COVID-19 Analysis in Tissue Samples Acquired by Minimally Invasive Autopsy in Out-of-Hospital Deaths with Postmortem Degeneration
Minimally invasive autopsy (MIA) is an alternative to a full autopsy for the collection of tissue samples from patients’ bodies using instruments such as a biopsy needle. MIA has been conducted in many cases of coronavirus disease 2019 (COVID-19) and has contributed to the elucidation of the disease...
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Published in | Japanese Journal of Infectious Diseases Vol. 76; no. 5; pp. 302 - 309 |
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Main Authors | , , , , , , , , , , , , , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Tokyo
National Institute of Infectious Diseases
30.09.2023
Japan Science and Technology Agency |
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Abstract | Minimally invasive autopsy (MIA) is an alternative to a full autopsy for the collection of tissue samples from patients’ bodies using instruments such as a biopsy needle. MIA has been conducted in many cases of coronavirus disease 2019 (COVID-19) and has contributed to the elucidation of the disease pathogenesis. However, most cases analyzed are hospital deaths, and there are few reports on the application of MIA in out-of-hospital deaths with varying extents of post-mortem changes. In this study, MIA and autopsies were performed in 15 patients with COVID-19 2–30 days after death, including 11 out-of-hospital deaths. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genome detection by reverse transcriptase quantitative polymerase chain reaction using MIA samples was mostly consistent with autopsy samples, particularly lung tissue, even in out-of-hospital cases. MIA had high sensitivity and specificity (> 0.80). Histological examination of lung tissue obtained by MIA showed characteristics of COVID-19 pneumonia, with 91% agreement with autopsy samples, whereas localization of SARS-CoV-2 protein in lung tissue was indicated by immunohistochemistry, with 75% agreement. In conclusion, these results suggest that MIA is applicable to out-of-hospital deaths due to COVID-19 with various postmortem changes, especially when autopsies are not available. |
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AbstractList | Minimally invasive autopsy (MIA) is an alternative to a full autopsy for the collection of tissue samples from patients' bodies using instruments such as a biopsy needle. MIA has been conducted in many cases of coronavirus disease 2019 (COVID-19) and has contributed to the elucidation of the disease pathogenesis. However, most cases analyzed are hospital deaths, and there are few reports on the application of MIA in out-of-hospital deaths with varying extents of post-mortem changes. In this study, MIA and autopsies were performed in 15 patients with COVID-19 2-30 days after death, including 11 out-of-hospital deaths. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genome detection by reverse transcriptase quantitative polymerase chain reaction using MIA samples was mostly consistent with autopsy samples, particularly lung tissue, even in out-of-hospital cases. MIA had high sensitivity and specificity (> 0.80). Histological examination of lung tissue obtained by MIA showed characteristics of COVID-19 pneumonia, with 91% agreement with autopsy samples, whereas localization of SARS-CoV-2 protein in lung tissue was indicated by immunohistochemistry, with 75% agreement. In conclusion, these results suggest that MIA is applicable to out-of-hospital deaths due to COVID-19 with various postmortem changes, especially when autopsies are not available.Minimally invasive autopsy (MIA) is an alternative to a full autopsy for the collection of tissue samples from patients' bodies using instruments such as a biopsy needle. MIA has been conducted in many cases of coronavirus disease 2019 (COVID-19) and has contributed to the elucidation of the disease pathogenesis. However, most cases analyzed are hospital deaths, and there are few reports on the application of MIA in out-of-hospital deaths with varying extents of post-mortem changes. In this study, MIA and autopsies were performed in 15 patients with COVID-19 2-30 days after death, including 11 out-of-hospital deaths. