Dysregulation of the miRNA biogenesis components DICER1, DROSHA, DGCR8 and AGO2 in clear cell renal cell carcinoma in both a Korean cohort and the cancer genome atlas kidney clear cell carcinoma cohort
Impairment of microRNA (miRNA) biogenesis may be involved in clear cell renal cell carcinoma (ccRCC). The objective of the present study was to investigate the mRNA levels of important miRNA machinery components, , DiGeroge syndrome critical region gene 8 ( ), and Argonaute 2 ( ), and their correlat...
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Published in | Oncology letters Vol. 18; no. 4; pp. 4337 - 4345 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
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01.10.2019
Spandidos Publications UK Ltd D.A. Spandidos |
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Abstract | Impairment of microRNA (miRNA) biogenesis may be involved in clear cell renal cell carcinoma (ccRCC). The objective of the present study was to investigate the mRNA levels of important miRNA machinery components,
, DiGeroge syndrome critical region gene 8 (
), and Argonaute 2 (
), and their correlations with clinicopathological characteristics of ccRCC using mRNA expression data from The Cancer Genome Atlas kidney clear cell carcinoma (TCGA KIRC) cohort and a Korean ccRCC cohort. mRNA levels of
, and
were significantly decreased in both cohorts. However,
was significantly downregulated only in the Korean ccRCC cohort. Additionally, positive correlations were observed between the altered mRNA levels of
and
as well as
and
in both cohorts. In the TCGA KIRC cohort, alterations in the mRNA levels of
were significantly correlated with histological grade. Furthermore, the altered mRNA levels of
showed significant associations with sex and histologic grades. However, in the Korean ccRCC cohort, no factors were significantly associated with any clinicopathological parameters, including sex, age, T stage, Fuhrman grade/The International Society of Urological Pathology grade, lymphovascular invasion, and peri-renal fat invasion. Taken together, these findings indicate that
and
are significantly dysregulated in ccRCC, suggesting that they are important in the pathophysiology of this malignancy. |
---|---|
AbstractList | Impairment of microRNA (miRNA) biogenesis may be involved in clear cell renal cell carcinoma (ccRCC). The objective of the present study was to investigate the mRNA levels of important miRNA machinery components,
, DiGeroge syndrome critical region gene 8 (
), and Argonaute 2 (
), and their correlations with clinicopathological characteristics of ccRCC using mRNA expression data from The Cancer Genome Atlas kidney clear cell carcinoma (TCGA KIRC) cohort and a Korean ccRCC cohort. mRNA levels of
, and
were significantly decreased in both cohorts. However,
was significantly downregulated only in the Korean ccRCC cohort. Additionally, positive correlations were observed between the altered mRNA levels of
and
as well as
and
in both cohorts. In the TCGA KIRC cohort, alterations in the mRNA levels of
were significantly correlated with histological grade. Furthermore, the altered mRNA levels of
showed significant associations with sex and histologic grades. However, in the Korean ccRCC cohort, no factors were significantly associated with any clinicopathological parameters, including sex, age, T stage, Fuhrman grade/The International Society of Urological Pathology grade, lymphovascular invasion, and peri-renal fat invasion. Taken together, these findings indicate that
and
