The source of the Black Death in fourteenth-century central Eurasia
The origin of the medieval Black Death pandemic ( ad 1346–1353) has been a topic of continuous investigation because of the pandemic’s extensive demographic impact and long-lasting consequences 1 , 2 . Until now, the most debated archaeological evidence potentially associated with the pandemic’s in...
Saved in:
Published in | Nature (London) Vol. 606; no. 7915; pp. 718 - 724 |
---|---|
Main Authors | , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
London
Nature Publishing Group UK
23.06.2022
Nature Publishing Group |
Subjects | |
Online Access | Get full text |
ISSN | 0028-0836 1476-4687 1476-4687 |
DOI | 10.1038/s41586-022-04800-3 |
Cover
Loading…
Abstract | The origin of the medieval Black Death pandemic (
ad
1346–1353) has been a topic of continuous investigation because of the pandemic’s extensive demographic impact and long-lasting consequences
1
,
2
. Until now, the most debated archaeological evidence potentially associated with the pandemic’s initiation derives from cemeteries located near Lake Issyk-Kul of modern-day Kyrgyzstan
1
,
3
–
9
. These sites are thought to have housed victims of a fourteenth-century epidemic as tombstone inscriptions directly dated to 1338–1339 state ‘pestilence’ as the cause of death for the buried individuals
9
. Here we report ancient DNA data from seven individuals exhumed from two of these cemeteries, Kara-Djigach and Burana. Our synthesis of archaeological, historical and ancient genomic data shows a clear involvement of the plague bacterium
Yersinia pestis
in this epidemic event. Two reconstructed ancient
Y. pestis
genomes represent a single strain and are identified as the most recent common ancestor of a major diversification commonly associated with the pandemic’s emergence, here dated to the first half of the fourteenth century. Comparisons with present-day diversity from
Y. pestis
reservoirs in the extended Tian Shan region support a local emergence of the recovered ancient strain. Through multiple lines of evidence, our data support an early fourteenth-century source of the second plague pandemic in central Eurasia. |
---|---|
AbstractList | The origin of the medieval Black Death pandemic (AD 1346-1353) has been a topic of continuous investigation because of the pandemic's extensive demographic impact and long-lasting consequences1,2. Until now, the most debated archaeological evidence potentially associated with the pandemic's initiation derives from cemeteries located near Lake Issyk-Kul of modern-day Kyrgyzstan1,3-9. These sites are thought to have housed victims of a fourteenth-century epidemic as tombstone inscriptions directly dated to 1338-1339 state 'pestilence' as the cause of death for the buried individuals9. Here we report ancient DNA data from seven individuals exhumed from two of these cemeteries, Kara-Djigach and Burana. Our synthesis of archaeological, historical and ancient genomic data shows a clear involvement of the plague bacterium Yersinia pestis in this epidemic event. Two reconstructed ancient Y. pestis genomes represent a single strain and are identified as the most recent common ancestor of a major diversification commonly associated with the pandemic's emergence, here dated to the first half of the fourteenth century. Comparisons with present-day diversity from Y. pestis reservoirs in the extended Tian Shan region support a local emergence of the recovered ancient strain. Through multiple lines of evidence, our data support an early fourteenth-century source of the second plague pandemic in central Eurasia.The origin of the medieval Black Death pandemic (AD 1346-1353) has been a topic of continuous investigation because of the pandemic's extensive demographic impact and long-lasting consequences1,2. Until now, the most debated archaeological evidence potentially associated with the pandemic's initiation derives from cemeteries located near Lake Issyk-Kul of modern-day Kyrgyzstan1,3-9. These sites are thought to have housed victims of a fourteenth-century epidemic as tombstone inscriptions directly dated to 1338-1339 state 'pestilence' as the cause of death for the buried individuals9. Here we report ancient DNA data from seven individuals exhumed from two of these cemeteries, Kara-Djigach and Burana. Our synthesis of archaeological, historical and ancient genomic data shows a clear involvement of the plague bacterium Yersinia pestis in this epidemic event. Two reconstructed ancient Y. pestis genomes represent a single strain and are identified as the most recent common ancestor of a major diversification commonly associated with the pandemic's emergence, here dated to the first half of the fourteenth century. Comparisons with present-day diversity from Y. pestis reservoirs in the extended Tian Shan region support a local emergence of the recovered ancient strain. Through multiple lines of evidence, our data support an early fourteenth-century source of the second plague pandemic in central Eurasia. The origin of the medieval Black Death pandemic (ad 1346-1353) has been a