Multiple transatlantic incursions of highly pathogenic avian influenza clade 2.3.4.4b A(H5N5) virus into North America and spillover to mammals
Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a transatlantic incursion of HPAI A(H5N5) viruses into North America was detected, followed shortly thereafter by a mammalian detection. As these A(H5N5)...
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Published in | Cell reports (Cambridge) Vol. 43; no. 7; p. 114479 |
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Main Authors | , , , , , , , , , , , , , , , , , , , , , , , |
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Language | English |
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Elsevier Inc
23.07.2024
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Abstract | Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a transatlantic incursion of HPAI A(H5N5) viruses into North America was detected, followed shortly thereafter by a mammalian detection. As these A(H5N5) viruses were similar to contemporary viruses described in Eurasia, the transatlantic spread of A(H5N5) viruses was most likely facilitated by pelagic seabirds. Some of the Canadian A(H5N5) viruses from birds and mammals possessed the PB2-E627K substitution known to facilitate adaptation to mammals. Ferrets inoculated with A(H5N5) viruses showed rapid, severe disease onset, with some evidence of direct contact transmission. However, these viruses have maintained receptor binding traits of avian influenza viruses and were susceptible to oseltamivir and zanamivir. Understanding the factors influencing the virulence and transmission of A(H5N5) in migratory birds and mammals is critical to minimize impacts on wildlife and public health.
[Display omitted]
•Seabirds likely enabled multiple incursions of A(H5N5) virus from Europe to Canada•Some A(H5N5) viruses possessed the mammalian adaptation marker PB2-E627K•A(H5N5) viruses demonstrated rapid 100% mortality and some transmission in ferrets•A(H5N5) viruses preferred avian virus receptors and are sensitive to NA inhibitors
Erdelyan et al. reveal that seabirds likely facilitated the spread of A(H5N5) viruses from Europe to Canada. All viral segments were Eurasian. Hemagglutinin contained substitutions not present in Canadian A(H5N1) viruses. These viruses remain susceptible to neuraminidase inhibitors. In ferrets, the virus caused rapid mortality, with some transmission to contacts. |
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AbstractList | Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a transatlantic incursion of HPAI A(H5N5) viruses into North America was detected, followed shortly thereafter by a mammalian detection. As these A(H5N5) viruses were similar to contemporary viruses described in Eurasia, the transatlantic spread of A(H5N5) viruses was most likely facilitated by pelagic seabirds. Some of the Canadian A(H5N5) viruses from birds and mammals possessed the PB2-E627K substitution known to facilitate adaptation to mammals. Ferrets inoculated with A(H5N5) viruses showed rapid, severe disease onset, with some evidence of direct contact transmission. However, these viruses have maintained receptor binding traits of avian influenza viruses and were susceptible to oseltamivir and zanamivir. Understanding the factors influencing the virulence and transmission of A(H5N5) in migratory birds and mammals is critical to minimize impacts on wildlife and public health.Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a transatlantic incursion of HPAI A(H5N5) viruses into North America was detected, followed shortly thereafter by a mammalian detection. As these A(H5N5) viruses were similar to contemporary viruses described in Eurasia, the transatlantic spread of A(H5N5) viruses was most likely facilitated by pelagic seabirds. Some of the Canadian A(H5N5) viruses from birds and mammals possessed the PB2-E627K substitution known to facilitate adaptation to mammals. Ferrets inoculated with A(H5N5) viruses showed rapid, severe disease onset, with some evidence of direct contact transmission. However, these viruses have maintained receptor binding traits of avian influenza viruses and were susceptible to oseltamivir and zanamivir. Understanding the factors influencing the virulence and transmission of A(H5N5) in migratory birds and mammals is critical to minimize impacts on wildlife and public health. Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a transatlantic incursion of HPAI A(H5N5) viruses into North America was detected, followed shortly thereafter by a mammalian detection. As these A(H5N5) viruses were similar to contemporary viruses described in Eurasia, the transatlantic spread of A(H5N5) viruses was most likely facilitated by pelagic seabirds. Some of the Canadian A(H5N5) viruses from birds and mammals possessed the PB2-E627K substitution known to facilitate adaptation to mammals. Ferrets inoculated with A(H5N5) viruses showed rapid, severe disease onset, with some evidence of direct contact transmission. However, these viruses have maintained receptor binding traits of avian influenza viruses and were susceptible to oseltamivir and zanamivir. Understanding the factors influencing the virulence and transmission of A(H5N5) in migratory birds and mammals is critical to minimize impacts on wildlife and public health. Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a transatlantic incursion of HPAI A(H5N5) viruses into North America was detected, followed shortly thereafter by a mammalian detection. As these A(H5N5) viruses were similar to contemporary viruses described in Eurasia, the transatlantic spread of A(H5N5) viruses was most likely facilitated by pelagic seabirds. Some of the Canadian A(H5N5) viruses from birds and mammals possessed the PB2-E627K substitution known to facilitate adaptation to mammals. Ferrets inoculated with A(H5N5) viruses showed rapid, severe disease onset, with some evidence of direct contact transmission. However, these viruses have maintained receptor binding traits of avian influenza viruses and were susceptible to oseltamivir and zanamivir. Understanding the factors influencing the virulence and transmission of A(H5N5) in migratory birds and mammals is critical to minimize impacts on wildlife and public health. [Display omitted] •Seabirds likely enabled multiple incursions of A(H5N5) virus from Europe to Canada•Some A(H5N5) viruses possessed the mammalian adaptation marker PB2-E627K•A(H5N5) viruses demonstrated rapid 100% mortality and some transmission in ferrets•A(H5N5) viruses preferred avian virus receptors and are sensitive to NA inhibitors Erdelyan et al. reveal that seabirds likely facilitated the spread of A(H5N5) viruses from Europe to Canada. All viral segments were Eurasian. Hemagglutinin contained substitutions not present in Canadian A(H5N1) viruses. These viruses remain susceptible to neuraminidase inhibitors. In ferrets, the virus caused rapid mortality, with some transmission to contacts. Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a transatlantic incursion of HPAI A(H5N5) viruses into North America was detected, followed shortly thereafter by a mammalian detection. As these A(H5N5) viruses were similar to contemporary viruses described in Eurasia, the transatlantic spread of A(H5N5) viruses was most likely facilitated by pelagic seabirds. Some of the Canadian A(H5N5) viruses from birds and mammals possessed the PB2-E627K substitution known to facilitate adaptation to mammals. Ferrets inoculated with A(H5N5) viruses showed rapid, severe disease onset, with some evidence of direct contact transmission. However, these viruses have maintained receptor binding traits of avian influenza viruses and were susceptible to oseltamivir and zanamivir. Understanding the factors influencing the virulence and transmission of A(H5N5) in migratory birds and mammals is critical to minimize impacts on wildlife and public health. Erdelyan et al. reveal that seabirds likely facilitated the spread of A(H5N5) viruses from Europe to Canada. All viral segments were Eurasian. Hemagglutinin contained substitutions not present in Canadian A(H5N1) viruses. These viruses remain susceptible to neuraminidase inhibitors. In ferrets, the virus caused rapid mortality, with some transmission to contacts. |
ArticleNumber | 114479 |
Author | Andreev, Konstantin Hisanaga, Tamiko Jones, Megan E.B. Webby, Richard J. Signore, Anthony V. Vogel, Peter Lung, Oliver Jeevan, Trushar Erdelyan, Cassidy N.G. Franks, John Mubareka, Samira Jones, Jeremy C. Bøe, Cathrine Arnason Gjerset, Britt Alkie, Tamiru N. Ayilara, Ifeoluwa Miller, Lance Kandeil, Ahmed Sullivan, Daniel Yason, Carmencita Pama, Lemarie Berhane, Yohannes Bourque, Laura Seiler, Jon P. |
AuthorAffiliation | 10 Department of Laboratory Medicine and Pathobiology, Temerty Faculty of Medicine, University of Toronto, Toronto, ON M5S 1A1, Canada 7 Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, PEI C1A 4P3, Canada 13 Department of Veterinary Pathology, Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, SK S7N 5B4, Canada 11 Department of Microbiology, Immunology, and Biochemistry, University of Tennessee Health Science Center, Memphis, TN 38105, USA 9 Sunnybrook Research Institute, Toronto, ON M4N 3M5, Canada 4 Canadian Wildlife Health Cooperative, Atlantic Region, Charlottetown, PEI C1A 4P3, Canada 5 Comparative Pathology Core, St. Jude Children’s Research Hospital, Memphis, TN 38105, USA 15 Lead contact 3 Center of Scientific Excellence for Influenza Viruses, National Research Centre, Giza, 12622, Egypt 1 National Centre for Foreign Animal Disease, Winnipeg, MB R3E 3M4, Canada 12 Department of Animal Science, University of Manitoba, Winnipeg, |
AuthorAffiliation_xml | – name: 1 National Centre for Foreign Animal Disease, Winnipeg, MB R3E 3M4, Canada – name: 6 Norwegian Veterinary Institute, 1433 Ås, Norway – name: 4 Canadian Wildlife Health Cooperative, Atlantic Region, Charlottetown, PEI C1A 4P3, Canada – name: 7 Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, PEI C1A 4P3, Canada – name: 15 Lead contact – name: 13 Department of Veterinary Pathology, Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, SK S7N 5B4, Canada – name: 12 Department of Animal Science, University of Manitoba, Winnipeg, MB R3T 2N2, Canada – name: 5 Comparative Pathology Core, St. Jude Children’s Research Hospital, Memphis, TN 38105, USA – name: 10 Department of Laboratory Medicine and Pathobiology, Temerty Faculty of Medicine, University of Toronto, Toronto, ON M5S 1A1, Canada – name: 9 Sunnybrook Research Institute, Toronto, ON M4N 3M5, Canada – name: 14 These authors contributed equally – name: 11 Department of Microbiology, Immunology, and Biochemistry, University of Tennessee Health Science Center, Memphis, TN 38105, USA – name: 2 Department of Pathology and Host-Microbe Interactions, St. Jude Children’s Research Hospital, Memphis, TN 38105, USA – name: 3 Center of Scientific Excellence for Influenza Viruses, National Research Centre, Giza, 12622, Egypt – name: 8 Department of Biological Sciences, University of Manitoba, Winnipeg, MB R3T 2M5, Canada |