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genome detection by reverse transcriptase quantitative polymerase chain reaction using MIA samples was mostly consistent with autopsy samples, particularly lung tissue, even in out-of-hospital cases. MIA had high sensitivity and specificity (> 0.80). Histological examination of lung tissue obtained by MIA showed characteristics of COVID-19 pneumonia, with 91% agreement with autopsy samples, whereas localization of SARS-CoV-2 protein in lung tissue was indicated by immunohistochemistry, with 75% agreement. In conclusion, these results suggest that MIA is applicable to out-of-hospital deaths due to COVID-19 with various postmortem changes, especially when autopsies are not available. Minimally invasive autopsy (MIA) is an alternative to a full autopsy for the collection of tissue samples from patients’ bodies using instruments such as a biopsy needle. MIA has been conducted in many cases of coronavirus disease 2019 (COVID-19) and has contributed to the elucidation of the disease pathogenesis. However, most cases analyzed are hospital deaths, and there are few reports on the application of MIA in out-of-hospital deaths with varying extents of post-mortem changes. In this study, MIA and autopsies were performed in 15 patients with COVID-19 2–30 days after death, including 11 out-of-hospital deaths. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genome detection by reverse transcriptase quantitative polymerase chain reaction using MIA samples was mostly consistent with autopsy samples, particularly lung tissue, even in out-of-hospital cases. MIA had high sensitivity and specificity (> 0.80). Histological examination of lung tissue obtained by MIA showed characteristics of COVID-19 pneumonia, with 91% agreement with autopsy samples, whereas localization of SARS-CoV-2 protein in lung tissue was indicated by immunohistochemistry, with 75% agreement. In conclusion, these results suggest that MIA is applicable to out-of-hospital deaths due to COVID-19 with various postmortem changes, especially when autopsies are not available. |
ArticleNumber | JJID.2023.140 |
Author | Iwase, Hirotaro Rokutan, Hirofumi Katano, Harutaka Iida, Shun Ushiku, Tetsuo Tsuneya, Shigeki Hirata, Yuichiro Yamamoto, Isao Hasegawa, Iwao Makino, Yohsuke Hinata, Munetoshi Abe, Hiroyuki Kira, Kei Iwasaki, Akiko Yasunaga, Yoichi Suzuki, Tadaki Nagasawa, Sayaka Akitomi, Shinji Nakagawa, Kimiko Yajima, Daisuke Motomura, Ayumi Kobayashi, Susumu Ikemura, Masako Torimitsu, Suguru Saitoh, Hisako |
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References | 8. Madhi SA, Pathirana J, Baillie V, et al. An observational pilot study evaluating the utility of minimally invasive tissue sampling to determine the cause of stillbirths in South African women. Clin Infect Dis. 2019;69:S342-S350. 19. Mizutani M, Nakayama Y, Saitoh Y, et al. Pathologic and neuropathologic study of a case of COVID-19. JMA J. 2022;5:157-160. 23. Heinrich F, Meissner K, Langenwalder F, et al. Postmortem stability of SARS-CoV-2 in nasopharyngeal mucosa. Emerg Infect Dis. 2021;27:329-331. 7. Bassat Q, Castillo P, Martinez MJ, et al. Validity of a minimally invasive autopsy tool for cause of death determination in pediatric deaths in Mozambique: An observational study. PLoS Med. 2017;14:e1002317. 16. Shirato K, Nao N, Katano H, et al. Development of genetic diagnostic methods for detection for novel coronavirus 2019(nCoV-2019) in Japan. Jpn J Infect Dis. 2020;73:304-307. 2. Fitzek A, Schadler J, Dietz E, et al. Prospective postmortem evaluation of 735 consecutive SARS-CoV-2-associated death cases. Sci Rep. 2021;11:19342. 22. van der Linden A, Blokker BM, Kap M, et al. Post-mortem tissue biopsies obtained at minimally invasive autopsy: an RNA-quality analysis. PLoS One. 2014;9:e115675. 12. Nava-Santana C, Rodriguez-Armida M, Jimenez JV, et al. Clinicopathologic characteristics of severe COVID-19 patients in Mexico City: A post-mortem analysis using a minimally invasive autopsy approach. PLoS One. 2022;17:e0262783. 15. Adachi T, Chong JM, Nakajima N, et al. Clinicopathologic and immunohistochemical findings from autopsy of patient with COVID-19, Japan. Emerg Infect Dis. 2020;26:2157-2161. 24. Schaller T, Hirschbuhl K, Burkhardt K, et al. Postmortem examination of patients with COVID-19. JAMA. 2020;323:2518-2520. 18. Bosmuller H, Matter M, Fend F, et al. The pulmonary pathology of COVID-19. Virchows Arch. 2021;478:137-150. 9. Rakislova N, Marimon L, Ismail MR, et al. Minimally invasive autopsy practice in COVID-19 cases: Biosafety and findings. Pathogens. 2021;10:412. 5. Castillo P, Ussene E, Ismail MR, et al. Pathological methods applied to the investigation of causes of death in developing countries: Minimally invasive autopsy approach. PLoS One. 2015;10:e0132057. 