An association study on the CHRNA5/A3/B4 gene cluster, smoking and psoriasis vulgaris
Genome-wide association and large cohort studies have consistently linked several single nucleotide polymorphisms (SNPs) located in the CHRNA5/A3/B4 gene cluster to smoking behaviors and nicotine dependence. Smoking is one of the well-established environmental risk factors for psoriasis and also ass...
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Published in | Archives of Dermatological Research Vol. 306; no. 10; pp. 939 - 944 |
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Main Authors | , , , , , , |
Format | Journal Article |
Language | English |
Published |
Berlin/Heidelberg
Springer Berlin Heidelberg
01.12.2014
Springer Nature B.V |
Subjects | |
Online Access | Get full text |
ISSN | 0340-3696 1432-069X 1432-069X |
DOI | 10.1007/s00403-014-1510-6 |
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Abstract | Genome-wide association and large cohort studies have consistently linked several single nucleotide polymorphisms (SNPs) located in the CHRNA5/A3/B4 gene cluster to smoking behaviors and nicotine dependence. Smoking is one of the well-established environmental risk factors for psoriasis and also associated with severity of the disease. Then we conduct the study to examine whether the genetic variations related to smoking behavior located in the CHRNA5/A3/B4 gene cluster also predict the risk of psoriasis vulgaris (PV). The investigations may help explain the mechanisms of the smoking-PV relationship. This is a hospital base case–control study including 634 subjects (329 PV patients and 305 controls), all Chinese Han population. 8 SNPs were selected based on findings from recent studies on smoking and nicotine dependence, all located in the nicotinic acetylcholine receptor subunits CHRNA5/A3/B4 gene cluster. The variants were typed by SNaPshot Multiplex Kit (Applied Biosystems Co., USA). We confirmed that smoking, alcohol consumption and higher body mass index (BMI ≥25) were risk factors for PV. However, none of the selected SNPs was associated with PV risk in the overall analysis and stratification analysis. And we found no association between the selected SNPs in CHRNA5/A3/B4 gene cluster and the clinical features of PV in case-only analysis. This exploratory study does not provide a relationship between these smoking-related SNPs in the CHRNA5/A3/B4 gene cluster and PV in Chinese Han population. |
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AbstractList | Genome-wide association and large cohort studies have consistently linked several single nucleotide polymorphisms (SNPs) located in the CHRNA5/A3/B4 gene cluster to smoking behaviors and nicotine dependence. Smoking is one of the well-established environmental risk factors for psoriasis and also associated with severity of the disease. Then we conduct the study to examine whether the genetic variations related to smoking behavior located in the CHRNA5/A3/B4 gene cluster also predict the risk of psoriasis vulgaris (PV). The investigations may help explain the mechanisms of the smoking-PV relationship. This is a hospital base case-control study including 634 subjects (329 PV patients and 305 controls), all Chinese Han population. 8 SNPs were selected based on findings from recent studies on smoking and nicotine dependence, all located in the nicotinic acetylcholine receptor subunits CHRNA5/A3/B4 gene cluster. The variants were typed by SNaPshot Multiplex Kit (Applied Biosystems Co., USA). We confirmed that smoking, alcohol consumption and higher body mass index (BMI ≥25) were risk factors for PV. However, none of the selected SNPs was associated with PV risk in the overall analysis and stratification analysis. And we found no association between the selected SNPs in CHRNA5/A3/B4 gene cluster and the clinical features of PV in case-only analysis. This exploratory study does not provide a relationship between these smoking-related SNPs in the CHRNA5/A3/B4 gene cluster and PV in Chinese Han population.Genome-wide association and large cohort studies have consistently linked several single nucleotide polymorphisms (SNPs) located in the CHRNA5/A3/B4 gene cluster to smoking behaviors and nicotine dependence. Smoking is one of the well-established environmental risk factors for psoriasis and also associated with severity of the disease. Then we conduct the study to examine whether the genetic variations related to smoking behavior located in the CHRNA5/A3/B4 gene cluster also predict the risk of psoriasis vulgaris (PV). The investigations may help explain the mechanisms of the smoking-PV relationship. This is a hospital base case-control study including 634 subjects (329 PV patients and 305 controls), all Chinese Han population. 8 SNPs were selected based on findings from recent studies on smoking and nicotine dependence, all located in the nicotinic acetylcholine receptor subunits CHRNA5/A3/B4 gene cluster. The variants were typed by SNaPshot Multiplex Kit (Applied Biosystems Co., USA). We confirmed that smoking, alcohol consumption and higher body mass index (BMI ≥25) were risk factors for PV. However, none of the selected SNPs was associated with PV risk in the overall analysis and stratification analysis. And we found no association between the selected SNPs in CHRNA5/A3/B4 gene cluster and the clinical features of PV in case-only analysis. This exploratory study does not provide a relationship between these smoking-related SNPs in the CHRNA5/A3/B4 gene cluster and PV in Chinese Han population. Genome-wide association and large cohort studies have consistently linked several single nucleotide polymorphisms (SNPs) located in the CHRNA5/A3/B4 gene cluster to smoking behaviors and nicotine dependence. Smoking is one of the well-established environmental risk factors for psoriasis and also associated with severity of the disease. Then we conduct the study to examine whether the genetic variations related to smoking behavior located in the CHRNA5/A3/B4 gene cluster also predict the risk of psoriasis vulgaris (PV). The investigations may help explain the mechanisms of the smoking-PV relationship. This is a hospital base case-control study including 634 subjects (329 PV patients and 305 controls), all Chinese Han population. 