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Cites_doi | 10.3201/eid2107.150403 10.3389/fvets.2018.00084 10.1371/journal.pcbi.1000520 10.1371/journal.ppat.1000709 10.1371/journal.pone.0092075 10.3201/eid2812.221086 10.1093/ve/veae027 10.1128/JVI.00110-06 10.1016/j.virol.2012.09.016 10.3390/v13050886 10.1126/science.aaf8852 10.1128/JVI.00221-10 10.1093/sysbio/syy032 10.3201/eid2909.230067 10.1007/s11033-022-07359-4 10.1111/j.1472-4642.2011.00864.x 10.1080/22221751.2022.2043729 10.1128/JVI.02687-12 10.1128/JVI.02118-09 10.1128/JVI.00776-13 10.1093/bioinformatics/bty191 10.3201/eid2904.221538 10.1016/j.virol.2014.04.009 10.1371/journal.pone.0071401 10.1111/mms.12773 10.1038/s41467-023-38415-7 10.1093/molbev/msw082 10.1126/science.1122438 10.1016/j.ijid.2023.04.403 10.1038/s41598-017-16936-8 10.1016/j.meegid.2017.05.001 10.1186/s12917-020-2265-2 10.1038/s41598-018-27890-4 10.1093/ve/veac077 10.1016/j.vetmic.2018.03.018 10.1128/jvi.51.3.863-865.1984 10.1038/nmeth.4285 10.1111/2041-210X.12628 10.1073/pnas.1522921113 10.1038/s41598-022-13447-z 10.1016/j.virol.2023.109860 10.1128/mbio.00609-22 10.1128/JVI.01522-07 10.3201/eid1209.060430 10.1093/infdis/jiad418 10.1007/s00705-010-0839-1 10.1093/ve/veac035 10.1093/ve/vex042 10.1016/j.virol.2018.09.024 10.1128/JCM.40.9.3256-3260.2002 10.1093/molbev/msu300 10.1038/emi.2016.77 10.3390/v11060501 10.1371/journal.pone.0006277 10.1073/pnas.0504662102 10.1126/science.1115273 10.1093/molbev/mst010 10.1080/22221751.2023.2186608 10.3390/v14091849 10.1093/molbev/msj021 10.1186/s12862-019-1431-2 10.1111/mec.16738 10.1093/ve/veaa087 10.1111/irv.12324 10.1128/JVI.74.13.6015-6020.2000 10.1016/j.onehlt.2023.100511 10.1016/j.vetmic.2019.06.005 10.1080/21505594.2022.2082672 10.1093/jtm/taad032 10.1016/j.antiviral.2022.105457 10.3201/eid2304.161949 10.1371/journal.pgen.1004037 10.1128/JVI.01460-10 10.1111/conl.12824 10.1111/irv.13118 10.1038/nature03974 10.3390/v11040346 10.3791/55570 10.3201/eid1211.060223 10.3201/eid1305.070013 10.1128/JVI.02749-12 10.1080/22221751.2022.2155072 10.1006/viro.1999.9820 10.1038/s41586-023-06631-2 10.1128/JVI.00967-13 10.1021/bi972217k 10.1093/bioinformatics/btu393 10.1038/srep09484 10.1128/JVI.01987-08 10.1186/s13567-017-0410-0 10.3201/eid2105.141927 10.1155/2023/8855164 10.1038/srep13493 10.1016/j.meegid.2014.09.013 10.1111/j.1865-1682.2010.01175.x 10.1016/0042-6822(88)90260-7 10.3390/v14122725 |
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Keywords | HPAI contact transmission avian influenza wildlife transmission CP: Microbiology A(H5N5) antiviral susceptibility Sable Island clade 2.3.4.4b ferret model |
Language | English |
License | This is an open access article under the CC BY license. Crown Copyright © 2024. Published by Elsevier Inc. All rights reserved. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
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Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 AUTHOR CONTRIBUTIONS Conceptualization, C.N.G.E., A.K., R.J.W., and Y.B. Formal analysis, C.N.G.E., A.K., A.V.S., and P.V. Investigation, A.K., T.N.A., P.V., I.A., L.P., K.A., T.J., J.F., J.C.J., L.M., C.A.B., B.J., T.H., and D.S. Visualization, C.N.G.E., A.K., A.V.S., and P.V. Writing – original draft, C.N.G.E. and A.K. Writing – review & editing, C.N.G.E., A.K., A.V.S., T.N.A., R.J.W., and Y.B. Funding acquisition, S.M., R.J.W., and Y.B. Resources, M.E.B.J., C.A.B., B.G., and C.Y. Supervision, T.H., O.L., R.J.W., and Y.B. |
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References | Xu, Subbarao, Cox, Guo (bib10) 1999; 261 Ince, Gueye-Mbaye, Bennink, Yewdell (bib8) 2013; 87 Pohlmann, Starick, Grund, Höper, Strebelow, Globig, Staubach, Conraths, Mettenleiter, Harder, Beer (bib24) 2018; 8 Alkie, Lopes, Hisanaga, Xu, Suderman, Koziuk, Fisher, Redford, Lung, Joseph (bib33) 2022; 8 Marchenko, Goncharova, Susloparov, Kolosova, Gudymo, Svyatchenko, Danilenko, Durymanov, Gavrilova, Maksyutov, Ryzhikov (bib63) 2018; 525 Gubareva, Mishin, Patel, Chesnokov, Nguyen, De La Cruz, Spencer, Campbell, Sinner, Reid (bib115) 2019; 24 Hinshaw, Bean, Webster, Rehg, Fiorelli, Early, Geraci, St Aubin (bib89) 1984; 51 Alkie, Cox, Embury-Hyatt, Stevens, Pople, Pybus, Xu, Hisanaga, Suderman, Koziuk (bib94) 2023; 12 Zinyakov, Andriyasov, Zhestkov, Kozlov, Nikonova, Ovchinnikova, Grekhneva, Shcherbakova, Andreychuk, Sprygin (bib41) 2022; 14 Liu, Xiao, Lei, Zhu, Qin, Zhang, Zhang, Zhao, Wang, Feng (bib12) 2005; 309 Davies, Carneiro, Tarzia, Wakefield, Hennicke, Frederiksen, Hansen, Campos, Hazin, Lascelles (bib53) 2021; 14 Kosik, Yewdell (bib1) 2019; 11 Bruno, Alfaro-Núñez, de Mora, Armas, Olmedo, Garcés, Muñoz-López, Garcia-Bereguiain (bib27) 2023; 30 Dusek, Hallgrimsson, Ip, Jónsson, Sreevatsan, Nashold, TeSlaa, Enomoto, Halpin, Lin (bib42) 2014; 9 Gilbert, Xiao, Domenech, Lubroth, Martin, Slingenbergh (bib4) 2006; 12 Martin, Varsani, Roumagnac, Botha, Maslamoney, Schwab, Kelz, Kumar, Murrell (bib102) 2021; 7 Park, Il Kim, Lee, Bae, Yoo, Nam, Kim, Sook Park, Song, Song (bib75) 2017; 7 Leang, Hurt (bib51) 2017 King, Harder, Globig, Stacker, Günther, Grund, Beer, Pohlmann (bib66) 2022; 8 Youk, Torchetti, Lantz, Lenoch, Killian, Leyson, Bevins, Dilione, Ip, Stallknecht (bib100) 2023; 587 Lemey, Rambaut, Drummond, Suchard (bib107) 2009; 5 Organization (bib26) 2023 Adlhoch, Fusaro, Gonzales, Kuiken, Marangon, Niqueux, Staubach (bib48) 2022; 20 Hall, Hallgrimsson, Suwannanarn, Sreevatsen, Ip, Magnusdottir, TeSlaa, Nashold, Dusek (bib43) 2014; 28 Günther, Krone, Svansson, Pohlmann, King, Hallgrimsson, Skarphéðinsson, Sigurðardóttir, Jónsson, Beer (bib44) 2022; 28 Nguyen, Schmidt, von Haeseler, Minh (bib104) 2015; 32 Sagulenko, Puller, Neher (bib105) 2018; 4 Ma, Hill, Zabilansky, Yuan, Runstadler (bib88) 2016; 113 Mellquist, Kasturi, Spitalnik, Shakin-Eshleman (bib77) 1998; 37 Salzberg, Kingsford, Cattoli, Spiro, Janies, Aly, Brown, Couacy-Hymann, De Mia, Dung (bib18) 2007; 13 Xie, Edwards, Wille, Wei, Wong, Zanin, El-Shesheny, Ducatez, Poon, Kayali (bib25) 2023; 622 Blumenkrantz, Roberts, Shelton, Lycett, Barclay (bib74) 2013; 87 Gass, Dusek, Hall, Hallgrimsson, Halldórsson, Vignisson, Ragnarsdottir, Jónsson, Krauss, Wong (bib45) 2023; 32 Puryear, Keogh, Hill, Moxley, Josephson, Davis, Bandoro, Lidgard, Bogomolni, Levin (bib59) 2016; 5 Chen, Smith, Zhang, Qin, Wang, Li, Webster, Peiris, Guan (bib13) 2005; 436 Makalo, Dundon, Settypalli, Datta, Lamien, Cattoli, Phalatsi, Lepheana, Matlali, Mahloane (bib84) 2022; 11 Wang, Lu, Zhou, Suguitan, Cheng, Subbarao, Kemble, Jin (bib78) 2010; 84 Chen, Li, Li, Shi, Shinya, Deng, Qi, Tian, Fan, Zhao (bib14) 2006; 80 H5N8, Viruses (bib16) 2016; 354 Li, Gu, Liu, Gao, Sun, Liu, Jiang, Zhong, Wang, Hu (bib83) 2020; 67 Spackman, Senne, Myers, Bulaga, Garber, Perdue, Lohman, Daum, Suarez (bib97) 2002; 40 Fusaro, Zecchin, Giussani, Palumbo, Agüero-García, Bachofen, Bálint, Banihashem, Banyard, Beerens (bib85) 2024; 10 Gu, Gu, Eils, Schlesner, Brors (bib113) 2014; 30 Lee, Jaspers, Gabrielsen, Jenssen, Ciesielski, Mortensen, Lundgren, Waugh (bib47) 2020; 16 Katoh, Standley (bib101) 2013; 30 Puryear, Sawatzki, Hill, Foss, Stone, Doughty, Walk, Gilbert, Murray, Cox (bib31) 2023; 29 Lee, Criado, Swayne (bib17) 2021; 11 Health (bib56) 2023 Weingartl, Berhane, Hisanaga, Neufeld, Kehler, Emburry-Hyatt, Hooper-McGreevy, Kasloff, Dalman, Bystrom (bib96) 2010; 84 Deng, Tan, Shi, Cui, Jiang, Liu, Tian, Kawaoka, Li, Chen (bib6) 2013; 87 King, Staubach, Lüder, Koethe, Günther, Stacker, Rubbenstroth, Dietze, Grund, Conraths (bib62) 2022; 14 Marathe, Lévêque, Klumpp, Webster, Govorkova (bib114) 2013; 8 Bielejec, Baele, Vrancken, Suchard, Rambaut, Lemey (bib111) 2016; 33 Webster, Bean, Gorman, Chambers, Kawaoka (bib3) 1992; 56 (bib61) 2023; 2017 Gao, Zhang, Shinya, Deng, Jiang, Li, Guan, Tian, Li, Shi (bib87) 2009; 5 Gu, Li, Gao, He, Xu, Xu, Xu, Wang, Hu, Liu (bib92) 2017; 48 de Vries, Guo, Dai, Rottier, van Kuppeveld, de Haan (bib22) 2015; 21 Chen, Quan, Wang, Du, Qin, Peng, Liu (bib73) 2020; 11 (bib60) 2023; 2017 Hall, Dusek, Spackman (bib23) 2015; 21 Capua, Marangon (bib37) 2006; 12 Kandeil, Patton, Jones, Jeevan, Harrington, Trifkovic, Seiler, Fabrizio, Woodard, Turner (bib93) 2023; 14 Smith, Donis (bib21) 2015; 9 Kalyaanamoorthy, Minh, Wong, von Haeseler, Jermiin (bib103) 2017; 14 Frederiksen, Moe, Daunt, Phillips, Barrett, Bogdanova, Boulinier, Chardine, Chastel, Chivers (bib54) 2012; 18 Wang, Zou, Yang, Guo, Hua, Zhang, Zhao, Jin (bib90) 2012; 86 Liang, Nissen, Krog, Breum, Trebbien, Larsen, Hjulsager (bib65) 2021; 13 Bergervoet, Ho, Heutink, Bossers, Beerens (bib64) 2019; 11 Kode, Pawar, Tare, Keng, Hurt, Mullick (bib49) 2019; 235 Matsuoka, Swayne, Thomas, Rameix-Welti, Naffakh, Warnes, Altholtz, Donis, Subbarao (bib71) 2009; 83 Zhao, Shortridge, Garcia, Guan, Wan (bib11) 2008; 89 Shi, Zeng, Cui, Yan, Chen (bib30) 2023; 12 Huang, Wille, Benkaroun, Munro, Bond, Fifield, Robertson, Ojkic, Whitney, Lang (bib55) 2014; 456–457 Pasick, Berhane, Joseph, Bowes, Hisanaga, Handel, Alexandersen (bib19) 2015; 5 Andreev, Jones, Seiler, Kandeil, Turner, Barman, Rubrum, Webby, Govorkova (bib95) 2024; 229 Kim, Park, Kwon, Kim, Si, Jeong, Lee, Nguyen, Kwon, Choi (bib39) 2017; 53 Dhingra, Artois, Dellicour, Lemey, Dauphin, Von Dobschuetz, Van Boeckel, Castellan, Morzaria, Gilbert (bib2) 2018; 5 Wille, Robertson, Whitney, Ojkic, Lang (bib57) 2011; 156 Sorrell, Song, Pena, Perez (bib68) 2010; 84 Li, Zu Dohna, Cardona, Miller, Carpenter (bib67) 2011; 6 Kawaoka, Chambers, Sladen, Webster (bib5) 1988; 163 Shapiro, Rambaut, Drummond (bib109) 2006; 23 Wille, Klaassen (bib35) 2023; 17 Omoto, Speranzini, Hashimoto, Noshi, Yamaguchi, Kawai, Kawaguchi, Uehara, Shishido, Naito, Cusack (bib50) 2018; 8 Beato, Mancin, Yang, Buratin, Ruffa, Maniero, Fusaro, Terregino, Wan, Capua (bib80) 2013; 435 