-suppressor genes or, vice versa, can act as a tumour suppressor to counteract oncogenes Long ncRNAs belong to functionally divergent groups of ncRNAs that regulate gene expression and other molecular functions through interacting with DNA, RNA and proteins Deregulation of ncRNAs profoundly contributes to liver carcinogenesis of diverse aetiologies, liver cancer stem cell formation, hepatocellular carcinoma epigenetic reprogramming and cancer metastasis Non-coding RNAs are potential molecular markers and therapeutic targets of human hepatocellular carcinoma A growing body of evidence implicates non-coding RNAs (ncRNAs) in liver carcinogenesis. In this Review, the authors summarize the pathological roles of ncRNAs in hepatocellular carcinoma and explore the potential applications of ncRNAs as diagnostic tools and therapeutic targets. Hepatocellular carcinoma (HCC) is a leading lethal malignancy worldwide. However, the molecular mechanisms underlying liver carcinogenesis remain poorly understood. Over the past two decades, overwhelming evidence has demonstrated the regulatory roles of different classes of non-coding RNAs (ncRNAs) in liver carcinogenesis related to a number of aetiologies, including HBV, HCV and NAFLD. Among the ncRNAs, microRNAs, which belong to a distinct class of small ncRNAs, have been proven to play a crucial role in the post-transcriptional regulation of gene expression. Deregulation of microRNAs has been broadly implicated in the inactivation of tumour-suppressor genes and activation of oncogenes in HCC. Modern high-throughput sequencing analyses have unprecedentedly identified a very large number of non-coding transcripts. Divergent groups of long ncRNAs have been implicated in liver carcinogenesis through interactions with DNA, RNA or proteins. Overall, ncRNAs represent a burgeoning field of cancer research, and we are only beginning to understand the importance and complicity of the ncRNAs in liver carcinogenesis. In this Review, we summarize the common deregulation of small and long ncRNAs in human HCC. We also comprehensively review the pathological roles of ncRNAs in liver carcinogenesis, epithelial-to-mesenchymal transition and HCC metastasis and discuss the potential applications of ncRNAs as diagnostic tools and therapeutic targets in human HCC.
AbstractList Hepatocellular carcinoma (HCC) is a leading lethal malignancy worldwide. However, the molecular mechanisms underlying liver carcinogenesis remain poorly understood. Over the past two decades, overwhelming evidence has demonstrated the regulatory roles of different classes of non-coding RNAs (ncRNAs) in liver carcinogenesis related to a number of aetiologies, including HBV, HCV and NAFLD. Among the ncRNAs, microRNAs, which belong to a distinct class of small ncRNAs, have been proven to play a crucial role in the post-transcriptional regulation of gene expression. Deregulation of microRNAs has been broadly implicated in the inactivation of tumour-suppressor genes and activation of oncogenes in HCC. Modern high-throughput sequencing analyses have unprecedentedly identified a very large number of non-coding transcripts. Divergent groups of long ncRNAs have been implicated in liver carcinogenesis through interactions with DNA, RNA or proteins. Overall, ncRNAs represent a burgeoning field of cancer research, and we are only beginning to understand the importance and complicity of the ncRNAs in liver carcinogenesis. In this Review, we summarize the common deregulation of small and long ncRNAs in human HCC. We also comprehensively review the pathological roles of ncRNAs in liver carcinogenesis, epithelial-to-mesenchymal transition and HCC metastasis and discuss the potential applications of ncRNAs as diagnostic tools and therapeutic targets in human HCC.