8 SNPs were selected based on findings from recent studies on smoking and nicotine dependence, all located in the nicotinic acetylcholine receptor subunits CHRNA5/A3/B4 gene cluster. The variants were typed by SNaPshot Multiplex Kit (Applied Biosystems Co., USA). We confirmed that smoking, alcohol consumption and higher body mass index (BMI >=25) were risk factors for PV. However, none of the selected SNPs was associated with PV risk in the overall analysis and stratification analysis. And we found no association between the selected SNPs in CHRNA5/A3/B4 gene cluster and the clinical features of PV in case-only analysis. This exploratory study does not provide a relationship between these smoking-related SNPs in the CHRNA5/A3/B4 gene cluster and PV in Chinese Han population.[PUBLICATION ABSTRACT] Genome-wide association and large cohort studies have consistently linked several single nucleotide polymorphisms (SNPs) located in the CHRNA5/A3/B4 gene cluster to smoking behaviors and nicotine dependence. Smoking is one of the well-established environmental risk factors for psoriasis and also associated with severity of the disease. Then we conduct the study to examine whether the genetic variations related to smoking behavior located in the CHRNA5/A3/B4 gene cluster also predict the risk of psoriasis vulgaris (PV). The investigations may help explain the mechanisms of the smoking-PV relationship. This is a hospital base case–control study including 634 subjects (329 PV patients and 305 controls), all Chinese Han population. 8 SNPs were selected based on findings from recent studies on smoking and nicotine dependence, all located in the nicotinic acetylcholine receptor subunits CHRNA5/A3/B4 gene cluster. The variants were typed by SNaPshot Multiplex Kit (Applied Biosystems Co., USA). We confirmed that smoking, alcohol consumption and higher body mass index (BMI ≥25) were risk factors for PV. However, none of the selected SNPs was associated with PV risk in the overall analysis and stratification analysis. And we found no association between the selected SNPs in CHRNA5/A3/B4 gene cluster and the clinical features of PV in case-only analysis. This exploratory study does not provide a relationship between these smoking-related SNPs in the CHRNA5/A3/B4 gene cluster and PV in Chinese Han population. |
Author | Zhu, Kun-Ju Fan, Yi-Ming Liu, Zhong Liu, Huan Zhu, Cheng-Yao Li, Shi-Jie Li, Ke-Shen |
Author_xml | – sequence: 1 givenname: Kun-Ju surname: Zhu fullname: Zhu, Kun-Ju email: zhukunju1111@163.com organization: Department of Dermatology, Affiliated Hospital of Guangdong Medical College – sequence: 2 givenname: Zhong surname: Liu fullname: Liu, Zhong organization: Department of Dermatology, Affiliated Hospital of Guangdong Medical College – sequence: 3 givenname: Huan surname: Liu fullname: Liu, Huan organization: Department of Dermatology, Affiliated Hospital of Guangdong Medical College – sequence: 4 givenname: Shi-Jie surname: Li fullname: Li, Shi-Jie organization: Department of Dermatology, Affiliated Hospital of Guangdong Medical College – sequence: 5 givenname: Cheng-Yao surname: Zhu fullname: Zhu, Cheng-Yao organization: Department of Dermatology, Affiliated Hospital of Guangdong Medical College – sequence: 6 givenname: Ke-Shen surname: Li fullname: Li, Ke-Shen email: likeshen1971@163.com organization: Guangdong Key Laboratory of Age-Related Cardiac and Cerebral Diseases, Guangdong Medical College – sequence: 7 givenname: Yi-Ming surname: Fan fullname: Fan, Yi-Ming email: ymfan1963@163.com organization: Department of Dermatology, Affiliated Hospital of Guangdong Medical College |
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CitedBy_id | crossref_primary_10_1016_j_jaad_2017_04_015 crossref_primary_10_33611_trs_2021_028 crossref_primary_10_1158_1055_9965_EPI_20_0026 |
Cites_doi | 10.1046/j.1365-2133.2000.03782.x 10.1016/j.amjmed.2007.06.020 10.1038/jid.2009.315 10.1016/S0140-6736(07)61128-3 10.1038/ng.571 10.1093/aje/kwr325 10.1111/j.1365-2133.2011.10526.x 10.1093/ntr/ntr140 10.1158/1055-9965.EPI-11-0496 10.1016/j.jaad.2004.04.012 10.1038/ng.109 10.1038/ng.572 10.1093/ntr/ntr283 10.1093/hmg/ddq268 10.1101/cshperspect.a012112 10.1158/0008-5472.CAN-09-0081 |
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Keywords | Psoriasis vulgaris CHRNA5/A3/B4 gene cluster Chinese Han population Smoking |
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SubjectTerms | Adult Alcohol Drinking - adverse effects Alcohol Drinking - ethnology Asian Continental Ancestry Group - genetics Body Mass Index Concise Communication Dermatology Female Genetic Predisposition to Disease Genome-Wide Association Study Humans Male Medicine Medicine & Public Health Middle Aged Multigene Family Nerve Tissue Proteins - genetics Phenotype Psoriasis - ethnology Psoriasis - genetics Receptors, Nicotinic - genetics Retrospective Studies Risk Factors Smoking - adverse effects Smoking - ethnology Smoking - genetics Tobacco Use Disorder - ethnology Tobacco Use Disorder - genetics Young Adult |
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Title | An association study on the CHRNA5/A3/B4 gene cluster, smoking and psoriasis vulgaris |
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