Comparative analysis of the fecal microbiota from different species of domesticated and wild suids

Most of the microorganisms living in a symbiotic relationship in different animal body sites (microbiota) reside in the gastrointestinal tract (GIT). Several studies have shown that the microbiota is involved in host susceptibilities to pathogens. The fecal microbiota of domestic and wild suids was...

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Published inScientific reports Vol. 9; no. 1; pp. 13616 - 15
Main Authors Correa-Fiz, Florencia, Blanco-Fuertes, Miguel, Navas, Maria J., Lacasta, Anna, Bishop, Richard P., Githaka, Naftaly, Onzere, Cynthia, Le Potier, Marie-Frédérique, Almagro-Delgado, Vanessa, Martinez, Jorge, Aragon, Virginia, Rodriguez, Fernando
Format Journal Article
LanguageEnglish
Published London Nature Publishing Group UK 20.09.2019
Nature Publishing Group
Subjects
45/22
45/23
631/114
631/326/2565
African swine fever
African Swine Fever - genetics
African Swine Fever - microbiology
African Swine Fever Virus - genetics
African Swine Fever Virus - pathogenicity
Animals
Animals, Wild - genetics
Animals, Wild - microbiology
Comparative analysis
Disease Susceptibility
Fecal microflora
Feces
Feces - microbiology
Gastrointestinal Tract
Hogs
Humanities and Social Sciences
Kenya
Microbiota
Microbiota - genetics
multidisciplinary
Pathogens
Phacochoerus
Science
Science (multidisciplinary)
Sus scrofa
Sus scrofa - genetics
Sus scrofa - microbiology
Swine - genetics
Swine - microbiology
Kenya
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Abstract Most of the microorganisms living in a symbiotic relationship in different animal body sites (microbiota) reside in the gastrointestinal tract (GIT). Several studies have shown that the microbiota is involved in host susceptibilities to pathogens. The fecal microbiota of domestic and wild suids was analyzed. Bacterial communities were determined from feces obtained from domestic pigs ( Sus scrofa ) raised under different conditions: specific-pathogen-free (SPF) pigs and domestic pigs from the same bred, and indigenous domestic pigs from a backyard farm in Kenya. Secondly, the fecal microbiota composition of the African swine fever (ASF) resistant warthogs ( Phacochoerus africanus ) from Africa and a European zoo was determined. African swine fever (ASF) is a devastating disease for domestic pigs. African animals showed the highest microbial diversity while the SPF pigs the lowest. Analysis of the core microbiota from warthogs (resistant to ASF) and pigs (susceptible to ASF) showed 45 shared OTUs, while 6 OTUs were exclusively present in resistant animals. These six OTUs were members of the Moraxellaceae family, Pseudomonadales order and Paludibacter , Anaeroplasma , Petrimonas , and Moraxella genera. Further characterization of these microbial communities should be performed to determine the potential involvement in ASF resistance.
AbstractList Most of the microorganisms living in a symbiotic relationship in different animal body sites (microbiota) reside in the gastrointestinal tract (GIT). Several studies have shown that the microbiota is involved in host susceptibilities to pathogens. The fecal microbiota of domestic and wild suids was analyzed. Bacterial communities were determined from feces obtained from domestic pigs ( Sus scrofa ) raised under different conditions: specific-pathogen-free (SPF) pigs and domestic pigs from the same bred, and indigenous domestic pigs from a backyard farm in Kenya. Secondly, the fecal microbiota composition of the African swine fever (ASF) resistant warthogs ( Phacochoerus africanus ) from Africa and a European zoo was determined. African swine fever (ASF) is a devastating disease for domestic pigs. African animals showed the highest microbial diversity while the SPF pigs the lowest. Analysis of the core microbiota from warthogs (resistant to ASF) and pigs (susceptible to ASF) showed 45 shared OTUs, while 6 OTUs were exclusively present in resistant animals. These six OTUs were members of the Moraxellaceae family, Pseudomonadales order and Paludibacter , Anaeroplasma , Petrimonas , and Moraxella genera. Further characterization of these microbial communities should be performed to determine the potential involvement in ASF resistance.
