Nemertean and phoronid genomes reveal lophotrochozoan evolution and the origin of bilaterian heads
Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans—a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understanding of bilaterian evolution. However, given the inconsistency...
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Published in | Nature ecology & evolution Vol. 2; no. 1; pp. 141 - 151 |
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Main Authors | , , , , , , , |
Format | Journal Article |
Language | English |
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Nature Publishing Group UK
01.01.2018
Nature Publishing Group |
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Abstract | Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans—a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understanding of bilaterian evolution. However, given the inconsistency of molecular and morphological data for these groups, their origins have been unclear. Here, we present draft genomes of the nemertean
Notospermus geniculatus
and the phoronid
Phoronis australis
, together with transcriptomes along the adult bodies. Our genome-based phylogenetic analyses place Nemertea sister to the group containing Phoronida and Brachiopoda. We show that lophotrochozoans share many gene families with deuterostomes, suggesting that these two groups retain a core bilaterian gene repertoire that ecdysozoans (for example, flies and nematodes) and platyzoans (for example, flatworms and rotifers) do not. Comparative transcriptomics demonstrates that lophophores of phoronids and brachiopods are similar not only morphologically, but also at the molecular level. Despite dissimilar head structures, lophophores express vertebrate head and neuronal marker genes. This finding suggests a common origin of bilaterian head patterning, although different heads evolved independently in each lineage. Furthermore, we observe lineage-specific expansions of innate immunity and toxin-related genes. Together, our study reveals a dual nature of lophotrochozoans, where conserved and lineage-specific features shape their evolution.
The authors sequence genomes of one nemertean and one phoronid and show that the two are closely related lophotrochozoans. Their data also support a common origin of bilaterian head patterning. |
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AbstractList | Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans-a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understanding of bilaterian evolution. However, given the inconsistency of molecular and morphological data for these groups, their origins have been unclear. Here, we present draft genomes of the nemertean Notospermus geniculatus and the phoronid Phoronis australis, together with transcriptomes along the adult bodies. Our genome-based phylogenetic analyses place Nemertea sister to the group containing Phoronida and Brachiopoda. We show that lophotrochozoans share many gene families with deuterostomes, suggesting that these two groups retain a core bilaterian gene repertoire that ecdysozoans (for example, flies and nematodes) and platyzoans (for example, flatworms and rotifers) do not. Comparative transcriptomics demonstrates that lophophores of phoronids and brachiopods are similar not only morphologically, but also at the molecular level. Despite dissimilar head structures, lophophores express vertebrate head and neuronal marker genes. This finding suggests a common origin of bilaterian head patterning, although different heads evolved independently in each lineage. Furthermore, we observe lineage-specific expansions of innate immunity and toxin-related genes. Together, our study reveals a dual nature of lophotrochozoans, where conserved and lineage-specific features shape their evolution. Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans—a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understanding of bilaterian evolution. However, given the inconsistency of molecular and morphological data for these groups, their origins have been unclear. Here, we present draft genomes of the nemertean Notospermus geniculatus and the phoronid Phoronis australis , together with transcriptomes along the adult bodies. Our genome-based phylogenetic analyses place Nemertea sister to the group containing Phoronida and Brachiopoda. We show that lophotrochozoans share many gene families with deuterostomes, suggesting that these two groups retain a core bilaterian gene repertoire that ecdysozoans (for example, flies and nematodes) and platyzoans (for example, flatworms and rotifers) do not. Comparative transcriptomics demonstrates that lophophores of phoronids and brachiopods are similar not only morphologically, but also at the molecular level. Despite dissimilar head structures, lophophores express vertebrate head and neuronal marker genes. This finding suggests a common origin of bilaterian head patterning, although different heads evolved independently in each lineage. Furthermore, we observe lineage-specific expansions of innate immunity and toxin-related genes. Together, our study reveals a dual nature of lophotrochozoans, where conserved and lineage-specific features shape their evolution. The authors sequence genomes of one nemertean and one phoronid and show that the two are closely related lophotrochozoans. Their data also support a common origin of bilaterian head patterning. Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans—a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understanding of bilaterian evolution. However, given the inconsistency of molecular and morphological data for these groups, their origins have been unclear. Here, we present draft genomes of the nemertean Notospermus geniculatus and the phoronid Phoronis australis , together with transcriptomes along the adult bodies. Our genome-based phylogenetic analyses place Nemertea sister to the group containing Phoronida and Brachiopoda. We show that lophotrochozoans share many gene families with deuterostomes, suggesting that these two groups retain a core bilaterian gene repertoire that ecdysozoans (for example, flies and nematodes) and platyzoans (for example, flatworms and rotifers) do not. Comparative transcriptomics demonstrates that lophophores of phoronids and brachiopods are similar not only morphologically, but also at the molecular level. Despite dissimilar head structures, lophophores express vertebrate head and neuronal marker genes. This finding suggests a common origin of bilaterian head patterning, although different heads evolved independently in each lineage. Furthermore, we observe lineage-specific expansions of innate immunity and toxin-related genes. Together, our study reveals a dual nature of lophotrochozoans, where conserved and lineage-specific features shape their evolution. Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans-a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understanding of bilaterian evolution. However, given the inconsistency of molecular and morphological data for these groups, their origins have been unclear. Here, we present draft genomes of the nemertean Notospermus geniculatus and the phoronid Phoronis australis, together with transcriptomes along the adult bodies. Our genome-based phylogenetic analyses place Nemertea sister to the group containing Phoronida and Brachiopoda. We show that lophotrochozoans share many gene families with deuterostomes, suggesting that these two groups retain a core bilaterian gene repertoire that ecdysozoans (for example, flies and nematodes) and platyzoans (for example, flatworms and rotifers) do not. Comparative transcriptomics demonstrates that lophophores of phoronids and brachiopods are similar not only morphologically, but also at the molecular level. Despite dissimilar head structures, lophophores express vertebrate head and neuronal marker genes. This finding suggests a common origin of bilaterian head patterning, although different heads evolved independently in each lineage. Furthermore, we observe lineage-specific expansions of innate immunity and toxin-related genes. Together, our study reveals a dual nature of lophotrochozoans, where conserved and lineage-specific features shape their evolution.Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans-a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understanding of bilaterian evolution. However, given the inconsistency of molecular and morphological data for these groups, their origins have been unclear. Here, we present draft genomes of the nemertean Notospermus geniculatus and the phoronid Phoronis australis, together with transcriptomes along the adult bodies. Our genome-based phylogenetic analyses place Nemertea sister to the group containing Phoronida and Brachiopoda. We show that lophotrochozoans share many gene families with deuterostomes, suggesting that these two groups retain a core bilaterian gene repertoire that ecdysozoans (for example, flies and nematodes) and platyzoans (for example, flatworms and rotifers) do not. Comparative transcriptomics demonstrates that lophophores of phoronids and brachiopods are similar not only morphologically, but also at the molecular level. Despite dissimilar head structures, lophophores express vertebrate head and neuronal marker genes. This finding suggests a common origin of bilaterian head patterning, although different heads evolved independently in each lineage. Furthermore, we observe lineage-specific expansions of innate immunity and toxin-related genes. Together, our study reveals a dual nature of lophotrochozoans, where conserved and lineage-specific features shape their evolution. Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans—a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understanding of bilaterian evolution. However, given the inconsistency of molecular and morphological data for these groups, their origins have been unclear. Here, we present draft genomes of the nemertean Notospermus geniculatus and the phoronid Phoronis australis, together with transcriptomes along the adult bodies. Our genome-based phylogenetic analyses place Nemertea sister to the group containing Phoronida and Brachiopoda. We show that lophotrochozoans share many gene families with deuterostomes, suggesting that these two groups retain a core bilaterian gene repertoire that ecdysozoans (for example, flies and nematodes) and platyzoans (for example, flatworms and rotifers) do not. Comparative transcriptomics demonstrates that lophophores of phoronids and brachiopods are similar not only morphologically, but also at the molecular level. Despite dissimilar head structures, lophophores express vertebrate head and neuronal marker genes. This finding suggests a common origin of bilaterian head patterning, although different heads evolved independently in each lineage. Furthermore, we observe lineage-specific expansions of innate immunity and toxin-related genes. Together, our study reveals a dual nature of lophotrochozoans, where conserved and lineage-specific features shape their evolution.The authors sequence genomes of one nemertean and one phoronid and show that the two are closely related lophotrochozoans. Their data also support a common origin of bilaterian head patterning. |
