Automatically discriminating and localizing COVID-19 from community-acquired pneumonia on chest X-rays
•We proposed a novel framework, CHP-Net, to differentiate and localize COVID-19 from community acquired pneumonia.•We used excessive data augmentation to extend the available dataset and optimize the CHP-Net generalization capability.•Comparing to other ConvNet, CHP-Net works much more efficiently t...
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Published in | Pattern recognition Vol. 110; p. 107613 |
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Main Authors | , , , , , , |
Format | Journal Article |
Language | English |
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England
Elsevier Ltd
01.02.2021
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Subjects | |
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Abstract | •We proposed a novel framework, CHP-Net, to differentiate and localize COVID-19 from community acquired pneumonia.•We used excessive data augmentation to extend the available dataset and optimize the CHP-Net generalization capability.•Comparing to other ConvNet, CHP-Net works much more efficiently to extract feature information on chest X-Ray.•All metrics, including categorical loss, accuracy, precision, recall and F1-score, proved CHP-Net fits good for the task.•CHP-Net are better than the previous methods tested in detecting COVID-19 and exceeding to radiologist.
The COVID-19 outbreak continues to threaten the health and life of people worldwide. It is an immediate priority to develop and test a computer-aided detection (CAD) scheme based on deep learning (DL) to automatically localize and differentiate COVID-19 from community-acquired pneumonia (CAP) on chest X-rays. Therefore, this study aims to develop and test an efficient and accurate deep learning scheme that assists radiologists in automatically recognizing and localizing COVID-19. A retrospective chest X-ray image dataset was collected from open image data and the Xiangya Hospital, which was divided into a training group and a testing group. The proposed CAD framework is composed of two steps with DLs: the Discrimination-DL and the Localization-DL. The first DL was developed to extract lung features from chest X-ray radiographs for COVID-19 discrimination and trained using 3548 chest X-ray radiographs. The second DL was trained with 406-pixel patches and applied to the recognized X-ray radiographs to localize and assign them into the left lung, right lung or bipulmonary. X-ray radiographs of CAP and healthy controls were enrolled to evaluate the robustness of the model. Compared to the radiologists’ discrimination and localization results, the accuracy of COVID-19 discrimination using the Discrimination-DL yielded 98.71%, while the accuracy of localization using the Localization-DL was 93.03%. This work represents the feasibility of using a novel deep learning-based CAD scheme to efficiently and accurately distinguish COVID-19 from CAP and detect localization with high accuracy and agreement with radiologists. |
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AbstractList | The COVID-19 outbreak continues to threaten the health and life of people worldwide. It is an immediate priority to develop and test a computer-aided detection (CAD) scheme based on deep learning (DL) to automatically localize and differentiate COVID-19 from community-acquired pneumonia (CAP) on chest X-rays. Therefore, this study aims to develop and test an efficient and accurate deep learning scheme that assists radiologists in automatically recognizing and localizing COVID-19. A retrospective chest X-ray image dataset was collected from open image data and the Xiangya Hospital, which was divided into a training group and a testing group. The proposed CAD framework is composed of two steps with DLs: the Discrimination-DL and the Localization-DL. The first DL was developed to extract lung features from chest X-ray radiographs for COVID-19 discrimination and trained using 3548 chest X-ray radiographs. The second DL was trained with 406-pixel patches and applied to the recognized X-ray radiographs to localize and assign them into the left lung, right lung or bipulmonary. X-ray radiographs of CAP and healthy controls were enrolled to evaluate the robustness of the model. Compared to the radiologists' discrimination and localization results, the accuracy of COVID-19 discrimination using the Discrimination-DL yielded 98.71%, while the accuracy of localization using the Localization-DL was 93.03%. This work represents the feasibility of using a novel deep learning-based CAD scheme to efficiently and accurately distinguish COVID-19 from CAP and detect localization with high accuracy and agreement with radiologists. • We proposed a novel framework, CHP-Net, to differentiate and localize COVID-19 from community acquired pneumonia. • We used excessive data augmentation to extend the available dataset and optimize the CHP-Net generalization capability. • Comparing