Identification of genetic risk factors in the Chinese population implicates a role of immune system in Alzheimer’s disease pathogenesis
Alzheimer’s disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the APOE locus (sentinel variant rs73052335, P = 1.44 × 10−14), two common variants, GCH1 (rs7...
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Published in | Proceedings of the National Academy of Sciences - PNAS Vol. 115; no. 8; pp. 1697 - 1706 |
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Main Authors | , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
United States
National Academy of Sciences
20.02.2018
|
Series | Inaugural Article |
Subjects | |
Online Access | Get full text |
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Abstract | Alzheimer’s disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the APOE locus (sentinel variant rs73052335, P = 1.44 × 10−14), two common variants, GCH1 (rs72713460, P = 4.36 × 10−5) and KCNJ15 (rs928771, P = 3.60 × 10−6), were identified and further verified for their possible risk effects for AD in three small non-Asian AD cohorts. Genotype–phenotype analysis showed that KCNJ15 variant rs928771 affects the onset age of AD, with earlier disease onset in minor allele carriers. In addition, altered expression level of the KCNJ15 transcript can be observed in the blood of AD subjects. Moreover, the risk variants of GCH1 and KCNJ15 are associated with changes in their transcript levels in specific tissues, as well as changes of plasma biomarkers levels in AD subjects. Importantly, network analysis of hippocampus and blood transcriptome datasets suggests that the risk variants in the APOE, GCH1, and KCNJ15 loci might exert their functions through their regulatory effects on immune-related pathways. Taking these data together, we identified common variants of GCH1 and KCNJ15 in the Chinese population that contribute to AD risk. These variants may exert their functional effects through the immune system. |
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AbstractList | Alzheimer’s disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the APOE locus (sentinel variant rs73052335, P = 1.44 × 10−14), two common variants, GCH1 (rs72713460, P = 4.36 × 10−5) and KCNJ15 (rs928771, P = 3.60 × 10−6), were identified and further verified for their possible risk effects for AD in three small non-Asian AD cohorts. Genotype–phenotype analysis showed that KCNJ15 variant rs928771 affects the onset age of AD, with earlier disease onset in minor allele carriers. In addition, altered expression level of the KCNJ15 transcript can be observed in the blood of AD subjects. Moreover, the risk variants of GCH1 and KCNJ15 are associated with changes in their transcript levels in specific tissues, as well as changes of plasma biomarkers levels in AD subjects. Importantly, network analysis of hippocampus and blood transcriptome datasets suggests that the risk variants in the APOE, GCH1, and KCNJ15 loci might exert their functions through their regulatory effects on immune-related pathways. Taking these data together, we identified common variants of GCH1 and KCNJ15 in the Chinese population that contribute to AD risk. These variants may exert their functional effects through the immune system. Alzheimer’s disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the APOE locus (sentinel variant rs73052335, P = 1.44 × 10 −14 ), two common variants, GCH1 (rs72713460, P = 4.36 × 10 −5 ) and KCNJ15 (rs928771, P = 3.60 × 10 −6 ), were identified and further verified for their possible risk effects for AD in three small non-Asian AD cohorts. Genotype–phenotype analysis showed that KCNJ15 variant rs928771 affects the onset age of AD, with earlier disease onset in minor allele carriers. In addition, altered expression level of the KCNJ15 transcript can be observed in the blood of AD subjects. Moreover, the risk variants of GCH1 and KCNJ15 are associated with changes in their transcript levels in specific tissues, as well as changes of plasma biomarkers levels in AD subjects. Importantly, network analysis of hippocampus and blood transcriptome datasets suggests that the risk variants in the APOE , GCH1 , and KCNJ15 loci might exert their functions through their regulatory effects on immune-related pathways. Taking these data together, we identified common variants of GCH1 and KCNJ15 in the Chinese population that contribute to AD risk. These variants may exert their functional effects through the immune system. Alzheimer's disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the APOE locus (sentinel variant rs73052335, P = 1.44 × 10-14), two common variants, GCH1 (rs72713460, P = 4.36 × 10-5) and KCNJ15 (rs928771, P = 3.60 × 10-6), were identified and further verified for their possible risk effects for AD in three small non-Asian AD cohorts. Genotype-phenotype analysis showed that KCNJ15 variant rs928771 affects the onset age of AD, with earlier disease onset in minor allele carriers. In addition, altered expression level of the KCNJ15 transcript can be observed in