Author | Sakamoto, Hirotaka Luo, Yi-Jyun Hisata, Kanako Satoh, Noriyuki Kanda, Miyuki Koyanagi, Ryo Akiyama, Tadashi Sakamoto, Tatsuya |
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BackLink | https://www.ncbi.nlm.nih.gov/pubmed/29203924$$D View this record in MEDLINE/PubMed |
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Cites_doi | 10.1038/nature16520 10.1093/bioinformatics/btr011 10.1093/bioinformatics/btl097 10.1093/molbev/msp150 10.1126/science.1206375 10.1186/s12862-016-0744-7 10.1038/nrg1726 10.1016/j.ydbio.2006.04.457 10.1093/bioinformatics/btp348 10.1016/j.cub.2012.09.036 10.1038/srep04682 10.1038/nature14434 10.1007/s00427-011-0370-8 10.1038/nature09201 10.1186/2041-9139-3-3 10.1016/j.ympev.2013.09.011 10.1038/nature06614 10.1073/pnas.1614501114 10.1186/2041-9139-1-14 10.1093/bioinformatics/btm071 10.1101/gr.133652.111 10.1093/bioinformatics/btq683 10.1038/nature11696 10.1038/35100529 10.1038/39092 10.1101/gr.170720.113 10.1038/ncomms1248 10.1186/s12915-015-0133-5 10.1086/BBLv227n2p201 10.1038/srep06534 10.1186/1471-2105-15-211 10.1038/nprot.2013.084 10.1093/gbe/evu258 10.1371/journal.pone.0004004 10.1242/dev.129.5.1225 10.1038/ng.2007.51 10.1093/gbe/evv074 10.1093/bioinformatics/btp368 10.1038/nature20804 10.1038/ncomms9301 10.7554/eLife.20062 10.1093/bioinformatics/btn013 10.1126/science.1139158 10.1038/nature11413 10.1186/s40851-016-0039-2 10.4137/EBO.S14239 10.1016/j.cub.2015.03.034 10.1186/1471-2105-12-323 10.1093/bioinformatics/btu033 10.1186/1471-2148-13-253 10.1093/nar/gkf436 10.1093/molbev/msu080 10.1038/nature07603 10.1038/21631 10.1038/srep08693 10.1038/nrm3470 10.1186/1471-2148-9-157 10.1038/nature10838 10.1093/bioinformatics/bti1018 10.1038/nmeth.1923 10.1016/j.cub.2016.10.047 10.1038/s41467-017-00020-w 10.1038/nature16150 10.1038/nrm3434 10.1371/journal.pone.0123040 10.1016/j.cell.2009.11.035 10.1073/pnas.1507622112 10.1016/j.ympev.2009.12.022 10.1038/nature12130 10.1016/S0021-9258(17)30331-9 10.1016/j.cub.2015.06.068 10.1038/nature14000 10.1038/nature14668 |
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References | Takeuchi (CR18) 2016; 2 Egger (CR20) 2015; 25 Temereva, Kosevich (CR42) 2016; 16 Zhang (CR8) 2015; 5 Pearson, Lemons, McGinnis (CR31) 2005; 6 Jandzik (CR56) 2015; 518 Gonzalez, Uhlinger, Lowe (CR38) 2016; 27 Hughes, Kaufman (CR39) 2002; 129 Fröbius, Matus, Seaver (CR41) 2008; 3 Wong (CR21) 2014; 4 Appeltans (CR1) 2012; 22 Grande, Patel (CR6) 2009; 457 Salichos, Rokas (CR22) 2013; 497 Petersen, Reddien (CR45) 2009; 139 Steinmetz (CR47) 2010; 1 Zhang (CR10) 2012; 490 Helmkampf, Bruchhaus, Hausdorf (CR12) 2008; 275 Paps, Baguna, Riutort (CR13) 2009; 26 Langmead, Salzberg (CR64) 2012; 9 Huang (CR60) 2012; 22 Price, Jones, Pevzner (CR66) 2005; 21 Fischer (CR68) 2011; 12 Lowe, Clarke, Medeiros, Rokhsar, Gerhart (CR48) 2015; 520 Nesnidal (CR4) 2013; 13 Lartillot, Lepage, Blanquart (CR75) 2009; 25 Putnam (CR23) 2007; 317 Dunn (CR3) 2008; 452 Pani (CR49) 2012; 483 Katoh, Misawa, Kuma, Miyata (CR72) 2002; 30 Zhang (CR34) 2014; 4 Laumer (CR5) 2015; 25 Whelan, Kocot, Santos, Halanych (CR19) 2014; 6 Temereva, Tsitrin (CR43) 2015; 10 Kocot (CR16) 2017; 66 Halanych, Kocot (CR7) 2014; 227 Kem, Blumenthal (CR53) 1978; 253 Simakov (CR9) 2013; 493 Sekita (CR30) 2008; 40 Irie, Kuratani (CR44) 2011; 2 Kuck, Struck (CR76) 2014; 70 Massague (CR25) 2012; 13 Moysiuk, Smith, Caron (CR33) 2017; 541 De Rosa (CR35) 1999; 399 Santagata, Resh, Hejnol, Martindale, Passamaneck (CR50) 2012; 3 Albertin (CR17) 2015; 524 Luo (CR11) 2015; 6 Jackson (CR54) 2015; 7 Stamatakis (CR74) 2014; 30 Glinka, Wu, Onichtchouk, Blumenstock, Niehrs (CR46) 1997; 389 Hiebert, Maslakova (CR40) 2015; 13 De Bie, Cristianini, Demuth, Hahn (CR69) 2006; 22 Cannon (CR2) 2016; 530 Capella-Gutiérrez, Silla-Martínez, Gabaldón (CR73) 2009; 25 Simakov (CR27) 2015; 527 Kao (CR29) 2016; 5 Struck (CR71) 2014; 10 Ebersberger, Strauss, von Haeseler (CR70) 2009; 9 Weigert (CR15) 2014; 31 Boetzer, Pirovano (CR59) 2014; 15 Haas (CR63) 2013; 8 Boetzer, Henkel, Jansen, Butler, Pirovano (CR58) 2011; 27 Riddiford, Olson (CR28) 2011; 221 Erwin (CR55) 2011; 334 Marçais, Kingsford (CR61) 2011; 27 Schubert, Holland, Laudet, Holland (CR37) 2006; 296 Kajitani (CR57) 2014; 24 Niehrs (CR26) 2012; 13 Hausdorf, Helmkampf, Nesnidal, Bruchhaus (CR14) 2010; 55 Li, Dewey (CR65) 2011; 12 Srivastava (CR24) 2010; 466 Schiemann (CR32) 2017; 114 Parra, Bradnam, Korf (CR62) 2007; 23 Fröbius, Funch (CR36) 2017; 8 Medzhitov (CR51) 2001; 1 Ellisdon (CR52) 2015; 112 Stanke, Diekhans, Baertsch, Haussler (CR67) 2008; 24 ZF Zhang (389_CR34) 2014; 4 M Boetzer (389_CR58) 2011; 27 G Zhang (389_CR10) 2012; 490 N Riddiford (389_CR28) 2011; 221 AC Fröbius (389_CR36) 2017; 8 EN Temereva (389_CR43) 2015; 10 KM Kocot (389_CR16) 2017; 66 CJ Lowe (389_CR48) 2015; 520 B Langmead (389_CR64) 2012; 9 R Medzhitov (389_CR51) 2001; 1 A Stamatakis (389_CR74) 2014; 30 O Simakov (389_CR27) 2015; 527 LS Hiebert (389_CR40) 2015; 13 M Boetzer (389_CR59) 2014; 15 J Moysiuk (389_CR33) 2017; 541 R Kajitani (389_CR57) 2014; 24 L Zhang (389_CR8) 2015; 5 DH Erwin (389_CR55) 2011; 334 W Appeltans (389_CR1) 2012; 22 EN Temereva (389_CR42) 2016; 16 G Marçais (389_CR61) 2011; 27 B Egger (389_CR20) 2015; 25 NV Whelan (389_CR19) 2014; 6 N Lartillot (389_CR75) 2009; 25 T Takeuchi (389_CR18) 2016; 2 L Salichos (389_CR22) 2013; 497 AM Ellisdon (389_CR52) 2015; 112 PRH Steinmetz (389_CR47) 2010; 1 CW Dunn (389_CR3) 2008; 452 CE Laumer (389_CR5) 2015; 25 MP Nesnidal (389_CR4) 2013; 13 Y Sekita (389_CR30) 2008; 40 BJ Haas (389_CR63) 2013; 8 K Katoh (389_CR72) 2002; 30 YJ Luo (389_CR11) 2015; 6 CB Albertin (389_CR17) 2015; 524 C Niehrs (389_CR26) 2012; 13 A Glinka (389_CR46) 1997; 389 CP Petersen (389_CR45) 2009; 139 C Grande (389_CR6) 2009; 457 YH Wong (389_CR21) 2014; 4 S Capella-Gutiérrez (389_CR73) 2009; 25 S Huang (389_CR60) 2012; 22 CL Hughes (389_CR39) 2002; 129 G Parra (389_CR62) 2007; 23 TH Struck (389_CR71) 2014; 10 B Li (389_CR65) 2011; 12 M Schubert (389_CR37) 2006; 296 NH Putnam (389_CR23) 2007; 317 I Ebersberger (389_CR70) 2009; 9 J Paps (389_CR13) 2009; 26 S Santagata (389_CR50) 2012; 3 B Hausdorf (389_CR14) 2010; 55 KM Halanych (389_CR7) 2014; 227 JT Cannon (389_CR2) 2016; 530 M Helmkampf (389_CR12) 2008; 275 WR Kem (389_CR53) 1978; 253 AM Pani (389_CR49) 2012; 483 M Stanke (389_CR67) 2008; 24 M Srivastava (389_CR24) 2010; 466 A Weigert (389_CR15) 2014; 31 J Massague (389_CR25) 2012; 13 AL Price (389_CR66) 2005; 21 R De Rosa (389_CR35) 1999; 399 AC Fröbius (389_CR41) 2008; 3 SM Schiemann (389_CR32) 2017; 114 P Kuck (389_CR76) 2014; 70 T De Bie (389_CR69) 2006; 22 N Irie (389_CR44) 2011; 2 DJ Jackson (389_CR54) 2015; 7 O Simakov (389_CR9) 2013; 493 D Kao (389_CR29) 2016; 5 P Gonzalez (389_CR38) 2016; 27 S Fischer (389_CR68) 2011; 12 D Jandzik (389_CR56) 2015; 518 JC Pearson (389_CR31) 2005; 6 |
References_xml | – volume: 530 start-page: 89 year: 2016 end-page: 93 ident: CR2 article-title: Xenacoelomorpha is the sister group to Nephrozoa publication-title: Nature doi: 10.1038/nature16520 – volume: 27 start-page: 764 year: 2011 end-page: 770 ident: CR61 article-title: A fast, lock-free approach for efficient parallel counting of occurrences of -mers publication-title: Bioinformatics doi: 10.1093/bioinformatics/btr011 – volume: 22 start-page: 1269 year: 2006 end-page: 1271 ident: CR69 article-title: CAFE: a computational tool for the study of gene family evolution publication-title: Bioinformatics doi: 10.1093/bioinformatics/btl097 – volume: 26 start-page: 2397 year: 2009 end-page: 2406 ident: CR13 article-title: Bilaterian phylogeny: a broad sampling of 13 nuclear genes provides a new Lophotrochozoa phylogeny and supports a paraphyletic basal acoelomorpha publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msp150 – volume: 334 start-page: 1091 year: 2011 end-page: 1097 ident: CR55 article-title: The Cambrian conundrum: early divergence and later ecological success in the early history of animals publication-title: Science doi: 10.1126/science.1206375 – volume: 16 year: 2016 ident: CR42 article-title: The nervous system of the lophophore in the ctenostome provides insight into the morphology of ancestral ectoprocts and the monophyly of the lophophorates publication-title: BMC Evol. Biol. doi: 10.1186/s12862-016-0744-7 – volume: 6 start-page: 893 year: 2005 end-page: 904 ident: CR31 article-title: Modulating Hox gene functions during animal body patterning publication-title: Nat. Rev. Genet. doi: 10.1038/nrg1726 – volume: 296 start-page: 190 year: 2006 end-page: 202 ident: CR37 article-title: A retinoic acid-Hox hierarchy controls both anterior/posterior patterning and neuronal specification in the developing central nervous system of the cephalochordate amphioxus publication-title: Dev. Biol. doi: 10.1016/j.ydbio.2006.04.457 – volume: 25 start-page: 1972 year: 2009 end-page: 1973 ident: CR73 article-title: trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses publication-title: Bioinformatics doi: 10.1093/bioinformatics/btp348 – volume: 22 start-page: 2189 year: 2012 end-page: 2202 ident: CR1 article-title: The magnitude of global marine species diversity publication-title: Curr. Biol. doi: 10.1016/j.cub.2012.09.036 – volume: 4 year: 2014 ident: CR34 article-title: An early Cambrian agglutinated tubular lophophorate with brachiopod characters publication-title: Sci. Rep. doi: 10.1038/srep04682 – volume: 520 start-page: 456 year: 2015 end-page: 465 ident: CR48 article-title: The deuterostome context of chordate origins publication-title: Nature doi: 10.1038/nature14434 – volume: 221 start-page: 187 year: 2011 end-page: 197 ident: CR28 article-title: Wnt gene loss in flatworms publication-title: Dev. Genes Evol. doi: 10.1007/s00427-011-0370-8 – volume: 466 start-page: 720 year: 2010 end-page: 726 ident: CR24 article-title: The genome and the evolution of animal complexity publication-title: Nature doi: 10.1038/nature09201 – volume: 3 year: 2012 ident: CR50 article-title: Development of the larval anterior neurogenic domains of (Brachiopoda) provides insights into the diversification of larval apical organs and the spiralian nervous