Hepatocellular carcinoma (HCC) is a leading lethal malignancy worldwide. However, the molecular mechanisms underlying liver carcinogenesis remain poorly understood. Over the past two decades, overwhelming evidence has demonstrated the regulatory roles of different classes of non-coding RNAs (ncRNAs) in liver carcinogenesis related to a number of aetiologies, including HBV, HCV and NAFLD. Among the ncRNAs, microRNAs, which belong to a distinct class of small ncRNAs, have been proven to play a crucial role in the post-transcriptional regulation of gene expression. Deregulation of microRNAs has been broadly implicated in the inactivation of tumour-suppressor genes and activation of oncogenes in HCC. Modern high-throughput sequencing analyses have unprecedentedly identified a very large number of non-coding transcripts. Divergent groups of long ncRNAs have been implicated in liver carcinogenesis through interactions with DNA, RNA or proteins. Overall, ncRNAs represent a burgeoning field of cancer research, and we are only beginning to understand the importance and complicity of the ncRNAs in liver carcinogenesis. In this Review, we summarize the common deregulation of small and long ncRNAs in human HCC. We also comprehensively review the pathological roles of ncRNAs in liver carcinogenesis, epithelial-to-mesenchymal transition and HCC metastasis and discuss the potential applications of ncRNAs as diagnostic tools and therapeutic targets in human HCC.Hepatocellular carcinoma (HCC) is a leading lethal malignancy worldwide. However, the molecular mechanisms underlying liver carcinogenesis remain poorly understood. Over the past two decades, overwhelming evidence has demonstrated the regulatory roles of different classes of non-coding RNAs (ncRNAs) in liver carcinogenesis related to a number of aetiologies, including HBV, HCV and NAFLD. Among the ncRNAs, microRNAs, which belong to a distinct class of small ncRNAs, have been proven to play a crucial role in the post-transcriptional regulation of gene expression. Deregulation of microRNAs has been broadly implicated in the inactivation of tumour-suppressor genes and activation of oncogenes in HCC. Modern high-throughput sequencing analyses have unprecedentedly identified a very large number of non-coding transcripts. Divergent groups of long ncRNAs have been implicated in liver carcinogenesis through interactions with DNA, RNA or proteins. Overall, ncRNAs represent a burgeoning field of cancer research, and we are only beginning to understand the importance and complicity of the ncRNAs in liver carcinogenesis. In this Review, we summarize the common deregulation of small and long ncRNAs in human HCC. We also comprehensively review the pathological roles of ncRNAs in liver carcinogenesis, epithelial-to-mesenchymal transition and HCC metastasis and discuss the potential applications of ncRNAs as diagnostic tools and therapeutic targets in human HCC.
Key Points Protein-coding sequence accounts for only 2% of the human genome, with the function of the remaining 98% of non-coding sequences in the human genome being largely elusive A large number of small and long non-coding RNAs (ncRNAs) have been identified, and deregulation of ncRNAs has a critical role in liver carcinogenesis MicroRNAs negatively regulate gene expression at the post-transcriptional level; microRNAs can function as an 'oncomiRs' to repress tumour-suppressor genes or, vice versa, can act as a tumour suppressor to counteract oncogenes Long ncRNAs belong to functionally divergent groups of ncRNAs that regulate gene expression and other molecular functions through interacting with DNA, RNA and proteins Deregulation of ncRNAs profoundly contributes to liver carcinogenesis of diverse aetiologies, liver cancer stem cell formation, hepatocellular carcinoma epigenetic reprogramming and cancer metastasis Non-coding RNAs are potential molecular markers and therapeutic targets of human hepatocellular carcinoma A growing body of evidence implicates non-coding RNAs (ncRNAs) in liver carcinogenesis. In this Review, the authors summarize the pathological roles of ncRNAs in hepatocellular carcinoma and explore the potential applications of ncRNAs as diagnostic tools and therapeutic targets. Hepatocellular carcinoma (HCC) is a leading lethal malignancy worldwide. However, the molecular mechanisms underlying liver carcinogenesis remain poorly understood. Over the past two decades, overwhelming evidence has demonstrated the regulatory roles of different classes of non-coding RNAs (ncRNAs) in liver carcinogenesis related to a number of aetiologies, including HBV, HCV and NAFLD. Among the ncRNAs, microRNAs, which belong to a distinct class of small ncRNAs, have been proven to play a crucial role in the post-transcriptional regulation of gene expression. Deregulation of microRNAs has been broadly implicated in the inactivation of tumour-suppressor genes and activation of oncogenes in HCC. Modern high-throughput sequencing analyses have unprecedentedly identified a very large number of non-coding transcripts. Divergent groups of long ncRNAs have been implicated in liver carcinogenesis through interactions with DNA, RNA or proteins. Overall, ncRNAs represent a burgeoning field of cancer research, and we are only beginning to understand the importance and complicity of the ncRNAs in liver carcinogenesis. In this Review, we summarize the common deregulation of small and long ncRNAs in human HCC. We also comprehensively review the pathological roles of ncRNAs in liver carcinogenesis, epithelial-to-mesenchymal transition and HCC metastasis and discuss the potential applications of ncRNAs as diagnostic tools and therapeutic targets in human HCC.