the blood of AD subjects. Moreover, the risk variants of GCH1 and KCNJ15 are associated with changes in their transcript levels in specific tissues, as well as changes of plasma biomarkers levels in AD subjects. Importantly, network analysis of hippocampus and blood transcriptome datasets suggests that the risk variants in the APOE, GCH1, and KCNJ15 loci might exert their functions through their regulatory effects on immune-related pathways. Taking these data together, we identified common variants of GCH1 and KCNJ15 in the Chinese population that contribute to AD risk. These variants may exert their functional effects through the immune system.Alzheimer's disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the APOE locus (sentinel variant rs73052335, P = 1.44 × 10-14), two common variants, GCH1 (rs72713460, P = 4.36 × 10-5) and KCNJ15 (rs928771, P = 3.60 × 10-6), were identified and further verified for their possible risk effects for AD in three small non-Asian AD cohorts. Genotype-phenotype analysis showed that KCNJ15 variant rs928771 affects the onset age of AD, with earlier disease onset in minor allele carriers. In addition, altered expression level of the KCNJ15 transcript can be observed in the blood of AD subjects. Moreover, the risk variants of GCH1 and KCNJ15 are associated with changes in their transcript levels in specific tissues, as well as changes of plasma biomarkers levels in AD subjects. Importantly, network analysis of hippocampus and blood transcriptome datasets suggests that the risk variants in the APOE, GCH1, and KCNJ15 loci might exert their functions through their regulatory effects on immune-related pathways. Taking these data together, we identified common variants of GCH1 and KCNJ15 in the Chinese population that contribute to AD risk. These variants may exert their functional effects through the immune system. Alzheimer’s disease (AD) is an age-related neurodegenerative disease. Genome-wide association studies predominately focusing on Caucasian populations have identified risk loci and genes associated with AD; the majority of these variants reside in noncoding regions with unclear functions. Here, we report a whole-genome sequencing study for AD in the Chinese population. Other than the APOE locus, we identified common variants in GCH1 and KCNJ15 that show suggestive associations with AD. For these two risk variants, an association with AD or advanced onset of disease can be observed in non-Asian AD cohorts. An association study of risk variants with expression data revealed their modulatory effects on immune signatures, linking the potential roles of these genes with immune-related pathways during AD pathogenesis. Alzheimer’s disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the APOE locus (sentinel variant rs73052335, P = 1.44 × 10 −14 ), two common variants, GCH1 (rs72713460, P = 4.36 × 10 −5 ) and KCNJ15 (rs928771, P = 3.60 × 10 −6 ), were identified and further verified for their possible risk effects for AD in three small non-Asian AD cohorts. Genotype–phenotype analysis showed that KCNJ15 variant rs928771 affects the onset age of AD, with earlier disease onset in minor allele carriers. In addition, altered expression level of the KCNJ15 transcript can be observed in the blood of AD subjects. Moreover, the risk variants of GCH1 and KCNJ15 are associated with changes in their transcript levels in specific tissues, as well as changes of plasma biomarkers levels in AD subjects. Importantly, network analysis of hippocampus and blood transcriptome datasets suggests that the risk variants in the APOE , GCH1 , and KCNJ15 loci might exert their functions through their regulatory effects on immune-related pathways. Taking these data together, we identified common variants of GCH1 and KCNJ15 in the Chinese population that contribute to AD risk. These variants may exert their functional effects through the immune system. Alzheimer's disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the locus (sentinel variant rs73052335, = 1.44 × 10 ), two common variants, (rs72713460, = 4.36 × 10 ) and (rs928771, = 3.60 × 10 ), were identified and further verified for their possible risk effects for AD in three small non-Asian AD cohorts. Genotype-phenotype analysis showed that variant rs928771 affects the onset age of AD, with earlier disease onset in minor allele carriers. In addition, altered expression level of the transcript can be observed in the blood of AD subjects. Moreover, the risk variants of and are associated with changes in their transcript levels in specific tissues, as well as changes of plasma biomarkers levels in AD subjects. Importantly, network analysis of hippocampus and blood transcriptome datasets suggests that the risk variants in the , , and loci might exert their functions through their regulatory effects on immune-related pathways. Taking these data together, we identified common variants of and in the Chinese population that contribute to AD risk. These variants may exert their functional effects through the immune system. Alzheimer's disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In addition to the variants identified in or around the APOE locus (sentinel variant rs73052335, P = 1.44 x 10-14), two common variants, GCH1 (rs72713460, P = 4.36 x 10-5) and KCNJ15 (rs928771, P = 3.60 x 10 -6), were identified and further verified for their possible risk effects for AD in three small non-Asian AD cohorts. Genotype-phenotype analysis showed that KCNJ15 variant rs928771 affects the onset age of AD, with earlier disease onset in minor allele carriers. In addition, altered expression level of the KCNJ15 transcript can be observed in the blood of AD subjects. Moreover, the risk variants of GCH1 and KCNJ15 are associated with changes in their transcript levels in specific tissues, as well as changes of plasma biomarkers levels in AD subjects. Importantly, network analysis of hippocampus and blood transcriptome datasets suggests that the risk variants in the APOE, GCH1, and KCNJ15 loci might exert their functions through their regulatory effects on immune-related pathways. Taking these data together, we identified common variants of GCH1 and KCNJ15 in the Chinese population that contribute to AD risk. These variants may exert their functional effects through the immune system. |
Author | Guo, Qihao Li, Yun Ip, Nancy Y. Chen, Keliang Fu, Amy K. Y. Zhou, Xiaopu Chen, Yuewen Zhao, Qianhua Chen, Yu Mok, Kin Y. Hardy, John |
Author_xml | – sequence: 1 givenname: Xiaopu surname: Zhou fullname: Zhou, Xiaopu organization: Division of Life Science, State Key Laboratory of Molecular Neuroscience and Molecular Neuroscience Center, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, China – sequence: 2 givenname: Yu surname: Chen fullname: Chen, Yu organization: The Brain Cognition and Brain Disease Institute, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055 Guangdong, China – sequence: 3 givenname: Kin Y. surname: Mok fullname: Mok, Kin Y. organization: Division of Life Science, State Key Laboratory of Molecular Neuroscience and Molecular Neuroscience Center, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, China – sequence: 4 givenname: Qianhua surname: Zhao fullname: Zhao, Qianhua organization: Department of Neurology, Huashan Hospital, Fudan University, 200040 Shanghai, China – sequence: 5 givenname: Keliang surname: Chen fullname: Chen, Keliang organization: Department of Neurology, Huashan Hospital, Fudan University, 200040 Shanghai, China – sequence: 6 givenname: Yuewen surname: Chen fullname: Chen, Yuewen organization: The Brain Cognition and Brain Disease Institute, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055 Guangdong, China – sequence: 7 givenname: John surname: Hardy fullname: Hardy, John organization: Department of Molecular Neuroscience, University College London Institute of Neurology, London WC1N 3BG, United Kingdom – sequence: 8 givenname: Yun surname: Li fullname: Li, Yun organization: Department of Genetics, University of North Carolina, Chapel Hill, NC 27599 – sequence: 9 givenname: Amy K. Y. surname: Fu fullname: Fu, Amy K. Y. organization: Guangdong Provincial Key Laboratory of Brain Science, Disease, and Drug Development, Hong Kong University of Science and Technology Shenzhen Research Institute, Shenzhen, 518057 Guangdong, China – sequence: 10 givenname: Qihao surname: Guo fullname: Guo, Qihao organization: Department of Neurology, Huashan Hospital, Fudan University, 200040 Shanghai, China – sequence: 11 givenname: Nancy Y. surname: Ip fullname: Ip, Nancy Y. organization: Guangdong Provincial Key Laboratory of Brain Science, Disease, and Drug Development, Hong Kong University of Science and Technology Shenzhen Research Institute, Shenzhen, 518057 Guangdong, China |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/29432188$$D View this record in MEDLINE/PubMed |
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Cites_doi | 10.1016/j.ajhg.2009.12.009 10.4238/2015.September.22.12 10.1097/01.wad.0000213865.09806.92 10.1177/1533317515577128 10.1016/j.ajhg.2011.04.014 10.1007/s004150050461 10.1126/science.8346443 10.1006/geno.1997.4865 10.2337/db11-1201 10.1002/mds.22729 10.1016/j.schres.2005.11.012 10.5713/ajas.16.0348 10.1038/ng.3538 10.1056/NEJMoa1211851 10.1093/brain/awv231 10.1038/ng.2802 10.1016/S0014-5793(00)01528-3 10.1038/nn.4587 10.1002/gepi.20403 10.1182/blood-2011-12-400267 10.1016/j.jalz.2010.03.007 10.1093/bioinformatics/btu170 10.1016/j.neurobiolaging.2016.10.006 10.1016/j.ajhg.2009.01.005 10.1002/ajh.23613 10.1182/blood.V114.22.575.575 10.1093/brain/awu179 10.1101/gr.176552.114 10.1016/j.neuron.2013.02.026 10.1038/mp.2016.241 10.1126/science.1262110 10.1016/j.neuron.2013.04.014 10.1038/mp.2011.52 10.1002/jcb.21127 10.3233/JAD-140225 10.1101/gr.117259.110 10.1038/nature21374 10.4161/epi.25865 10.1016/j.ygeno.2009.01.003 10.1001/archneur.65.11.1518 10.1038/tpj.2009.69 10.1038/jhg.2011.135 10.1093/nar/gku1003 10.1093/bioinformatics/btq419 10.1016/j.neurobiolaging.2016.02.023 10.1172/JCI31093 10.1007/s12035-014-9015-z 10.1126/science.277.5327.818 10.1523/JNEUROSCI.2085-06.2006 10.1016/j.neuroimage.2010.01.042 10.1534/g3.116.029439 10.1089/bio.2015.0032 10.1101/gr.229102 10.1016/S0140-6736(13)60221-4 10.1007/s13311-014-0295-9 10.1016/j.neurobiolaging.2014.12.030 10.1002/ana.410430512 10.1111/j.1365-2796.2004.01388.x 10.1056/NEJMoa1211103 10.1016/j.amjopharm.2012.09.002 10.1038/sdata.2017.11 10.1179/1743132814Y.0000000376 10.1038/ng.3916 10.1086/521987 10.1016/j.jneuroim.2005.12.007 10.1038/jhg.2013.28 10.1016/j.jalz.2011.03.005 10.1038/ng1847 10.1016/j.cell.2015.01.049 10.1002/gepi.21611 10.1212/WNL.55.11.1735 |
