Lost in diversity the interactions between soil-borne fungi, biodiversity and plant productivity

There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently, differential accumulation of soil-borne fungal pathogens across the plant diversity gradient has been proposed as a cause of this pattern. Howeve...

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Published inThe New phytologist Vol. 218; no. 2; pp. 542 - 553
Main Authors Mommer, Liesje, Cotton, T. E. Anne, Raaijmakers, Jos M., Termorshuizen, Aad J., Ruijven, Jasper, Hendriks, Marloes, Rijssel, Sophia Q., Mortel, Judith E., Paauw, Jan Willem, Schijlen, Elio G. W. M., Smit‐Tiekstra, Annemiek E., Berendse, Frank, Kroon, Hans, Dumbrell, Alex J.
Format Journal Article
LanguageEnglish
Published England New Phytologist Trust 01.04.2018
John Wiley and Sons Inc
Subjects
Biodiversity
Biomass
BIOS Applied Bioinformatics
community structure
density dependence
fungal communities
fungal community composition
Fungi - pathogenicity
Fungi - physiology
grasslands
high-throughput nucleotide sequencing
host specificity
Host-Pathogen Interactions
Models, Biological
Nature Conservation and Plant Ecology
Natuurbeheer en Plantenecologie
neighbour identity
pathogenicity
pathogens
PE&RC
Plant Development
Plant Ecology and Nature Conservation
plant growth
Plant Roots - genetics
Plant Roots - microbiology
Plantenecologie en Natuurbeheer
Plants - microbiology
PRI BIOS Applied Bioinformatics
root distribution
root‐associated fungi
soil fungi
Soil Microbiology
species diversity
Species Specificity
WIMEK
root-associated fungi
neighbour identity
fungal community composition
host specificity
root distribution
density dependence
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Abstract There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently, differential accumulation of soil-borne fungal pathogens across the plant diversity gradient has been proposed as a cause of this pattern. However, the below-ground environment has generally been treated as a ‘black box’ in biodiversity experiments, leaving these fungi unidentified. Using next generation sequencing and pathogenicity assays, we analysed the community composition of root-associated fungi from a biodiversity experiment to examine if evidence exists for host specificity and negative density dependence in the interplay between soil-borne fungi, plant diversity and productivity. Plant species were colonised by distinct (pathogenic) fungal communities and isolated fungal species showed negative, species-specific effects on plant growth. Moreover, 57% of the pathogenic fungal operational taxonomic units (OTUs) recorded in plant monocultures were not detected in eight plant species plots, suggesting a loss of pathogenic OTUs with plant diversity. Our work provides strong evidence for host specificity and negative density-dependent effects of root-associated fungi on plant species in grasslands. Our work substantiates the hypothesis that fungal root pathogens are an important driver of biodiversity-ecosystem functioning relationships.
AbstractList There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently, differential accumulation of soil‐borne fungal pathogens across the plant diversity gradient has been proposed as a cause of this pattern. However, the below‐ground environment has generally been treated as a ‘black box’ in biodiversity experiments, leaving these fungi unidentified. Using next generation sequencing and pathogenicity assays, we analysed the community composition of root‐associated fungi from a biodiversity experiment to examine if evidence exists for host specificity and negative density dependence in the interplay between soil‐borne fungi, plant diversity and productivity. Plant species were colonised by distinct (pathogenic) fungal communities and isolated fungal species showed negative, species‐specific effects on plant growth. Moreover, 57% of the pathogenic fungal operational taxonomic units (OTUs) recorded in plant monocultures were not detected in eight plant species plots, suggesting a loss of pathogenic OTUs with plant diversity. Our work provides strong evidence for host specificity and negative density‐dependent effects of root‐associated fungi on plant species in grasslands. Our work substantiates the hypothesis that fungal root pathogens are an important driver of biodiversity‐ecosystem functioning relationships.
Summary There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently, differential accumulation of soil‐borne fungal pathogens across the plant diversity gradient has been proposed as a cause of this pattern. However, the below‐ground environment has generally been treated as a ‘black box’ in biodiversity experiments, leaving these fungi unidentified. Using next generation sequencing and pathogenicity assays, we analysed the community composition of root‐associated fungi from a biodiversity experiment to examine if evidence exists for host specificity and negative density dependence in the interplay between soil‐borne fungi, plant diversity and productivity. Plant species were colonised by distinct (pathogenic) fungal communities and isolated fungal species showed negative, species‐specific effects on plant growth. Moreover, 57% of the pathogenic fungal operational taxonomic units (OTUs) recorded in plant monocultures were not detected in eight plant species plots, suggesting a loss of pathogenic OTUs with plant diversity. Our work provides strong evidence for host specificity and negative density‐dependent effects of root‐associated fungi on plant species in grasslands. Our work substantiates the hypothesis that fungal root pathogens are an important driver of biodiversity‐ecosystem functioning relationships.
