Semiautomated segmentation of head and neck cancers in 18F-FDG PET scans: A just-enough-interaction approach
Purpose: The purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck 18F-FDG PET scans. Methods: A semiautomated segmentation method was developed, which transforms the segmentation problem into a graph-based opti...
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Published in | Medical physics (Lancaster) Vol. 43; no. 6; pp. 2948 - 2964 |
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Main Authors | , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
United States
American Association of Physicists in Medicine
01.06.2016
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Subjects | |
Online Access | Get full text |
ISSN | 0094-2405 2473-4209 2473-4209 |
DOI | 10.1118/1.4948679 |
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Abstract | Purpose:
The purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck 18F-FDG PET scans.
Methods:
A semiautomated segmentation method was developed, which transforms the segmentation problem into a graph-based optimization problem. For this purpose, a graph structure around a user-provided approximate lesion centerpoint is constructed and a suitable cost function is derived based on local image statistics. To handle frequently occurring situations that are ambiguous (e.g., lesions adjacent to each other versus lesion with inhomogeneous uptake), several segmentation modes are introduced that adapt the behavior of the base algorithm accordingly. In addition, the authors present approaches for the efficient interactive local and global refinement of initial segmentations that are based on the “just-enough-interaction” principle. For method validation, 60 PET/CT scans from 59 different subjects with 230 head and neck lesions were utilized. All patients had squamous cell carcinoma of the head and neck. A detailed comparison with the current clinically relevant standard manual segmentation approach was performed based on 2760 segmentations produced by three experts.
Results:
Segmentation accuracy measured by the Dice coefficient of the proposed semiautomated and standard manual segmentation approach was 0.766 and 0.764, respectively. This difference was not statistically significant (p = 0.2145). However, the intra- and interoperator standard deviations were significantly lower for the semiautomated method. In addition, the proposed method was found to be significantly faster and resulted in significantly higher intra- and interoperator segmentation agreement when compared to the manual segmentation approach.
Conclusions:
Lack of consistency in tumor definition is a critical barrier for radiation treatment targeting as well as for response assessment in clinical trials and in clinical oncology decision-making. The properties of the authors approach make it well suited for applications in image-guided radiation oncology, response assessment, or treatment outcome prediction. |
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AbstractList | Purpose:
The purpose of this work was to develop, validate, and compare a highly computer‐aided method for the segmentation of hot lesions in head and neck 18F‐FDG PET scans.
Methods:
A semiautomated segmentation method was developed, which transforms the segmentation problem into a graph‐based optimization problem. For this purpose, a graph structure around a user‐provided approximate lesion centerpoint is constructed and a suitable cost function is derived based on local image statistics. To handle frequently occurring situations that are ambiguous (e.g., lesions adjacent to each other versus lesion with inhomogeneous uptake), several segmentation modes are introduced that adapt the behavior of the base algorithm accordingly. In addition, the authors present approaches for the efficient interactive local and global refinement of initial segmentations that are based on the “just‐enough‐interaction” principle. For method validation, 60 PET/CT scans from 59 different subjects with 230 head and neck lesions were utilized. All patients had squamous cell carcinoma of the head and neck. A detailed comparison with the current clinically relevant standard manual segmentation approach was performed based on 2760 segmentations produced by three experts.
Results:
Segmentation accuracy measured by the Dice coefficient of the proposed semiautomated and standard manual segmentation approach was 0.766 and 0.764, respectively. This difference was not statistically significant (p = 0.2145). However, the intra‐ and interoperator standard deviations were significantly lower for the semiautomated method. In addition, the proposed method was found to be significantly faster and resulted in significantly higher intra‐ and interoperator segmentation agreement when compared to the manual segmentation approach.