are significantly dysregulated in ccRCC, suggesting that they are important in the pathophysiology of this malignancy. Impairment of microRNA (miRNA) biogenesis may be involved in clear cell renal cell carcinoma (ccRCC). The objective of the present study was to investigate the mRNA levels of important miRNA machinery components, DICER1, DROSHA, DiGeroge syndrome critical region gene 8 (DGCR8), and Argonaute 2 (AGO2), and their correlations with clinicopathological characteristics of ccRCC using mRNA expression data from The Cancer Genome Atlas kidney clear cell carcinoma (TCGA KIRC) cohort and a Korean ccRCC cohort. mRNA levels of DICER1, DROSHA, and DGCR8 were significantly decreased in both cohorts. However, AGO2 was significantly downregulated only in the Korean ccRCC cohort. Additionally, positive correlations were observed between the altered mRNA levels of DICER1 and DROSHA as well as DROSHA and DGCR8 in both cohorts. In the TCGA KIRC cohort, alterations in the mRNA levels of DICER1 were significantly correlated with histological grade. Furthermore, the altered mRNA levels of DGCR8 showed significant associations with sex and histologic grades. However, in the Korean ccRCC cohort, no factors were significantly associated with any clinicopathological parameters, including sex, age, T stage, Fuhrman grade/The International Society of Urological Pathology grade, lymphovascular invasion, and peri-renal fat invasion. Taken together, these findings indicate that DICER1, DROSHA, DGCR8 and AGO2 are significantly dysregulated in ccRCC, suggesting that they are important in the pathophysiology of this malignancy. Impairment of microRNA (miRNA) biogenesis may be involved in clear cell renal cell carcinoma (ccRCC). The objective of the present study was to investigate the mRNA levels of important miRNA machinery components, D1CER1, DROSHA, DiGeroge syndrome critical region gene 8 (DGCR8), and Argonaute 2 (AGO2), and their correlations with clinicopathological characteristics of ccRCC using mRNA expression data from The Cancer Genome Atlas kidney clear cell carcinoma (TCGA KIRC) cohort and a Korean ccRCC cohort. mRNA levels of D1CER1, DROSHA, and DGCR8 were significantly decreased in both cohorts. However, AGO2 was significantly downregulated only in the Korean ccRCC cohort. Additionally, positive correlations were observed between the altered mRNA levels of D1CER1 and DROSHA as well as DROSHA and DGCR8 in both cohorts. In the TCGA KIRC cohort, alterations in the mRNA levels of DICER1 were significantly correlated with histological grade. Furthermore, the altered mRNA levels of DGCR8 showed significant associations with sex and histologic grades. However, in the Korean ccRCC cohort, no factors were significantly associated with any clinicopathological parameters, including sex, age, T stage, Fuhrman grade/The International Society of Urological Pathology grade, lymphovascular invasion, and peri-renal fat invasion. Taken together, these findings indicate that DICER1, DROSHA, DGCR8 and AGO2 are significantly dysregulated in ccRCC, suggesting that they are important in the pathophysiology of this malignancy. Impairment of microRNA (miRNA) biogenesis may be involved in clear cell renal cell carcinoma (ccRCC). The objective of the present study was to investigate the mRNA levels of important miRNA machinery components, DICER1, DROSHA , DiGeroge syndrome critical region gene 8 ( DGCR8 ), and Argonaute 2 ( AGO2 ), and their correlations with clinicopathological characteristics of ccRCC using mRNA expression data from The Cancer Genome Atlas kidney clear cell carcinoma (TCGA KIRC) cohort and a Korean ccRCC cohort. mRNA levels of DICER1, DROSHA , and DGCR8 were significantly decreased in both cohorts. However, AGO2 was significantly downregulated only in the Korean ccRCC cohort. Additionally, positive correlations were observed between the altered mRNA levels of DICER1 and DROSHA as well as DROSHA and DGCR8 in both cohorts. In the TCGA KIRC cohort, alterations in the mRNA levels of DICER1 were significantly correlated with histological grade. Furthermore, the altered mRNA levels of DGCR8 showed significant associations with sex and histologic grades. However, in the Korean ccRCC cohort, no factors were significantly associated with any clinicopathological parameters, including sex, age, T stage, Fuhrman grade/The International Society of Urological Pathology grade, lymphovascular invasion, and peri-renal fat invasion. Taken together, these findings indicate that DICER1, DROSHA, DGCR8 and AGO2 are significantly dysregulated in ccRCC, suggesting that they are important in the pathophysiology of this malignancy. |