ContentType | Journal Article |
Contributor | Jack, Jr, Clifford R Figurski, Michal Vemuri, Prashanthi Fleisher, Adam Yanez, Beatriz Schuff, Norbert Snyder, Peter Frank, Richard Cabrera, Yuliana Chen, Kewei Mintz, Akiva Ulysse, Anaztasia Green, Robert C Montine, Tom DeCarli, Charles Trojanowki, John Q Fox, Nick Hergesheimer, Lindsey Thal, Lean Lind, Betty Korecka, Magdalena Norbash, Alexander Walter, Sarah Porsteinsson, Anton P Fillit, Howard Jones, David Kantarci, Kejal Oliver, Angela Aisen, Paul Morris, John Sarrael, Antero Reiman, Eric M Budson, Andrew E Foster, Norm Foroud, Tatiana M Saykin, Andrew J Salazar, Jennifer Harvey, Danielle Bonakdarpour, Borna Nho, Kwangsik Mudge, Benita Potkin, Steven Donohue, Michael Ward, Chad Hsiao, John Senjem, Matt Lee, Virginia Lee, Athena Beckett, Laurel Thal, Leon Taylor-Reinwald, Lisa Ances, Beau Bernstein, Matthew Harless, Kelly Khachaturian, Zaven Burke, Anna Jagust, William Mesulam, M Marcel Smith, Amanda Lane, Barton Hake, Ann Marie Borowski, Bret Weiner, Michael Franklin, Erin Lamb, Ashley Raj, Balebail Ashok Hefti, Franz Gunter, Jeff Thompson, Paul Fa |
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Copyright | Volumes 1–89 and 106–114, copyright as a collective work only; author(s) retains copyright to individual articles Copyright © 2018 the Author(s). Published by PNAS. Copyright National Academy of Sciences Feb 20, 2018 Copyright © 2018 the Author(s). Published by PNAS. 2018 |
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DocumentTitleAlternate | New risk factors of Alzheimer’s disease in Chinese |
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Keywords | GWAS immune Alzheimer’s disease whole-genome sequencing risk variant |
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Notes | SourceType-Scholarly Journals-1 ObjectType-Feature-1 content type line 14 ObjectType-Article-1 ObjectType-Feature-2 content type line 23 This contribution is part of the special series of Inaugural Articles by members of the National Academy of Sciences elected in 2015. Contributed by Nancy Y. Ip, January 2, 2018 (sent for review September 6, 2017; reviewed by Michael P. Epstein, Alison Goate, and William Mobley) Reviewers: M.P.E., Emory University School of Medicine; A.G., Icahn School of Medicine at Mount Sinai; and W.M., University of California, San Diego. 3Part of the data used in the preparation of this article were obtained from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database (adni.loni.usc.edu/). As such, the investigators within the ADNI contributed to the design and implementation of ADNI and provided data but did not participate in the analysis or writing of this report. A complete listing of ADNI investigators can be found in the SI Appendix. 1X.Z. and Yu Chen contributed equally to this work. Author contributions: X.Z., Yu Chen, K.Y.M., A.K.Y.F., and N.Y.I. designed research; X.Z., Yu Chen, K.Y.M., Q.Z., K.C., Yuewen Chen, and Q.G. performed research; A.D.N.I. contributed new reagents/analytic tools; X.Z., Yu Chen, K.Y.M., J.H., Y.L., A.K.Y.F., and N.Y.I. analyzed data; X.Z., Yu Chen, A.K.Y.F., and N.Y.I. wrote the paper; and A.D.N.I. partial data were obtained from the ADNI database. |
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References | Carithers LJ (e_1_3_4_42_2) 2015; 13 Steinberger D (e_1_3_4_57_2) 1998; 43 Sims R (e_1_3_4_8_2) 2017; 49 Ramanan VK (e_1_3_4_20_2) 2015; 138 Fukuda H (e_1_3_4_69_2) 2013; 58 Ashwood P (e_1_3_4_76_2) 2006; 173 Wang HZ (e_1_3_4_11_2) 2016; 53 Huang M (e_1_3_4_14_2) 2015; 30 Jiang T (e_1_3_4_17_2) 2016; 42 Basham B (e_1_3_4_45_2) 1997; 14 Belfer I (e_1_3_4_61_2) 2014; 89 e_1_3_4_27_2 e_1_3_4_48_2 Yin KJ (e_1_3_4_66_2) 2006; 26 Shi WT (e_1_3_4_59_2) 2015; 14 Wang Y (e_1_3_4_6_2) 2015; 160 Karssen L (e_1_3_4_43_2) 2013; 76 Consortium GT (e_1_3_4_41_2) 2015; 348 Lee JB (e_1_3_4_72_2) 2016; 29 Guerreiro R (e_1_3_4_3_2) 2013; 368 Szklarczyk D (e_1_3_4_44_2) 2015; 43 Huang KL (e_1_3_4_7_2) 2017; 20 Zhang L (e_1_3_4_65_2) 2007; 117 Carrasquillo MM (e_1_3_4_55_2) 2012; 57 Rho SB (e_1_3_4_75_2) 2007; 101 Masliah E (e_1_3_4_77_2) 2013; 8 Chan KY (e_1_3_4_1_2) 2013; 381 Kent WJ (e_1_3_4_46_2) 2002; 12 Takei N (e_1_3_4_56_2) 2009; 93 Browning SR (e_1_3_4_29_2) 2007; 81 Helisalmi S (e_1_3_4_53_2) 1999; 246 Guo JF (e_1_3_4_12_2) 2015; 36 Bowden NA (e_1_3_4_78_2) 2006; 82 Cai N (e_1_3_4_25_2) 2017; 4 Okamoto K (e_1_3_4_68_2) 2010; 86 Huang Y (e_1_3_4_13_2) 2015; 2015 Price AL (e_1_3_4_33_2) 2006; 38 Lambert JC (e_1_3_4_35_2) 2013; 45 Roses AD (e_1_3_4_54_2) 2010; 10 