Audience Academic
Author Tsang, Felice Ho-Ching
Ng, Irene Oi-Lin
Wong, Chun-Ming
Author_xml – sequence: 1
  givenname: Chun-Ming
  surname: Wong
  fullname: Wong, Chun-Ming
  organization: Department of Pathology, The University of Hong Kong, Block T, Queen Mary Hospital, State Key Laboratory for Liver Research, The University of Hong Kong, Hong Kong Jockey Club Building for Interdisciplinary Research, Hong Kong
– sequence: 2
  givenname: Felice Ho-Ching
  surname: Tsang
  fullname: Tsang, Felice Ho-Ching
  organization: Department of Pathology, The University of Hong Kong, Block T, Queen Mary Hospital, State Key Laboratory for Liver Research, The University of Hong Kong, Hong Kong Jockey Club Building for Interdisciplinary Research, Hong Kong
– sequence: 3
  givenname: Irene Oi-Lin
  surname: Ng
  fullname: Ng, Irene Oi-Lin
  email: iolng@hku.hk
  organization: Department of Pathology, The University of Hong Kong, Block T, Queen Mary Hospital, State Key Laboratory for Liver Research, The University of Hong Kong, Hong Kong Jockey Club Building for Interdisciplinary Research, Hong Kong
BackLink https://www.ncbi.nlm.nih.gov/pubmed/29317776$$D View this record in MEDLINE/PubMed
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  doi: 10.1038/nrm3089
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  year: 2014
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  publication-title: Hepatology
  doi: 10.1002/hep.26712
– volume: 16
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  publication-title: Cancer Cell
  doi: 10.1016/j.ccr.2009.10.014
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Snippet Key Points Protein-coding sequence accounts for only 2% of the human genome, with the function of the remaining 98% of non-coding sequences in the human genome...
Hepatocellular carcinoma (HCC) is a leading lethal malignancy worldwide. However, the molecular mechanisms underlying liver carcinogenesis remain poorly...
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SubjectTerms 631/337/176
631/337/384
631/337/384/331
692/4020/4021/1607/1610
Biomedicine
Carcinogenesis
Care and treatment
Deoxyribonucleic acid
Development and progression
DNA
Gastroenterology
Gene expression
Gene regulation
Genetic aspects
Health aspects
Hepatocellular carcinoma
Hepatology
Hepatoma
Liver cancer
Malignancy
Medicine & Public Health
Mesenchyme
Metastases
MicroRNAs
miRNA
Molecular modelling
Next-generation sequencing
Oncogenes
Post-transcription
review-article
Therapeutic applications
Transcription activation
Tumors
Title Non-coding RNAs in hepatocellular carcinoma: molecular functions and pathological implications
URI https://link.springer.com/article/10.1038/nrgastro.2017.169
https://www.ncbi.nlm.nih.gov/pubmed/29317776
https://www.proquest.com/docview/2023384525
https://www.proquest.com/docview/1989555013
Volume 15
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