to other ConvNet, CHP-Net works much more efficiently to extract feature information on chest X-Ray. • All metrics, including categorical loss, accuracy, precision, recall and F1-score, proved CHP-Net fits good for the task. • CHP-Net are better than the previous methods tested in detecting COVID-19 and exceeding to radiologist. The COVID-19 outbreak continues to threaten the health and life of people worldwide. It is an immediate priority to develop and test a computer-aided detection (CAD) scheme based on deep learning (DL) to automatically localize and differentiate COVID-19 from community-acquired pneumonia (CAP) on chest X-rays. Therefore, this study aims to develop and test an efficient and accurate deep learning scheme that assists radiologists in automatically recognizing and localizing COVID-19. A retrospective chest X-ray image dataset was collected from open image data and the Xiangya Hospital, which was divided into a training group and a testing group. The proposed CAD framework is composed of two steps with DLs: the Discrimination-DL and the Localization-DL. The first DL was developed to extract lung features from chest X-ray radiographs for COVID-19 discrimination and trained using 3548 chest X-ray radiographs. The second DL was trained with 406-pixel patches and applied to the recognized X-ray radiographs to localize and assign them into the left lung, right lung or bipulmonary. X-ray radiographs of CAP and healthy controls were enrolled to evaluate the robustness of the model. Compared to the radiologists’ discrimination and localization results, the accuracy of COVID-19 discrimination using the Discrimination-DL yielded 98.71%, while the accuracy of localization using the Localization-DL was 93.03%. This work represents the feasibility of using a novel deep learning-based CAD scheme to efficiently and accurately distinguish COVID-19 from CAP and detect localization with high accuracy and agreement with radiologists. The COVID-19 outbreak continues to threaten the health and life of people worldwide. It is an immediate priority to develop and test a computer-aided detection (CAD) scheme based on deep learning (DL) to automatically localize and differentiate COVID-19 from community-acquired pneumonia (CAP) on chest X-rays. Therefore, this study aims to develop and test an efficient and accurate deep learning scheme that assists radiologists in automatically recognizing and localizing COVID-19. A retrospective chest X-ray image dataset was collected from open image data and the Xiangya Hospital, which was divided into a training group and a testing group. The proposed CAD framework is composed of two steps with DLs: the Discrimination-DL and the Localization-DL. The first DL was developed to extract lung features from chest X-ray radiographs for COVID-19 discrimination and trained using 3548 chest X-ray radiographs. The second DL was trained with 406-pixel patches and applied to the recognized X-ray radiographs to localize and assign them into the left lung, right lung or bipulmonary. X-ray radiographs of CAP and healthy controls were enrolled to evaluate the robustness of the model. Compared to the radiologists' discrimination and localization results, the accuracy of COVID-19 discrimination using the Discrimination-DL yielded 98.71%, while the accuracy of localization using the Localization-DL was 93.03%. This work represents the feasibility of using a novel deep learning-based CAD scheme to efficiently and accurately distinguish COVID-19 from CAP and detect localization with high accuracy and agreement with radiologists.The COVID-19 outbreak continues to threaten the health and life of people worldwide. It is an immediate priority to develop and test a computer-aided detection (CAD) scheme based on deep learning (DL) to automatically localize and differentiate COVID-19 from community-acquired pneumonia (CAP) on chest X-rays. Therefore, this study aims to develop and test an efficient and accurate deep learning scheme that assists radiologists in automatically recognizing and localizing COVID-19. A retrospective chest X-ray image dataset was collected from open image data and the Xiangya Hospital, which was divided into a training group and a testing group. The proposed CAD framework is composed of two steps with DLs: the Discrimination-DL and the Localization-DL. The first DL was developed to extract lung features from chest X-ray radiographs for COVID-19 discrimination and trained using 3548 chest X-ray radiographs. The second DL was trained with 406-pixel patches and applied to the recognized X-ray radiographs to localize and assign them into the left lung, right lung or bipulmonary. X-ray radiographs of CAP and healthy controls were enrolled to evaluate the robustness of the model. Compared to the radiologists' discrimination and localization results, the accuracy of COVID-19 discrimination using the Discrimination-DL yielded 98.71%, while the accuracy of localization using the Localization-DL was 93.03%. This work represents the feasibility of using a novel deep learning-based CAD scheme to efficiently and accurately distinguish COVID-19 from CAP and detect localization with high accuracy and agreement with radiologists. •We proposed a novel framework, CHP-Net, to differentiate and localize COVID-19 from community acquired pneumonia.