Most of the microorganisms living in a symbiotic relationship in different animal body sites (microbiota) reside in the gastrointestinal tract (GIT). Several studies have shown that the microbiota is involved in host susceptibilities to pathogens. The fecal microbiota of domestic and wild suids was analyzed. Bacterial communities were determined from feces obtained from domestic pigs (Sus scrofa) raised under different conditions: specific-pathogen-free (SPF) pigs and domestic pigs from the same bred, and indigenous domestic pigs from a backyard farm in Kenya. Secondly, the fecal microbiota composition of the African swine fever (ASF) resistant warthogs (Phacochoerus africanus) from Africa and a European zoo was determined. African swine fever (ASF) is a devastating disease for domestic pigs. African animals showed the highest microbial diversity while the SPF pigs the lowest. Analysis of the core microbiota from warthogs (resistant to ASF) and pigs (susceptible to ASF) showed 45 shared OTUs, while 6 OTUs were exclusively present in resistant animals. These six OTUs were members of the Moraxellaceae family, Pseudomonadales order and Paludibacter, Anaeroplasma, Petrimonas, and Moraxella genera. Further characterization of these microbial communities should be performed to determine the potential involvement in ASF resistance.
Abstract Most of the microorganisms living in a symbiotic relationship in different animal body sites (microbiota) reside in the gastrointestinal tract (GIT). Several studies have shown that the microbiota is involved in host susceptibilities to pathogens. The fecal microbiota of domestic and wild suids was analyzed. Bacterial communities were determined from feces obtained from domestic pigs ( Sus scrofa ) raised under different conditions: specific-pathogen-free (SPF) pigs and domestic pigs from the same bred, and indigenous domestic pigs from a backyard farm in Kenya. Secondly, the fecal microbiota composition of the African swine fever (ASF) resistant warthogs ( Phacochoerus africanus ) from Africa and a European zoo was determined. African swine fever (ASF) is a devastating disease for domestic pigs. African animals showed the highest microbial diversity while the SPF pigs the lowest. Analysis of the core microbiota from warthogs (resistant to ASF) and pigs (susceptible to ASF) showed 45 shared OTUs, while 6 OTUs were exclusively present in resistant animals. These six OTUs were members of the Moraxellaceae family, Pseudomonadales order and Paludibacter , Anaeroplasma , Petrimonas , and Moraxella genera. Further characterization of these microbial communities should be performed to determine the potential involvement in ASF resistance.
ArticleNumber 13616
Author Onzere, Cynthia
Correa-Fiz, Florencia
Navas, Maria J.
Bishop, Richard P.
Lacasta, Anna
Le Potier, Marie-Frédérique
Rodriguez, Fernando
Githaka, Naftaly
Almagro-Delgado, Vanessa
Martinez, Jorge
Blanco-Fuertes, Miguel
Aragon, Virginia
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SSID ssj0000529419
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Snippet Most of the microorganisms living in a symbiotic relationship in different animal body sites (microbiota) reside in the gastrointestinal tract (GIT). Several...
Abstract Most of the microorganisms living in a symbiotic relationship in different animal body sites (microbiota) reside in the gastrointestinal tract (GIT)....
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proquest
crossref
pubmed
springer
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StartPage 13616
SubjectTerms 45/22
45/23
631/114
631/326/2565
African swine fever
African Swine Fever - genetics
African Swine Fever - microbiology
African Swine Fever Virus - genetics
African Swine Fever Virus - pathogenicity
Animals
Animals, Wild - genetics
Animals, Wild - microbiology
Comparative analysis
Disease Susceptibility
Fecal microflora
Feces
Feces - microbiology
Gastrointestinal Tract
Hogs
Humanities and Social Sciences
Kenya
Microbiota
Microbiota - genetics
multidisciplinary
Pathogens
Phacochoerus
Science
Science (multidisciplinary)
Sus scrofa
Sus scrofa - genetics
Sus scrofa - microbiology
Swine - genetics
Swine - microbiology
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Title Comparative analysis of the fecal microbiota from different species of domesticated and wild suids
URI https://link.springer.com/article/10.1038/s41598-019-49897-1
https://www.ncbi.nlm.nih.gov/pubmed/31541124
https://www.proquest.com/docview/2294471409
https://search.proquest.com/docview/2295485137
https://pubmed.ncbi.nlm.nih.gov/PMC6754420
Volume 9
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