4. Centers for Disease Control and Prevention (CDC). Postmortem Guidance. Updated Apr 4, 2022. Collection and submission of postmortem specimens from deceased persons with known or suspected COVID-19 2022. Available at <https://www.cdc.gov/coronavirus/2019-ncov/hcp/guidance-postmortem-specimens.html>. 20. Deinhardt-Emmer S, Wittschieber D, Sanft J, et al. Early postmortem mapping of SARS-CoV-2 RNA in patients with COVID-19 and the correlation with tissue damage. Elife. 2021;10:e60361. 1. Dong E, Du H, Gardner L. An interactive web-based dashboard to track COVID-19 in real time. Lancet Infect Dis. 2020;20:533-534. 10. Bassat Q, Varo R, Hurtado JC, et al. Minimally invasive tissue sampling as an alternative to complete diagnostic autopsies in the context of epidemic outbreaks and pandemics: The example of coronavirus disease 2019 (COVID-19). Clin Infect Dis. 2021;73:S472-S479. 6. Castillo P, Martinez MJ, Ussene E, et al. Validity of a minimally invasive autopsy for cause of death determination in adults in Mozambique: An observational study. PLoS Med. 2016;13:e1002171. 14. Romanova ES, Vasilyev VV, Startseva G, et al. Cause of death based on systematic post-mortem studies in patients with positive SARS-CoV-2 tissue PCR during the COVID-19 pandemic. J Intern Med. 2021;290:655-665. 3. De Cock KM, Zielinski-Gutierrez E, Lucas SB. Learning from the Dead. N Engl J Med. 2019;381:1889-1891. 17. Katano H, Kano M, Nakamura T, et al. A novel real-time PCR system for simultaneous detection of human viruses in clinical samples from patients with uncertain diagnoses. J Med Virol. 2011;83:322-330. 21. Suzuki T, Higgins PJ, Crawford DR. Control selection for RNA quantitation. Biotechniques. 2000;29:332-337. 11. Xu Z, Shi L, Wang Y, et al. Pathological findings of COVID-19 associated with acute respiratory distress syndrome. Lancet Respir Med. 2020;8:420-422. 13. D'Onofrio V, Keulen L, Vandendriessche A, et al. Studying the clinical, radiological, histological, microbiological, and immunological evolution during the different COVID-19 disease stages using minimal invasive autopsy. Sci Rep. 2022;12:1360. 11 22 12 23 13 24 14 15 16 17 18 19 1 2 3 4 5 6 7 8 9 20 10 21 |
References_xml | – reference: 3. De Cock KM, Zielinski-Gutierrez E, Lucas SB. Learning from the Dead. N Engl J Med. 2019;381:1889-1891. – reference: 12. Nava-Santana C, Rodriguez-Armida M, Jimenez JV, et al. Clinicopathologic characteristics of severe COVID-19 patients in Mexico City: A post-mortem analysis using a minimally invasive autopsy approach. PLoS One. 2022;17:e0262783. – reference: 14. Romanova ES, Vasilyev VV, Startseva G, et al. Cause of death based on systematic post-mortem studies in patients with positive SARS-CoV-2 tissue PCR during the COVID-19 pandemic. J Intern Med. 2021;290:655-665. – reference: 11. Xu Z, Shi L, Wang Y, et al. Pathological findings of COVID-19 associated with acute respiratory distress syndrome. Lancet Respir Med. 2020;8:420-422. – reference: 5. Castillo P, Ussene E, Ismail MR, et al. Pathological methods applied to the investigation of causes of death in developing countries: Minimally invasive autopsy approach. PLoS One. 2015;10:e0132057. – reference: 10. Bassat Q, Varo R, Hurtado JC, et al. Minimally invasive tissue sampling as an alternative to complete diagnostic autopsies in the context of epidemic outbreaks and pandemics: The example of coronavirus disease 2019 (COVID-19). Clin Infect Dis. 2021;73:S472-S479. – reference: 13. D'Onofrio V, Keulen L, Vandendriessche A, et al. Studying the clinical, radiological, histological, microbiological, and immunological evolution during the different COVID-19 disease stages using minimal invasive autopsy. Sci Rep. 2022;12:1360. – reference: 1. Dong E, Du H, Gardner L. An interactive web-based dashboard to track COVID-19 in real time. Lancet Infect Dis. 2020;20:533-534. – reference: 9. Rakislova N, Marimon L, Ismail MR, et al. Minimally invasive autopsy practice in COVID-19 cases: Biosafety and findings. Pathogens. 