Reid, Shell, Barboi, Onita, Turcitu, Cioranu, Marinova-Petkova, Goujgoulova, Webby, Webster (bib20) 2011; 58 Hulse-Post, Sturm-Ramirez, Humberd, Seiler, Govorkova, Krauss, Scholtissek, Puthavathana, Buranathai, Nguyen (bib9) 2005; 102 den Heyer, Bowen, Dale, Gosselin, Hammill, Johnston, Lang, Murray, Stenson, Wood (bib58) 2021; 37 Gao, Gu, Liu, Li, Li, Shi, Li, Wang, Hu, Liu (bib76) 2018; 217 Herfst, Schrauwen, Linster, Chutinimitkul, de Wit, Munster, Sorrell, Bestebroer, Burke, Smith (bib91) 2012; 336 Zhou, Yu, Hu, Tu, Zou, Peng, Zhu, Li, Zhang, Yu (bib69) 2009; 4 Sun, Zhang, Zhao, Qian, Jiang, Jia, Xu, Yang, Feng (bib29) 2023; 16 Li, Chen, Zhang, Fu, Zhang, Shi, Zhu, Gu, Peng, Liu (bib70) 2014; 9 Li (bib98) 2018; 34 Ariyama, Pardo-Roa, Muñoz, Aguayo, Ávila, Mathieu, Almonacid, Medina, Brito, Johow, Neira (bib36) 2023; 29 Yu, Smith, Zhu, Guan, Lam (bib106) 2017; 8 Olsen, Munster, Wallensten, Waldenström, Osterhaus, Fouchier (bib15) 2006; 312 Caliendo, Lewis, Pohlmann, Baillie, Banyard, Beer, Brown, Fouchier, Hansen, Lameris (bib32) 2022; 12 Bruno, Alfaro-Núñez, de Mora, Armas, Olmedo, Garcés, Vaca, De la Torre, Jarrin, Burbano (bib34) 2023; 133 Stech, Veits, Abdelwhab, Wessels, Mettenleiter, Stech (bib72) 2015; 5 Shu, McCauley (bib99) 2017; 22 Pandey, Sharma, Prajapati, Mohanta, Mishra (bib81) 2022; 49 Kaverin, Rudneva, Govorkova, Timofeeva, Shilov, Kochergin-Nikitsky, Krylov, Webster (bib79) 2007; 81 Antigua, Baek, Choi, Jeong, Kim, Oh, Yoon, Kim, Kim, Choi (bib82) 2022; 13 Patel, Flanigan, Feng, Chesnokov, Nguyen, Elal, Steel, Kondor, Wentworth, Gubareva, Mishin (bib52) 2022; 208 Rambaut, Drummond, Xie, Baele, Suchard (bib110) 2018; 67 Neverov, Lezhnina, Kondrashov, Bazykin (bib7) 2014; 10 Mitnaul, Matrosovich, Castrucci, Tuzikov, Bovin, Kobasa, Kawaoka (bib86) 2000; 74 Pohlmann, Starick, Harder, Grund, Höper, Globig, Staubach, Dietze, Strebelow, Ulrich (bib38) 2017; 23 Demirev, Park, Lee, Park, Bae, Park, Kim (bib40) 2023; 2023 Hartby, Krog, Merkel, Holm, Larsen, Hjulsager (bib46) 2015; 302–310 Suchard, Lemey, Baele, Ayres, Drummond, Rambaut (bib108) 2018; 4 Hicks, Dimitrov, Afonso, Ramey, Bahl (bib112) 2019; 19 Pohlmann, King, Fusaro, Zecchin, Banyard, Brown, Byrne, Beerens, Liang, Heutink (bib28) 2022; 13 (10.1016/j.celrep.2024.114479_bib61) 2023; 2017 Marchenko (10.1016/j.celrep.2024.114479_bib63) 2018; 525 Yu (10.1016/j.celrep.2024.114479_bib106) 2017; 8 Kode (10.1016/j.celrep.2024.114479_bib49) 2019; 235 Li (10.1016/j.celrep.2024.114479_bib70) 2014; 9 Herfst (10.1016/j.celrep.2024.114479_bib91) 2012; 336 Huang (10.1016/j.celrep.2024.114479_bib55) 2014; 456–457 Günther (10.1016/j.celrep.2024.114479_bib44) 2022; 28 Health (10.1016/j.celrep.2024.114479_bib56) 2023 Gao (10.1016/j.celrep.2024.114479_bib87) 2009; 5 Li (10.1016/j.celrep.2024.114479_bib98) 2018; 34 Pohlmann (10.1016/j.celrep.2024.114479_bib24) 2018; 8 (10.1016/j.celrep.2024.114479_bib60) 2023; 2017 Wang (10.1016/j.celrep.2024.114479_bib78) 2010; 84 Pohlmann (10.1016/j.celrep.2024.114479_bib28) 2022; 13 Bergervoet (10.1016/j.celrep.2024.114479_bib64) 2019; 11 Li (10.1016/j.celrep.2024.114479_bib67) 2011; 6 Shapiro (10.1016/j.celrep.2024.114479_bib109) 2006; 23 Beato (10.1016/j.celrep.2024.114479_bib80) 2013; 435 Caliendo (10.1016/j.celrep.2024.114479_bib32) 2022; 12 Weingartl (10.1016/j.celrep.2024.114479_bib96) 2010; 84 Park (10.1016/j.celrep.2024.114479_bib75) 2017; 7 Chen (10.1016/j.celrep.2024.114479_bib14) 2006; 80 Bielejec (10.1016/j.celrep.2024.114479_bib111) 2016; 33 Neverov (10.1016/j.celrep.2024.114479_bib7) 2014; 10 Kim (10.1016/j.celrep.2024.114479_bib39) 2017; 53 Stech (10.1016/j.celrep.2024.114479_bib72) 2015; 5 Capua (10.1016/j.celrep.2024.114479_bib37) 2006; 12 Kaverin (10.1016/j.celrep.2024.114479_bib79) 2007; 81 Mellquist (10.1016/j.celrep.2024.114479_bib77) 1998; 37 Gubareva (10.1016/j.celrep.2024.114479_bib115) 2019; 24 Bruno (10.1016/j.celrep.2024.114479_bib27) 2023; 30 Organization (10.1016/j.celrep.2024.114479_bib26) 2023 Lemey (10.1016/j.celrep.2024.114479_bib107) 2009; 5 Bruno (10.1016/j.celrep.2024.114479_bib34) 2023; 133 Wille (10.1016/j.celrep.2024.114479_bib57) 2011; 156 Katoh (10.1016/j.celrep.2024.114479_bib101) 2013; 30 Lee (10.1016/j.celrep.2024.114479_bib17) 2021; 11 Ariyama (10.1016/j.celrep.2024.114479_bib36) 2023; 29 Kawaoka (10.1016/j.celrep.2024.114479_bib5) 1988; 163 Fusaro (10.1016/j.celrep.2024.114479_bib85) 2024; 10 Nguyen (10.1016/j.celrep.2024.114479_bib104) 2015; 32 Demirev (10.1016/j.celrep.2024.114479_bib40) 2023; 2023 Wille (10.1016/j.celrep.2024.114479_bib35) 2023; 17 Wang (10.1016/j.celrep.2024.114479_bib90) 2012; 86 Omoto (10.1016/j.celrep.2024.114479_bib50) 2018; 8 Frederiksen (10.1016/j.celrep.2024.114479_bib54) 2012; 18 Smith (10.1016/j.celrep.2024.114479_bib21) 2015; 9 Gu (10.1016/j.celrep.2024.114479_bib113) 2014; 30 Leang (10.1016/j.celrep.2024.114479_bib51) 2017 Hall (10.1016/j.celrep.2024.114479_bib23) 2015; 21 King (10.1016/j.celrep.2024.114479_bib66) 2022; 8 H5N8 (10.1016/j.celrep.2024.114479_bib16) 2016; 354 Zinyakov (10.1016/j.celrep.2024.114479_bib41) 2022; 14 Olsen (10.1016/j.celrep.2024.114479_bib15) 2006; 312 Salzberg (10.1016/j.celrep.2024.114479_bib18) 2007; 13 Li (10.1016/j.celrep.2024.114479_bib83) 2020; 67 Ma (10.1016/j.celrep.2024.114479_bib88) 2016; 113 Sagulenko (10.1016/j.celrep.2024.114479_bib105) 2018; 4 Alkie (10.1016/j.celrep.2024.114479_bib94) 2023; 12 den Heyer (10.1016/j.celrep.2024.114479_bib58) 2021; 37 Dhingra (10.1016/j.celrep.2024.114479_bib2) 2018; 5 Gao (10.1016/j.celrep.2024.114479_bib76) 2018; 217 Sun (10.1016/j.celrep.2024.114479_bib29) 2023; 16 Shi (10.1016/j.celrep.2024.114479_bib30) 2023; 12 Antigua (10.1016/j.celrep.2024.114479_bib82) 2022; 13 Gass (10.1016/j.celrep.2024.114479_bib45) 2023; 32 Gilbert (10.1016/j.celrep.2024.114479_bib4) 2006; 12 Kosik (10.1016/j.celrep.2024.114479_bib1) 2019; 11 Davies (10.1016/j.celrep.2024.114479_bib53) 2021; 14 Kandeil (10.1016/j.celrep.2024.114479_bib93) 2023; 14 Ince (10.1016/j.celrep.2024.114479_bib8) 2013; 87 Liang (10.1016/j.celrep.2024.114479_bib65) 2021; 13 Andreev (10.1016/j.celrep.2024.114479_bib95) 2024; 229 Chen (10.1016/j.celrep.2024.114479_bib73) 2020; 11 Liu (10.1016/j.celrep.2024.114479_bib12) 2005; 309 Deng (10.1016/j.celrep.2024.114479_bib6) 2013; 87 Shu (10.1016/j.celrep.2024.114479_bib99) 2017; 22 Alkie (10.1016/j.celrep.2024.114479_bib33) 2022; 8 Sorrell (10.1016/j.celrep.2024.114479_bib68) 2010; 84 Mitnaul (10.1016/j.celrep.2024.114479_bib86) 2000; 74 Adlhoch (10.1016/j.celrep.2024.114479_bib48) 2022; 20 Zhou (10.1016/j.celrep.2024.114479_bib69) 2009; 4 Hulse-Post (10.1016/j.celrep.2024.114479_bib9) 2005; 102 Puryear (10.1016/j.celrep.2024.114479_bib59) 2016; 5 Gu (10.1016/j.celrep.2024.114479_bib92) 2017; 48 Dusek (10.1016/j.celrep.2024.114479_bib42) 2014; 9 Webster (10.1016/j.celrep.2024.114479_bib3) 1992; 56 Lee (10.1016/j.celrep.2024.114479_bib47) 2020; 16 Chen (10.1016/j.celrep.2024.114479_bib13) 2005; 436 Blumenkrantz (10.1016/j.celrep.2024.114479_bib74) 2013; 87 Suchard (10.1016/j.celrep.2024.114479_bib108) 2018; 4 Makalo (10.1016/j.celrep.2024.114479_bib84) 2022; 11 Youk (10.1016/j.celrep.2024.114479_bib100) 2023; 587 Pasick (10.1016/j.celrep.2024.114479_bib19) 2015; 5 Puryear (10.1016/j.celrep.2024.114479_bib31) 2023; 29 Reid (10.1016/j.celrep.2024.114479_bib20) 2011; 58 Xu (10.1016/j.celrep.2024.114479_bib10) 1999; 261 Spackman (10.1016/j.celrep.2024.114479_bib97) 2002; 40 Matsuoka (10.1016/j.celrep.2024.114479_bib71) 2009; 83 Hinshaw (10.1016/j.celrep.2024.114479_bib89) 1984; 51 Hall (10.1016/j.celrep.2024.114479_bib43) 2014; 28 King (10.1016/j.celrep.2024.114479_bib62) 2022; 14 Pandey (10.1016/j.celrep.2024.114479_bib81) 2022; 49 Rambaut (10.1016/j.celrep.2024.114479_bib110) 2018; 67 Martin (10.1016/j.celrep.2024.114479_bib102) 2021; 7 Patel (10.1016/j.celrep.2024.114479_bib52) 2022; 208 de Vries (10.1016/j.celrep.2024.114479_bib22) 2015; 21 Xie (10.1016/j.celrep.2024.114479_bib25) 2023; 622 Pohlmann (10.1016/j.celrep.2024.114479_bib38) 2017; 23 Kalyaanamoorthy (10.1016/j.celrep.2024.114479_bib103) 2017; 14 Hartby (10.1016/j.celrep.2024.114479_bib46) 2015; 302–310 Zhao (10.1016/j.celrep.2024.114479_bib11) 2008; 89 Hicks (10.1016/j.celrep.2024.114479_bib112) 2019; 19 Marathe (10.1016/j.celrep.2024.114479_bib114) 2013; 8 |
References_xml | – volume: 17 year: 2023 ident: bib35 article-title: No evidence for HPAI H5N1 2.3.4.4b incursion into Australia in 2022 publication-title: Influenza Other Respir. Viruses – volume: 16 start-page: 48 year: 2020 ident: bib47 article-title: Evidence of avian influenza virus in seabirds breeding on a Norwegian high-Arctic archipelago publication-title: BMC Vet. Res. – volume: 163 start-page: 247 year: 1988 end-page: 250 ident: bib5 article-title: Is the gene pool of influenza viruses in shorebirds and gulls different from that in wild ducks? publication-title: Virology – volume: 13 start-page: e00609 year: 2022 end-page: e00622 ident: bib28 article-title: Has Epizootic Become Enzootic? Evidence for a Fundamental Change in the Infection Dynamics of Highly Pathogenic Avian Influenza in Europe, 2021 publication-title: MBio – volume: 16 year: 2023 ident: bib29 article-title: High activity levels of avian influenza upwards 2018–2022: A global epidemiological overview of fowl and human infections publication-title: One Health – volume: 5 start-page: e81 year: 2016 end-page: e89 ident: bib59 article-title: Prevalence of influenza A virus in live-captured North Atlantic gray seals: a possible wild reservoir publication-title: Emerg. Microb. Infect. – volume: 58 start-page: 76 year: 2011 end-page: 78 ident: bib20 article-title: First Reported Incursion of Highly Pathogenic Notifiable Avian Influenza A H5N1 Viruses from Clade 2.3.2 into European Poultry publication-title: Transbound. Emerg. Dis. – volume: 86 start-page: 13865 year: 2012 end-page: 13866 ident: bib90 article-title: Complete genome sequence of an H10N5 avian influenza virus isolated from pigs in central China publication-title: J. Virol. – volume: 456–457 start-page: 353 year: 2014 end-page: 363 ident: bib55 article-title: Perpetuation and reassortment of gull influenza A viruses in Atlantic North America publication-title: Virology – volume: 29 start-page: 1842 year: 2023 end-page: 1845 ident: bib36 article-title: Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus in Wild Birds, Chile publication-title: Emerg. Infect. Dis. – volume: 8 year: 2022 ident: bib66 article-title: Highly pathogenic avian