There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently, differential accumulation of soil-borne fungal pathogens across the plant diversity gradient has been proposed as a cause of this pattern. However, the below-ground environment has generally been treated as a 'black box' in biodiversity experiments, leaving these fungi unidentified. Using next generation sequencing and pathogenicity assays, we analysed the community composition of root-associated fungi from a biodiversity experiment to examine if evidence exists for host specificity and negative density dependence in the interplay between soil-borne fungi, plant diversity and productivity. Plant species were colonised by distinct (pathogenic) fungal communities and isolated fungal species showed negative, species-specific effects on plant growth. Moreover, 57% of the pathogenic fungal operational taxonomic units (OTUs) recorded in plant monocultures were not detected in eight plant species plots, suggesting a loss of pathogenic OTUs with plant diversity. Our work provides strong evidence for host specificity and negative density-dependent effects of root-associated fungi on plant species in grasslands. Our work substantiates the hypothesis that fungal root pathogens are an important driver of biodiversity-ecosystem functioning relationships.There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently, differential accumulation of soil-borne fungal pathogens across the plant diversity gradient has been proposed as a cause of this pattern. However, the below-ground environment has generally been treated as a 'black box' in biodiversity experiments, leaving these fungi unidentified. Using next generation sequencing and pathogenicity assays, we analysed the community composition of root-associated fungi from a biodiversity experiment to examine if evidence exists for host specificity and negative density dependence in the interplay between soil-borne fungi, plant diversity and productivity. Plant species were colonised by distinct (pathogenic) fungal communities and isolated fungal species showed negative, species-specific effects on plant growth. Moreover, 57% of the pathogenic fungal operational taxonomic units (OTUs) recorded in plant monocultures were not detected in eight plant species plots, suggesting a loss of pathogenic OTUs with plant diversity. Our work provides strong evidence for host specificity and negative density-dependent effects of root-associated fungi on plant species in grasslands. Our work substantiates the hypothesis that fungal root pathogens are an important driver of biodiversity-ecosystem functioning relationships.
There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently, differential accumulation of soil‐borne fungal pathogens across the plant diversity gradient has been proposed as a cause of this pattern. However, the below‐ground environment has generally been treated as a ‘black box’ in biodiversity experiments, leaving these fungi unidentified. Using next generation sequencing and pathogenicity assays, we analysed the community composition of root‐associated fungi from a biodiversity experiment to examine if evidence exists for host specificity and negative density dependence in the interplay between soil‐borne fungi, plant diversity and productivity. Plant species were colonised by distinct (pathogenic) fungal communities and isolated fungal species showed negative, species‐specific effects on plant growth. Moreover, 57% of the pathogenic fungal operational taxonomic units (OTUs) recorded in plant monocultures were not detected in eight plant species plots, suggesting a loss of pathogenic OTUs with plant diversity. Our work provides strong evidence for host specificity and negative density‐dependent effects of root‐associated fungi on plant species in grasslands. Our work substantiates the hypothesis that fungal root pathogens are an important driver of biodiversity‐ecosystem functioning relationships.
Author T. E. Anne Cotton
Jan Willem van der Paauw
Liesje Mommer
Judith E. van de Mortel
Alex J. Dumbrell
Frank Berendse
Jos M. Raaijmakers
Elio G. W. M. Schijlen
Sophia Q. van Rijssel
Annemiek E. Smit-Tiekstra
Aad J. Termorshuizen
Marloes Hendriks
Jasper van Ruijven
Hans de Kroon
AuthorAffiliation 5 Soil Cares Research Nieuwe Kanaal 7C Wageningen 6709 PA the Netherlands
4 Department of Microbial Ecology Netherlands Institute for Ecology (NIOO‐KNAW) PO Box 50 Wageningen 6700 AB the Netherlands
1 Plant Ecology and Nature Conservation Group Wageningen University PO Box 47 Wageningen 6700 AA the Netherlands
8 Wageningen University and Research BU Bioscience PO Box 16 Wageningen 6700 AA the Netherlands
2 School of Biological Sciences University of Essex Wivenhoe Park Colchester CO4 3SQ UK
6 Institute for Water and Wetland Research Experimental Plant Ecology Radboud University Nijmegen PO Box 9010 Nijmegen 6500 GL the Netherlands
3 Department of Animal and Plant Sciences University of Sheffield South Yorkshire S10 2TN UK
7 HAS University of Applied Sciences Department of Applied Biology University of Applied Sciences Spoorstraat 62 Venlo 5911 KJ the Netherlands
AuthorAffiliation_xml – name: 3 Department of Animal and Plant Sciences University of Sheffield South Yorkshire S10 2TN UK
– name: 8 Wageningen University and Research BU Bioscience PO Box 16 Wageningen 6700 AA the Netherlands
– name: 6 Institute for Water and Wetland Research Experimental Plant Ecology Radboud University Nijmegen PO Box 9010 Nijmegen 6500 GL the Netherlands
– name: 5 Soil Cares Research Nieuwe Kanaal 7C Wageningen 6709 PA the Netherlands
– name: 2 School of Biological Sciences University of Essex Wivenhoe Park Colchester CO4 3SQ UK
– name: 4 Department of Microbial Ecology Netherlands Institute for Ecology (NIOO‐KNAW) PO Box 50 Wageningen 6700 AB the Netherlands
– name: 1 Plant Ecology and Nature Conservation Group Wageningen University PO Box 47 Wageningen 6700 AA the Netherlands
– name: 7 HAS University of Applied Sciences Department of Applied Biology University of Applied Sciences Spoorstraat 62 Venlo 5911 KJ the Netherlands
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  surname: Mommer
  fullname: Mommer, Liesje
  email: Liesje.Mommer@wur.nl
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  organization: Wageningen University
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  fullname: Hendriks, Marloes
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  fullname: Rijssel, Sophia Q.