topic of continuous investigation because of the pandemic's extensive demographic impact and long-lasting consequences1,2. Until now, the most debated archaeological evidence potentially associated with the pandemic's initiation derives from cemeteries located near Lake Issyk-Kul of modern-day Kyrgyzstan1,3-9. These sites are thought to have housed victims of a fourteenth-century epidemic as tombstone inscriptions directly dated to 1338-1339 state 'pestilence' as the cause of death for the buried individuals9. Here we report ancient DNA data from seven individuals exhumed from two of these cemeteries, Kara-Djigach and Burana. Our synthesis of archaeological, historical and ancient genomic data shows a clear involvement ofthe plague bacterium Yersinia pestis in this epidemic event. Two reconstructed ancient Y. pestis genomes represent a single strain and are identified as the most recent common ancestor of a major diversification commonly associated with the pandemic's emergence, here dated to the first half of the fourteenth century. Comparisons with present-day diversity from Y. pestis reservoirs in the extended Tian Shan region support a local emergence ofthe recovered ancient strain. Through multiple lines of evidence, our data support an early fourteenth-century source ofthe second plague pandemic in central Eurasia. The origin of the medieval Black Death pandemic ( ad 1346–1353) has been a topic of continuous investigation because of the pandemic’s extensive demographic impact and long-lasting consequences 1 , 2 . Until now, the most debated archaeological evidence potentially associated with the pandemic’s initiation derives from cemeteries located near Lake Issyk-Kul of modern-day Kyrgyzstan 1 , 3 – 9 . These sites are thought to have housed victims of a fourteenth-century epidemic as tombstone inscriptions directly dated to 1338–1339 state ‘pestilence’ as the cause of death for the buried individuals 9 . Here we report ancient DNA data from seven individuals exhumed from two of these cemeteries, Kara-Djigach and Burana. Our synthesis of archaeological, historical and ancient genomic data shows a clear involvement of the plague bacterium Yersinia pestis in this epidemic event. Two reconstructed ancient Y. pestis genomes represent a single strain and are identified as the most recent common ancestor of a major diversification commonly associated with the pandemic’s emergence, here dated to the first half of the fourteenth century. Comparisons with present-day diversity from Y. pestis reservoirs in the extended Tian Shan region support a local emergence of the recovered ancient strain. Through multiple lines of evidence, our data support an early fourteenth-century source of the second plague pandemic in central Eurasia. The origin of the medieval Black Death pandemic ( ad 1346–1353) has been a topic of continuous investigation because of the pandemic’s extensive demographic impact and long-lasting consequences 1,2 . Until now, the most debated archaeological evidence potentially associated with the pandemic’s initiation derives from cemeteries located near Lake Issyk-Kul of modern-day Kyrgyzstan 1,3–9 . These sites are thought to have housed victims of a fourteenth-century epidemic as tombstone inscriptions directly dated to 1338–1339 state ‘pestilence’ as the cause of death for the buried individuals 9 . Here we report ancient DNA data from seven individuals exhumed from two of these cemeteries, Kara-Djigach and Burana. Our synthesis of archaeological, historical and ancient genomic data shows a clear involvement of the plague bacterium Yersinia pestis in this epidemic event. Two reconstructed ancient Y. pestis genomes represent a single strain and are identified as the most recent common ancestor of a major diversification commonly associated with the pandemic’s emergence, here dated to the first half of the fourteenth century. Comparisons with present-day diversity from Y. pestis reservoirs in the extended Tian Shan region support a local emergence of the recovered ancient strain. Through multiple lines of evidence, our data support an early fourteenth-century source of the second plague pandemic in central Eurasia. The origin of the medieval Black Death pandemic (AD 1346-1353) has been a topic of continuous investigation because of the pandemic's extensive demographic impact and long-lasting consequences . Until now, the most debated archaeological evidence potentially associated with the pandemic's initiation derives from cemeteries located near Lake Issyk-Kul of modern-day Kyrgyzstan . These sites are thought to have housed victims of a fourteenth-century epidemic as tombstone inscriptions directly dated to 1338-1339 state 'pestilence' as the cause of death for the buried individuals . Here we report ancient DNA data from seven individuals exhumed from two of these cemeteries, Kara-Djigach and Burana. Our synthesis of archaeological, historical and ancient genomic data shows a clear involvement of the plague bacterium Yersinia pestis in this epidemic event. Two reconstructed ancient Y. pestis genomes represent a single strain and are identified as the most recent common ancestor of a major diversification commonly associated with the pandemic's emergence, here dated to the first half of the fourteenth century. Comparisons with present-day diversity from Y. pestis reservoirs in the extended Tian Shan region support a local emergence of the recovered ancient strain. Through multiple lines of evidence, our data support an early fourteenth-century source of the second plague pandemic in central Eurasia. |