Audience | Academic |
Author | Lee, Sang Su Choi, Mi Sun Kim, Shin Min, Hyeonji Kim, Byung Hoon Ha, Ji Yong |
AuthorAffiliation | 2 Department of Immunology, School of Medicine, Keimyung University, Dalseo-gu, Daegu 42601, Republic of Korea 1 Department of Internal Medicine, Dongsan Medical Center, Keimyung University, Jung-gu, Daegu 41931, Republic of Korea 3 Department of Urology, Dongsan Medical Center, Keimyung University, Jung-gu, Daegu 41931, Republic of Korea 4 Department of Pathology, School of Medicine, Keimyung University, Dalseo-gu, Daegu 42601, Republic of Korea |
AuthorAffiliation_xml | – name: 1 Department of Internal Medicine, Dongsan Medical Center, Keimyung University, Jung-gu, Daegu 41931, Republic of Korea – name: 3 Department of Urology, Dongsan Medical Center, Keimyung University, Jung-gu, Daegu 41931, Republic of Korea – name: 4 Department of Pathology, School of Medicine, Keimyung University, Dalseo-gu, Daegu 42601, Republic of Korea – name: 2 Department of Immunology, School of Medicine, Keimyung University, Dalseo-gu, Daegu 42601, Republic of Korea |
Author_xml | – sequence: 1 givenname: Sang Su surname: Lee fullname: Lee, Sang Su organization: Department of Internal Medicine, Dongsan Medical Center, Keimyung University, Jung-gu, Daegu 41931, Republic of Korea – sequence: 2 givenname: Hyeonji surname: Min fullname: Min, Hyeonji organization: Department of Immunology, School of Medicine, Keimyung University, Dalseo-gu, Daegu 42601, Republic of Korea – sequence: 3 givenname: Ji Yong surname: Ha fullname: Ha, Ji Yong organization: Department of Urology, Dongsan Medical Center, Keimyung University, Jung-gu, Daegu 41931, Republic of Korea – sequence: 4 givenname: Byung Hoon surname: Kim fullname: Kim, Byung Hoon organization: Department of Urology, Dongsan Medical Center, Keimyung University, Jung-gu, Daegu 41931, Republic of Korea – sequence: 5 givenname: Mi Sun surname: Choi fullname: Choi, Mi Sun organization: Department of Pathology, School of Medicine, Keimyung University, Dalseo-gu, Daegu 42601, Republic of Korea – sequence: 6 givenname: Shin surname: Kim fullname: Kim, Shin organization: Department of Immunology, School of Medicine, Keimyung University, Dalseo-gu, Daegu 42601, Republic of Korea |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/31516620$$D View this record in MEDLINE/PubMed |
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CitedBy_id | crossref_primary_10_3390_genes13071281 crossref_primary_10_3390_cancers13040788 crossref_primary_10_3389_fonc_2020_581007 crossref_primary_10_1016_j_biopha_2022_112735 crossref_primary_10_1155_2022_5932512 crossref_primary_10_3390_ijms23105838 |
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key20200714091745_b6-ol-0-0-10759 article-title: When cellular networks run out of control: Global dysregulation of the RNAi machinery in human pathology and therapy publication-title: Prog Mol Biol Transl Sci doi: 10.1016/B978-0-12-415795-8.00006-4 contributor: fullname: Mockenhaupt |
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Snippet | Impairment of microRNA (miRNA) biogenesis may be involved in clear cell renal cell carcinoma (ccRCC). The objective of the present study was to investigate the... |
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SubjectTerms | Biosynthesis Cancer Cancer genetics Carcinoma Cluster analysis Colorectal cancer Datasets Gene expression Genes Genetic aspects Genomes Genomics Kidney cancer Messenger RNA Metastasis MicroRNA MicroRNAs Oncology Professional associations Renal cell carcinoma RNA Statistical analysis Surgery |
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Title | Dysregulation of the miRNA biogenesis components DICER1, DROSHA, DGCR8 and AGO2 in clear cell renal cell carcinoma in both a Korean cohort and the cancer genome atlas kidney clear cell carcinoma cohort |
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