Steinberger D (e_1_3_4_58_2) 2000; 55 Genin E (e_1_3_4_52_2) 2011; 16 Xiao X (e_1_3_4_18_2) 2017; 22 Petersen RC (e_1_3_4_24_2) 2004; 256 Epstein MP (e_1_3_4_50_2) 2012; 36 Sheridan JP (e_1_3_4_74_2) 1997; 277 Okamoto K (e_1_3_4_71_2) 2012; 61 Bolger AM (e_1_3_4_28_2) 2014; 30 Gilligan AM (e_1_3_4_9_2) 2012; 10 Hon CC (e_1_3_4_47_2) 2017; 543 Taylor JG (e_1_3_4_60_2) 2009; 114 Jonsson T (e_1_3_4_4_2) 2013; 368 Lee JH (e_1_3_4_38_2) 2008; 65 Corder EH (e_1_3_4_51_2) 1993; 261 Zhu Z (e_1_3_4_22_2) 2016; 48 Pruim RJ (e_1_3_4_34_2) 2010; 26 Han B (e_1_3_4_39_2) 2011; 88 Jun G (e_1_3_4_26_2) 2015; 25 Mencacci NE (e_1_3_4_64_2) 2014; 137 Shen L (e_1_3_4_21_2) 2010; 53 Griciuc A (e_1_3_4_5_2) 2013; 78 Morris JC (e_1_3_4_37_2) 2006; 20 Kang EY (e_1_3_4_40_2) 2016; 6 Guerreiro R (e_1_3_4_2_2) 2014; 11 Weiner MW (e_1_3_4_36_2) 2010; 6 Li Y (e_1_3_4_49_2) 2011; 21 Hallman DM (e_1_3_4_10_2) 1991; 49 Miyashita A (e_1_3_4_16_2) 2014; 41 Amour A (e_1_3_4_73_2) 2000; 473 Detry B (e_1_3_4_67_2) 2012; 119 McKhann GM (e_1_3_4_23_2) 2011; 7 Gosset P (e_1_3_4_70_2) 1997; 44 Webb J (e_1_3_4_63_2) 2017; 50 e_1_3_4_31_2 Cobb SA (e_1_3_4_62_2) 2009; 24 Cruchaga C (e_1_3_4_19_2) 2013; 78 Browning BL (e_1_3_4_30_2) 2009; 84 Ma J (e_1_3_4_15_2) 2014; 36 Guan W (e_1_3_4_32_2) 2009; 33 |
References_xml | – volume: 86 start-page: 54 year: 2010 ident: e_1_3_4_68_2 article-title: Identification of KCNJ15 as a susceptibility gene in Asian patients with type 2 diabetes mellitus publication-title: Am J Hum Genet doi: 10.1016/j.ajhg.2009.12.009 – volume: 14 start-page: 11185 year: 2015 ident: e_1_3_4_59_2 article-title: Han Chinese patients with dopa-responsive dystonia exhibit a low frequency of exonic deletion in the GCH1 gene publication-title: Genet Mol Res doi: 10.4238/2015.September.22.12 – volume: 20 start-page: 210 year: 2006 ident: e_1_3_4_37_2 article-title: The Uniform Data Set (UDS): Clinical and cognitive variables and descriptive data from Alzheimer disease centers publication-title: Alzheimer Dis Assoc Disord doi: 10.1097/01.wad.0000213865.09806.92 – volume: 30 start-page: 541 year: 2015 ident: e_1_3_4_14_2 article-title: Lack of genetic association between TREM2 and Alzheimer’s disease in East Asian population: A systematic review and meta-analysis publication-title: Am J Alzheimers Dis Other Demen doi: 10.1177/1533317515577128 – volume: 88 start-page: 586 year: 2011 ident: e_1_3_4_39_2 article-title: Random-effects model aimed at discovering associations in meta-analysis of genome-wide association studies publication-title: Am J Hum Genet doi: 10.1016/j.ajhg.2011.04.014 – volume: 246 start-page: 821 year: 1999 ident: e_1_3_4_53_2 article-title: Promoter polymorphism (-491A/T) in the APOE gene of Finnish Alzheimer’s disease patients and control individuals publication-title: J Neurol doi: 10.1007/s004150050461 – volume: 261 start-page: 921 year: 1993 ident: e_1_3_4_51_2 article-title: Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer’s disease in late onset families publication-title: Science doi: 10.1126/science.8346443 – volume: 44 start-page: 237 year: 1997 ident: e_1_3_4_70_2 article-title: A new inward rectifier potassium channel gene (KCNJ15) localized on chromosome 21 in the Down syndrome chromosome region 1 (DCR1) publication-title: Genomics doi: 10.1006/geno.1997.4865 – ident: e_1_3_4_48_2 – volume: 61 start-page: 1734 year: 2012 ident: e_1_3_4_71_2 article-title: Inhibition of glucose-stimulated insulin secretion by KCNJ15, a newly identified susceptibility gene for type 2 diabetes publication-title: Diabetes doi: 10.2337/db11-1201 – volume: 24 start-page: 2070 year: 2009 ident: e_1_3_4_62_2 article-title: GCH1 in early-onset Parkinson’s disease publication-title: Mov Disord doi: 10.1002/mds.22729 – volume: 82 start-page: 175 year: 2006 ident: e_1_3_4_78_2 article-title: Preliminary investigation of gene expression profiles in peripheral blood lymphocytes in schizophrenia publication-title: Schizophr Res doi: 10.1016/j.schres.2005.11.012 – volume: 29 start-page: 1675 year: 2016 ident: e_1_3_4_72_2 article-title: Association of the single nucleotide polymorphisms in RUNX1, DYRK1A, and KCNJ15 with blood related traits in pigs publication-title: Asian-Australas J Anim Sci doi: 10.5713/ajas.16.0348 – volume: 48 start-page: 481 year: 2016 ident: e_1_3_4_22_2 article-title: Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets publication-title: Nat Genet doi: 10.1038/ng.3538 – volume: 368 start-page: 117 year: 2013 ident: e_1_3_4_3_2 article-title: TREM2 variants in Alzheimer’s disease publication-title: N Engl J Med doi: 10.1056/NEJMoa1211851 – volume: 138 start-page: 3076 year: 2015 ident: e_1_3_4_20_2 article-title: GWAS of longitudinal amyloid accumulation on 18F-florbetapir PET in Alzheimer’s disease implicates microglial activation gene IL1RAP publication-title: Brain doi: 10.1093/brain/awv231 – volume: 45 start-page: 1452 year: 2013 ident: e_1_3_4_35_2 article-title: Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer's disease publication-title: Nat Genet doi: 10.1038/ng.2802 – volume: 473 