•We used excessive data augmentation to extend the available dataset and optimize the CHP-Net generalization capability.•Comparing to other ConvNet, CHP-Net works much more efficiently to extract feature information on chest X-Ray.•All metrics, including categorical loss, accuracy, precision, recall and F1-score, proved CHP-Net fits good for the task.•CHP-Net are better than the previous methods tested in detecting COVID-19 and exceeding to radiologist. The COVID-19 outbreak continues to threaten the health and life of people worldwide. It is an immediate priority to develop and test a computer-aided detection (CAD) scheme based on deep learning (DL) to automatically localize and differentiate COVID-19 from community-acquired pneumonia (CAP) on chest X-rays. Therefore, this study aims to develop and test an efficient and accurate deep learning scheme that assists radiologists in automatically recognizing and localizing COVID-19. A retrospective chest X-ray image dataset was collected from open image data and the Xiangya Hospital, which was divided into a training group and a testing group. The proposed CAD framework is composed of two steps with DLs: the Discrimination-DL and the Localization-DL. The first DL was developed to extract lung features from chest X-ray radiographs for COVID-19 discrimination and trained using 3548 chest X-ray radiographs. The second DL was trained with 406-pixel patches and applied to the recognized X-ray radiographs to localize and assign them into the left lung, right lung or bipulmonary. X-ray radiographs of CAP and healthy controls were enrolled to evaluate the robustness of the model. Compared to the radiologists’ discrimination and localization results, the accuracy of COVID-19 discrimination using the Discrimination-DL yielded 98.71%, while the accuracy of localization using the Localization-DL was 93.03%. This work represents the feasibility of using a novel deep learning-based CAD scheme to efficiently and accurately distinguish COVID-19 from CAP and detect localization with high accuracy and agreement with radiologists. |
ArticleNumber | 107613 |
Author | Liu, Xiaowei Xiao, Ying Hou, Muzhou Wang, Zheng Lu, Fanggen Li, Yong Zhang, Jie |
Author_xml | – sequence: 1 givenname: Zheng surname: Wang fullname: Wang, Zheng organization: School of Mathematics and Statistics, Central South University, Changsha 410083, China – sequence: 2 givenname: Ying surname: Xiao fullname: Xiao, Ying organization: Department of Gastroenterology of Xiangya hospital, Central South University, Changsha 410008, China – sequence: 3 givenname: Yong surname: Li fullname: Li, Yong organization: Department of Gastroenterology of Xiangya hospital, Central South University, Changsha 410008, China – sequence: 4 givenname: Jie surname: Zhang fullname: Zhang, Jie organization: The Second Xiangya Hospital, Central South University, Changsha 410083, China – sequence: 5 givenname: Fanggen surname: Lu fullname: Lu, Fanggen organization: The Second Xiangya Hospital, Central South University, Changsha 410083, China – sequence: 6 givenname: Muzhou orcidid: 0000-0001-6658-2187 surname: Hou fullname: Hou, Muzhou email: houmuzhou@sina.com organization: School of Mathematics and Statistics, Central South University, Changsha 410083, China – sequence: 7 givenname: Xiaowei surname: Liu fullname: Liu, Xiaowei email: liuxw@csu.edu.cn organization: Department of Gastroenterology of Xiangya hospital, Central South University, Changsha 410008, China |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/32868956$$D View this record in MEDLINE/PubMed |
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Keywords | COVID-19 Computer-aided detection (CAD) Community-acquired pneumonia (CAP) Deep learning (DL) Chest X-ray (CXR) |
Language | English |
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Snippet | •We proposed a novel framework, CHP-Net, to differentiate and localize COVID-19 from community acquired pneumonia.•We used excessive data augmentation to... The COVID-19 outbreak continues to threaten the health and life of people worldwide. It is an immediate priority to develop and test a computer-aided detection... • We proposed a novel framework, CHP-Net, to differentiate and localize COVID-19 from community acquired pneumonia. • We used excessive data augmentation to... |
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SubjectTerms | Chest X-ray (CXR) Community-acquired pneumonia (CAP) Computer-aided detection (CAD) COVID-19 Deep learning (DL) |
Title | Automatically discriminating and localizing COVID-19 from community-acquired pneumonia on chest X-rays |
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