system publication-title: EvoDevo doi: 10.1186/2041-9139-3-3 – volume: 70 start-page: 94 year: 2014 end-page: 98 ident: CR76 article-title: BaCoCa—a heuristic software tool for the parallel assessment of sequence biases in hundreds of gene and taxon partitions publication-title: Mol. Phylogenet. Evol. doi: 10.1016/j.ympev.2013.09.011 – volume: 452 start-page: 745 year: 2008 end-page: 749 ident: CR3 article-title: Broad phylogenomic sampling improves resolution of the animal tree of life publication-title: Nature doi: 10.1038/nature06614 – volume: 114 start-page: E1913 year: 2017 end-page: E1922 ident: CR32 article-title: Clustered brachiopod Hox genes are not expressed collinearly and are associated with lophotrochozoan novelties publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1614501114 – volume: 1 year: 2010 ident: CR47 article-title: demarcates the anterior-most developing brain region in bilaterian animals publication-title: EvoDevo doi: 10.1186/2041-9139-1-14 – volume: 23 start-page: 1061 year: 2007 end-page: 1067 ident: CR62 article-title: CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes publication-title: Bioinformatics doi: 10.1093/bioinformatics/btm071 – volume: 275 start-page: 1927 year: 2008 end-page: 1933 ident: CR12 article-title: Phylogenomic analyses of lophophorates (brachiopods, phoronids and bryozoans) confirm the Lophotrochozoa concept publication-title: Proc. Biol. Sci. – volume: 22 start-page: 1581 year: 2012 end-page: 1588 ident: CR60 article-title: HaploMerger: reconstructing allelic relationships for polymorphic diploid genome assemblies publication-title: Genome Res. doi: 10.1101/gr.133652.111 – volume: 27 start-page: 578 year: 2011 end-page: 579 ident: CR58 article-title: Scaffolding pre-assembled contigs using SSPACE publication-title: Bioinformatics doi: 10.1093/bioinformatics/btq683 – volume: 493 start-page: 526 year: 2013 end-page: 531 ident: CR9 article-title: Insights into bilaterian evolution from three spiralian genomes publication-title: Nature doi: 10.1038/nature11696 – volume: 1 start-page: 135 year: 2001 end-page: 145 ident: CR51 article-title: Toll-like receptors and innate immunity publication-title: Nat. Rev. Immunol. doi: 10.1038/35100529 – volume: 389 start-page: 517 year: 1997 end-page: 519 ident: CR46 article-title: Head induction by simultaneous repression of Bmp and Wnt signalling in publication-title: Nature doi: 10.1038/39092 – volume: 24 start-page: 1384 year: 2014 end-page: 1395 ident: CR57 article-title: Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads publication-title: Genome Res. doi: 10.1101/gr.170720.113 – volume: 2 year: 2011 ident: CR44 article-title: Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis publication-title: Nat. Commun. doi: 10.1038/ncomms1248 – volume: 13 year: 2015 ident: CR40 article-title: Hox genes pattern the anterior–posterior axis of the juvenile but not the larva in a maximally indirect developing invertebrate, (Nemertea) publication-title: BMC Biol. doi: 10.1186/s12915-015-0133-5 – volume: 227 start-page: 201 year: 2014 end-page: 209 ident: CR7 article-title: Repurposed transcriptomic data facilitate discovery of innate immunity toll-like receptor (TLR) genes across Lophotrochozoa publication-title: Biol. Bull. doi: 10.1086/BBLv227n2p201 – volume: 4 year: 2014 ident: CR21 article-title: Transcriptome analysis elucidates key developmental components of bryozoan lophophore development publication-title: Sci. Rep. doi: 10.1038/srep06534 – volume: 15 year: 2014 ident: CR59 article-title: SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information publication-title: BMC Bioinformatics doi: 10.1186/1471-2105-15-211 – volume: 8 start-page: 1494 year: 2013 end-page: 1512 ident: CR63 article-title: De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis publication-title: Nat. Protoc. doi: 10.1038/nprot.2013.084 – volume: 6 start-page: 3314 year: 2014 end-page: 3325 ident: CR19 article-title: Nemertean toxin genes revealed through transcriptome sequencing publication-title: Genome Biol. Evol. doi: 10.1093/gbe/evu258 – volume: 3 year: 2008 ident: CR41 article-title: Genomic organization and expression demonstrate spatial and temporal Hox gene colinearity in the lophotrochozoan sp. I publication-title: PLoS ONE doi: 10.1371/journal.pone.0004004 – volume: 129 start-page: 1225 year: 2002 end-page: 1238 ident: CR39 article-title: Exploring the myriapod body plan: expression patterns of the ten Hox genes in a centipede publication-title: Development doi: 10.1242/dev.129.5.1225 – volume: 40 start-page: 243 year: 2008 end-page: 248 ident: CR30 article-title: Role of retrotransposon-derived imprinted gene, , in the feto-maternal interface of mouse placenta publication-title: Nat. Genet. doi: 10.1038/ng.2007.51 – volume: 7 start-page: 1349 year: 2015 end-page: 1362 ident: CR54 article-title: The biomineralizing proteome: a window into brachiopod shell evolution publication-title: Genome Biol. Evol. doi: 10.1093/gbe/evv074 – volume: 25 start-page: 2286 year: 2009 end-page: 2288 ident: CR75 article-title: PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating publication-title: Bioinformatics doi: 10.1093/bioinformatics/btp368 – volume: 541 start-page: 394 year: 2017 end-page: 397 ident: CR33 article-title: Hyoliths are Palaeozoic lophophorates publication-title: Nature