start-page: 275 year: 2000 ident: e_1_3_4_73_2 article-title: The in vitro activity of ADAM-10 is inhibited by TIMP-1 and TIMP-3 publication-title: FEBS Lett doi: 10.1016/S0014-5793(00)01528-3 – volume: 20 start-page: 1052 year: 2017 ident: e_1_3_4_7_2 article-title: A common haplotype lowers PU.1 expression in myeloid cells and delays onset of Alzheimer’s disease publication-title: Nat Neurosci doi: 10.1038/nn.4587 – volume: 33 start-page: 508 year: 2009 ident: e_1_3_4_32_2 article-title: Genotype-based matching to correct for population stratification in large-scale case-control genetic association studies publication-title: Genet Epidemiol doi: 10.1002/gepi.20403 – volume: 119 start-page: 5048 year: 2012 ident: e_1_3_4_67_2 article-title: Matrix metalloproteinase-2 governs lymphatic vessel formation as an interstitial collagenase publication-title: Blood doi: 10.1182/blood-2011-12-400267 – volume: 6 start-page: 202.e7 year: 2010 ident: e_1_3_4_36_2 article-title: The Alzheimer’s disease neuroimaging initiative: Progress report and future plans publication-title: Alzheimers Dement doi: 10.1016/j.jalz.2010.03.007 – volume: 30 start-page: 2114 year: 2014 ident: e_1_3_4_28_2 article-title: Trimmomatic: A flexible trimmer for Illumina sequence data publication-title: Bioinformatics doi: 10.1093/bioinformatics/btu170 – volume: 50 start-page: 39 year: 2017 ident: e_1_3_4_63_2 article-title: Aging modifies the effect of GCH1 RS11158026 on DAT uptake and Parkinson’s disease clinical severity publication-title: Neurobiol Aging doi: 10.1016/j.neurobiolaging.2016.10.006 – volume: 84 start-page: 210 year: 2009 ident: e_1_3_4_30_2 article-title: A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals publication-title: Am J Hum Genet doi: 10.1016/j.ajhg.2009.01.005 – volume: 89 start-page: 187 year: 2014 ident: e_1_3_4_61_2 article-title: A GCH1 haplotype confers sex-specific susceptibility to pain crises and altered endothelial function in adults with sickle cell anemia publication-title: Am J Hematol doi: 10.1002/ajh.23613 – volume: 114 start-page: 575 year: 2009 ident: e_1_3_4_60_2 article-title: A GCH1 haplotype associated with susceptibility to vasoocclusive pain and impaired vascular function in sickle cell anemia publication-title: Blood doi: 10.1182/blood.V114.22.575.575 – volume: 137 start-page: 2480 year: 2014 ident: e_1_3_4_64_2 article-title: Parkinson’s disease in GTP cyclohydrolase 1 mutation carriers publication-title: Brain doi: 10.1093/brain/awu179 – volume: 25 start-page: 918 year: 2015 ident: e_1_3_4_26_2 article-title: An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data publication-title: Genome Res doi: 10.1101/gr.176552.114 – volume: 49 start-page: 338 year: 1991 ident: e_1_3_4_10_2 article-title: The apolipoprotein E polymorphism: A comparison of allele frequencies and effects in nine populations publication-title: Am J Hum Genet – volume: 78 start-page: 256 year: 2013 ident: e_1_3_4_19_2 article-title: GWAS of cerebrospinal fluid tau levels identifies risk variants for Alzheimer’s disease publication-title: Neuron doi: 10.1016/j.neuron.2013.02.026 – volume: 22 start-page: 497 year: 2017 ident: e_1_3_4_18_2 article-title: Molecular mechanisms underlying noncoding risk variations in psychiatric genetic studies publication-title: Mol Psychiatry doi: 10.1038/mp.2016.241 – volume: 348 start-page: 648 year: 2015 ident: e_1_3_4_41_2 article-title: Human genomics. The genotype-tissue expression (GTEx) pilot analysis: Multitissue gene regulation in humans publication-title: Science doi: 10.1126/science.1262110 – volume: 78 start-page: 631 year: 2013 ident: e_1_3_4_5_2 article-title: Alzheimer’s disease risk gene CD33 inhibits microglial uptake of amyloid beta publication-title: Neuron doi: 10.1016/j.neuron.2013.04.014 – volume: 16 start-page: 903 year: 2011 ident: e_1_3_4_52_2 article-title: APOE and Alzheimer disease: A major gene with semi-dominant inheritance publication-title: Mol Psychiatry doi: 10.1038/mp.2011.52 – volume: 101 start-page: 57 year: 2007 ident: e_1_3_4_75_2 article-title: TIMP-1 regulates cell proliferation by interacting with the ninth zinc finger domain of PLZF publication-title: J Cell Biochem doi: 10.1002/jcb.21127 – volume: 41 start-page: 1031 year: 2014 ident: e_1_3_4_16_2 article-title: Lack of genetic association between TREM2 and late-onset Alzheimer’s disease in a Japanese population publication-title: J Alzheimers Dis doi: 10.3233/JAD-140225 – volume: 21 start-page: 940 year: 2011 ident: e_1_3_4_49_2 article-title: Low-coverage sequencing: Implications for design of complex trait association studies publication-title: Genome Res doi: 10.1101/gr.117259.110 – volume: 543 start-page: 199 year: 2017 ident: e_1_3_4_47_2 article-title: An atlas of human long non-coding RNAs with accurate 5′ ends publication-title: Nature doi: 10.1038/nature21374 – volume: 8 start-page: 1030 year: 2013 ident: e_1_3_4_77_2 article-title: Distinctive patterns of DNA methylation associated with Parkinson disease: Identification of concordant epigenetic changes in brain and peripheral