Genetic and Neutralization Properties of Subtype C Human Immunodeficiency Virus Type 1 Molecular env Clones from Acute and Early Heterosexually Acquired Infections in Southern Africa

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Published inJournal of Virology Vol. 80; no. 23; pp. 11776 - 11790
Main Authors MING LI, SALAZAR-GONZALEZ, Jesus F, MLISANA, Koleka, ABDOOL KARIM, Salim, KUNXUE HONG, GREENE, Kelli M, BILSKA, Miroslawa, JINTAO ZHOU, ALLEN, Susan, CHOMBA, Elwyn, MULENGA, Joseph, VWALIKA, Cheswa, DERDEYN, Cynthia A, FENG GAO, MING ZHANG, KORBER, Bette T. M, HUNTER, Eric, HAHN, Beatrice H, MONTEFIORI, David C, MORRIS, Lynn, WILLIAMSON, Carolyn, ROBINSON, James E, DECKER, Julie M, YINGYING LI, SALAZAR, Maria G, POLONIS, Victoria R
Format Journal Article
LanguageEnglish
Published Washington, DC American Society for Microbiology 01.12.2006
Subjects
Biological and medical sciences
Fundamental and applied biological sciences. Psychology
Gene Products, env - chemistry
Gene Products, env - genetics
Gene Products, env - immunology
Genetics
Heterosexuality
HIV Antibodies - blood
HIV Infections - transmission
HIV Infections - virology
HIV-1 - classification
HIV-1 - genetics
HIV-1 - immunology
Human immunodeficiency virus 1
Human viral diseases
Humans
Infectious diseases
Medical sciences
Microbiology
Miscellaneous
Molecular Sequence Data
Neutralization Tests
Pathogenesis and Immunity
Phylogeny
Sequence Analysis, DNA
South Africa
Viral diseases
Viral diseases of the lymphoid tissue and the blood. Aids
Virology
Southern Africa
Africa
South Africa
Immunopathology
HIV-1 virus
Acute
Retroviridae
AIDS
Immune deficiency
Lentivirus
Virology
Infection
Virus
Viral disease
Genetics
Human immunodeficiency virus
Subtype
Neutralization
Online AccessGet full text

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Abstract Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit StumbleUpon Twitter current issue Spotlights in the Current Issue JVI About JVI Subscribers Authors Reviewers Advertisers Inquiries from the Press Permissions & Commercial Reprints ASM Journals Public Access Policy JVI RSS Feeds 1752 N Street N.W. • Washington DC 20036 202.737.3600 • 202.942.9355 fax • journals@asmusa.org Print ISSN: 0022-538X Online ISSN: 1098-5514 Copyright © 2014 by the American Society for Microbiology.   For an alternate route to JVI .asm.org, visit: JVI       
AbstractList A standard panel of subtype C human immunodeficiency virus type 1 (HIV-1) Env-pseudotyped viruses was created by cloning, sequencing, and characterizing functional gp160 genes from 18 acute and early heterosexually acquired infections in South Africa and Zambia. In general, the gp120 region of these clones was shorter (most evident in V1 and V4) and less glycosylated compared to newly transmitted subtype B viruses, and it was underglycosylated but no different in length compared to chronic subtype C viruses. The gp120s also exhibited low amino acid sequence variability (12%) in V3 and high variability (39%) immediately downstream of V3, a feature shared with newly transmitted subtype B viruses and chronic viruses of both subtypes. When tested as Env-pseudotyped viruses in a luciferase reporter gene assay, all clones possessed an R5 phenotype and resembled primary isolates in their sensitivity to neutralization by HIV-1-positive plasmas. Results obtained with a multisubtype plasma panel suggested partial subtype preference in the neutralizing antibody response to infection. The clones were typical of subtype C in that all were resistant to 2G12 (associated with loss of N-glycosylation at position 295) and most were resistant to 2F5, but all were sensitive to 4E10 and many were sensitive to immunoglobulin G1b12. Finally, conserved neutralization epitopes in the CD4-induced coreceptor binding domain of gp120 were poorly accessible and were difficult to induce and stabilize with soluble CD4 on Env-pseudotyped viruses. These results illustrate key genetic and antigenic properties of subtype C HIV-1 that might impact the design and testing of candidate vaccines. A subset of these gp160 clones are suitable for use as reference reagents to facilitate standardized assessments of vaccine-elicited neutralizing antibody responses.
Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit StumbleUpon Twitter current issue Spotlights in the Current Issue JVI About JVI Subscribers Authors Reviewers Advertisers Inquiries from the Press Permissions & Commercial Reprints ASM Journals Public Access Policy JVI RSS Feeds 1752 N Street N.W. • Washington DC 20036 202.737.3600 • 202.942.9355 fax • journals@asmusa.org Print ISSN: 0022-538X Online ISSN: 1098-5514 Copyright © 2014 by the American Society for Microbiology.   For an alternate route to JVI .asm.org, visit: JVI       
Author Ming Li
Beatrice H. Hahn
David C. Montefiori
Cheswa Vwalika
Victoria R. Polonis
Yingying Li
Salim Abdool Karim
Elwyn Chomba
Maria G. Salazar
Kelli M. Greene
Jintao Zhou
Jesus F. Salazar-Gonzalez
Kunxue Hong
Carolyn Williamson
Julie M. Decker
Joseph Mulenga
James E. Robinson
Ming Zhang
Cynthia A. Derdeyn
Bette T. M. Korber
Feng Gao
Miroslawa Bilska
Koleka Mlisana
Lynn Morris
Susan Allen
Eric Hunter
AuthorAffiliation Departments of Surgery, 1 Medicine, Duke University Medical Center, Durham, North Carolina 27710, 14 Department of Medicine, University of Alabama, Birmingham, Alabama 35294, 2 Department of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia 30329, 3 National Institute for Communicable Diseases, Johannesburg, South Africa, 4 Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Cape Town, South Africa, 5 Department of Pediatrics, Tulane University Medical Center, New Orleans, Louisiana 70112, 6 Walter Reed Army Institute of Research, Rockville, Maryland 20850, 7 CAPRISA, University of KwaZulu-Natal, Durban, South Africa, 8 Division of Virology and Immunology, National Center for AIDS, Beijing, China, 9 Department of Global Health, Emory University, Atlanta, Georgia, 10 University Teaching Hospital, 11 Zambia National Blood Transfusion Service, 12 Zambia-Emory HIV Research Program, Lusaka, Zambia, 13 Los Alamos National Laboratory, Los Alam
AuthorAffiliation_xml – name: Departments of Surgery, 1 Medicine, Duke University Medical Center, Durham, North Carolina 27710, 14 Department of Medicine, University of Alabama, Birmingham, Alabama 35294, 2 Department of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia 30329, 3 National Institute for Communicable Diseases, Johannesburg, South Africa, 4 Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Cape Town, South Africa, 5 Department of Pediatrics, Tulane University Medical Center, New Orleans, Louisiana 70112, 6 Walter Reed Army Institute of Research, Rockville, Maryland 20850, 7 CAPRISA, University of KwaZulu-Natal, Durban, South Africa, 8 Division of Virology and Immunology, National Center for AIDS, Beijing, China, 9 Department of Global Health, Emory University, Atlanta, Georgia, 10 University Teaching Hospital, 11 Zambia National Blood Transfusion Service, 12 Zambia-Emory HIV Research Program, Lusaka, Zambia, 13 Los Alamos National Laboratory, Los Alamos, New Mexico 87545 15
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  surname: MING LI
  fullname: MING LI
  organization: Department of Surgery, Duke University Medical Center, Durham, North Carolina 27710, United States
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  givenname: Jesus F
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  fullname: ALLEN, Susan
  organization: Department of Global Health, Emory University, Atlanta, Georgia, United States
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  givenname: Cynthia A
  surname: DERDEYN
  fullname: DERDEYN, Cynthia A
  organization: Department of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia 30329, United States
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  surname: FENG GAO
  fullname: FENG GAO
  organization: Department of Medicine, Duke University Medical Center, Durham, North Carolina 27710, United States
– sequence: 15
  surname: MING ZHANG
  fullname: MING ZHANG
  organization: Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
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  givenname: Bette T. M
  surname: KORBER
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  surname: ROBINSON
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  organization: Department of Pediatrics, Tulane University Medical Center, New Orleans, Louisiana 70112, United States
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BackLink http://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18299407$$DView record in Pascal Francis
https://www.ncbi.nlm.nih.gov/pubmed/16971434$$D View this record in MEDLINE/PubMed
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Issue 23
Keywords Immunopathology
HIV-1 virus
Acute
Retroviridae
AIDS
Immune deficiency
Lentivirus
Virology
Infection
Virus
Viral disease
Genetics
Human immunodeficiency virus
Subtype
Neutralization
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content type line 23
Corresponding author. Mailing address: Department of Surgery, Laboratory for AIDS Vaccine Research and Development, P.O. Box 2926, Duke University Medical Center, Durham, NC 27710. Phone: (919) 684-5278. Fax: (919) 684-4288. E-mail: monte@acpub.duke.edu.
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Snippet Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley...
A standard panel of subtype C human immunodeficiency virus type 1 (HIV-1) Env-pseudotyped viruses was created by cloning, sequencing, and characterizing...
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SubjectTerms Biological and medical sciences
Fundamental and applied biological sciences. Psychology
Gene Products, env - chemistry
Gene Products, env - genetics
Gene Products, env - immunology
Genetics
Heterosexuality
HIV Antibodies - blood
HIV Infections - transmission
HIV Infections - virology
HIV-1 - classification
HIV-1 - genetics
HIV-1 - immunology
Human immunodeficiency virus 1
Human viral diseases
Humans
Infectious diseases
Medical sciences
Microbiology
Miscellaneous
Molecular Sequence Data
Neutralization Tests
Pathogenesis and Immunity
Phylogeny
Sequence Analysis, DNA
South Africa
Viral diseases
Viral diseases of the lymphoid tissue and the blood. Aids
Virology
Title Genetic and Neutralization Properties of Subtype C Human Immunodeficiency Virus Type 1 Molecular env Clones from Acute and Early Heterosexually Acquired Infections in Southern Africa
URI http://jvi.asm.org/content/80/23/11776.abstract
https://www.ncbi.nlm.nih.gov/pubmed/16971434
https://search.proquest.com/docview/19400062
https://search.proquest.com/docview/68145698
https://pubmed.ncbi.nlm.nih.gov/PMC1642599
Volume 80
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