  organization: Wageningen University
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  organization: University of Applied Sciences
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  fullname: Paauw, Jan Willem
  organization: Wageningen University
– sequence: 10
  givenname: Elio G. W. M.
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  fullname: Schijlen, Elio G. W. M.
  organization: Wageningen University and Research BU Bioscience
– sequence: 11
  givenname: Annemiek E.
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– sequence: 12
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/29468690$$D View this record in MEDLINE/PubMed
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Cites_doi 10.1073/pnas.0607968104
10.1080/07352689209382349
10.1007/BF00377135
10.1371/journal.pone.0164533
10.1111/mec.13232
10.1038/nmeth.f.303
10.1111/nph.13394
10.1111/1365-2745.12650
10.1146/annurev.phyto.40.021202.110417
10.1111/j.1365-294X.2010.04948.x
10.1007/978-1-4419-7976-6
10.1111/nph.13132
10.3852/09-316
10.3852/12-359
10.1038/ncomms7707
10.1890/11-0598.1
10.1111/1365-2745.12877
10.1038/nmeth0910-668b
10.1038/ismej.2013.66
10.1111/j.1600-0706.2008.17119.x
10.1111/j.1365-2745.2010.01702.x
10.1038/nature09273
10.1073/pnas.0709069104
10.1007/978-0-387-98141-3
10.1111/nph.13677
10.1111/oik.01502
10.1007/BF01974782
10.1093/bioinformatics/btq461
10.1093/bioinformatics/btr381
10.1016/j.soilbio.2015.06.012
10.18637/jss.v021.i12
10.1890/04-1122
10.1111/j.1755-0998.2008.02130.x
10.1080/07060660709507437
10.1073/pnas.1706324114
10.1111/nph.12778
10.1094/PHYTO-08-12-0192-LE
10.1146/annurev-ecolsys-112414-054306
10.1098/rspb.2012.0285
10.1890/12-1399.1
10.1111/j.1365-294X.1993.tb00005.x
10.1890/07-2056.1
10.1890/13-2317.1
10.1038/ncomms10017
10.1111/j.1461-0248.2004.00607.x
10.1038/ismej.2017.90
10.1890/10-0773.1
10.1016/S0022-2836(05)80360-2
10.1094/PDIS-94-5-0492
10.1111/j.1365-294X.2010.04989.x
10.1111/1365-2745.12032
10.1111/1365-2745.12280
10.1111/j.1365-2745.2005.01000.x
10.1038/ismej.2009.122
10.1126/science.1171661
10.1016/j.funeco.2015.06.006
10.1126/science.1220269
10.1038/nature04742
10.1038/nature14372
10.18637/jss.v067.i01
10.1111/j.1365-2745.2011.01906.x
10.1016/B978-0-12-372180-8.50042-1
10.2307/1935052
10.1126/science.1256688
10.1111/j.1461-0248.2006.00905.x
10.1038/nature10947
10.1186/s40168-017-0237-y
10.1111/j.1461-0248.2010.01547.x
10.1073/pnas.0407524102
10.1111/mec.14175
ContentType Journal Article
Copyright Copyright © 2018 New Phytologist Trust
2018 The Authors. New Phytologist © 2018 New Phytologist Trust
2018 The Authors. New Phytologist © 2018 New Phytologist Trust.
Wageningen University & Research
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Issue 2
Keywords root-associated fungi
neighbour identity
fungal community composition
host specificity
root distribution
density dependence
Language English
License Attribution-NonCommercial-NoDerivs
http://creativecommons.org/licenses/by-nc-nd/4.0
2018 The Authors. New Phytologist © 2018 New Phytologist Trust.
This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
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content type line 23
These authors contributed equally to this work.