blood leukocytes publication-title: Epigenetics doi: 10.4161/epi.25865 – volume: 93 start-page: 441 year: 2009 ident: e_1_3_4_56_2 article-title: Genetic association study on in and around the APOE in late-onset Alzheimer disease in Japanese publication-title: Genomics doi: 10.1016/j.ygeno.2009.01.003 – ident: e_1_3_4_31_2 – volume: 65 start-page: 1518 year: 2008 ident: e_1_3_4_38_2 article-title: Analyses of the National Institute on Aging Late-Onset Alzheimer’s Disease family study: Implication of additional loci publication-title: Arch Neurol doi: 10.1001/archneur.65.11.1518 – volume: 10 start-page: 375 year: 2010 ident: e_1_3_4_54_2 article-title: A TOMM40 variable-length polymorphism predicts the age of late-onset Alzheimer’s disease publication-title: Pharmacogenomics J doi: 10.1038/tpj.2009.69 – volume: 57 start-page: 3 year: 2012 ident: e_1_3_4_55_2 article-title: Commentary on ‘Functional analysis of APOE locus genetic variation implicates regional enhancers in the regulation of both TOMM40 and APOE’ publication-title: J Hum Genet doi: 10.1038/jhg.2011.135 – volume: 43 start-page: D447 year: 2015 ident: e_1_3_4_44_2 article-title: STRING v10: Protein-protein interaction networks, integrated over the tree of life publication-title: Nucleic Acids Res doi: 10.1093/nar/gku1003 – volume: 26 start-page: 2336 year: 2010 ident: e_1_3_4_34_2 article-title: LocusZoom: Regional visualization of genome-wide association scan results publication-title: Bioinformatics doi: 10.1093/bioinformatics/btq419 – volume: 42 start-page: 217.e1 year: 2016 ident: e_1_3_4_17_2 article-title: A rare coding variant in TREM2 increases risk for Alzheimer’s disease in Han Chinese publication-title: Neurobiol Aging doi: 10.1016/j.neurobiolaging.2016.02.023 – volume: 117 start-page: 2658 year: 2007 ident: e_1_3_4_65_2 article-title: Discovery of common human genetic variants of GTP cyclohydrolase 1 (GCH1) governing nitric oxide, autonomic activity, and cardiovascular risk publication-title: J Clin Invest doi: 10.1172/JCI31093 – volume: 53 start-page: 379 year: 2016 ident: e_1_3_4_11_2 article-title: Validating GWAS-identified risk loci for Alzheimer’s disease in Han Chinese populations publication-title: Mol Neurobiol doi: 10.1007/s12035-014-9015-z – volume: 277 start-page: 818 year: 1997 ident: e_1_3_4_74_2 article-title: Control of TRAIL-induced apoptosis by a family of signaling and decoy receptors publication-title: Science doi: 10.1126/science.277.5327.818 – volume: 26 start-page: 10939 year: 2006 ident: e_1_3_4_66_2 article-title: Matrix metalloproteinases expressed by astrocytes mediate extracellular amyloid-beta peptide catabolism publication-title: J Neurosci doi: 10.1523/JNEUROSCI.2085-06.2006 – volume: 53 start-page: 1051 year: 2010 ident: e_1_3_4_21_2 article-title: Whole genome association study of brain-wide imaging phenotypes for identifying quantitative trait loci in MCI and AD: A study of the ADNI cohort publication-title: Neuroimage doi: 10.1016/j.neuroimage.2010.01.042 – volume: 6 start-page: 1793 year: 2016 ident: e_1_3_4_40_2 article-title: ForestPMPlot: A flexible tool for visualizing heterogeneity between studies in meta-analysis publication-title: G3 (Bethesda) doi: 10.1534/g3.116.029439 – volume: 13 start-page: 311 year: 2015 ident: e_1_3_4_42_2 article-title: A novel approach to high-quality postmortem tissue procurement: The GTEx project publication-title: Biopreserv Biobank doi: 10.1089/bio.2015.0032 – volume: 12 start-page: 996 year: 2002 ident: e_1_3_4_46_2 article-title: The human genome browser at UCSC publication-title: Genome Res doi: 10.1101/gr.229102 – volume: 381 start-page: 2016 year: 2013 ident: e_1_3_4_1_2 article-title: Epidemiology of Alzheimer’s disease and other forms of dementia in China, 1990-2010: A systematic review and analysis publication-title: Lancet doi: 10.1016/S0140-6736(13)60221-4 – volume: 11 start-page: 732 year: 2014 ident: e_1_3_4_2_2 article-title: Genetics of Alzheimer’s disease publication-title: Neurotherapeutics doi: 10.1007/s13311-014-0295-9 – volume: 36 start-page: 1765.e1 year: 2015 ident: e_1_3_4_12_2 article-title: Polygenic determinants of Parkinson’s disease in a Chinese population publication-title: Neurobiol Aging doi: 10.1016/j.neurobiolaging.2014.12.030 – volume: 43 start-page: 634 year: 1998 ident: e_1_3_4_57_2 article-title: High penetrance and pronounced variation in expressivity of GCH1 mutations in five families with dopa-responsive dystonia publication-title: Ann Neurol doi: 10.1002/ana.410430512 – volume: 256 start-page: 183 year: 2004 ident: e_1_3_4_24_2 article-title: Mild cognitive impairment as a diagnostic entity publication-title: J Intern Med doi: 10.1111/j.1365-2796.2004.01388.x – volume: 368 start-page: 107 year: 2013 ident: e_1_3_4_4_2 article-title: Variant of TREM2 associated with the risk of Alzheimer’s disease publication-title: N Engl J Med doi: 10.1056/NEJMoa1211103 – volume: 10 start-page: 303 year: 2012 ident: e_1_3_4_9_2 article-title: Racial and ethnic disparities in Alzheimer’s disease pharmacotherapy exposure: An