Plasma vesicle miRNAs for therapy response monitoring in Hodgkin lymphoma patients
Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of cancer patients. While the majority of plasma miRNA is bound to proteins, a smaller, less well-characterized pool is associated with extracellular vesicles (...
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Published in | JCI insight Vol. 1; no. 19; p. e89631 |
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Main Authors | , , , , , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
United States
American Society for Clinical Investigation
17.11.2016
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Subjects | |
Online Access | Get full text |
ISSN | 2379-3708 2379-3708 |
DOI | 10.1172/jci.insight.89631 |
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Abstract | Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of cancer patients. While the majority of plasma miRNA is bound to proteins, a smaller, less well-characterized pool is associated with extracellular vesicles (EVs). Here, we addressed whether EV-associated miRNAs reflect metabolic disease in classical Hodgkin lymphoma (cHL) patients.
With standardized size-exclusion chromatography (SEC), we isolated EV-associated extracellular RNA (exRNA) fractions and protein-bound miRNA from plasma of cHL patients and healthy subjects. We performed a comprehensive small RNA sequencing analysis and validation by TaqMan qRT-PCR for candidate discovery. Fluorodeoxyglucose-PET (FDG-PET) status before treatment, directly after treatment, and during long-term follow-up was compared directly with EV miRNA levels.
The plasma EV miRNA repertoire was more extensive compared with protein-bound miRNA that was heavily dominated by a few abundant miRNA species and was less informative of disease status. Purified EV fractions of untreated cHL patients and tumor EVs had enriched levels of miR24-3p, miR127-3p, miR21-5p, miR155-5p, and let7a-5p compared with EV fractions from healthy subjects and disease controls. Serial monitoring of EV miRNA levels in patients before treatment, directly after treatment, and during long-term follow-up revealed robust, stable decreases in miRNA levels matching a complete metabolic response, as observed with FDG-PET. Importantly, EV miRNA levels rose again in relapse patients.
We conclude that cHL-related miRNA levels in circulating EVs reflect the presence of vital tumor tissue and are suitable for therapy response and relapse monitoring in individual cHL patients.
Cancer Center Amsterdam Foundation (CCA-2013), Dutch Cancer Society (KWF-5510), Technology Foundation STW (STW Perspectief CANCER-ID). |
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AbstractList | Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of cancer patients. While the majority of plasma miRNA is bound to proteins, a smaller, less well-characterized pool is associated with extracellular vesicles (EVs). Here, we addressed whether EV-associated miRNAs reflect metabolic disease in classical Hodgkin lymphoma (cHL) patients.
With standardized size-exclusion chromatography (SEC), we isolated EV-associated extracellular RNA (exRNA) fractions and protein-bound miRNA from plasma of cHL patients and healthy subjects. We performed a comprehensive small RNA sequencing analysis and validation by TaqMan qRT-PCR for candidate discovery. Fluorodeoxyglucose-PET (FDG-PET) status before treatment, directly after treatment, and during long-term follow-up was compared directly with EV miRNA levels.
The plasma EV miRNA repertoire was more extensive compared with protein-bound miRNA that was heavily dominated by a few abundant miRNA species and was less informative of disease status. Purified EV fractions of untreated cHL patients and tumor EVs had enriched levels of miR24-3p, miR127-3p, miR21-5p, miR155-5p, and let7a-5p compared with EV fractions from healthy subjects and disease controls. Serial monitoring of EV miRNA levels in patients before treatment, directly after treatment, and during long-term follow-up revealed robust, stable decreases in miRNA levels matching a complete metabolic response, as observed with FDG-PET. Importantly, EV miRNA levels rose again in relapse patients.
We conclude that cHL-related miRNA levels in circulating EVs reflect the presence of vital tumor tissue and are suitable for therapy response and relapse monitoring in individual cHL patients.