2021;10:412. – reference: 19. Mizutani M, Nakayama Y, Saitoh Y, et al. Pathologic and neuropathologic study of a case of COVID-19. JMA J. 2022;5:157-160. – reference: 4. Centers for Disease Control and Prevention (CDC). Postmortem Guidance. Updated Apr 4, 2022. Collection and submission of postmortem specimens from deceased persons with known or suspected COVID-19 2022. Available at <https://www.cdc.gov/coronavirus/2019-ncov/hcp/guidance-postmortem-specimens.html>. – reference: 18. Bosmuller H, Matter M, Fend F, et al. The pulmonary pathology of COVID-19. Virchows Arch. 2021;478:137-150. – reference: 2. Fitzek A, Schadler J, Dietz E, et al. Prospective postmortem evaluation of 735 consecutive SARS-CoV-2-associated death cases. Sci Rep. 2021;11:19342. – reference: 7. Bassat Q, Castillo P, Martinez MJ, et al. Validity of a minimally invasive autopsy tool for cause of death determination in pediatric deaths in Mozambique: An observational study. PLoS Med. 2017;14:e1002317. – reference: 17. Katano H, Kano M, Nakamura T, et al. A novel real-time PCR system for simultaneous detection of human viruses in clinical samples from patients with uncertain diagnoses. J Med Virol. 2011;83:322-330. – reference: 22. van der Linden A, Blokker BM, Kap M, et al. Post-mortem tissue biopsies obtained at minimally invasive autopsy: an RNA-quality analysis. PLoS One. 2014;9:e115675. – reference: 16. Shirato K, Nao N, Katano H, et al. Development of genetic diagnostic methods for detection for novel coronavirus 2019(nCoV-2019) in Japan. Jpn J Infect Dis. 2020;73:304-307. – reference: 24. Schaller T, Hirschbuhl K, Burkhardt K, et al. Postmortem examination of patients with COVID-19. JAMA. 2020;323:2518-2520. – reference: 15. Adachi T, Chong JM, Nakajima N, et al. Clinicopathologic and immunohistochemical findings from autopsy of patient with COVID-19, Japan. Emerg Infect Dis. 2020;26:2157-2161. – reference: 20. Deinhardt-Emmer S, Wittschieber D, Sanft J, et al. Early postmortem mapping of SARS-CoV-2 RNA in patients with COVID-19 and the correlation with tissue damage. Elife. 2021;10:e60361. – reference: 21. Suzuki T, Higgins PJ, Crawford DR. Control selection for RNA quantitation. Biotechniques. 2000;29:332-337. – reference: 23. Heinrich F, Meissner K, Langenwalder F, et al. Postmortem stability of SARS-CoV-2 in nasopharyngeal mucosa. Emerg Infect Dis. 2021;27:329-331. – reference: 6. Castillo P, Martinez MJ, Ussene E, et al. Validity of a minimally invasive autopsy for cause of death determination in adults in Mozambique: An observational study. PLoS Med. 2016;13:e1002171. – reference: 8. Madhi SA, Pathirana J, Baillie V, et al. An observational pilot study evaluating the utility of minimally invasive tissue sampling to determine the cause of stillbirths in South African women. Clin Infect Dis. 2019;69:S342-S350. – ident: 18 doi: 10.1007/s00428-021-03053-1 – ident: 20 doi: 10.7554/eLife.60361 – ident: 9 doi: 10.3390/pathogens10040412 – ident: 12 doi: 10.1371/journal.pone.0262783 – ident: 4 – ident: 15 doi: 10.3201/eid2609.201353 – ident: 23 doi: 10.3201/eid2701.203112 – ident: 8 doi: 10.1093/cid/ciz573 – ident: 16 doi: 10.7883/yoken.JJID.2020.061 – ident: 3 doi: 10.1056/NEJMp1909017 – ident: 7 doi: 10.26226/morressier.58fa1768d462b80290b50db6 – ident: 6 doi: 10.1371/journal.pmed.1002171 – ident: 1 doi: 10.1016/S1473-3099(20)30120-1 – ident: 19 doi: 10.31662/jmaj.2021-0178 – ident: 13 doi: 10.1038/s41598-022-05186-y – ident: 17 doi: 10.1002/jmv.21962 – ident: 2 doi: 10.1038/s41598-021-98499-3 – ident: 5 doi: 10.1371/journal.pone.0132057 – ident: 14 doi: 10.1111/joim.13300 – ident: 24 doi: 10.1001/jama.2020.8907 – ident: 11 doi: 10.1016/S2213-2600(20)30076-X – ident: 10 doi: 10.1093/cid/ciab760 – ident: 21 doi: 10.2144/00292rv02 – ident: 22 doi: 10.1371/journal.pone.0115675 |
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Snippet | Minimally invasive autopsy (MIA) is an alternative to a full autopsy for the collection of tissue samples from patients’ bodies using instruments such as a... Minimally invasive autopsy (MIA) is an alternative to a full autopsy for the collection of tissue samples from patients' bodies using instruments such as a... |
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SubjectTerms | Autopsies Autopsy Biopsy Coronaviruses COVID-19 Degeneration Fatalities Genomes Hospitals Immunohistochemistry Localization Lungs minimally invasive autopsy out-of-hospital death Pathogenesis Polymerase chain reaction postmortem change Respiratory diseases RNA-directed DNA polymerase Severe acute respiratory syndrome coronavirus 2 Tissues Viral diseases |
Title | COVID-19 Analysis in Tissue Samples Acquired by Minimally Invasive Autopsy in Out-of-Hospital Deaths with Postmortem Degeneration |
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ispartofPNX | Japanese Journal of Infectious Diseases, 2023/09/30, Vol.76(5), pp.302-309 |
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