Tumor necrosis factor-α polymorphisms in women with idiopathic recurrent miscarriage
We investigated the association of tumor necrosis factor-α (TNFα) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFα −1031T/C, −863C/A, −857C/T, −376G/A, −308G/A, −238G/A, and +488G/A single nucleotide polymorphisms (SNPs) were investigated in 204 RM women and 248 age-matched parous...
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Published in | Journal of reproductive immunology Vol. 84; no. 2; pp. 186 - 192 |
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Main Authors | , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Kidlington
Elsevier Ireland Ltd
01.03.2010
Elsevier |
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Online Access | Get full text |
ISSN | 0165-0378 1872-7603 1872-7603 |
DOI | 10.1016/j.jri.2009.12.005 |
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Abstract | We investigated the association of tumor necrosis factor-α (TNFα) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFα −1031T/C, −863C/A, −857C/T, −376G/A, −308G/A, −238G/A, and +488G/A single nucleotide polymorphisms (SNPs) were investigated in 204 RM women and 248 age-matched parous women by PCR-restriction fragment length polymorphism. Significantly higher frequencies of −1031C and −376A alleles were seen in RM patients; significant differences were also noted in the distribution of −1031T/C, −376G/A, and −238G/A genotypes between case and control subjects. Haploview analysis revealed high linkage disequilibrium between −857C/T and +488G/A SNPs, but was lower between the other polymorphisms. Of the possible 52 seven-locus haplotypes constructed, 10 were common, and were included in subsequent analysis. Increased frequency of CCCGGGG and CCCGGAA haplotypes, and reduced frequency of TCCGGGG and TCCGGGA haplotypes were seen in RM patients than in controls. When the Bonferroni correction was applied, differences were significant for the CCCGGAA haplotype, which was higher (OR
=
4.14; 95% CI
=
1.84–8.95), and the TCCGGGA haplotype, which were lower among RM cases (OR
=
0.09; 95% CI
=
0.02–0.68), thereby conferring RM susceptibility and protection to these haplotypes, respectively. Multivariate analysis confirmed the positive association of only CCCGGAA haplotype with RM (
P
=
0.010; aOR
=
2.03; 95% CI
=
1.18–4.47), after controlling for a number of covariates. These results demonstrate that the TNFα polymorphisms, in particular the −1031T/C variant, are significantly associated with idiopathic RM. Additional replication studies on other racial groups are needed to confirm our findings. |
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AbstractList | Abstract We investigated the association of tumor necrosis factor-α (TNFα) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFα −1031T/C, −863C/A, −857C/T, −376G/A, −308G/A, −238G/A, and +488G/A single nucleotide polymorphisms (SNPs) were investigated in 204 RM women and 248 age-matched parous women by PCR-restriction fragment length polymorphism. Significantly higher frequencies of −1031C and −376A alleles were seen in RM patients; significant differences were also noted in the distribution of −1031T/C, −376G/A, and −238G/A genotypes between case and control subjects. Haploview analysis revealed high linkage disequilibrium between −857C/T and +488G/A SNPs, but was lower between the other polymorphisms. Of the possible 52 seven-locus haplotypes constructed, 10 were common, and were included in subsequent analysis. Increased frequency of CCCGGGG and CCCGGAA haplotypes, and reduced frequency of TCCGGGG and TCCGGGA haplotypes were seen in RM patients than in controls. When the Bonferroni correction was applied, differences were significant for the CCCGGAA haplotype, which was higher (OR = 4.14; 95% CI = 1.84–8.95), and the TCCGGGA haplotype, which were lower among RM cases (OR = 0.09; 95% CI = 0.02–0.68), thereby conferring RM susceptibility and protection to these haplotypes, respectively. Multivariate analysis confirmed the positive association of only CCCGGAA haplotype with RM ( P = 0.010; aOR = 2.03; 95% CI = 