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References 2017; 5
2007; 104
2010; 98
2012; 484
2010; 466
1982; 53
2004; 7
2010; 102
2008; 8
2011; 14
2013; 7
2009; 118
1992; 11
1993; 2
2017; 114
2015; 46
2007; 29
1990; 215
2010; 26
1990
2002; 40
2005; 102
2013; 94
2015; 88
2011; 20
2011; 27
2014; 95
2007; 21
2012; 336
2010; 4
2010; 7
2009; 324
1981; 31
2014; 203
2006; 441
2014; 123
2015; 6
2012; 100
2017; 26
2016; 209
2018; 106
2011
2015; 520
2013; 105
2006; 9
2013; 101
2009
2008
2007
2013; 103
2005; 86
2015; 207
2015; 206
2002; 417
1994; 84
2016; 11
2015; 24
2015; 67
2012; 93
1976; 57
2017; 11
1993; 99
2011; 92
2016; 20
2008; 89
2017
2016
2014
2013
2012; 279
2017; 105
2014; 346
2010; 94
2014; 102
e_1_2_7_5_1
e_1_2_7_3_1
e_1_2_7_9_1
e_1_2_7_7_1
e_1_2_7_19_1
e_1_2_7_60_1
e_1_2_7_17_1
e_1_2_7_62_1
e_1_2_7_81_1
e_1_2_7_15_1
e_1_2_7_41_1
e_1_2_7_64_1
e_1_2_7_13_1
e_1_2_7_43_1
e_1_2_7_66_1
e_1_2_7_11_1
e_1_2_7_45_1
e_1_2_7_68_1
e_1_2_7_47_1
e_1_2_7_26_1
e_1_2_7_49_1
e_1_2_7_28_1
Gilbert GS (e_1_2_7_32_1) 1994; 84
Smith SE (e_1_2_7_74_1) 2008
e_1_2_7_73_1
e_1_2_7_50_1
e_1_2_7_71_1
e_1_2_7_25_1
e_1_2_7_31_1
e_1_2_7_52_1
e_1_2_7_77_1
e_1_2_7_23_1
e_1_2_7_33_1
e_1_2_7_54_1
e_1_2_7_75_1
e_1_2_7_35_1
e_1_2_7_56_1
e_1_2_7_37_1
e_1_2_7_58_1
e_1_2_7_79_1
e_1_2_7_39_1
Garibaldi A (e_1_2_7_30_1) 1981; 31
e_1_2_7_6_1
e_1_2_7_4_1
e_1_2_7_80_1
e_1_2_7_8_1
e_1_2_7_18_1
e_1_2_7_16_1
e_1_2_7_40_1
e_1_2_7_61_1
e_1_2_7_82_1
e_1_2_7_2_1
e_1_2_7_14_1
e_1_2_7_42_1
e_1_2_7_63_1
e_1_2_7_12_1
e_1_2_7_44_1
e_1_2_7_65_1
e_1_2_7_10_1
e_1_2_7_46_1
e_1_2_7_67_1
e_1_2_7_48_1
e_1_2_7_69_1
e_1_2_7_27_1
e_1_2_7_29_1
Domsch KH (e_1_2_7_21_1) 2007
e_1_2_7_72_1
e_1_2_7_51_1
e_1_2_7_70_1
e_1_2_7_53_1
e_1_2_7_76_1
e_1_2_7_24_1
e_1_2_7_55_1
Dumbrell AJ (e_1_2_7_22_1) 2017
e_1_2_7_34_1
e_1_2_7_57_1
e_1_2_7_20_1
e_1_2_7_36_1
e_1_2_7_59_1
e_1_2_7_78_1
e_1_2_7_38_1
References_xml – year: 2011
– volume: 86
  start-page: 1948
  year: 2005
  end-page: 1957
  article-title: Damping‐off epidemics, contact structure, and disease transmission in mixed‐species populations
  publication-title: Ecology
– year: 2009
– volume: 94
  start-page: 787
  year: 2013
  end-page: 793
  article-title: Root depth distribution and the diversity‐productivity relationship in a long‐term grassland experiment
  publication-title: Ecology
– volume: 26
  start-page: 2460
  year: 2010
  end-page: 2461
  article-title: Search and clustering orders of magnitude faster than BLAST
  publication-title: Bioinformatics
– volume: 118
  start-page: 101
  year: 2009
  end-page: 106
  article-title: Long‐term persistence of a positive plant diversity–productivity relationship in the absence of legumes
  publication-title: Oikos
– volume: 94
  start-page: 492
  year: 2010
  end-page: 503
  article-title: Disease in natural plant populations, communities, and ecosystems: insights into ecological and evolutionary processes
  publication-title: Plant Disease
– volume: 7
  start-page: 668
  year: 2010
  end-page: 669
  article-title: Rapidly denoising pyrosequencing amplicon reads by exploiting rank‐abundance distributions
  publication-title: Nature Methods
– volume: 14
  start-page: 36
  year: 2011
  end-page: 41
  article-title: Soil fungal pathogens and the relationship between plant diversity and productivity
  publication-title: Ecology Letters
– volume: 67
  start-page: 1
  year: 2015
  end-page: 48
  article-title: Fitting linear mixed‐effects models using lme4
  publication-title: Journal of Statistical Software
– volume: 27
  start-page: 2194
  year: 2011
  end-page: 2200
  article-title: UCHIME improves sensitivity and speed of chimera detection
  publication-title: Bioinformatics
– volume: 441
  start-page: 629
  year: 2006
  end-page: 632
  article-title: Biodiversity and ecosystem stability in a decade‐long grassland experiment
  publication-title: Nature
– year: 1990
– year: 2014
– volume: 20
  start-page: 1289
  year: 2011
  end-page: 1302
  article-title: Spatial patterns of plant diversity below‐ground as revealed by DNA barcoding
  publication-title: Molecular Ecology
– volume: 20
  start-page: 275
  year: 2011
  end-page: 285
  article-title: Species abundance distributions and richness estimations in fungal metagenomics – lessons learned from community ecology
  publication-title: Molecular Ecology
– volume: 92
  start-page: 296
  year: 2011
  end-page: 303