Conclusions:
Lack of consistency in tumor definition is a critical barrier for radiation treatment targeting as well as for response assessment in clinical trials and in clinical oncology decision‐making. The properties of the authors approach make it well suited for applications in image‐guided radiation oncology, response assessment, or treatment outcome prediction. The purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck 18F-FDG PET scans.PURPOSEThe purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck 18F-FDG PET scans.A semiautomated segmentation method was developed, which transforms the segmentation problem into a graph-based optimization problem. For this purpose, a graph structure around a user-provided approximate lesion centerpoint is constructed and a suitable cost function is derived based on local image statistics. To handle frequently occurring situations that are ambiguous (e.g., lesions adjacent to each other versus lesion with inhomogeneous uptake), several segmentation modes are introduced that adapt the behavior of the base algorithm accordingly. In addition, the authors present approaches for the efficient interactive local and global refinement of initial segmentations that are based on the "just-enough-interaction" principle. For method validation, 60 PET/CT scans from 59 different subjects with 230 head and neck lesions were utilized. All patients had squamous cell carcinoma of the head and neck. A detailed comparison with the current clinically relevant standard manual segmentation approach was performed based on 2760 segmentations produced by three experts.METHODSA semiautomated segmentation method was developed, which transforms the segmentation problem into a graph-based optimization problem. For this purpose, a graph structure around a user-provided approximate lesion centerpoint is constructed and a suitable cost function is derived based on local image statistics. To handle frequently occurring situations that are ambiguous (e.g., lesions adjacent to each other versus lesion with inhomogeneous uptake), several segmentation modes are introduced that adapt the behavior of the base algorithm accordingly. In addition, the authors present approaches for the efficient interactive local and global refinement of initial segmentations that are based on the "just-enough-interaction" principle. For method validation, 60 PET/CT scans from 59 different subjects with 230 head and neck lesions were utilized. All patients had squamous cell carcinoma of the head and neck. A detailed comparison with the current clinically relevant standard manual segmentation approach was performed based on 2760 segmentations produced by three experts.Segmentation accuracy measured by the Dice coefficient of the proposed semiautomated and standard manual segmentation approach was 0.766 and 0.764, respectively. This difference was not statistically significant (p = 0.2145). However, the intra- and interoperator standard deviations were significantly lower for the semiautomated method. In addition, the proposed method was found to be significantly faster and resulted in significantly higher intra- and interoperator segmentation agreement when compared to the manual segmentation approach.RESULTSSegmentation accuracy measured by the Dice coefficient of the proposed semiautomated and standard manual segmentation approach was 0.766 and 0.764, respectively. This difference was not statistically significant (p = 0.2145). However, the intra- and interoperator standard deviations were significantly lower for the semiautomated method. In addition, the proposed method was found to be significantly faster and resulted in significantly higher intra- and interoperator segmentation agreement when compared to the manual segmentation approach.Lack of consistency in tumor definition is a critical barrier for radiation treatment targeting as well as for response assessment in clinical trials and in clinical oncology decision-making. The properties of the authors approach make it well suited for applications in image-guided radiation oncology, response assessment, or treatment outcome prediction.CONCLUSIONSLack of consistency in tumor definition is a critical barrier for radiation treatment targeting as well as for response assessment in clinical trials and in clinical oncology decision-making. The properties of the authors approach make it well suited for applications in image-guided radiation oncology, response assessment, or treatment outcome prediction. Purpose: The purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck 18F-FDG PET scans. Methods: A semiautomated segmentation method was developed, which transforms the segmentation problem into a graph-based optimization problem. For this purpose, a graph structure around a user-provided approximate lesion centerpoint is constructed and a suitable cost function is derived based on local image statistics. To handle frequently occurring situations that are ambiguous (e.g., lesions adjacent to each other versus lesion with inhomogeneous uptake), several segmentation modes are introduced that adapt the behavior of the base algorithm accordingly. In addition, the authors present approaches for the efficient interactive local and global refinement of initial segmentations that are based on the “just-enough-interaction” principle. For method validation, 60 PET/CT scans from 59 different subjects with 230 head and neck lesions were utilized. All patients had squamous cell carcinoma of the head and neck. A detailed comparison with the current clinically relevant standard manual segmentation approach was performed based on 2760 segmentations produced by three experts. Results: Segmentation accuracy measured by the Dice coefficient of the proposed semiautomated and standard manual segmentation approach was 0.766 and 0.764, respectively. This difference was not statistically significant (p = 0.2145). However, the intra- and interoperator standard deviations were significantly lower for the semiautomated method. In addition, the proposed method was found to be significantly faster and resulted in significantly higher intra- and interoperator segmentation agreement when compared to the manual segmentation approach. Conclusions: Lack of consistency in tumor definition is a critical barrier for radiation treatment targeting as well as for response assessment in clinical trials and in clinical oncology decision-making. The properties of the authors approach make it well suited for applications in image-guided radiation oncology, response assessment, or treatment outcome prediction. The purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck 18F-FDG PET scans. A semiautomated segmentation method was developed, which transforms the segmentation problem into a graph-based optimization problem. For this purpose, a graph structure around a user-provided approximate lesion centerpoint is constructed and a suitable cost function is derived based on local image statistics. To handle frequently occurring situations that are ambiguous (e.g., lesions adjacent to each other versus lesion with inhomogeneous uptake), several segmentation modes are introduced that adapt the behavior of the