doi: 10.1038/nature20804 – volume: 6 year: 2015 ident: CR11 article-title: The genome provides insights into brachiopod evolution and the origin of phosphate biomineralization publication-title: Nat. Commun. doi: 10.1038/ncomms9301 – volume: 5 year: 2016 ident: CR29 article-title: The genome of the crustacean , a model for animal development, regeneration, immunity and lignocellulose digestion. publication-title: eLife doi: 10.7554/eLife.20062 – volume: 24 start-page: 637 year: 2008 end-page: 644 ident: CR67 article-title: Using native and syntenically mapped cDNA alignments to improve de novo gene finding publication-title: Bioinformatics doi: 10.1093/bioinformatics/btn013 – volume: 317 start-page: 86 year: 2007 end-page: 94 ident: CR23 article-title: Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization publication-title: Science doi: 10.1126/science.1139158 – volume: 12 start-page: 11 year: 2011 end-page: 19 ident: CR68 article-title: Using OrthoMCL to assign proteins to OrthoMCL-DB groups or to cluster proteomes into new ortholog groups publication-title: Curr. Protoc. Bioinformatics – volume: 490 start-page: 49 year: 2012 end-page: 54 ident: CR10 article-title: The oyster genome reveals stress adaptation and complexity of shell formation publication-title: Nature doi: 10.1038/nature11413 – volume: 2 year: 2016 ident: CR18 article-title: Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle publication-title: Zool. Lett. doi: 10.1186/s40851-016-0039-2 – volume: 10 start-page: 51 year: 2014 end-page: 67 ident: CR71 article-title: TreSpEx-detection of misleading signal in phylogenetic reconstructions based on tree information publication-title: Evol. Bioinform. Online doi: 10.4137/EBO.S14239 – volume: 25 start-page: 1347 year: 2015 end-page: 1353 ident: CR20 article-title: A transcriptomic–phylogenomic analysis of the evolutionary relationships of flatworms publication-title: Curr. Biol. doi: 10.1016/j.cub.2015.03.034 – volume: 12 year: 2011 ident: CR65 article-title: RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome publication-title: BMC Bioinformatics doi: 10.1186/1471-2105-12-323 – volume: 30 start-page: 1312 year: 2014 end-page: 1313 ident: CR74 article-title: RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies publication-title: Bioinformatics doi: 10.1093/bioinformatics/btu033 – volume: 13 year: 2013 ident: CR4 article-title: New phylogenomic data support the monophyly of Lophophorata and an ectoproct–phoronid clade and indicate that Polyzoa and Kryptrochozoa are caused by systematic bias publication-title: BMC Evol. Biol. doi: 10.1186/1471-2148-13-253 – volume: 30 start-page: 3059 year: 2002 end-page: 3066 ident: CR72 article-title: MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkf436 – volume: 31 start-page: 1391 year: 2014 end-page: 1401 ident: CR15 article-title: Illuminating the base of the annelid tree using transcriptomics publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msu080 – volume: 457 start-page: 1007 year: 2009 end-page: 1011 ident: CR6 article-title: Nodal signalling is involved in left–right asymmetry in snails publication-title: Nature doi: 10.1038/nature07603 – volume: 399 start-page: 772 year: 1999 end-page: 776 ident: CR35 article-title: Hox genes in brachiopods and priapulids and protostome evolution publication-title: Nature doi: 10.1038/21631 – volume: 5 year: 2015 ident: CR8 article-title: Massive expansion and functional divergence of innate immune genes in a protostome publication-title: Sci. Rep. doi: 10.1038/srep08693 – volume: 13 start-page: 767 year: 2012 end-page: 779 ident: CR26 article-title: The complex world of WNT receptor signalling publication-title: Nat. Rev. Mol. Cell Biol. doi: 10.1038/nrm3470 – volume: 66 start-page: 256 year: 2017 end-page: 282 ident: CR16 article-title: Phylogenomics of Lophotrochozoa with consideration of systematic error publication-title: Syst. Biol. – volume: 9 year: 2009 ident: CR70 article-title: HaMStR: profile hidden markov model based search for orthologs in ESTs publication-title: BMC Evol. Biol. doi: 10.1186/1471-2148-9-157 – volume: 483 start-page: 289 year: 2012 end-page: 294 ident: CR49 article-title: Ancient deuterostome origins of vertebrate brain signalling centres publication-title: Nature doi: 10.1038/nature10838 – volume: 21 start-page: i351 year: 2005 end-page: i358 ident: CR66 article-title: De novo identification of repeat families in large genomes publication-title: Bioinformatics doi: 10.1093/bioinformatics/bti1018 – volume: 9 start-page: 357 year: 2012 end-page: 359 ident: CR64 article-title: Fast gapped-read alignment with Bowtie 2 publication-title: Nat. Methods doi: 10.1038/nmeth.1923 – volume: 27 start-page: 87 year: 2016 end-page: 95 ident: CR38 article-title: The adult body plan of indirect developing hemichordates develops by adding a Hox-patterned trunk to an anterior larval territory publication-title: Curr. Biol. doi: 10.1016/j.cub.2016.10.047 – volume: 8 year: 2017 ident: CR36 article-title: Rotiferan Hox genes give new insights into the evolution of metazoan bodyplans publication-title: Nat. Commun. doi: 10.1038/s41467-017-00020-w – volume: 527 start-page: 459 year: 2015 end-page: 465 ident: CR27 article-title: Hemichordate genomes and deuterostome origins publication-title: Nature doi: 10.1038/nature16150 – volume: 13 start-page: 