influenza virus incursions of subtype H5N8, H5N5, H5N1, H5N4, and H5N3 in Germany during 2020-21. Virus Evolution publication-title: Virus Evol. – volume: 84 start-page: 11831 year: 2010 end-page: 11840 ident: bib68 article-title: A 27-amino-acid deletion in the neuraminidase stalk supports replication of an avian H2N2 influenza A virus in the respiratory tract of chickens publication-title: J. Virol. – volume: 30 start-page: 2811 year: 2014 end-page: 2812 ident: bib113 article-title: circlize implements and enhances circular visualization in R publication-title: Bioinformatics – volume: 67 start-page: 263 year: 2020 end-page: 275 ident: bib83 article-title: Amino acid substitutions in antigenic region B of hemagglutinin play a critical role in the antigenic drift of subclade 2.3.4.4 highly pathogenic H5NX influenza viruses publication-title: Viruses – volume: 11 start-page: 757 year: 2022 end-page: 760 ident: bib84 article-title: Highly pathogenic avian influenza (A/H5N1) virus outbreaks in Lesotho, May 2021 publication-title: Emerg. Microb. Infect. – volume: 23 start-page: 633 year: 2017 end-page: 636 ident: bib38 article-title: Outbreaks among Wild Birds and Domestic Poultry Caused by Reassorted Influenza A(H5N8) Clade 2.3.4.4 Viruses, Germany, 2016 publication-title: Emerg. Infect. Dis. – volume: 6 year: 2011 ident: bib67 article-title: Emergence and Genetic Variation of Neuraminidase Stalk Deletions in Avian Influenza Viruses publication-title: PLoS One – volume: 32 start-page: 198 year: 2023 end-page: 213 ident: bib45 article-title: Global dissemination of influenza A virus is driven by wild bird migration through arctic and subarctic zones publication-title: Mol. Ecol. – volume: 30 start-page: 772 year: 2013 end-page: 780 ident: bib101 article-title: MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability publication-title: Mol. Biol. Evol. – volume: 81 start-page: 12911 year: 2007 end-page: 12917 ident: bib79 article-title: Epitope Mapping of the Hemagglutinin Molecule of a Highly Pathogenic H5N1 Influenza Virus by Using Monoclonal Antibodies publication-title: J. Virol. – volume: 12 year: 2023 ident: bib30 article-title: Alarming situation of emerging H5 and H7 avian influenza and effective control strategies publication-title: Emerg. Microb. Infect. – volume: 113 start-page: 5335 year: 2016 end-page: 5339 ident: bib88 article-title: Reticulate evolution is favored in influenza niche switching publication-title: Proc. Natl. Acad. Sci. USA – volume: 28 start-page: 2383 year: 2022 end-page: 2388 ident: bib44 article-title: Iceland as Stepping Stone for Spread of Highly Pathogenic Avian Influenza Virus between Europe and North America publication-title: Emerg. Infect. Dis. – volume: 53 start-page: 56 year: 2017 end-page: 67 ident: bib39 article-title: Genetic and phylogenetic characterizations of a novel genotype of highly pathogenic avian influenza (HPAI) H5N8 viruses in 2016/2017 in South Korea publication-title: Infect. Genet. Evol. – volume: 18 start-page: 530 year: 2012 end-page: 542 ident: bib54 article-title: Multicolony tracking reveals the winter distribution of a pelagic seabird on an ocean basin scale publication-title: Divers. Distrib. – volume: 37 start-page: 611 year: 2021 end-page: 630 ident: bib58 article-title: Contrasting trends in gray seal ( publication-title: Mar. Mamm. Sci. – volume: 587 year: 2023 ident: bib100 article-title: H5N1 highly pathogenic avian influenza clade 2.3.4.4b in wild and domestic birds: Introductions into the United States and reassortments, December 2021–April 2022 publication-title: Virology – volume: 40 start-page: 3256 year: 2002 end-page: 3260 ident: bib97 article-title: Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes publication-title: J. Clin. Microbiol. – volume: 8 start-page: 28 year: 2017 end-page: 36 ident: bib106 article-title: ggtree: an r package for visualization and annotation of phylogenetic trees with their covariates and other associated data publication-title: Methods Ecol. Evol. – volume: 87 start-page: 10539 year: 2013 end-page: 10551 ident: bib74 article-title: The short stalk length of highly pathogenic avian influenza H5N1 virus neuraminidase limits transmission of pandemic H1N1 virus in ferrets publication-title: J. Virol. – volume: 10 year: 2014 ident: bib7 article-title: Intrasubtype Reassortments Cause Adaptive Amino Acid Replacements in H3N2 Influenza Genes publication-title: PLoS Genet. – volume: 7 year: 2017 ident: bib75 article-title: Adaptive mutations of neuraminidase stalk truncation and deglycosylation confer enhanced pathogenicity of influenza A viruses publication-title: Sci. Rep. – volume: 8 start-page: 9633 year: 2018 ident: bib50 article-title: Characterization of influenza virus variants induced by treatment with the endonuclease inhibitor baloxavir marboxil publication-title: Sci. Rep. – volume: 235 start-page: 21 year: 2019 end-page: 24 ident: bib49 article-title: A novel I117T substitution in neuraminidase of highly pathogenic avian influenza H5N1 virus conferring reduced susceptibility to oseltamivir and zanamivir publication-title: Vet. Microbiol. – volume: 2017 year: 2023 ident: bib61 article-title: Health W.O.f.A. United Kingdom - Influenza A Viruses of High Pathogenicity (Inf. with) (Non-poultry Including Wild Birds) publication-title: WAHIS – volume: 8 start-page: 15 year: 2018 ident: bib24 article-title: Swarm incursions of reassortants of highly pathogenic avian influenza virus strains H5N8 and H5N5, clade 2.3.4.4b, Germany, winter 2016/17 publication-title: Sci. Rep. – volume: 84 start-page: 6570 year: 2010 end-page: 6577 ident: bib78 article-title: Glycosylation at 158N of the hemagglutinin protein and receptor binding specificity synergistically affect the antigenicity and immunogenicity of a live attenuated H5N1 A/Vietnam/1203/2004 vaccine virus in ferrets publication-title: J. Virol. – year: 2023 ident: bib26 article-title: Cumulative Number of Confirmed Human Cases for Avian Influenza A(H5N1) Reported to WHO, 2003-2023 – volume: 87 start-page: 9452 year: 2013 end-page: 9462 ident: bib6 article-title: Complex Reassortment of Multiple Subtypes of Avian Influenza Viruses in Domestic Ducks at the Dongting Lake Region of China publication-title: J. Virol. – volume: 48 start-page: 7 year: 2017 ident: bib92 article-title: The T160A hemagglutinin substitution affects not only receptor binding property but also transmissibility of H5N1 clade 2.3.4 avian influenza virus in guinea pigs publication-title: Vet. Res. – volume: 261 start-page: 15 year: 1999 end-page: 19 ident: bib10 article-title: Genetic Characterization of the Pathogenic Influenza A/Goose/Guangdong/1/96 (H5N1) Virus: Similarity of Its Hemagglutinin Gene to Those of H5N1 Viruses from the 1997 Outbreaks in Hong Kong publication-title: Virology – volume: 67 start-page: 901 year: 2018 end-page: 904 ident: bib110 article-title: Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7 publication-title: Syst. Biol. – volume: 21 start-page: 842 year: 2015 end-page: 846 ident: bib22 article-title: Rapid Emergence of Highly Pathogenic Avian Influenza Subtypes from a Subtype H5N1 Hemagglutinin Variant publication-title: Emerg. Infect. Dis. – volume: 8 year: 2013 ident: bib114 article-title: Determination of Neuraminidase Kinetic Constants Using Whole Influenza Virus Preparations and Correction for Spectroscopic Interference by a Fluorogenic Substrate publication-title: PLoS One – volume: 5 year: 2009 ident: bib107 article-title: Bayesian Phylogeography Finds Its Roots publication-title: PLoS Comput. Biol. – volume: 133 start-page: 27 year: 2023 end-page: 30 ident: bib34 article-title: Phylogenetic analysis reveals that the H5N1 avian influenza A outbreak in poultry in Ecuador in November 2022 is associated with the highly pathogenic clade 2.3.4.4b publication-title: Int. J. Infect. Dis. – volume: 11 start-page: 346 year: 2019 ident: bib1 article-title: Influenza Hemagglutinin and Neuraminidase: Yin⁻Yang Proteins Coevolving to Thwart Immunity publication-title: Viruses – volume: 5 year: 2009 ident: bib87 article-title: Identification of Amino Acids in HA and PB2 Critical for the Transmission of H5N1 Avian Influenza Viruses in a Mammalian Host publication-title: PLoS Pathog. – volume: 4 year: 2018 ident: bib105 article-title: TreeTime: Maximum-likelihood phylodynamic analysis publication-title: Virus Evol. – volume: 12 year: 2023 ident: bib94 article-title: Characterization of neurotropic HPAI H5N1 viruses with novel genome constellations and mammalian adaptive mutations in free-living mesocarnivores in Canada publication-title: Emerg. Microb. Infect. – volume: 436 start-page: 191 year: 2005 end-page: 192 ident: bib13 article-title: Avian flu: H5N1 virus outbreak in migratory waterfowl publication-title: Nature – volume: 5 start-page: 9484 year: 2015 ident: bib19 article-title: Reassortant Highly Pathogenic Influenza A H5N2 Virus Containing Gene Segments Related to Eurasian H5N8 in British Columbia, Canada, 2014 publication-title: Sci. Rep. – volume: 14 year: 2021 ident: bib53 article-title: Multispecies tracking reveals a major seabird hotspot in the North Atlantic publication-title: Conserv. Lett. – year: 2023 ident: bib56 article-title: United States of America - Influenza A Viruses of High Pathogenicity (Inf. with) (Non-poultry Including Wild Birds) (2017-) publication-title: WAHIS – volume: 51 start-page: 863 year: 1984 end-page: 865 ident: bib89 article-title: Are seals frequently infected with avian influenza viruses? publication-title: J. Virol. – volume: 11 year: 2020 ident: bib73 article-title: Truncation or Deglycosylation of the Neuraminidase Stalk Enhances the Pathogenicity of the H5N1 Subtype Avian Influenza Virus in Mallard Ducks publication-title: Front. Microbiol. – volume: 49 start-page: 8109 year: 2022 end-page: 8120 ident: bib81 article-title: N-glycosylation, a leading role in viral infection and immunity development publication-title: Mol. Biol. Rep. – volume: 23 start-page: 7 year: 2006 end-page: 9 ident: bib109 article-title: Choosing Appropriate Substitution Models for the Phylogenetic Analysis of Protein-Coding Sequences publication-title: Mol. Biol. Evol. – volume: 56 start-page: 152 year: 1992 end-page: 179 ident: bib3 article-title: Evolution and ecology of influenza A viruses publication-title: Viruses – volume: 9 start-page: 271 year: 2015 end-page: 276 ident: bib21 article-title: Nomenclature updates resulting from the