AVOCADO: Visualization of Workflow-Derived Data Provenance for Reproducible Biomedical Research

• Published in: Computer graphics forum Vol. 35; no. 3; pp. 481 - 490
• Main Authors: Stitz, H., Luger, S., Streit, M., Gehlenborg, N.
• Format: Journal Article
• Language: English
• Published: England Blackwell Publishing Ltd 01.06.2016
• Subjects: Agglomeration; Analysis; Biomedical research; Categories and Subject Descriptors (according to ACM CCS); Complexity; Computer graphics; Graph theory; Graphs; H.5.2 [Information Systems]: Information Interfaces and Presentation-User Interfaces-Graphical user interfaces (GUI); J.3 [Life and Medical Science] Biology and genetics; Mathematical analysis; Platforms; Representations; Studies; Visualization; Workflow

A major challenge in data‐driven biomedical research lies in the collection and representation of data provenance information to ensure that findings are reproducibile. In order to communicate and reproduce multi‐step analysis workflows executed on datasets that contain data for dozens or hundreds o...