Cancer Center Amsterdam Foundation (CCA-2013), Dutch Cancer Society (KWF-5510), Technology Foundation STW (STW Perspectief CANCER-ID). BACKGROUND. Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of cancer patients. While the majority of plasma miRNA is bound to proteins, a smaller, less well-characterized pool is associated with extracellular vesicles (EVs). Here, we addressed whether EV-associated miRNAs reflect metabolic disease in classical Hodgkin lymphoma (cHL) patients. METHODS. With standardized size-exclusion chromatography (SEC), we isolated EV-associated extracellular RNA (exRNA) fractions and protein-bound miRNA from plasma of cHL patients and healthy subjects. We performed a comprehensive small RNA sequencing analysis and validation by TaqMan qRT-PCR for candidate discovery. Fluorodeoxyglucose-PET (FDG-PET) status before treatment, directly after treatment, and during long-term follow-up was compared directly with EV miRNA levels. RESULTS. The plasma EV miRNA repertoire was more extensive compared with protein-bound miRNA that was heavily dominated by a few abundant miRNA species and was less informative of disease status. Purified EV fractions of untreated cHL patients and tumor EVs had enriched levels of miR24-3p, miR127-3p, miR21-5p, miR155-5p, and let7a-5p compared with EV fractions from healthy subjects and disease controls. Serial monitoring of EV miRNA levels in patients before treatment, directly after treatment, and during long-term follow-up revealed robust, stable decreases in miRNA levels matching a complete metabolic response, as observed with FDG-PET. Importantly, EV miRNA levels rose again in relapse patients. CONCLUSION. We conclude that cHL-related miRNA levels in circulating EVs reflect the presence of vital tumor tissue and are suitable for therapy response and relapse monitoring in individual cHL patients. FUNDING. Cancer Center Amsterdam Foundation (CCA-2013), Dutch Cancer Society (KWF-5510), Technology Foundation STW (STW Perspectief CANCER-ID).BACKGROUND. Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of cancer patients. While the majority of plasma miRNA is bound to proteins, a smaller, less well-characterized pool is associated with extracellular vesicles (EVs). Here, we addressed whether EV-associated miRNAs reflect metabolic disease in classical Hodgkin lymphoma (cHL) patients. METHODS. With standardized size-exclusion chromatography (SEC), we isolated EV-associated extracellular RNA (exRNA) fractions and protein-bound miRNA from plasma of cHL patients and healthy subjects. We performed a comprehensive small RNA sequencing analysis and validation by TaqMan qRT-PCR for candidate discovery. Fluorodeoxyglucose-PET (FDG-PET) status before treatment, directly after treatment, and during long-term follow-up was compared directly with EV miRNA levels. RESULTS. The plasma EV miRNA repertoire was more extensive compared with protein-bound miRNA that was heavily dominated by a few abundant miRNA species and was less informative of disease status. Purified EV fractions of untreated cHL patients and tumor EVs had enriched levels of miR24-3p, miR127-3p, miR21-5p, miR155-5p, and let7a-5p compared with EV fractions from healthy subjects and disease controls. Serial monitoring of EV miRNA levels in patients before treatment, directly after treatment, and during long-term follow-up revealed robust, stable decreases in miRNA levels matching a complete metabolic response, as observed with FDG-PET. Importantly, EV miRNA levels rose again in relapse patients. CONCLUSION. We conclude that cHL-related miRNA levels in circulating EVs reflect the presence of vital tumor tissue and are suitable for therapy response and relapse monitoring in individual cHL patients. FUNDING. Cancer Center Amsterdam Foundation (CCA-2013), Dutch Cancer Society (KWF-5510), Technology Foundation STW (STW Perspectief CANCER-ID). BACKGROUND. Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of cancer patients. While the majority of plasma miRNA is bound to proteins, a smaller, less well-characterized pool is associated with extracellular vesicles (EVs). Here, we addressed whether EV-associated miRNAs reflect metabolic disease in classical Hodgkin lymphoma (cHL) patients. METHODS. With standardized size-exclusion chromatography (SEC), we isolated EV-associated extracellular RNA (exRNA) fractions and protein-bound miRNA from plasma of cHL patients and healthy subjects. We performed a comprehensive small RNA sequencing analysis and validation by TaqMan qRT-PCR for candidate discovery. Fluorodeoxyglucose-PET (FDG-PET) status before treatment, directly after treatment, and during long-term follow-up was compared directly with EV miRNA levels. RESULTS. The plasma EV miRNA repertoire was more extensive compared with protein-bound miRNA that was heavily dominated by a few abundant miRNA species and was less informative of disease status. Purified EV fractions of untreated cHL patients and tumor EVs had enriched levels of miR24-3p, miR127-3p, miR21-5p, miR155-5p, and let7a-5p compared with EV fractions from healthy subjects and disease controls. Serial monitoring of EV miRNA levels in patients before treatment, directly after treatment, and during long-term follow-up revealed robust, stable decreases in miRNA levels matching a complete metabolic response, as observed with FDG-PET. Importantly, EV miRNA levels rose again in relapse patients. CONCLUSION. We conclude that cHL-related miRNA levels in circulating EVs reflect the presence of vital tumor tissue and are suitable for therapy response and relapse monitoring in individual cHL patients. FUNDING. Cancer Center Amsterdam Foundation (CCA-2013), Dutch Cancer Society (KWF-5510), Technology Foundation STW (STW Perspectief CANCER-ID). The extracellular RNA repertoire in circulating extracellular vesicles is useful indicator of therapy response and relapse in classical Hodgkin lymphoma patients. |