evolution of avian influenza A(H5) virus clades 2.1.3.2a, 2.2.1, and 2.3.4 during 2013–2014 publication-title: Influenza Other Respir. Viruses – volume: 84 start-page: 2245 year: 2010 end-page: 2256 ident: bib96 article-title: Genetic and Pathobiologic Characterization of Pandemic H1N1 2009 Influenza Viruses from a Naturally Infected Swine Herd publication-title: J. Virol. – volume: 302–310 start-page: 309 year: 2015 ident: bib46 article-title: First Characterization of Avian Influenza Viruses from Greenland 2014 publication-title: 60 %J Avian Diseases – volume: 525 start-page: 216 year: 2018 end-page: 223 ident: bib63 article-title: Isolation and characterization of H5Nx highly pathogenic avian influenza viruses of clade 2.3.4.4 in Russia publication-title: Virology – volume: 9 year: 2014 ident: bib70 article-title: A 20-Amino-Acid Deletion in the Neuraminidase Stalk and a Five-Amino-Acid Deletion in the NS1 Protein Both Contribute to the Pathogenicity of H5N1 Avian Influenza Viruses in Mallard Ducks publication-title: PLoS One – volume: 5 year: 2015 ident: bib72 article-title: The Neuraminidase Stalk Deletion Serves as Major Virulence Determinant of H5N1 Highly Pathogenic Avian Influenza Viruses in Chicken publication-title: Sci. Rep. – volume: 2017 year: 2023 ident: bib60 article-title: Health Iceland - Influenza A Viruses of High Pathogenicity (Inf. with) (Non-poultry Including Wild. Birds) publication-title: WAHIS – volume: 435 start-page: 350 year: 2013 end-page: 356 ident: bib80 article-title: Antigenic characterization of recent H5N1 highly pathogenic avian influenza viruses circulating in Egyptian poultry publication-title: Virology – volume: 336 start-page: 1534 year: 2012 end-page: 1541 ident: bib91 article-title: Airborne transmission of influenza A/H5N1 virus between ferrets publication-title: Airborne Transmission of Influenza A/H5N1 Virus Between Ferrets – volume: 14 start-page: 3082 year: 2023 ident: bib93 article-title: Rapid evolution of A(H5N1) influenza viruses after intercontinental spread to North America publication-title: Nat. Commun. – volume: 4 year: 2018 ident: bib108 article-title: Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10 publication-title: Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10 – volume: 89 start-page: 2182 year: 2008 end-page: 2193 ident: bib11 article-title: Genotypic diversity of H5N1 highly pathogenic avian influenza viruses publication-title: Viruses – volume: 354 start-page: 213 year: 2016 end-page: 217 ident: bib16 article-title: Role for Migratory Wild Birds in the Global Spread of Avian Influenza H5N8 publication-title: Science – volume: 14 start-page: 1849 year: 2022 ident: bib62 article-title: Connect to Protect: Dynamics and Genetic Connections of Highly Pathogenic Avian Influenza Outbreaks in Poultry from 2016 to 2021 in Germany publication-title: Viruses – volume: 83 start-page: 4704 year: 2009 end-page: 4708 ident: bib71 article-title: Neuraminidase Stalk Length and Additional Glycosylation of the Hemagglutinin Influence the Virulence of Influenza H5N1 Viruses for Mice publication-title: J. Virol. – volume: 28 start-page: 130 year: 2014 end-page: 136 ident: bib43 article-title: Avian influenza virus ecology in Iceland shorebirds: Intercontinental reassortment and movement publication-title: Infect. Genet. Evol. – volume: 13 start-page: 990 year: 2022 end-page: 1004 ident: bib82 article-title: Multiple HA substitutions in highly pathogenic avian influenza H5Nx viruses contributed to the change in the NA subtype preference publication-title: Virulence – volume: 87 start-page: 4330 year: 2013 end-page: 4338 ident: bib8 article-title: Reassortment Complements Spontaneous Mutation in Influenza A Virus NP and M1 Genes To Accelerate Adaptation to a New Host publication-title: J. Virol. – volume: 156 start-page: 107 year: 2011 end-page: 115 ident: bib57 article-title: Reassortment of American and Eurasian genes in an influenza A virus isolated from a great black-backed gull (Larus marinus), a species demonstrated to move between these regions publication-title: Arch. Virol. – volume: 208 year: 2022 ident: bib52 article-title: An optimized cell-based assay to assess influenza virus replication by measuring neuraminidase activity and its applications for virological surveillance publication-title: Antivir. Res. – volume: 9 year: 2014 ident: bib42 article-title: North Atlantic Migratory Bird Flyways Provide Routes for Intercontinental Movement of Avian Influenza Viruses publication-title: PLoS One – year: 2017 ident: bib51 article-title: Fluorescence-based Neuraminidase Inhibition Assay to Assess the Susceptibility of Influenza Viruses to The Neuraminidase Inhibitor Class of Antivirals publication-title: JoVE – volume: 217 start-page: 158 year: 2018 end-page: 166 ident: bib76 article-title: T160A mutation-induced deglycosylation at site 158 in hemagglutinin is a critical determinant of the dual receptor binding properties of clade 2.3.4.4 H5NX subtype avian influenza viruses publication-title: Vet. Microbiol. – volume: 309 start-page: 1206 year: 2005 ident: bib12 article-title: Highly Pathogenic H5N1 Influenza Virus Infection in Migratory Birds publication-title: Science – volume: 7 year: 2021 ident: bib102 article-title: RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets publication-title: Virus Evol. – volume: 11 start-page: 501 year: 2019 ident: bib64 article-title: Spread of Highly Pathogenic Avian Influenza (HPAI) H5N5 Viruses in Europe in 2016-2017 Appears Related to the Timing of Reassortment Events publication-title: Viruses – volume: 20 year: 2022 ident: bib48 article-title: Avian influenza overview June – September 2022 – volume: 622 start-page: 810 year: 2023 end-page: 817 ident: bib25 article-title: The episodic resurgence of highly pathogenic avian influenza H5 virus publication-title: Nature – volume: 29 start-page: 786 year: 2023 end-page: 791 ident: bib31 article-title: Highly Pathogenic Avian Influenza A(H5N1) Virus Outbreak in New England Seals, United States publication-title: Emerg. Infect. Dis. – volume: 102 start-page: 10682 year: 2005 end-page: 10687 ident: bib9 article-title: Role of domestic ducks in the propagation and biological evolution of highly pathogenic H5N1 influenza viruses in Asia publication-title: Proc. Natl. Acad. Sci. USA – volume: 312 start-page: 384 year: 2006 end-page: 388 ident: bib15 article-title: Global Patterns of Influenza A Virus in Wild Birds publication-title: Science – volume: 11 year: 2021 ident: bib17 article-title: Pathobiological Origins and Evolutionary History of Highly Pathogenic Avian Influenza Viruses publication-title: Viruses – volume: 4 year: 2009 ident: bib69 article-title: The Special Neuraminidase Stalk-Motif Responsible for Increased Virulence and Pathogenesis of H5N1 Influenza A Virus publication-title: PLoS One – volume: 32 start-page: 268 year: 2015 end-page: 274 ident: bib104 article-title: IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies publication-title: Mol. Biol. Evol. – volume: 12 year: 2022 ident: bib32 article-title: Transatlantic spread of highly pathogenic avian influenza H5N1 by wild birds from Europe to North America in 2021 publication-title: Sci. Rep. – volume: 2023 start-page: 1 year: 2023 end-page: 14 ident: bib40 article-title: Phylodynamics and Molecular Mutations of the Hemagglutinin Affecting Global Transmission and Host Adaptation of H5Nx Viruses publication-title: Transboundary and Emerging Diseases – volume: 12 start-page: 1319 year: 2006 end-page: 1324 ident: bib37 article-title: Control of Avian Influenza in Poultry publication-title: Emerg. Infect. Dis. – volume: 12 start-page: 1650 year: 2006 end-page: 1656. ident: bib4 article-title: Anatidae Migration in the Western Palearctic and Spread of Highly Pathogenic Avian Influenza H5N1 Virus publication-title: Emerg. Infect. Dis. – volume: 8 year: 2022 ident: bib33 article-title: A threat from both sides: Multiple introductions of genetically distinct H5 HPAI viruses into Canada via both East Asia-Australasia/Pacific and Atlantic flyways publication-title: Virus Evol. – volume: 21 start-page: 1251 year: 2015 end-page: 1252 ident: bib23 article-title: Rapidly Expanding Range of Highly Pathogenic Avian Influenza Viruses publication-title: Emerg. Infect. Dis. – volume: 13 start-page: 886 year: 2021 ident: bib65 article-title: Novel Clade 2.3.4.4b Highly Pathogenic Avian Influenza A H5N8 and H5N5 Viruses in Denmark, 2020 publication-title: Viruses – volume: 229 start-page: 1830 year: 2024 end-page: 1835 ident: bib95 article-title: Antiviral Susceptibility of Highly Pathogenic Avian Influenza A(H5N1) Viruses Circulating Globally in 2022–2023 publication-title: J. Infect. Dis. – volume: 80 start-page: 5976 year: 2006 end-page: 5983 ident: bib14 article-title: Properties and dissemination of H5N1 viruses isolated during an influenza outbreak in migratory waterfowl in western China publication-title: J. Virol. – volume: 24 year: 2019 ident: bib115 article-title: Assessing baloxavir susceptibility of influenza viruses circulating in the United States during the 2016/17 and 2017/18 seasons – volume: 74 start-page: 6015 year: 2000 end-page: 6020 ident: bib86 article-title: Balanced hemagglutinin and neuraminidase activities are critical for efficient replication of influenza A virus publication-title: J. Virol. – volume: 34 start-page: 3094 year: 2018 end-page: 3100 ident: bib98 article-title: Minimap2: pairwise alignment for nucleotide sequences publication-title: Bioinformatics – volume: 14 start-page: 587 year: 2017 end-page: 589 ident: bib103 article-title: ModelFinder: fast model selection for accurate phylogenetic estimates publication-title: Nat. Methods – volume: 10 year: 2024 ident: bib85 article-title: High pathogenic avian influenza A(H5) viruses of clade 2.3.4.4b in Europe—Why Trends of Virus Evolution Are More Difficult to Predict publication-title: Virus Evolution – volume: 13 start-page: 713 year: 2007 end-page: 718 ident: bib18 article-title: Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses publication-title: Emerg. Infect. Dis. – volume: 37 start-page: 6833 year: 1998 end-page: 6837 ident: bib77 article-title: The Amino Acid Following an Asn-X-Ser/Thr Sequon Is an Important Determinant of N-Linked Core Glycosylation Efficiency publication-title: Biochemistry – volume: 30 start-page: taad032 year: 2023 ident: bib27 article-title: First case of human infection with highly pathogenic