1.18–4.47), after controlling for a number of covariates. These results demonstrate that the TNFα polymorphisms, in particular the −1031T/C variant, are significantly associated with idiopathic RM. Additional replication studies on other racial groups are needed to confirm our findings. We investigated the association of tumor necrosis factor-alpha (TNFalpha) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFalpha -1031T/C, -863C/A, -857C/T, -376G/A, -308G/A, -238G/A, and +488G/A single nucleotide polymorphisms (SNPs) were investigated in 204 RM women and 248 age-matched parous women by PCR-restriction fragment length polymorphism. Significantly higher frequencies of -1031C and -376A alleles were seen in RM patients; significant differences were also noted in the distribution of -1031T/C, -376G/A, and -238G/A genotypes between case and control subjects. Haploview analysis revealed high linkage disequilibrium between -857C/T and +488G/A SNPs, but was lower between the other polymorphisms. Of the possible 52 seven-locus haplotypes constructed, 10 were common, and were included in subsequent analysis. Increased frequency of CCCGGGG and CCCGGAA haplotypes, and reduced frequency of TCCGGGG and TCCGGGA haplotypes were seen in RM patients than in controls. When the Bonferroni correction was applied, differences were significant for the CCCGGAA haplotype, which was higher (OR=4.14; 95% CI=1.84-8.95), and the TCCGGGA haplotype, which were lower among RM cases (OR=0.09; 95% CI=0.02-0.68), thereby conferring RM susceptibility and protection to these haplotypes, respectively. Multivariate analysis confirmed the positive association of only CCCGGAA haplotype with RM (P=0.010; aOR=2.03; 95% CI=1.18-4.47), after controlling for a number of covariates. These results demonstrate that the TNFalpha polymorphisms, in particular the -1031T/C variant, are significantly associated with idiopathic RM. Additional replication studies on other racial groups are needed to confirm our findings.We investigated the association of tumor necrosis factor-alpha (TNFalpha) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFalpha -1031T/C, -863C/A, -857C/T, -376G/A, -308G/A, -238G/A, and +488G/A single nucleotide polymorphisms (SNPs) were investigated in 204 RM women and 248 age-matched parous women by PCR-restriction fragment length polymorphism. Significantly higher frequencies of -1031C and -376A alleles were seen in RM patients; significant differences were also noted in the distribution of -1031T/C, -376G/A, and -238G/A genotypes between case and control subjects. Haploview analysis revealed high linkage disequilibrium between -857C/T and +488G/A SNPs, but was lower between the other polymorphisms. Of the possible 52 seven-locus haplotypes constructed, 10 were common, and were included in subsequent analysis. Increased frequency of CCCGGGG and CCCGGAA haplotypes, and reduced frequency of TCCGGGG and TCCGGGA haplotypes were seen in RM patients than in controls. When the Bonferroni correction was applied, differences were significant for the CCCGGAA haplotype, which was higher (OR=4.14; 95% CI=1.84-8.95), and the TCCGGGA haplotype, which were lower among RM cases (OR=0.09; 95% CI=0.02-0.68), thereby conferring RM susceptibility and protection to these haplotypes, respectively. Multivariate analysis confirmed the positive association of only CCCGGAA haplotype with RM (P=0.010; aOR=2.03; 95% CI=1.18-4.47), after controlling for a number of covariates. These results demonstrate that the TNFalpha polymorphisms, in particular the -1031T/C variant, are significantly associated with idiopathic RM. Additional replication studies on other racial groups are needed to confirm our findings. We investigated the association of tumor necrosis factor-alpha (TNFalpha) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFalpha -1031T/C, -863C/A, -857C/T, -376G/A, -308G/A, -238G/A, and +488G/A single nucleotide polymorphisms (SNPs) were investigated in 204 RM women and 248 age-matched parous women by PCR-restriction fragment length polymorphism. Significantly higher frequencies of -1031C and -376A alleles were seen in