Identification of KasA as the cellular target of an anti-tubercular scaffold
Phenotypic screens for bactericidal compounds are starting to yield promising hits against tuberculosis. In this regard, whole-genome sequencing of spontaneous resistant mutants generated against an indazole sulfonamide (GSK3011724A) identifies several specific single-nucleotide polymorphisms in the...
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Published in | Nature communications Vol. 7; no. 1; p. 12581 |
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Main Authors | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
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Nature Publishing Group UK
01.09.2016
Nature Publishing Group Nature Portfolio |
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Abstract | Phenotypic screens for bactericidal compounds are starting to yield promising hits against tuberculosis. In this regard, whole-genome sequencing of spontaneous resistant mutants generated against an indazole sulfonamide (GSK3011724A) identifies several specific single-nucleotide polymorphisms in the essential
Mycobacterium tuberculosis
β-ketoacyl synthase (
kas
) A gene. Here, this genomic-based target assignment is confirmed by biochemical assays, chemical proteomics and structural resolution of a KasA-GSK3011724A complex by X-ray crystallography. Finally,
M. tuberculosis
GSK3011724A-resistant mutants increase the
in vitro
minimum inhibitory concentration and the
in vivo
99% effective dose in mice, establishing
in vitro
and
in vivo
target engagement. Surprisingly, the lack of target engagement of the related β-ketoacyl synthases (FabH and KasB) suggests a different mode of inhibition when compared with other Kas inhibitors of fatty acid biosynthesis in bacteria. These results clearly identify KasA as the biological target of GSK3011724A and validate this enzyme for further drug discovery efforts against tuberculosis.
Screens for bactericidal compounds have resulted in promising anti-tubercular hits. Here, the authors analyse in detail the target of an indazole sulfonamide (GSK3011724A), and find that it has a different mode of inhibition compared to other Kas inhibitors of fatty acid biosynthesis in bacteria. |
---|---|
AbstractList | Abstract
Phenotypic screens for bactericidal compounds are starting to yield promising hits against tuberculosis. In this regard, whole-genome sequencing of spontaneous resistant mutants generated against an indazole sulfonamide (GSK3011724A) identifies several specific single-nucleotide polymorphisms in the essential
Mycobacterium tuberculosis
β-ketoacyl synthase (
kas
) A gene. Here, this genomic-based target assignment is confirmed by biochemical assays, chemical proteomics and structural resolution of a KasA-GSK3011724A complex by X-ray crystallography. Finally,
M. tuberculosis
GSK3011724A-resistant mutants increase the
in vitro
minimum inhibitory concentration and the
in vivo
99% effective dose in mice, establishing
in vitro
and
in vivo
target engagement. Surprisingly, the lack of target engagement of the related β-ketoacyl synthases (FabH and KasB) suggests a different mode of inhibition when compared with other Kas inhibitors of fatty acid biosynthesis in bacteria. These results clearly identify KasA as the biological target of GSK3011724A and validate this enzyme for further drug discovery efforts against tuberculosis. Phenotypic screens for bactericidal compounds are starting to yield promising hits against tuberculosis. In this regard, whole-genome sequencing of spontaneous resistant mutants generated against an indazole sulfonamide (GSK3011724A) identifies several specific single-nucleotide polymorphisms in the essential Mycobacterium tuberculosis β-ketoacyl synthase (kas) A gene. Here, this genomic-based target assignment is confirmed by biochemical assays, chemical proteomics and structural resolution of a KasA-GSK3011724A complex by X-ray crystallography. Finally, M. tuberculosis GSK3011724A-resistant mutants increase the in vitro minimum inhibitory concentration and the in vivo 99% effective dose in mice, establishing in vitro and in vivo target engagement. Surprisingly, the lack of target engagement of the related β-ketoacyl synthases (FabH and KasB) suggests a different mode