H5 avian Influenza A virus in South America: A new zoonotic pandemic threat for 2023? publication-title: J. Trav. Med. – volume: 14 year: 2022 ident: bib41 article-title: Analysis of Avian Influenza (H5N5) Viruses Isolated in the Southwestern European Part of the Russian Federation in 2020–2021 publication-title: Viruses – volume: 22 year: 2017 ident: bib99 article-title: GISAID: Global initiative on sharing all influenza data – from vision to reality – volume: 5 year: 2018 ident: bib2 article-title: Geographical and Historical Patterns in the Emergences of Novel Highly Pathogenic Avian Influenza (HPAI) H5 and H7 Viruses in Poultry publication-title: Front. Vet. Sci. – volume: 33 start-page: 2167 year: 2016 end-page: 2169 ident: bib111 article-title: SpreaD3: Interactive Visualization of Spatiotemporal History and Trait Evolutionary Processes publication-title: Mol. Biol. Evol. – volume: 19 start-page: 108 year: 2019 ident: bib112 article-title: Global phylodynamic analysis of avian paramyxovirus-1 provides evidence of inter-host transmission and intercontinental spatial diffusion publication-title: BMC Evol. Biol. – volume: 21 start-page: 1251 year: 2015 ident: 10.1016/j.celrep.2024.114479_bib23 article-title: Rapidly Expanding Range of Highly Pathogenic Avian Influenza Viruses publication-title: Emerg. Infect. Dis. doi: 10.3201/eid2107.150403 – volume: 5 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib2 article-title: Geographical and Historical Patterns in the Emergences of Novel Highly Pathogenic Avian Influenza (HPAI) H5 and H7 Viruses in Poultry publication-title: Front. Vet. Sci. doi: 10.3389/fvets.2018.00084 – volume: 5 year: 2009 ident: 10.1016/j.celrep.2024.114479_bib107 article-title: Bayesian Phylogeography Finds Its Roots publication-title: PLoS Comput. Biol. doi: 10.1371/journal.pcbi.1000520 – volume: 5 year: 2009 ident: 10.1016/j.celrep.2024.114479_bib87 article-title: Identification of Amino Acids in HA and PB2 Critical for the Transmission of H5N1 Avian Influenza Viruses in a Mammalian Host publication-title: PLoS Pathog. doi: 10.1371/journal.ppat.1000709 – volume: 9 year: 2014 ident: 10.1016/j.celrep.2024.114479_bib42 article-title: North Atlantic Migratory Bird Flyways Provide Routes for Intercontinental Movement of Avian Influenza Viruses publication-title: PLoS One doi: 10.1371/journal.pone.0092075 – volume: 28 start-page: 2383 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib44 article-title: Iceland as Stepping Stone for Spread of Highly Pathogenic Avian Influenza Virus between Europe and North America publication-title: Emerg. Infect. Dis. doi: 10.3201/eid2812.221086 – volume: 10 year: 2024 ident: 10.1016/j.celrep.2024.114479_bib85 article-title: High pathogenic avian influenza A(H5) viruses of clade 2.3.4.4b in Europe—Why Trends of Virus Evolution Are More Difficult to Predict publication-title: Virus Evolution doi: 10.1093/ve/veae027 – volume: 80 start-page: 5976 year: 2006 ident: 10.1016/j.celrep.2024.114479_bib14 article-title: Properties and dissemination of H5N1 viruses isolated during an influenza outbreak in migratory waterfowl in western China publication-title: J. Virol. doi: 10.1128/JVI.00110-06 – volume: 435 start-page: 350 year: 2013 ident: 10.1016/j.celrep.2024.114479_bib80 article-title: Antigenic characterization of recent H5N1 highly pathogenic avian influenza viruses circulating in Egyptian poultry publication-title: Virology doi: 10.1016/j.virol.2012.09.016 – volume: 13 start-page: 886 year: 2021 ident: 10.1016/j.celrep.2024.114479_bib65 article-title: Novel Clade 2.3.4.4b Highly Pathogenic Avian Influenza A H5N8 and H5N5 Viruses in Denmark, 2020 publication-title: Viruses doi: 10.3390/v13050886 – volume: 9 year: 2014 ident: 10.1016/j.celrep.2024.114479_bib70 article-title: A 20-Amino-Acid Deletion in the Neuraminidase Stalk and a Five-Amino-Acid Deletion in the NS1 Protein Both Contribute to the Pathogenicity of H5N1 Avian Influenza Viruses in Mallard Ducks publication-title: PLoS One – volume: 67 start-page: 263 year: 2020 ident: 10.1016/j.celrep.2024.114479_bib83 article-title: Amino acid substitutions in antigenic region B of hemagglutinin play a critical role in the antigenic drift of subclade 2.3.4.4 highly pathogenic H5NX influenza viruses publication-title: Viruses – volume: 354 start-page: 213 year: 2016 ident: 10.1016/j.celrep.2024.114479_bib16 article-title: Role for Migratory Wild Birds in the Global Spread of Avian Influenza H5N8 publication-title: Science doi: 10.1126/science.aaf8852 – volume: 84 start-page: 6570 year: 2010 ident: 10.1016/j.celrep.2024.114479_bib78 article-title: Glycosylation at 158N of the hemagglutinin protein and receptor binding specificity synergistically affect the antigenicity and immunogenicity of a live attenuated H5N1 A/Vietnam/1203/2004 vaccine virus in ferrets publication-title: J. Virol. doi: 10.1128/JVI.00221-10 – volume: 67 start-page: 901 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib110 article-title: Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7 publication-title: Syst. Biol. doi: 10.1093/sysbio/syy032 – volume: 29 start-page: 1842 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib36 article-title: Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus in Wild Birds, Chile publication-title: Emerg. Infect. Dis. doi: 10.3201/eid2909.230067 – volume: 2017 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib60 article-title: Health Iceland - Influenza A Viruses of High Pathogenicity (Inf. with) (Non-poultry Including Wild. Birds) publication-title: WAHIS – volume: 49 start-page: 8109 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib81 article-title: N-glycosylation, a leading role in viral infection and immunity development publication-title: Mol. Biol. Rep. doi: 10.1007/s11033-022-07359-4 – volume: 18 start-page: 530 year: 2012 ident: 10.1016/j.celrep.2024.114479_bib54 article-title: Multicolony tracking reveals the winter distribution of a pelagic seabird on an ocean basin scale publication-title: Divers. Distrib. doi: 10.1111/j.1472-4642.2011.00864.x – volume: 11 start-page: 757 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib84 article-title: Highly pathogenic avian influenza (A/H5N1) virus outbreaks in Lesotho, May 2021 publication-title: Emerg. Microb. Infect. doi: 10.1080/22221751.2022.2043729 – volume: 336 start-page: 1534 year: 2012 ident: 10.1016/j.celrep.2024.114479_bib91 article-title: Airborne transmission of influenza A/H5N1 virus between ferrets publication-title: Airborne Transmission of Influenza A/H5N1 Virus Between Ferrets – volume: 86 start-page: 13865 year: 2012 ident: 10.1016/j.celrep.2024.114479_bib90 article-title: Complete genome sequence of an H10N5 avian influenza virus isolated from pigs in central China publication-title: J. Virol. doi: 10.1128/JVI.02687-12 – volume: 84 start-page: 2245 year: 2010 ident: 10.1016/j.celrep.2024.114479_bib96 article-title: Genetic and Pathobiologic Characterization of Pandemic H1N1 2009 Influenza Viruses from a Naturally Infected Swine Herd publication-title: J. Virol. doi: 10.1128/JVI.02118-09 – volume: 87 start-page: 9452 year: 2013 ident: 10.1016/j.celrep.2024.114479_bib6 article-title: Complex Reassortment of Multiple Subtypes of Avian Influenza Viruses in Domestic Ducks at the Dongting Lake Region of China publication-title: J. Virol. doi: 10.1128/JVI.00776-13 – volume: 34 start-page: 3094 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib98 article-title: Minimap2: pairwise alignment for nucleotide sequences publication-title: Bioinformatics doi: 10.1093/bioinformatics/bty191 – volume: 29 start-page: 786 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib31 article-title: Highly Pathogenic Avian Influenza A(H5N1) Virus Outbreak in New England Seals, United States publication-title: Emerg. Infect. Dis. doi: 10.3201/eid2904.221538 – volume: 456–457 start-page: 353 year: 2014 ident: 10.1016/j.celrep.2024.114479_bib55 article-title: Perpetuation and reassortment of gull influenza A viruses in Atlantic North America publication-title: Virology doi: 10.1016/j.virol.2014.04.009 – volume: 8 year: 2013 ident: 10.1016/j.celrep.2024.114479_bib114 article-title: Determination of Neuraminidase Kinetic Constants Using Whole Influenza Virus Preparations and Correction for Spectroscopic Interference by a Fluorogenic Substrate publication-title: PLoS One doi: 10.1371/journal.pone.0071401 – volume: 37 start-page: 611 year: 2021 ident: 10.1016/j.celrep.2024.114479_bib58 article-title: Contrasting trends in gray seal (Halichoerus grypus) pup production throughout the increasing northwest Atlantic metapopulation publication-title: Mar. Mamm. Sci. doi: 10.1111/mms.12773 – volume: 14 start-page: 3082 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib93 article-title: Rapid evolution of A(H5N1) influenza viruses after intercontinental spread to North America publication-title: Nat. Commun. doi: 10.1038/s41467-023-38415-7 – volume: 33 start-page: 2167 year: 2016 ident: 10.1016/j.celrep.2024.114479_bib111 article-title: SpreaD3: Interactive Visualization of Spatiotemporal History and Trait Evolutionary Processes publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msw082 – volume: 302–310 start-page: 309 year: 2015 ident: 10.1016/j.celrep.2024.114479_bib46 article-title: First Characterization of Avian Influenza Viruses from Greenland 2014 publication-title: 60 %J Avian Diseases – volume: 312 start-page: 384 year: 2006 ident: 10.1016/j.celrep.2024.114479_bib15 article-title: Global Patterns of Influenza A Virus in Wild Birds publication-title: Science doi: 10.1126/science.1122438 – volume: 133 start-page: 27 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib34 article-title: Phylogenetic analysis reveals that the H5N1 avian influenza A outbreak in poultry in Ecuador in November 2022 is associated with the highly pathogenic clade 2.3.4.4b publication-title: Int. J. Infect. Dis. doi: 10.1016/j.ijid.2023.04.403 – volume: 8 start-page: 15 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib24 article-title: Swarm incursions of reassortants of highly pathogenic avian influenza virus strains H5N8 and H5N5, clade 2.3.4.4b, Germany, winter 2016/17 publication-title: Sci. Rep. doi: 10.1038/s41598-017-16936-8 – volume: 53 start-page: 56 year: 2017 ident: 10.1016/j.celrep.2024.114479_bib39 article-title: Genetic and phylogenetic characterizations of a novel genotype of highly pathogenic avian influenza (HPAI) H5N8 viruses