RM patients; significant differences were also noted in the distribution of -1031T/C, -376G/A, and -238G/A genotypes between case and control subjects. Haploview analysis revealed high linkage disequilibrium between -857C/T and +488G/A SNPs, but was lower between the other polymorphisms. Of the possible 52 seven-locus haplotypes constructed, 10 were common, and were included in subsequent analysis. Increased frequency of CCCGGGG and CCCGGAA haplotypes, and reduced frequency of TCCGGGG and TCCGGGA haplotypes were seen in RM patients than in controls. When the Bonferroni correction was applied, differences were significant for the CCCGGAA haplotype, which was higher (OR=4.14; 95% CI=1.84-8.95), and the TCCGGGA haplotype, which were lower among RM cases (OR=0.09; 95% CI=0.02-0.68), thereby conferring RM susceptibility and protection to these haplotypes, respectively. Multivariate analysis confirmed the positive association of only CCCGGAA haplotype with RM (P=0.010; aOR=2.03; 95% CI=1.18-4.47), after controlling for a number of covariates. These results demonstrate that the TNFalpha polymorphisms, in particular the -1031T/C variant, are significantly associated with idiopathic RM. Additional replication studies on other racial groups are needed to confirm our findings. We investigated the association of tumor necrosis factor-α (TNFα) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFα −1031T/C, −863C/A, −857C/T, −376G/A, −308G/A, −238G/A, and +488G/A single nucleotide polymorphisms (SNPs) were investigated in 204 RM women and 248 age-matched parous women by PCR-restriction fragment length polymorphism. Significantly higher frequencies of −1031C and −376A alleles were seen in RM patients; significant differences were also noted in the distribution of −1031T/C, −376G/A, and −238G/A genotypes between case and control subjects. Haploview analysis revealed high linkage disequilibrium between −857C/T and +488G/A SNPs, but was lower between the other polymorphisms. Of the possible 52 seven-locus haplotypes constructed, 10 were common, and were included in subsequent analysis. Increased frequency of CCCGGGG and CCCGGAA haplotypes, and reduced frequency of TCCGGGG and TCCGGGA haplotypes were seen in RM patients than in controls. When the Bonferroni correction was applied, differences were significant for the CCCGGAA haplotype, which was higher (OR = 4.14; 95% CI = 1.84–8.95), and the TCCGGGA haplotype, which were lower among RM cases (OR = 0.09; 95% CI = 0.02–0.68), thereby conferring RM susceptibility and protection to these haplotypes, respectively. Multivariate analysis confirmed the positive association of only CCCGGAA haplotype with RM ( P = 0.010; aOR = 2.03; 95% CI = 1.18–4.47), after controlling for a number of covariates. These results demonstrate that the TNFα polymorphisms, in particular the −1031T/C variant, are significantly associated with idiopathic RM. Additional replication studies on other racial groups are needed to confirm our findings. We investigated the association of tumor necrosis factor- alpha (TNF alpha ) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNF alpha a degree 1031T/C, a degree 863C/A, a degree 857C/T, a degree 376G/A, a degree 308G/A, a degree 238G/A, and +488G/A single nucleotide polymorphisms (SNPs) were investigated in 204 RM women and 248 age-matched parous women by PCR-restriction fragment length polymorphism. Significantly higher frequencies of a degree 1031C and a degree 376A alleles were seen in RM patients; significant differences were also noted in the distribution of a degree 1031T/C, a degree 376G/A, and a degree 238G/A genotypes between case and control subjects. Haploview analysis revealed high linkage disequilibrium between a degree 857C/T and +488G/A SNPs, but was lower between the other polymorphisms. Of the possible 52 seven-locus haplotypes constructed, 10 were common, and were included in subsequent analysis. Increased frequency of CCCGGGG and CCCGGAA haplotypes, and reduced frequency of TCCGGGG and TCCGGGA haplotypes were seen in RM patients than in controls. When the Bonferroni correction was applied, differences