base algorithm accordingly. In addition, the authors present approaches for the efficient interactive local and global refinement of initial segmentations that are based on the "just-enough-interaction" principle. For method validation, 60 PET/CT scans from 59 different subjects with 230 head and neck lesions were utilized. All patients had squamous cell carcinoma of the head and neck. A detailed comparison with the current clinically relevant standard manual segmentation approach was performed based on 2760 segmentations produced by three experts. Segmentation accuracy measured by the Dice coefficient of the proposed semiautomated and standard manual segmentation approach was 0.766 and 0.764, respectively. This difference was not statistically significant (p = 0.2145). However, the intra- and interoperator standard deviations were significantly lower for the semiautomated method. In addition, the proposed method was found to be significantly faster and resulted in significantly higher intra- and interoperator segmentation agreement when compared to the manual segmentation approach. Lack of consistency in tumor definition is a critical barrier for radiation treatment targeting as well as for response assessment in clinical trials and in clinical oncology decision-making. The properties of the authors approach make it well suited for applications in image-guided radiation oncology, response assessment, or treatment outcome prediction. |
Author | Beichel, Reinhard R. Bauer, Christian Chang, Tangel Buatti, John M. Sonka, Milan Ulrich, Ethan J. Smith, Brian J. Sunderland, John J. Graham, Michael M. Van Tol, Markus Plichta, Kristin A. |
Author_xml | – sequence: 1 givenname: Reinhard R. surname: Beichel fullname: Beichel, Reinhard R. email: reinhard-beichel@uiowa.edu organization: Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, Iowa 52242; The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, Iowa 52242; and Department of Internal Medicine, The University of Iowa, Iowa City, Iowa 52242 – sequence: 2 givenname: Markus surname: Van Tol fullname: Van Tol, Markus organization: Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, Iowa 52242 and The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, Iowa 52242 – sequence: 3 givenname: Ethan J. surname: Ulrich fullname: Ulrich, Ethan J. organization: Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, Iowa 52242 and The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, Iowa 52242 – sequence: 4 givenname: Christian surname: Bauer fullname: Bauer, Christian organization: Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, Iowa 52242 and The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, Iowa 52242 – sequence: 5 givenname: Tangel surname: Chang fullname: Chang, Tangel organization: Department of Radiation Oncology, The University of Iowa, Iowa City, Iowa 52242 – sequence: 6 givenname: Kristin A. surname: Plichta fullname: Plichta, Kristin A. organization: Department of Radiation Oncology, The University of Iowa, Iowa City, Iowa 52242 – sequence: 7 givenname: Brian J. surname: Smith fullname: Smith, Brian J. organization: Department of Biostatistics, The University of Iowa, Iowa City, Iowa 52242 – sequence: 8 givenname: John J. surname: Sunderland fullname: Sunderland, John J. organization: Department of Radiology, The University of Iowa, Iowa City, Iowa 52242 – sequence: 9 givenname: Michael M. surname: Graham fullname: Graham, Michael M. organization: Department of Radiology, The University of Iowa, Iowa City, Iowa 52242 – sequence: 10 givenname: Milan surname: Sonka fullname: Sonka, Milan organization: Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, Iowa 52242; Department of Radiation Oncology, The University of Iowa, Iowa City, Iowa 52242; and The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, Iowa 52242 – sequence: 11 givenname: John M. surname: Buatti fullname: Buatti, John M. organization: Department of Radiation Oncology, The University of Iowa, Iowa City, Iowa 52242 and The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, Iowa 52242 |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/27277044$$D View this record in MEDLINE/PubMed https://www.osti.gov/biblio/22685103$$D View this record in Osti.gov |
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Copyright | American Association of Physicists in Medicine 2016 The Authors. Published by American Association of Physicists in Medicine and John Wiley & Sons Ltd. 2016 American Association of Physicists in Medicine. 2016 American Association of Physicists in Medicine |
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Keywords | just-enough-interaction principle graph-based segmentation cancer segmentation optimal surface finding FDG PET imaging |
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Notes | reinhard‐beichel@uiowa.edu Author to whom correspondence should be addressed. Electronic mail ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Author to whom correspondence should be addressed. Electronic mail: reinhard-beichel@uiowa.edu |
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Snippet | Purpose:
The purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck... Purpose: The purpose of this work was to develop, validate, and compare a highly computer‐aided method for the segmentation of hot lesions in head and neck... The purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck 18F-FDG PET... Purpose: The purpose of this work was to develop, validate, and compare a highly computer-aided method for the segmentation of hot lesions in head and neck... |
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SourceType | Open Access Repository Aggregation Database Index Database Enrichment Source Publisher |
StartPage | 2948 |
SubjectTerms | 60 APPLIED LIFE SCIENCES Biological material, e.g. blood, urine; Haemocytometers cancer cancer segmentation CLINICAL TRIALS Computed tomography Computer software COMPUTERIZED TOMOGRAPHY DECISION MAKING Digital computing or data processing equipment or methods, specially adapted for specific applications FDG PET imaging graph theory graph‐based segmentation HEAD Image analysis Image data processing or generation, in general image segmentation just‐enough‐interaction principle MANUALS Measuring half‐life of a radioactive substance medical image processing Medical image reconstruction Medical image segmentation NECK optimal surface finding optimisation POSITRON COMPUTED TOMOGRAPHY positron emission tomography Positron emission tomography (PET) QUANTITATIVE IMAGING AND IMAGE PROCESSING RADIATION PROTECTION AND DOSIMETRY Radiation therapy Radiation treatment RADIOLOGY AND NUCLEAR MEDICINE Scintigraphy Segmentation |
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Title | Semiautomated segmentation of head and neck cancers in 18F-FDG PET scans: A just-enough-interaction approach |
URI | http://dx.doi.org/10.1118/1.4948679 https://onlinelibrary.wiley.com/doi/abs/10.1118%2F1.4948679 https://www.ncbi.nlm.nih.gov/pubmed/27277044 https://www.proquest.com/docview/1795875233 https://www.osti.gov/biblio/22685103 https://pubmed.ncbi.nlm.nih.gov/PMC4874930 |
Volume | 43 |
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