in 2016/2017 in South Korea publication-title: Infect. Genet. Evol. doi: 10.1016/j.meegid.2017.05.001 – volume: 16 start-page: 48 year: 2020 ident: 10.1016/j.celrep.2024.114479_bib47 article-title: Evidence of avian influenza virus in seabirds breeding on a Norwegian high-Arctic archipelago publication-title: BMC Vet. Res. doi: 10.1186/s12917-020-2265-2 – volume: 8 start-page: 9633 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib50 article-title: Characterization of influenza virus variants induced by treatment with the endonuclease inhibitor baloxavir marboxil publication-title: Sci. Rep. doi: 10.1038/s41598-018-27890-4 – volume: 8 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib33 article-title: A threat from both sides: Multiple introductions of genetically distinct H5 HPAI viruses into Canada via both East Asia-Australasia/Pacific and Atlantic flyways publication-title: Virus Evol. doi: 10.1093/ve/veac077 – volume: 217 start-page: 158 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib76 article-title: T160A mutation-induced deglycosylation at site 158 in hemagglutinin is a critical determinant of the dual receptor binding properties of clade 2.3.4.4 H5NX subtype avian influenza viruses publication-title: Vet. Microbiol. doi: 10.1016/j.vetmic.2018.03.018 – volume: 51 start-page: 863 year: 1984 ident: 10.1016/j.celrep.2024.114479_bib89 article-title: Are seals frequently infected with avian influenza viruses? publication-title: J. Virol. doi: 10.1128/jvi.51.3.863-865.1984 – volume: 14 start-page: 587 year: 2017 ident: 10.1016/j.celrep.2024.114479_bib103 article-title: ModelFinder: fast model selection for accurate phylogenetic estimates publication-title: Nat. Methods doi: 10.1038/nmeth.4285 – volume: 8 start-page: 28 year: 2017 ident: 10.1016/j.celrep.2024.114479_bib106 article-title: ggtree: an r package for visualization and annotation of phylogenetic trees with their covariates and other associated data publication-title: Methods Ecol. Evol. doi: 10.1111/2041-210X.12628 – volume: 113 start-page: 5335 year: 2016 ident: 10.1016/j.celrep.2024.114479_bib88 article-title: Reticulate evolution is favored in influenza niche switching publication-title: Proc. Natl. Acad. Sci. USA doi: 10.1073/pnas.1522921113 – volume: 12 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib32 article-title: Transatlantic spread of highly pathogenic avian influenza H5N1 by wild birds from Europe to North America in 2021 publication-title: Sci. Rep. doi: 10.1038/s41598-022-13447-z – volume: 20 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib48 – year: 2023 ident: 10.1016/j.celrep.2024.114479_bib56 article-title: United States of America - Influenza A Viruses of High Pathogenicity (Inf. with) (Non-poultry Including Wild Birds) (2017-) publication-title: WAHIS – volume: 587 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib100 article-title: H5N1 highly pathogenic avian influenza clade 2.3.4.4b in wild and domestic birds: Introductions into the United States and reassortments, December 2021–April 2022 publication-title: Virology doi: 10.1016/j.virol.2023.109860 – volume: 13 start-page: e00609 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib28 article-title: Has Epizootic Become Enzootic? Evidence for a Fundamental Change in the Infection Dynamics of Highly Pathogenic Avian Influenza in Europe, 2021 publication-title: MBio doi: 10.1128/mbio.00609-22 – volume: 81 start-page: 12911 year: 2007 ident: 10.1016/j.celrep.2024.114479_bib79 article-title: Epitope Mapping of the Hemagglutinin Molecule of a Highly Pathogenic H5N1 Influenza Virus by Using Monoclonal Antibodies publication-title: J. Virol. doi: 10.1128/JVI.01522-07 – volume: 12 start-page: 1319 year: 2006 ident: 10.1016/j.celrep.2024.114479_bib37 article-title: Control of Avian Influenza in Poultry publication-title: Emerg. Infect. Dis. doi: 10.3201/eid1209.060430 – volume: 229 start-page: 1830 year: 2024 ident: 10.1016/j.celrep.2024.114479_bib95 article-title: Antiviral Susceptibility of Highly Pathogenic Avian Influenza A(H5N1) Viruses Circulating Globally in 2022–2023 publication-title: J. Infect. Dis. doi: 10.1093/infdis/jiad418 – volume: 156 start-page: 107 year: 2011 ident: 10.1016/j.celrep.2024.114479_bib57 article-title: Reassortment of American and Eurasian genes in an influenza A virus isolated from a great black-backed gull (Larus marinus), a species demonstrated to move between these regions publication-title: Arch. Virol. doi: 10.1007/s00705-010-0839-1 – volume: 8 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib66 article-title: Highly pathogenic avian influenza virus incursions of subtype H5N8, H5N5, H5N1, H5N4, and H5N3 in Germany during 2020-21. Virus Evolution 8 publication-title: Virus Evol. doi: 10.1093/ve/veac035 – volume: 4 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib105 article-title: TreeTime: Maximum-likelihood phylodynamic analysis publication-title: Virus Evol. doi: 10.1093/ve/vex042 – volume: 2017 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib61 article-title: Health W.O.f.A. United Kingdom - Influenza A Viruses of High Pathogenicity (Inf. with) (Non-poultry Including Wild Birds) publication-title: WAHIS – volume: 11 year: 2020 ident: 10.1016/j.celrep.2024.114479_bib73 article-title: Truncation or Deglycosylation of the Neuraminidase Stalk Enhances the Pathogenicity of the H5N1 Subtype Avian Influenza Virus in Mallard Ducks publication-title: Front. Microbiol. – volume: 525 start-page: 216 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib63 article-title: Isolation and characterization of H5Nx highly pathogenic avian influenza viruses of clade 2.3.4.4 in Russia publication-title: Virology doi: 10.1016/j.virol.2018.09.024 – volume: 6 year: 2011 ident: 10.1016/j.celrep.2024.114479_bib67 article-title: Emergence and Genetic Variation of Neuraminidase Stalk Deletions in Avian Influenza Viruses publication-title: PLoS One – volume: 40 start-page: 3256 year: 2002 ident: 10.1016/j.celrep.2024.114479_bib97 article-title: Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.40.9.3256-3260.2002 – volume: 32 start-page: 268 year: 2015 ident: 10.1016/j.celrep.2024.114479_bib104 article-title: IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msu300 – volume: 5 start-page: e81 year: 2016 ident: 10.1016/j.celrep.2024.114479_bib59 article-title: Prevalence of influenza A virus in live-captured North Atlantic gray seals: a possible wild reservoir publication-title: Emerg. Microb. Infect. doi: 10.1038/emi.2016.77 – volume: 11 start-page: 501 year: 2019 ident: 10.1016/j.celrep.2024.114479_bib64 article-title: Spread of Highly Pathogenic Avian Influenza (HPAI) H5N5 Viruses in Europe in 2016-2017 Appears Related to the Timing of Reassortment Events publication-title: Viruses doi: 10.3390/v11060501 – volume: 4 year: 2009 ident: 10.1016/j.celrep.2024.114479_bib69 article-title: The Special Neuraminidase Stalk-Motif Responsible for Increased Virulence and Pathogenesis of H5N1 Influenza A Virus publication-title: PLoS One doi: 10.1371/journal.pone.0006277 – volume: 102 start-page: 10682 year: 2005 ident: 10.1016/j.celrep.2024.114479_bib9 article-title: Role of domestic ducks in the propagation and biological evolution of highly pathogenic H5N1 influenza viruses in Asia publication-title: Proc. Natl. Acad. Sci. USA doi: 10.1073/pnas.0504662102 – volume: 309 start-page: 1206 year: 2005 ident: 10.1016/j.celrep.2024.114479_bib12 article-title: Highly Pathogenic H5N1 Influenza Virus Infection in Migratory Birds publication-title: Science doi: 10.1126/science.1115273 – volume: 30 start-page: 772 year: 2013 ident: 10.1016/j.celrep.2024.114479_bib101 article-title: MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/mst010 – volume: 12 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib94 article-title: Characterization of neurotropic HPAI H5N1 viruses with novel genome constellations and mammalian adaptive mutations in free-living mesocarnivores in Canada publication-title: Emerg. Microb. Infect. doi: 10.1080/22221751.2023.2186608 – volume: 14 start-page: 1849 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib62 article-title: Connect to Protect: Dynamics and Genetic Connections of Highly Pathogenic Avian Influenza Outbreaks in Poultry from 2016 to 2021 in Germany publication-title: Viruses doi: 10.3390/v14091849 – volume: 23 start-page: 7 year: 2006 ident: 10.1016/j.celrep.2024.114479_bib109 article-title: Choosing Appropriate Substitution Models for the Phylogenetic Analysis of Protein-Coding Sequences publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msj021 – volume: 19 start-page: 108 year: 2019 ident: 10.1016/j.celrep.2024.114479_bib112 article-title: Global phylodynamic analysis of avian paramyxovirus-1 provides evidence of inter-host transmission and intercontinental spatial diffusion publication-title: BMC Evol. Biol. doi: 10.1186/s12862-019-1431-2 – volume: 32 start-page: 198 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib45 article-title: Global dissemination of influenza A virus is driven by wild bird migration through arctic and subarctic zones publication-title: Mol. Ecol. doi: 10.1111/mec.16738 – volume: 7 year: 2021 ident: 10.1016/j.celrep.2024.114479_bib102 article-title: RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets publication-title: Virus Evol. doi: 10.1093/ve/veaa087 – volume: 9 start-page: 271 year: 2015 ident: 10.1016/j.celrep.2024.114479_bib21 article-title: Nomenclature updates resulting from the evolution of avian influenza A(H5) virus clades 2.1.3.2a, 2.2.1, and 2.3.4 during 2013–2014 publication-title: Influenza Other Respir. Viruses doi: 10.1111/irv.12324 – volume: 74 start-page: 6015 year: 2000 ident: 10.1016/j.celrep.2024.114479_bib86 article-title: Balanced hemagglutinin and neuraminidase activities are critical for efficient replication of influenza A virus publication-title: J. Virol. doi: 10.1128/JVI.74.13.6015-6020.2000 – volume: 56 start-page: 152 year: 1992 ident: 10.1016/j.celrep.2024.114479_bib3 article-title: Evolution and ecology of influenza A viruses publication-title: Viruses – volume: 89 start-page: 2182 year: 2008 ident: 10.1016/j.celrep.2024.114479_bib11 article-title: Genotypic diversity of H5N1 highly pathogenic avian influenza viruses publication-title: Viruses – volume: 16 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib29 article-title: High activity levels of avian influenza upwards 2018–2022: A global epidemiological