were significant for the CCCGGAA haplotype, which was higher (OR=4.14; 95% CI=1.84-8.95), and the TCCGGGA haplotype, which were lower among RM cases (OR=0.09; 95% CI=0.02-0.68), thereby conferring RM susceptibility and protection to these haplotypes, respectively. Multivariate analysis confirmed the positive association of only CCCGGAA haplotype with RM (P =0.010; aOR=2.03; 95% CI=1.18-4.47), after controlling for a number of covariates. These results demonstrate that the TNF alpha polymorphisms, in particular the a degree 1031T/C variant, are significantly associated with idiopathic RM. Additional replication studies on other racial groups are needed to confirm our findings. |
Author | Mustafa, F.E. Madan, S. Almawi, W.Y. Finan, R.R. Al-Zaman, I. Al-Khateeb, G.M. Mohammed, F.A. Al-Irhayim, Z. Issa, A.A. |
Author_xml | – sequence: 1 givenname: R.R. surname: Finan fullname: Finan, R.R. organization: Faculty of Medicine, Universite St Joseph, Beirut, Lebanon – sequence: 2 givenname: Z. surname: Al-Irhayim fullname: Al-Irhayim, Z. organization: College of Medicine and Medical Sciences, Arabian Gulf University, Manama, Bahrain – sequence: 3 givenname: F.E. surname: Mustafa fullname: Mustafa, F.E. organization: College of Medicine and Medical Sciences, Arabian Gulf University, Manama, Bahrain – sequence: 4 givenname: I. surname: Al-Zaman fullname: Al-Zaman, I. organization: Department of Obstetrics & Gynecology, Salmaniya Medical Complex, Manama, Bahrain – sequence: 5 givenname: F.A. surname: Mohammed fullname: Mohammed, F.A. organization: Department of Obstetrics & Gynecology, Salmaniya Medical Complex, Manama, Bahrain – sequence: 6 givenname: G.M. surname: Al-Khateeb fullname: Al-Khateeb, G.M. organization: College of Medicine and Medical Sciences, Arabian Gulf University, Manama, Bahrain – sequence: 7 givenname: S. surname: Madan fullname: Madan, S. organization: Department of Obstetrics & Gynecology, Salmaniya Medical Complex, Manama, Bahrain – sequence: 8 givenname: A.A. surname: Issa fullname: Issa, A.A. organization: College of Medicine and Medical Sciences, Arabian Gulf University, Manama, Bahrain – sequence: 9 givenname: W.Y. surname: Almawi fullname: Almawi, W.Y. email: wassim@agu.edu.bh organization: College of Medicine and Medical Sciences, Arabian Gulf University, Manama, Bahrain |
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Keywords | Recurrent miscarriage Polymorphisms Tumor necrosis factor Human Relapse Pregnancy disorders Cytokine Idiopathic Abortion Vertebrata Mammalia Female Tumor necrosis factor α Polymorphism |
Language | English |
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Snippet | We investigated the association of tumor necrosis factor-α (TNFα) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFα −1031T/C, −863C/A,... Abstract We investigated the association of tumor necrosis factor-α (TNFα) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFα −1031T/C,... We investigated the association of tumor necrosis factor-alpha (TNFalpha) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNFalpha -1031T/C,... We investigated the association of tumor necrosis factor- alpha (TNF alpha ) gene polymorphisms with idiopathic recurrent miscarriage (RM). TNF alpha a degree... |
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SubjectTerms | Abortion, Habitual - epidemiology Abortion, Habitual - genetics Abortion, Habitual - immunology Adult Arabs Bahrain Biological and medical sciences Case-Control Studies DNA Mutational Analysis Embryology: invertebrates and vertebrates. Teratology Female Fundamental and applied biological sciences. Psychology Gene Frequency Genetic Association Studies Genetic Predisposition to Disease Genotype Humans Obstetrics and Gynecology Polymorphism, Genetic Polymorphisms Recurrent miscarriage Retrospective Studies Tumor necrosis factor Tumor Necrosis Factor-alpha - genetics Tumor Necrosis Factor-alpha - immunology Tumor Necrosis Factor-alpha - metabolism |
Title | Tumor necrosis factor-α polymorphisms in women with idiopathic recurrent miscarriage |
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