  article-title: Soil microbes drive the classic plant diversity‐productivity pattern
  publication-title: Ecology
– volume: 88
  start-page: 403
  year: 2015
  end-page: 413
  article-title: Soil conditions and land use intensification effects on soil microbial communities across a range of European field sites
  publication-title: Soil Biology & Biochemistry
– volume: 6
  start-page: 6707
  year: 2015
  article-title: Plant diversity increases soil microbial activity and soil carbon storage
  publication-title: Nature Communications
– volume: 20
  start-page: 241
  year: 2016
  end-page: 248
  article-title: FUNGuild: an open annotation tool for parsing fungal community datasets by ecological guild
  publication-title: Fungal Ecology
– volume: 520
  start-page: 542
  year: 2015
  end-page: 544
  article-title: Phylogenetic structure and host abundance drive disease pressure in communities
  publication-title: Nature
– year: 2008
– volume: 105
  start-page: 209
  year: 2017
  end-page: 218
  article-title: Plant species richness negatively affects root decomposition in grasslands
  publication-title: Journal of Ecology
– volume: 4
  start-page: 337
  year: 2010
  end-page: 345
  article-title: Relative roles of niche and neutral processes in structuring a soil microbial community
  publication-title: ISME Journal
– volume: 53
  start-page: 50
  year: 1982
  end-page: 55
  article-title: Competition between plant‐populations with different rooting depths. 3. Field experiments
  publication-title: Oecologia
– volume: 207
  start-page: 830
  year: 2015
  end-page: 840
  article-title: Spatial heterogeneity of plant–soil feedback affects root interactions and interspecific competition
  publication-title: New Phytologist
– volume: 105
  start-page: 1019
  year: 2013
  end-page: 1029
  article-title: , a new genus in Magnaporthaceae (Ascomycota)
  publication-title: Mycologia
– volume: 324
  start-page: 746
  year: 2009
  end-page: 748
  article-title: Plant–microbe interactions: chemical diversity in plant defense
  publication-title: Science
– volume: 46
  start-page: 305
  year: 2015
  end-page: 325
  article-title: Maintenance of plant species diversity by pathogens
  publication-title: Annual Review of Ecology, Evolution, and Systematics
– volume: 203
  start-page: 63
  year: 2014
  end-page: 69
  article-title: Plant diversity and overyielding: insights from belowground facilitation of intercropping in agriculture
  publication-title: New Phytologist
– volume: 98
  start-page: 1117
  year: 2010
  end-page: 1127
  article-title: Unveiling below‐ground species abundance in a biodiversity experiment: a test of vertical niche differentiation among grassland species
  publication-title: Journal of Ecology
– volume: 89
  start-page: 2399
  year: 2008
  end-page: 2406
  article-title: Janzen‐Connell effects are widespread and strong enough to maintain diversity in grasslands
  publication-title: Ecology
– volume: 100
  start-page: 6
  year: 2012
  end-page: 15
  article-title: Root responses to nutrients and soil biota: drivers of species coexistence and ecosystem productivity
  publication-title: Journal of Ecology
– volume: 99
  start-page: 23
  year: 1993
  end-page: 33
  article-title: Pathogenic fungi involved in root rot of peas in the Netherlands and their physiological specialization
  publication-title: Netherlands Journal of Plant Pathology
– volume: 101
  start-page: 287
  year: 2013
  end-page: 297
  article-title: Independent variations of plant and soil mixtures reveal soil feedback effects on plant community overyielding
  publication-title: Journal of Ecology
– volume: 102
  start-page: 1027
  year: 2010
  end-page: 1041
  article-title: Vertical distribution of fungal communities in tallgrass prairie soil
  publication-title: Mycologia
– volume: 5
  start-page: 27
  year: 2017
  article-title: Normalization and microbial differential abundance strategies depend upon data characteristics
  publication-title: Microbiome
– start-page: 155
  year: 2017
  end-page: 206
– volume: 6
  start-page: 10017
  year: 2015
  article-title: The effect of soil‐borne pathogens depends on the abundance of host tree species
  publication-title: Nature Communications
– volume: 102
  start-page: 1163
  year: 2014
  end-page: 1170
  article-title: Plant species richness promotes soil carbon and nitrogen stocks in grasslands without legumes