of inhibition when compared with other Kas inhibitors of fatty acid biosynthesis in bacteria. These results clearly identify KasA as the biological target of GSK3011724A and validate this enzyme for further drug discovery efforts against tuberculosis. Screens for bactericidal compounds have resulted in promising anti-tubercular hits. Here, the authors analyse in detail the target of an indazole sulfonamide (GSK3011724A), and find that it has a different mode of inhibition compared to other Kas inhibitors of fatty acid biosynthesis in bacteria. Phenotypic screens for bactericidal compounds are starting to yield promising hits against tuberculosis. In this regard, whole-genome sequencing of spontaneous resistant mutants generated against an indazole sulfonamide (GSK3011724A) identifies several specific single-nucleotide polymorphisms in the essential Mycobacterium tuberculosis β-ketoacyl synthase ( kas ) A gene. Here, this genomic-based target assignment is confirmed by biochemical assays, chemical proteomics and structural resolution of a KasA-GSK3011724A complex by X-ray crystallography. Finally, M. tuberculosis GSK3011724A-resistant mutants increase the in vitro minimum inhibitory concentration and the in vivo 99% effective dose in mice, establishing in vitro and in vivo target engagement. Surprisingly, the lack of target engagement of the related β-ketoacyl synthases (FabH and KasB) suggests a different mode of inhibition when compared with other Kas inhibitors of fatty acid biosynthesis in bacteria. These results clearly identify KasA as the biological target of GSK3011724A and validate this enzyme for further drug discovery efforts against tuberculosis. Screens for bactericidal compounds have resulted in promising anti-tubercular hits. Here, the authors analyse in detail the target of an indazole sulfonamide (GSK3011724A), and find that it has a different mode of inhibition compared to other Kas inhibitors of fatty acid biosynthesis in bacteria. |
ArticleNumber | 12581 |
Author | Argyrou, Argyrides Ballell, Lluis Besra, Gurdyal S. Ghidelli-Disse, Sonja Cox, Jonathan A. G. Loman, Nicholas J. Selenski, Carolyn Bantscheff, Marcus Izquierdo, Mónica Cacho Bates, Robert H. Casanueva, Ruth Moynihan, Patrick J. Rullas, Joaquín Kremer, Laurent Abrahams, Katherine A. Shillings, Anthony Mendoza, Alfonso Neu, Margarete Drewes, Gerard Lelièvre, Joël Rebollo-López, María José Cammack, Nicholas C. Martínez-Martínez, María Santos Angulo-Barturen, Iñigo Chung, Chun-wa Barros, David Gurcha, Sudagar S. Jiménez-Navarro, Elena Axtman, Matthew Homes, Paul |
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Snippet | Phenotypic screens for bactericidal compounds are starting to yield promising hits against tuberculosis. In this regard, whole-genome sequencing of spontaneous... Abstract Phenotypic screens for bactericidal compounds are starting to yield promising hits against tuberculosis. In this regard, whole-genome sequencing of... Screens for bactericidal compounds have resulted in promising anti-tubercular hits. Here, the authors analyse in detail the target of an indazole sulfonamide... |
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SubjectTerms | 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase - antagonists & inhibitors 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase - genetics 631/154/555 631/326/22 631/45 631/535/1266 64/60 82/103 82/58 82/83 Animals Antitubercular Agents - pharmacology Bacterial Proteins - antagonists & inhibitors Bacterial Proteins - genetics Drug dosages Drug resistance Drug Resistance, Bacterial - genetics Female Humanities and Social Sciences Indazoles - pharmacology Mice Mice, Inbred C57BL Microbial Sensitivity Tests multidisciplinary Mycobacterium tuberculosis - drug effects Mycobacterium tuberculosis - genetics Optimization Pharmaceutical sciences Polymorphism, Single Nucleotide - genetics Science Science (multidisciplinary) Sulfonamides - pharmacology Tuberculosis Tuberculosis, Pulmonary - drug therapy Tuberculosis, Pulmonary - microbiology Tuberculosis, Pulmonary - prevention & control |
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Title | Identification of KasA as the cellular target of an anti-tubercular scaffold |
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