analysis across four state Medicaid populations publication-title: Am J Geriatr Pharmacother doi: 10.1016/j.amjopharm.2012.09.002 – volume: 4 start-page: 170011 year: 2017 ident: e_1_3_4_25_2 article-title: Data descriptor: 11,670 whole-genome sequences representative of the Han Chinese population from the CONVERGE project publication-title: Sci Data doi: 10.1038/sdata.2017.11 – volume: 76 start-page: 111 year: 2013 ident: e_1_3_4_43_2 article-title: New software and developments in the GenABEL project publication-title: Hum Hered – volume: 36 start-page: 894 year: 2014 ident: e_1_3_4_15_2 article-title: Association study of TREM2 polymorphism rs75932628 with late-onset Alzheimer’s disease in Chinese Han population publication-title: Neurol Res doi: 10.1179/1743132814Y.0000000376 – volume: 49 start-page: 1373 year: 2017 ident: e_1_3_4_8_2 article-title: Rare coding variants in PLCG2, ABI3, and TREM2 implicate microglial-mediated innate immunity in Alzheimer’s disease publication-title: Nat Genet doi: 10.1038/ng.3916 – volume: 81 start-page: 1084 year: 2007 ident: e_1_3_4_29_2 article-title: Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering publication-title: Am J Hum Genet doi: 10.1086/521987 – volume: 173 start-page: 126 year: 2006 ident: e_1_3_4_76_2 article-title: Immune activation of peripheral blood and mucosal CD3+ lymphocyte cytokine profiles in children with autism and gastrointestinal symptoms publication-title: J Neuroimmunol doi: 10.1016/j.jneuroim.2005.12.007 – volume: 58 start-page: 490 year: 2013 ident: e_1_3_4_69_2 article-title: Replication study for the association of a single-nucleotide polymorphism, rs3746876, within KCNJ15, with susceptibility to type 2 diabetes in a Japanese population publication-title: J Hum Genet doi: 10.1038/jhg.2013.28 – volume: 2015 start-page: 135674 year: 2015 ident: e_1_3_4_13_2 article-title: SNCA gene, but not MAPT, influences onset age of Parkinson’s disease in Chinese and Australians publication-title: BioMed Res Int – volume: 7 start-page: 263 year: 2011 ident: e_1_3_4_23_2 article-title: The diagnosis of dementia due to Alzheimer’s disease: Recommendations from the National Institute on Aging-Alzheimer’s Association workgroups on diagnostic guidelines for Alzheimer’s disease publication-title: Alzheimers Dement doi: 10.1016/j.jalz.2011.03.005 – volume: 38 start-page: 904 year: 2006 ident: e_1_3_4_33_2 article-title: Principal components analysis corrects for stratification in genome-wide association studies publication-title: Nat Genet doi: 10.1038/ng1847 – volume: 160 start-page: 1061 year: 2015 ident: e_1_3_4_6_2 article-title: TREM2 lipid sensing sustains the microglial response in an Alzheimer’s disease model publication-title: Cell doi: 10.1016/j.cell.2015.01.049 – volume: 36 start-page: 195 year: 2012 ident: e_1_3_4_50_2 article-title: Stratification-score matching improves correction for confounding by population stratification in case-control association studies publication-title: Genet Epidemiol doi: 10.1002/gepi.21611 – volume: 55 start-page: 1735 year: 2000 ident: e_1_3_4_58_2 article-title: Dopa-responsive dystonia: Mutation analysis of GCH1 and analysis of therapeutic doses of L-dopa publication-title: Neurology doi: 10.1212/WNL.55.11.1735 – ident: e_1_3_4_27_2 – volume: 14 start-page: 14 year: 1997 ident: e_1_3_4_45_2 article-title: Graphpad prism publication-title: Biotechnol Softw J |
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Snippet | Alzheimer’s disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In... Alzheimer's disease (AD) is a leading cause of mortality among the elderly. We performed a whole-genome sequencing study of AD in the Chinese population. In... Alzheimer’s disease (AD) is an age-related neurodegenerative disease. Genome-wide association studies predominately focusing on Caucasian populations have... |
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SubjectTerms | Age of Onset Aged Aged, 80 and over Alzheimer Disease - genetics Alzheimer Disease - immunology Alzheimer Disease - pathology Alzheimer's disease Apolipoprotein E Apolipoproteins E - genetics Asian People - genetics Biological Sciences Biomarkers Blood China Cohort Studies Female Gene expression Gene sequencing Genetic Predisposition to Disease Genetics Genome-Wide Association Study Genomes Genotype Genotypes Geriatrics Humans Immune system Immune System - immunology Loci Male Middle Aged Network analysis Neurodegenerative diseases Older people Pathogenesis Phenotypes Potassium Channels, Inwardly Rectifying - genetics Potassium Channels, Inwardly Rectifying - immunology Risk Risk analysis Risk Factors Transcription |
Title | Identification of genetic risk factors in the Chinese population implicates a role of immune system in Alzheimer’s disease pathogenesis |
URI | https://www.jstor.org/stable/26507544 https://www.ncbi.nlm.nih.gov/pubmed/29432188 https://www.proquest.com/docview/2015726348 https://www.proquest.com/docview/2001915998 https://pubmed.ncbi.nlm.nih.gov/PMC5828602 |
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