  publication-title: Journal of Ecology
– volume: 104
  start-page: 4979
  year: 2007
  end-page: 4983
  article-title: Phylogenetic signal in plant pathogen–host range
  publication-title: Proceedings of the National Academy of Sciences, USA
– volume: 11
  start-page: 309
  year: 1992
  end-page: 326
  article-title: Crop rotation
  publication-title: Critical Reviews in Plant Sciences
– volume: 11
  start-page: e0164533
  year: 2016
  article-title: Microbiome and exudates of the root and rhizosphere of , a model for wheat
  publication-title: PLoS ONE
– volume: 209
  start-page: 1174
  year: 2016
  end-page: 1183
  article-title: Competitive avoidance not edaphic specialization drives vertical niche partitioning among sister species of ectomycorrhizal fungi
  publication-title: New Phytologist
– volume: 21
  start-page: 1
  year: 2007
  end-page: 20
  article-title: Reshaping data with the reshape package
  publication-title: Journal of Statistical Software
– volume: 106
  start-page: 265
  year: 2018
  end-page: 277
  article-title: Below‐ground complementarity effects in a grassland biodiversity experiment are related to deep‐rooting species
  publication-title: Journal of Ecology
– volume: 2
  start-page: 113
  year: 1993
  end-page: 118
  article-title: ITS primers with enhanced specificity for basidiomycetes – application to the identification of mycorrhizae and rusts
  publication-title: Molecular Ecology
– year: 2007
– volume: 103
  start-page: 538
  year: 2013
  end-page: 544
  article-title: Hidden host plant associations of soilborne fungal pathogens: an ecological perspective
  publication-title: Phytopathology
– volume: 31
  start-page: 27
  year: 1981
  end-page: 30
  article-title: Gravi attacchi di f.sp. su crisantemo in Italia
  publication-title: Informatore Fitopatologico
– volume: 29
  start-page: 56
  year: 2007
  end-page: 62
  article-title: The pathogenicity of on turfgrass
  publication-title: Canadian Journal of Plant Pathology
– volume: 7
  start-page: 1852
  year: 2013
  end-page: 1861
  article-title: Strong coupling of plant and fungal community structure across western Amazonian rainforests
  publication-title: ISME Journal
– volume: 93
  start-page: 511
  year: 2012
  end-page: 520
  article-title: Evaluating the impacts of multiple generalist fungal pathogens on temperate tree seedling survival
  publication-title: Ecology
– volume: 123
  start-page: 1528
  year: 2014
  end-page: 1536
  article-title: Long‐term study of root biomass in a biodiversity experiment reveals shifts in diversity effects over time
  publication-title: Oikos
– volume: 84
  start-page: 222
  year: 1994
  end-page: 225
  article-title: Root camouflage and disease‐control
  publication-title: Phytopathology
– volume: 279
  start-page: 3020
  year: 2012
  end-page: 3026
  article-title: Plant‐soil feedbacks provide an additional explanation for diversity–productivity relationships
  publication-title: Proceedings of the Royal Society of London B: Biological Sciences
– volume: 8
  start-page: 947
  year: 2008
  end-page: 953
  article-title: Unravelling belowground plant distributions: a real time PCR method for quantifying species proportions in mixed root samples
  publication-title: Molecular Ecology Notes
– volume: 26
  start-page: 4085
  year: 2017
  end-page: 4098
  article-title: Differential responses of soil bacteria, fungi, archaea and protists to plant species richness and plant functional group identity
  publication-title: Molecular Ecology
– year: 2016
– volume: 95
  start-page: 1907
  year: 2014
  end-page: 1917
  article-title: Higher plant diversity promotes higher diversity of fungal pathogens, while it decreases pathogen infection per plant
  publication-title: Ecology
– volume: 104
  start-page: 18123
  year: 2007
  end-page: 18128
  article-title: Impacts of plant diversity on biomass production increase through time because of species complementarity
  publication-title: Proceedings of the National Academy of Sciences, USA
– volume: 40
  start-page: 13
  year: 2002
  end-page: 43
  article-title: Evolutionary ecology of plant diseases in natural ecosystems
  publication-title: Annual Review of Phytopathology
– volume: 215
  start-page: 403
  year: 1990
  end-page: 410
  article-title: Basic local alignment search tool
  publication-title: Journal of Molecular Biology
– volume: 346