616 year: 2012 end-page: 630 ident: CR25 article-title: TGFβ signalling in context publication-title: Nat. Rev. Mol. Cell Biol. doi: 10.1038/nrm3434 – volume: 10 year: 2015 ident: CR43 article-title: Modern data on the innervation of the lophophore in (Brachiopoda) support the monophyly of the lophophorates publication-title: PLoS ONE doi: 10.1371/journal.pone.0123040 – volume: 139 start-page: 1056 year: 2009 end-page: 1068 ident: CR45 article-title: Wnt signaling and the polarity of the primary body axis publication-title: Cell doi: 10.1016/j.cell.2009.11.035 – volume: 112 start-page: 15360 year: 2015 end-page: 15365 ident: CR52 article-title: Stonefish toxin defines an ancient branch of the perforin-like superfamily publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1507622112 – volume: 55 start-page: 1121 year: 2010 end-page: 1127 ident: CR14 article-title: Phylogenetic relationships within the lophophorate lineages (Ectoprocta, Brachiopoda and Phoronida) publication-title: Mol. Phylogenet. Evol. doi: 10.1016/j.ympev.2009.12.022 – volume: 497 start-page: 327 year: 2013 end-page: 331 ident: CR22 article-title: Inferring ancient divergences requires genes with strong phylogenetic signals publication-title: Nature doi: 10.1038/nature12130 – volume: 253 start-page: 5752 year: 1978 end-page: 5757 ident: CR53 article-title: Purification and characterization of the cytotoxic A toxins publication-title: J. Biol. Chem. doi: 10.1016/S0021-9258(17)30331-9 – volume: 25 start-page: 2000 year: 2015 end-page: 2006 ident: CR5 article-title: Spiralian phylogeny informs the evolution of microscopic lineages publication-title: Curr. Biol. doi: 10.1016/j.cub.2015.06.068 – volume: 518 start-page: 534 year: 2015 end-page: 537 ident: CR56 article-title: Evolution of the new vertebrate head by co-option of an ancient chordate skeletal tissue publication-title: Nature doi: 10.1038/nature14000 – volume: 524 start-page: 220 year: 2015 end-page: 224 ident: CR17 article-title: The octopus genome and the evolution of cephalopod neural and morphological novelties publication-title: Nature doi: 10.1038/nature14668 – volume: 25 start-page: 1347 year: 2015 ident: 389_CR20 publication-title: Curr. Biol. doi: 10.1016/j.cub.2015.03.034 – volume: 399 start-page: 772 year: 1999 ident: 389_CR35 publication-title: Nature doi: 10.1038/21631 – volume: 25 start-page: 2286 year: 2009 ident: 389_CR75 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btp368 – volume: 4 year: 2014 ident: 389_CR21 publication-title: Sci. Rep. doi: 10.1038/srep06534 – volume: 139 start-page: 1056 year: 2009 ident: 389_CR45 publication-title: Cell doi: 10.1016/j.cell.2009.11.035 – volume: 527 start-page: 459 year: 2015 ident: 389_CR27 publication-title: Nature doi: 10.1038/nature16150 – volume: 520 start-page: 456 year: 2015 ident: 389_CR48 publication-title: Nature doi: 10.1038/nature14434 – volume: 9 year: 2009 ident: 389_CR70 publication-title: BMC Evol. Biol. doi: 10.1186/1471-2148-9-157 – volume: 2 year: 2016 ident: 389_CR18 publication-title: Zool. Lett. doi: 10.1186/s40851-016-0039-2 – volume: 22 start-page: 2189 year: 2012 ident: 389_CR1 publication-title: Curr. Biol. doi: 10.1016/j.cub.2012.09.036 – volume: 13 year: 2013 ident: 389_CR4 publication-title: BMC Evol. Biol. doi: 10.1186/1471-2148-13-253 – volume: 5 year: 2015 ident: 389_CR8 publication-title: Sci. Rep. doi: 10.1038/srep08693 – volume: 10 start-page: 51 year: 2014 ident: 389_CR71 publication-title: Evol. Bioinform. Online doi: 10.4137/EBO.S14239 – volume: 7 start-page: 1349 year: 2015 ident: 389_CR54 publication-title: Genome Biol. Evol. doi: 10.1093/gbe/evv074 – volume: 13 start-page: 616 year: 2012 ident: 389_CR25 publication-title: Nat. Rev. Mol. Cell Biol. doi: 10.1038/nrm3434 – volume: 21 start-page: i351 year: 2005 ident: 389_CR66 publication-title: Bioinformatics doi: 10.1093/bioinformatics/bti1018 – volume: 6 start-page: 3314 year: 2014 ident: 389_CR19 publication-title: Genome Biol. Evol. doi: 10.1093/gbe/evu258 – volume: 66 start-page: 256 year: 2017 ident: 389_CR16 publication-title: Syst. Biol. – volume: 296 start-page: 190 year: 2006 ident: 389_CR37 publication-title: Dev. Biol. doi: 10.1016/j.ydbio.2006.04.457 – volume: 6 start-page: 893 year: 2005 ident: 389_CR31 publication-title: Nat. Rev. Genet. doi: 10.1038/nrg1726 – volume: 55 start-page: 1121 year: 2010 ident: 389_CR14 publication-title: Mol. Phylogenet. Evol. doi: 10.1016/j.ympev.2009.12.022 – volume: 40 start-page: 243 year: 2008 ident: 389_CR30 publication-title: Nat. Genet. doi: 10.1038/ng.2007.51 – volume: 26 start-page: 2397 year: 2009 ident: 389_CR13 publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msp150 – volume: 31 start-page: 1391 year: 2014 ident: 389_CR15 publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msu080 – volume: 13 year: 2015 ident: 389_CR40 publication-title: BMC Biol. doi: 10.1186/s12915-015-0133-5 – volume: 70 start-page: 94 year: 2014 ident: 389_CR76 publication-title: Mol. Phylogenet. Evol. doi: 10.1016/j.ympev.2013.09.011 – volume: 112 start-page: 15360 year: 2015 ident: 389_CR52 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1507622112 – volume: 8 year: 2017 ident: 389_CR36 publication-title: Nat. Commun. doi: 10.1038/s41467-017-00020-w – volume: 490 start-page: 49 year: 2012 ident: 389_CR10 publication-title: Nature doi: 10.1038/nature11413 – volume: 457 start-page: 1007 year: 2009 ident: 389_CR6 publication-title: Nature doi: 10.1038/nature07603 – volume: 6 year: 2015 ident: 389_CR11 publication-title: Nat. Commun. doi: 10.1038/ncomms9301 – volume: 2 year: 2011 ident: 389_CR44 publication-title: Nat. Commun. doi: 10.1038/ncomms1248 – volume: 23 start-page: 1061 year: 2007 ident: 389_CR62 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btm071 – volume: 30 start-page: 1312 year: 2014 ident: 389_CR74 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btu033 – volume: 389 start-page: 517 year: 1997 ident: 389_CR46 publication-title: Nature doi: 10.1038/39092 – volume: 16 year: 2016 ident: 389_CR42 publication-title: BMC Evol. Biol. doi: 10.1186/s12862-016-0744-7 – volume: 253 start-page: 5752 year: 1978 ident: 389_CR53 publication-title: J. Biol. Chem. doi: 10.1016/S0021-9258(17)30331-9 – volume: 524 start-page: 220 year: 2015 ident: 389_CR17 publication-title: Nature doi: 10.1038/nature14668 – volume: 452 start-page: 745 year: 2008 ident: 389_CR3 publication-title: Nature doi: 10.1038/nature06614 – volume: 518 start-page: 534 year: 2015 ident: 389_CR56 publication-title: Nature doi: 10.1038/nature14000 – volume: 466 start-page: 720 year: 2010 ident: 389_CR24 publication-title: Nature doi: 10.1038/nature09201 – volume: 25 start-page: 2000 year: 2015 ident: 389_CR5 publication-title: Curr. Biol. doi: 10.1016/j.cub.2015.06.068 – volume: 4 year: 2014 ident: 389_CR34 publication-title: Sci. Rep. doi: 10.1038/srep04682 – volume: 317 start-page: 86 year: 2007 ident: 389_CR23 publication-title: Science doi: 10.1126/science.1139158 – volume: 334 start-page: 1091 year: 2011 ident: 389_CR55 publication-title: Science doi: 10.1126/science.1206375 – volume: 1 start-page: 135 year: 2001 ident: 389_CR51 publication-title: Nat. Rev. Immunol. doi: 10.1038/35100529 – volume: 275 start-page: 1927 year: 2008 ident: 389_CR12 publication-title: Proc. Biol. Sci. – volume: 24 start-page: 1384 year: 2014 ident: 389_CR57 publication-title: Genome Res. doi: 10.1101/gr.170720.113 – volume: 30 start-page: 3059 year: 2002 ident: 389_CR72 publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkf436 – volume: 8 start-page: 1494 year: 2013 ident: 389_CR63 publication-title: Nat. Protoc. doi: 10.1038/nprot.2013.084 – volume: 25 start-page: 1972 year: 2009 ident: 389_CR73 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btp348 – volume: 13 start-page: 767 year: 2012 ident: 389_CR26 publication-title: Nat. Rev. Mol. Cell Biol. doi: 10.1038/nrm3470 – volume: 221 start-page: 187 year: 2011 ident: 389_CR28 publication-title: Dev. Genes Evol. doi: 10.1007/s00427-011-0370-8 – volume: 12 start-page: 11 year: 2011 ident: 389_CR68 publication-title: Curr. Protoc. Bioinformatics – volume: 227 start-page: 201 year: 2014 ident: 389_CR7 publication-title: Biol. Bull. doi: 10.1086/BBLv227n2p201 – volume: 5 year: 2016 ident: 389_CR29 publication-title: eLife doi: 10.7554/eLife.20062 – volume: 1 year: 2010 ident: 389_CR47 publication-title: EvoDevo doi: 10.1186/2041-9139-1-14 – volume: 3 year: 2008 ident: 389_CR41 publication-title: PLoS ONE doi: 10.1371/journal.pone.0004004 – volume: 27 start-page: 764 year: 2011 ident: 389_CR61 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btr011 – volume: 483 start-page: 289 year: 2012 ident: 389_CR49 publication-title: Nature doi: 10.1038/nature10838 – volume: 3 year: 2012 ident: 389_CR50 publication-title: EvoDevo doi: 10.1186/2041-9139-3-3 – volume: 22 start-page: 1581 year: 2012 ident: 389_CR60 publication-title: Genome Res. doi: 10.1101/gr.133652.111 – volume: 10 year: 2015 ident: 389_CR43 publication-title: PLoS ONE doi: 10.1371/journal.pone.0123040 – volume: 27 start-page: 578 year: 2011 ident: 389_CR58 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btq683 – volume: 12 year: 2011 ident: 389_CR65 publication-title: BMC Bioinformatics doi: 10.1186/1471-2105-12-323 – volume: 24 start-page: 637 year: 2008 ident: 389_CR67 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btn013 – volume: 15 year: 2014 ident: 389_CR59 publication-title: BMC Bioinformatics doi: 10.1186/1471-2105-15-211 – volume: 541 start-page: 394 year: 2017 ident: 389_CR33 publication-title: Nature doi: 10.1038/nature20804 – volume: 493 start-page: 526 year: 2013 ident: 389_CR9 publication-title: Nature doi: 10.1038/nature11696 – volume: 497 start-page: 327 year: 2013 ident: 389_CR22 publication-title: Nature doi: 10.1038/nature12130 – volume: 9 start-page: 357 year: 2012 ident: 389_CR64 publication-title: Nat. Methods doi: 10.1038/nmeth.1923 – volume: 114 start-page: E1913 year: 2017 ident: 389_CR32 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1614501114 – volume: 129 start-page: 1225 year: 2002 ident: 389_CR39 publication-title: Development doi: 10.1242/dev.129.5.1225 – volume: 530 start-page: 89 year: 2016 ident: 389_CR2 publication-title: Nature doi: 10.1038/nature16520 – volume: 22 start-page: 1269 year: 2006 ident: 389_CR69 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btl097 – volume: 27 start-page: 87 year: 2016 ident: 389_CR38 publication-title: Curr. Biol. doi: 10.1016/j.cub.2016.10.047 |
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Title | Nemertean and phoronid genomes reveal lophotrochozoan evolution and the origin of bilaterian heads |
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