overview of fowl and human infections publication-title: One Health doi: 10.1016/j.onehlt.2023.100511 – volume: 235 start-page: 21 year: 2019 ident: 10.1016/j.celrep.2024.114479_bib49 article-title: A novel I117T substitution in neuraminidase of highly pathogenic avian influenza H5N1 virus conferring reduced susceptibility to oseltamivir and zanamivir publication-title: Vet. Microbiol. doi: 10.1016/j.vetmic.2019.06.005 – volume: 13 start-page: 990 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib82 article-title: Multiple HA substitutions in highly pathogenic avian influenza H5Nx viruses contributed to the change in the NA subtype preference publication-title: Virulence doi: 10.1080/21505594.2022.2082672 – volume: 4 year: 2018 ident: 10.1016/j.celrep.2024.114479_bib108 article-title: Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10 publication-title: Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10 – volume: 30 start-page: taad032 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib27 article-title: First case of human infection with highly pathogenic H5 avian Influenza A virus in South America: A new zoonotic pandemic threat for 2023? publication-title: J. Trav. Med. doi: 10.1093/jtm/taad032 – volume: 208 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib52 article-title: An optimized cell-based assay to assess influenza virus replication by measuring neuraminidase activity and its applications for virological surveillance publication-title: Antivir. Res. doi: 10.1016/j.antiviral.2022.105457 – volume: 23 start-page: 633 year: 2017 ident: 10.1016/j.celrep.2024.114479_bib38 article-title: Outbreaks among Wild Birds and Domestic Poultry Caused by Reassorted Influenza A(H5N8) Clade 2.3.4.4 Viruses, Germany, 2016 publication-title: Emerg. Infect. Dis. doi: 10.3201/eid2304.161949 – volume: 10 year: 2014 ident: 10.1016/j.celrep.2024.114479_bib7 article-title: Intrasubtype Reassortments Cause Adaptive Amino Acid Replacements in H3N2 Influenza Genes publication-title: PLoS Genet. doi: 10.1371/journal.pgen.1004037 – volume: 84 start-page: 11831 year: 2010 ident: 10.1016/j.celrep.2024.114479_bib68 article-title: A 27-amino-acid deletion in the neuraminidase stalk supports replication of an avian H2N2 influenza A virus in the respiratory tract of chickens publication-title: J. Virol. doi: 10.1128/JVI.01460-10 – volume: 14 year: 2021 ident: 10.1016/j.celrep.2024.114479_bib53 article-title: Multispecies tracking reveals a major seabird hotspot in the North Atlantic publication-title: Conserv. Lett. doi: 10.1111/conl.12824 – volume: 17 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib35 article-title: No evidence for HPAI H5N1 2.3.4.4b incursion into Australia in 2022 publication-title: Influenza Other Respir. Viruses doi: 10.1111/irv.13118 – volume: 436 start-page: 191 year: 2005 ident: 10.1016/j.celrep.2024.114479_bib13 article-title: Avian flu: H5N1 virus outbreak in migratory waterfowl publication-title: Nature doi: 10.1038/nature03974 – volume: 11 start-page: 346 year: 2019 ident: 10.1016/j.celrep.2024.114479_bib1 article-title: Influenza Hemagglutinin and Neuraminidase: Yin⁻Yang Proteins Coevolving to Thwart Immunity publication-title: Viruses doi: 10.3390/v11040346 – issue: 122 year: 2017 ident: 10.1016/j.celrep.2024.114479_bib51 article-title: Fluorescence-based Neuraminidase Inhibition Assay to Assess the Susceptibility of Influenza Viruses to The Neuraminidase Inhibitor Class of Antivirals publication-title: JoVE doi: 10.3791/55570 – volume: 12 start-page: 1650 year: 2006 ident: 10.1016/j.celrep.2024.114479_bib4 article-title: Anatidae Migration in the Western Palearctic and Spread of Highly Pathogenic Avian Influenza H5N1 Virus publication-title: Emerg. Infect. Dis. doi: 10.3201/eid1211.060223 – volume: 11 year: 2021 ident: 10.1016/j.celrep.2024.114479_bib17 article-title: Pathobiological Origins and Evolutionary History of Highly Pathogenic Avian Influenza Viruses publication-title: Viruses – volume: 13 start-page: 713 year: 2007 ident: 10.1016/j.celrep.2024.114479_bib18 article-title: Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses publication-title: Emerg. Infect. Dis. doi: 10.3201/eid1305.070013 – volume: 87 start-page: 4330 year: 2013 ident: 10.1016/j.celrep.2024.114479_bib8 article-title: Reassortment Complements Spontaneous Mutation in Influenza A Virus NP and M1 Genes To Accelerate Adaptation to a New Host publication-title: J. Virol. doi: 10.1128/JVI.02749-12 – volume: 12 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib30 article-title: Alarming situation of emerging H5 and H7 avian influenza and effective control strategies publication-title: Emerg. Microb. Infect. doi: 10.1080/22221751.2022.2155072 – volume: 22 year: 2017 ident: 10.1016/j.celrep.2024.114479_bib99 – volume: 261 start-page: 15 year: 1999 ident: 10.1016/j.celrep.2024.114479_bib10 article-title: Genetic Characterization of the Pathogenic Influenza A/Goose/Guangdong/1/96 (H5N1) Virus: Similarity of Its Hemagglutinin Gene to Those of H5N1 Viruses from the 1997 Outbreaks in Hong Kong publication-title: Virology doi: 10.1006/viro.1999.9820 – volume: 622 start-page: 810 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib25 article-title: The episodic resurgence of highly pathogenic avian influenza H5 virus publication-title: Nature doi: 10.1038/s41586-023-06631-2 – volume: 87 start-page: 10539 year: 2013 ident: 10.1016/j.celrep.2024.114479_bib74 article-title: The short stalk length of highly pathogenic avian influenza H5N1 virus neuraminidase limits transmission of pandemic H1N1 virus in ferrets publication-title: J. Virol. doi: 10.1128/JVI.00967-13 – volume: 24 year: 2019 ident: 10.1016/j.celrep.2024.114479_bib115 – volume: 37 start-page: 6833 year: 1998 ident: 10.1016/j.celrep.2024.114479_bib77 article-title: The Amino Acid Following an Asn-X-Ser/Thr Sequon Is an Important Determinant of N-Linked Core Glycosylation Efficiency publication-title: Biochemistry doi: 10.1021/bi972217k – volume: 30 start-page: 2811 year: 2014 ident: 10.1016/j.celrep.2024.114479_bib113 article-title: circlize implements and enhances circular visualization in R publication-title: Bioinformatics doi: 10.1093/bioinformatics/btu393 – volume: 5 start-page: 9484 year: 2015 ident: 10.1016/j.celrep.2024.114479_bib19 article-title: Reassortant Highly Pathogenic Influenza A H5N2 Virus Containing Gene Segments Related to Eurasian H5N8 in British Columbia, Canada, 2014 publication-title: Sci. Rep. doi: 10.1038/srep09484 – year: 2023 ident: 10.1016/j.celrep.2024.114479_bib26 – volume: 83 start-page: 4704 year: 2009 ident: 10.1016/j.celrep.2024.114479_bib71 article-title: Neuraminidase Stalk Length and Additional Glycosylation of the Hemagglutinin Influence the Virulence of Influenza H5N1 Viruses for Mice publication-title: J. Virol. doi: 10.1128/JVI.01987-08 – volume: 48 start-page: 7 year: 2017 ident: 10.1016/j.celrep.2024.114479_bib92 article-title: The T160A hemagglutinin substitution affects not only receptor binding property but also transmissibility of H5N1 clade 2.3.4 avian influenza virus in guinea pigs publication-title: Vet. Res. doi: 10.1186/s13567-017-0410-0 – volume: 21 start-page: 842 year: 2015 ident: 10.1016/j.celrep.2024.114479_bib22 article-title: Rapid Emergence of Highly Pathogenic Avian Influenza Subtypes from a Subtype H5N1 Hemagglutinin Variant publication-title: Emerg. Infect. Dis. doi: 10.3201/eid2105.141927 – volume: 7 year: 2017 ident: 10.1016/j.celrep.2024.114479_bib75 article-title: Adaptive mutations of neuraminidase stalk truncation and deglycosylation confer enhanced pathogenicity of influenza A viruses publication-title: Sci. Rep. – volume: 2023 start-page: 1 year: 2023 ident: 10.1016/j.celrep.2024.114479_bib40 article-title: Phylodynamics and Molecular Mutations of the Hemagglutinin Affecting Global Transmission and Host Adaptation of H5Nx Viruses publication-title: Transboundary and Emerging Diseases doi: 10.1155/2023/8855164 – volume: 5 year: 2015 ident: 10.1016/j.celrep.2024.114479_bib72 article-title: The Neuraminidase Stalk Deletion Serves as Major Virulence Determinant of H5N1 Highly Pathogenic Avian Influenza Viruses in Chicken publication-title: Sci. Rep. doi: 10.1038/srep13493 – volume: 28 start-page: 130 year: 2014 ident: 10.1016/j.celrep.2024.114479_bib43 article-title: Avian influenza virus ecology in Iceland shorebirds: Intercontinental reassortment and movement publication-title: Infect. Genet. Evol. doi: 10.1016/j.meegid.2014.09.013 – volume: 58 start-page: 76 year: 2011 ident: 10.1016/j.celrep.2024.114479_bib20 article-title: First Reported Incursion of Highly Pathogenic Notifiable Avian Influenza A H5N1 Viruses from Clade 2.3.2 into European Poultry publication-title: Transbound. Emerg. Dis. doi: 10.1111/j.1865-1682.2010.01175.x – volume: 163 start-page: 247 year: 1988 ident: 10.1016/j.celrep.2024.114479_bib5 article-title: Is the gene pool of influenza viruses in shorebirds and gulls different from that in wild ducks? publication-title: Virology doi: 10.1016/0042-6822(88)90260-7 – volume: 14 year: 2022 ident: 10.1016/j.celrep.2024.114479_bib41 article-title: Analysis of Avian Influenza (H5N5) Viruses Isolated in the Southwestern European Part of the Russian Federation in 2020–2021 publication-title: Viruses doi: 10.3390/v14122725 |
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Snippet | Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a... |
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SubjectTerms | A(H5N5) Animals antiviral susceptibility avian influenza Birds - virology clade 2.3.4.4b contact transmission CP: Microbiology ferret model Ferrets HPAI Humans Influenza A virus - genetics Influenza A virus - pathogenicity Influenza in Birds - transmission Influenza in Birds - virology Mammals - virology North America - epidemiology Orthomyxoviridae Infections - transmission Orthomyxoviridae Infections - virology Phylogeny Sable Island wildlife transmission |
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Title | Multiple transatlantic incursions of highly pathogenic avian influenza clade 2.3.4.4b A(H5N5) virus into North America and spillover to mammals |
URI | https://dx.doi.org/10.1016/j.celrep.2024.114479 https://www.ncbi.nlm.nih.gov/pubmed/39003741 https://www.proquest.com/docview/3080633248 https://pubmed.ncbi.nlm.nih.gov/PMC11305400 https://doaj.org/article/d31d0d3782424576bf9d2577f534adcf |
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