  start-page: 1256688
  year: 2014
  article-title: Global diversity and geography of soil fungi
  publication-title: Science
– volume: 102
  start-page: 695
  year: 2005
  end-page: 700
  article-title: Diversity‐productivity relationships: initial effects, long‐term patterns, and underlying mechanisms
  publication-title: Proceedings of the National Academy of Sciences, USA
– volume: 206
  start-page: 107
  year: 2015
  end-page: 117
  article-title: Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology
  publication-title: New Phytologist
– volume: 7
  start-page: 574
  year: 2004
  end-page: 583
  article-title: Biodiversity effects increase linearly with biotope space
  publication-title: Ecology Letters
– volume: 7
  start-page: 335
  year: 2010
  end-page: 336
  article-title: QIIME allows analysis of high‐throughput community sequencing data
  publication-title: Nature Methods
– volume: 466
  start-page: 752
  year: 2010
  end-page: 755
  article-title: Negative plant‐soil feedback predicts tree‐species relative abundance in a tropical forest
  publication-title: Nature
– volume: 9
  start-page: 569
  year: 2006
  end-page: 574
  article-title: Plant pathogens drive density‐dependent seedling mortality in a tropical tree
  publication-title: Ecology Letters
– volume: 484
  start-page: 186
  year: 2012
  end-page: 194
  article-title: Emerging fungal threats to animal, plant and ecosystem health
  publication-title: Nature
– volume: 24
  start-page: 3206
  year: 2015
  end-page: 3216
  article-title: Fine‐scale belowground species associations in temperate grassland
  publication-title: Molecular Ecology
– volume: 57
  start-page: 1281
  year: 1976
  end-page: 1288
  article-title: Underground niche separation in successional plants
  publication-title: Ecology
– volume: 11
  start-page: 2294
  year: 2017
  end-page: 2304
  article-title: Shifts in rhizosphere fungal community during secondary succession following abandonment from agriculture
  publication-title: ISME Journal
– year: 2013
– volume: 336
  start-page: 904
  year: 2012
  end-page: 907
  article-title: Conspecific negative density dependence and forest diversity
  publication-title: Science
– volume: 417
  start-page: 67
  year: 2002
  end-page: 70
  article-title: Feedback with soil biota contributes to plant rarity and invasiveness in communities
  publication-title: Nature
– volume: 114
  start-page: 11458
  year: 2017
  end-page: 11463
  article-title: Soilborne fungi have host affinity and host‐specific effects on seed germination and survival in a lowland tropical forest
  publication-title: Proceedings of the National Academy of Sciences, USA
– ident: e_1_2_7_33_1
  doi: 10.1073/pnas.0607968104
– ident: e_1_2_7_13_1
  doi: 10.1080/07352689209382349
– ident: e_1_2_7_8_1
  doi: 10.1007/BF00377135
– ident: e_1_2_7_40_1
  doi: 10.1371/journal.pone.0164533
– ident: e_1_2_7_28_1
  doi: 10.1111/mec.13232
– ident: e_1_2_7_14_1
  doi: 10.1038/nmeth.f.303
– volume: 31
  start-page: 27
  year: 1981
  ident: e_1_2_7_30_1
  article-title: Gravi attacchi di Phoma chrysanthemicola f.sp. chrysanthemicoal su crisantemo in Italia
  publication-title: Informatore Fitopatologico
– ident: e_1_2_7_36_1
  doi: 10.1111/nph.13394
– ident: e_1_2_7_17_1
  doi: 10.1111/1365-2745.12650
– ident: e_1_2_7_31_1
  doi: 10.1146/annurev.phyto.40.021202.110417
– ident: e_1_2_7_4_1
– ident: e_1_2_7_78_1
  doi: 10.1111/j.1365-294X.2010.04948.x
– ident: e_1_2_7_10_1
  doi: 10.1007/978-1-4419-7976-6
– ident: e_1_2_7_11_1
  doi: 10.1111/nph.13132
– ident: e_1_2_7_39_1
  doi: 10.3852/09-316
– ident: e_1_2_7_49_1
  doi: 10.3852/12-359
– ident: e_1_2_7_16_1
– ident: e_1_2_7_46_1
  doi: 10.1038/ncomms7707
– ident: e_1_2_7_37_1
  doi: 10.1890/11-0598.1
– ident: e_1_2_7_59_1
  doi: 10.1111/1365-2745.12877
– ident: e_1_2_7_68_1
  doi: 10.1038/nmeth0910-668b
– ident: e_1_2_7_64_1
  doi: 10.1038/ismej.2013.66
– ident: e_1_2_7_71_1
  doi: 10.1111/j.1600-0706.2008.17119.x
– ident: e_1_2_7_53_1
  doi: 10.1111/j.1365-2745.2010.01702.x
– ident: e_1_2_7_51_1
  doi: 10.1038/nature09273
– volume-title: Mycorrhizal symbiosis
  year: 2008
  ident: e_1_2_7_74_1
– ident: e_1_2_7_15_1
  doi: 10.1073/pnas.0709069104
– ident: e_1_2_7_82_1
  doi: 10.1007/978-0-387-98141-3
– ident: e_1_2_7_56_1
  doi: 10.1111/nph.13677
– ident: e_1_2_7_67_1
  doi: 10.1111/oik.01502
– ident: e_1_2_7_61_1
  doi: 10.1007/BF01974782