Author | Baglio, S. Rubina van den Berg, Anke van Eijndhoven, Monique A.J. Koppers-Lalic, Danijela van der Voorn, Hans Zijlstra, Josée M. van Weering, Jan R.T. van Niele, Stuart Visser, Lydia Groenewegen, Nils J. Nieuwland, Rienk Drees, Esther E.E. Pegtel, D. Michiel Libregts, Sten F.W.M. Wauben, Marca H.M. de Menezes, Renee X. de Jong, Daphne |
AuthorAffiliation | 7 Department of Clinical Chemistry, Academic Medical Center, Amsterdam, Netherlands 2 Department of Hematology, VU University Medical Center, Amsterdam, Netherlands 8 Department of Pathology and Medical Biology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands 4 Department of Biochemistry and Cell Biology, Utrecht University, Utrecht, Netherlands 5 Department of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, Netherlands 9 Department of Pathology, Exosomes Research Group, VU University Medical Center, Amsterdam, Netherlands; ExBiome BV, Amsterdam, Netherlands 3 iZON Science, Oxford, United Kingdom 1 Department of Pathology, Exosomes Research Group, and 6 Department of Functional Genomics, Center for Neurogenomics and Cognitive Research, Neuroscience Campus Amsterdam, VU University, Amsterdam, Netherlands |
AuthorAffiliation_xml | – name: 3 iZON Science, Oxford, United Kingdom – name: 5 Department of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, Netherlands – name: 4 Department of Biochemistry and Cell Biology, Utrecht University, Utrecht, Netherlands – name: 6 Department of Functional Genomics, Center for Neurogenomics and Cognitive Research, Neuroscience Campus Amsterdam, VU University, Amsterdam, Netherlands – name: 1 Department of Pathology, Exosomes Research Group, and – name: 8 Department of Pathology and Medical Biology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands – name: 9 Department of Pathology, Exosomes Research Group, VU University Medical Center, Amsterdam, Netherlands; ExBiome BV, Amsterdam, Netherlands – name: 2 Department of Hematology, VU University Medical Center, Amsterdam, Netherlands – name: 7 Department of Clinical Chemistry, Academic Medical Center, Amsterdam, Netherlands |
Author_xml | – sequence: 1 givenname: Monique A.J. surname: van Eijndhoven fullname: van Eijndhoven, Monique A.J. – sequence: 2 givenname: Josée M. surname: Zijlstra fullname: Zijlstra, Josée M. – sequence: 3 givenname: Nils J. surname: Groenewegen fullname: Groenewegen, Nils J. – sequence: 4 givenname: Esther E.E. surname: Drees fullname: Drees, Esther E.E. – sequence: 5 givenname: Stuart surname: van Niele fullname: van Niele, Stuart – sequence: 6 givenname: S. Rubina surname: Baglio fullname: Baglio, S. Rubina – sequence: 7 givenname: Danijela surname: Koppers-Lalic fullname: Koppers-Lalic, Danijela – sequence: 8 givenname: Hans surname: van der Voorn fullname: van der Voorn, Hans – sequence: 9 givenname: Sten F.W.M. surname: Libregts fullname: Libregts, Sten F.W.M. – sequence: 10 givenname: Marca H.M. surname: Wauben fullname: Wauben, Marca H.M. – sequence: 11 givenname: Renee X. surname: de Menezes fullname: de Menezes, Renee X. – sequence: 12 givenname: Jan R.T. surname: van Weering fullname: van Weering, Jan R.T. – sequence: 13 givenname: Rienk surname: Nieuwland fullname: Nieuwland, Rienk – sequence: 14 givenname: Lydia surname: Visser fullname: Visser, Lydia – sequence: 15 givenname: Anke surname: van den Berg fullname: van den Berg, Anke – sequence: 16 givenname: Daphne surname: de Jong fullname: de Jong, Daphne – sequence: 17 givenname: D. Michiel surname: Pegtel fullname: Pegtel, D. Michiel |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/27882350$$D View this record in MEDLINE/PubMed |
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Snippet | Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of cancer patients.... BACKGROUND. Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of... BACKGROUND. Cell-free circulating nucleic acids, including 22-nt microRNAs (miRNAs), represent noninvasive biomarkers for treatment response monitoring of... |
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SubjectTerms | Biomarkers, Tumor - blood Case-Control Studies Clinical Medicine Extracellular Vesicles Hodgkin Disease - blood Hodgkin Disease - therapy Humans MicroRNAs - blood Neoplasm Recurrence, Local |
Title | Plasma vesicle miRNAs for therapy response monitoring in Hodgkin lymphoma patients |
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