– ident: e_1_2_7_24_1
  doi: 10.1093/bioinformatics/btq461
– ident: e_1_2_7_25_1
  doi: 10.1093/bioinformatics/btr381
– ident: e_1_2_7_76_1
  doi: 10.1016/j.soilbio.2015.06.012
– ident: e_1_2_7_81_1
  doi: 10.18637/jss.v021.i12
– ident: e_1_2_7_60_1
  doi: 10.1890/04-1122
– ident: e_1_2_7_54_1
  doi: 10.1111/j.1755-0998.2008.02130.x
– ident: e_1_2_7_12_1
  doi: 10.1080/07060660709507437
– ident: e_1_2_7_72_1
  doi: 10.1073/pnas.1706324114
– ident: e_1_2_7_47_1
  doi: 10.1111/nph.12778
– ident: e_1_2_7_50_1
  doi: 10.1094/PHYTO-08-12-0192-LE
– ident: e_1_2_7_9_1
  doi: 10.1146/annurev-ecolsys-112414-054306
– ident: e_1_2_7_44_1
  doi: 10.1098/rspb.2012.0285
– ident: e_1_2_7_55_1
  doi: 10.1890/12-1399.1
– ident: e_1_2_7_29_1
  doi: 10.1111/j.1365-294X.1993.tb00005.x
– ident: e_1_2_7_45_1
– volume-title: Compendium of soil fungi
  year: 2007
  ident: e_1_2_7_21_1
– volume: 84
  start-page: 222
  year: 1994
  ident: e_1_2_7_32_1
  article-title: Root camouflage and disease‐control
  publication-title: Phytopathology
– ident: e_1_2_7_65_1
  doi: 10.1890/07-2056.1
– ident: e_1_2_7_69_1
  doi: 10.1890/13-2317.1
– ident: e_1_2_7_48_1
  doi: 10.1038/ncomms10017
– ident: e_1_2_7_20_1
  doi: 10.1111/j.1461-0248.2004.00607.x
– ident: e_1_2_7_34_1
  doi: 10.1038/ismej.2017.90
– ident: e_1_2_7_73_1
  doi: 10.1890/10-0773.1
– ident: e_1_2_7_3_1
  doi: 10.1016/S0022-2836(05)80360-2
– ident: e_1_2_7_2_1
  doi: 10.1094/PDIS-94-5-0492
– ident: e_1_2_7_41_1
  doi: 10.1111/j.1365-294X.2010.04989.x
– ident: e_1_2_7_35_1
  doi: 10.1111/1365-2745.12032
– ident: e_1_2_7_18_1
  doi: 10.1111/1365-2745.12280
– ident: e_1_2_7_42_1
  doi: 10.1111/j.1365-2745.2005.01000.x
– ident: e_1_2_7_23_1
  doi: 10.1038/ismej.2009.122
– ident: e_1_2_7_6_1
  doi: 10.1126/science.1171661
– ident: e_1_2_7_57_1
  doi: 10.1016/j.funeco.2015.06.006
– ident: e_1_2_7_58_1
– ident: e_1_2_7_66_1
– ident: e_1_2_7_38_1
  doi: 10.1126/science.1220269
– ident: e_1_2_7_77_1
  doi: 10.1038/nature04742
– ident: e_1_2_7_62_1
  doi: 10.1038/nature14372
– ident: e_1_2_7_5_1
  doi: 10.18637/jss.v067.i01
– ident: e_1_2_7_43_1
  doi: 10.1111/j.1365-2745.2011.01906.x
– ident: e_1_2_7_80_1
  doi: 10.1016/B978-0-12-372180-8.50042-1
– ident: e_1_2_7_63_1
  doi: 10.2307/1935052
– ident: e_1_2_7_75_1
  doi: 10.1126/science.1256688
– ident: e_1_2_7_7_1
  doi: 10.1111/j.1461-0248.2006.00905.x
– start-page: 155
  volume-title: Hydrocarbon and lipid microbiology protocols: microbial quantitation, community profiling and array approaches
  year: 2017
  ident: e_1_2_7_22_1
– ident: e_1_2_7_27_1
  doi: 10.1038/nature10947
– ident: e_1_2_7_26_1
– ident: e_1_2_7_79_1
  doi: 10.1186/s40168-017-0237-y
– ident: e_1_2_7_52_1
  doi: 10.1111/j.1461-0248.2010.01547.x
– ident: e_1_2_7_70_1
  doi: 10.1073/pnas.0407524102
– ident: e_1_2_7_19_1
  doi: 10.1111/mec.14175
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Snippet There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently,...
Summary There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated....
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StartPage 542
SubjectTerms Biodiversity
Biomass
BIOS Applied Bioinformatics
community structure
density dependence
fungal communities
fungal community composition
Fungi - pathogenicity
Fungi - physiology
grasslands
high-throughput nucleotide sequencing
host specificity
Host-Pathogen Interactions
Models, Biological
Nature Conservation and Plant Ecology
Natuurbeheer en Plantenecologie
neighbour identity
pathogenicity
pathogens
PE&RC
Plant Development
Plant Ecology and Nature Conservation
plant growth
Plant Roots - genetics
Plant Roots - microbiology
Plantenecologie en Natuurbeheer
Plants - microbiology
PRI BIOS Applied Bioinformatics
root distribution
root‐associated fungi
soil fungi
Soil Microbiology
species diversity
Species Specificity
WIMEK
Subtitle the interactions between soil-borne fungi, biodiversity and plant productivity
Title Lost in diversity
URI https://www.jstor.org/stable/90019931
https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fnph.15036
https://www.ncbi.nlm.nih.gov/pubmed/29468690
https://www.proquest.com/docview/2007423789
https://www.proquest.com/docview/2067303593
https://pubmed.ncbi.nlm.nih.gov/PMC5887887
http://www.narcis.nl/publication/RecordID/oai:library.wur.nl:wurpubs%2F534533
Volume 218
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