Author | Spyrou, Maria A. Khartanovich, Valeri I. Gnecchi Ruscone, Guido A. Haak, Wolfgang Slavin, Philip Kühnert, Denise Krause, Johannes Bos, Kirsten I. Borbone, Pier-Giorgio Djansugurova, Leyla Kocher, Arthur Musralina, Lyazzat Buzhilova, Alexandra |
Author_xml | – sequence: 1 givenname: Maria A. orcidid: 0000-0002-3615-3936 surname: Spyrou fullname: Spyrou, Maria A. email: maria.spyrou@ifu.uni-tuebingen.de organization: Institute for Archaeological Sciences, Eberhard Karls University of Tübingen, Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Max Planck Institute for the Science of Human History – sequence: 2 givenname: Lyazzat surname: Musralina fullname: Musralina, Lyazzat organization: Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Laboratory of Population Genetics, Institute of Genetics and Physiology, Kazakh National University by al-Farabi – sequence: 3 givenname: Guido A. orcidid: 0000-0002-6490-8101 surname: Gnecchi Ruscone fullname: Gnecchi Ruscone, Guido A. organization: Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Max Planck Institute for the Science of Human History – sequence: 4 givenname: Arthur orcidid: 0000-0002-9499-6472 surname: Kocher fullname: Kocher, Arthur organization: Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Transmission, Infection, Diversification & Evolution Group, Max Planck Institute for the Science of Human History – sequence: 5 givenname: Pier-Giorgio surname: Borbone fullname: Borbone, Pier-Giorgio organization: Department of Civilisations and Forms of Knowledge, University of Pisa – sequence: 6 givenname: Valeri I. orcidid: 0000-0002-5533-0686 surname: Khartanovich fullname: Khartanovich, Valeri I. organization: Department of Physical Anthropology, Kunstkamera, Peter the Great Museum of Anthropology and Ethnography, Russian Academy of Sciences – sequence: 7 givenname: Alexandra orcidid: 0000-0001-6398-2177 surname: Buzhilova fullname: Buzhilova, Alexandra organization: Research Institute and Museum of Anthropology, Lomonosov Moscow State University – sequence: 8 givenname: Leyla orcidid: 0000-0002-6745-9903 surname: Djansugurova fullname: Djansugurova, Leyla organization: Laboratory of Population Genetics, Institute of Genetics and Physiology – sequence: 9 givenname: Kirsten I. orcidid: 0000-0003-2937-3006 surname: Bos fullname: Bos, Kirsten I. organization: Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Max Planck Institute for the Science of Human History – sequence: 10 givenname: Denise orcidid: 0000-0002-5657-018X surname: Kühnert fullname: Kühnert, Denise organization: Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Transmission, Infection, Diversification & Evolution Group, Max Planck Institute for the Science of Human History, European Virus Bioinformatics Center (EVBC) – sequence: 11 givenname: Wolfgang orcidid: 0000-0003-2475-2007 surname: Haak fullname: Haak, Wolfgang organization: Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Max Planck Institute for the Science of Human History – sequence: 12 givenname: Philip orcidid: 0000-0002-6460-145X surname: Slavin fullname: Slavin, Philip email: philip.slavin@stir.ac.uk organization: Division of History, Heritage and Politics, University of Stirling – sequence: 13 givenname: Johannes orcidid: 0000-0001-9144-3920 surname: Krause fullname: Krause, Johannes email: krause@eva.mpg.de organization: Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Max Planck Institute for the Science of Human History |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/35705810$$D View this record in MEDLINE/PubMed https://hal.science/hal-04917729$$DView record in HAL |
BookMark | eNp9UU1v1DAUtFAR3Rb-AAcUiQs9mD5_xfYFqSylRVqpl3K2vF67cckmxU4q9d_jNEspe6gPfrLfzJvRmyN00PWdR-g9gc8EmDrNnAhVY6AUA1cAmL1CC8JljXmt5AFaAFCFQbH6EB3lfAsAgkj-Bh0yIUEoAgu0vG58lfsxOV_1oRrK62tr3a_qm7dDU8WuCqU5eN8NDXblHtNDNdVk2-p8TDZH-xa9DrbN_t2uHqOf38-vl5d4dXXxY3m2wk6AGjB1wEgQlK61DhsqLXDtBA1KSBck00EFp6m2zsK6HL7RGyVraTlXVgRN2DH6Ms-9G9dbv9m5MHcpbm16ML2N5v9OFxtz098bTYmUXJcBJ_OAZo92ebYy019xVJBU309in3Ziqf89-jyYbczOt63tfD9mQ2sphaTFYYF-3IPelp11ZRUFpaBmIDUvqA_P3T_p_82iAOgMcKnPOfnwBCFgpsDNHLgpgZvHwA0rJLVHcnGwQ-ynDcT2ZSqbqbnodDc-_bP9AusPuXm91g |
CitedBy_id | crossref_primary_10_3390_microorganisms12010146 crossref_primary_10_1098_rspb_2024_0724 crossref_primary_10_15688_jvolsu4_2024_6_7 crossref_primary_10_1016_j_mib_2022_102256 crossref_primary_10_1080_0268117X_2025_2465959 crossref_primary_10_1136_pmj_2022_142202 crossref_primary_10_1097_NMD_0000000000001668 crossref_primary_10_1086_721976 crossref_primary_10_1086_723955 crossref_primary_10_1099_mgen_0_001149 crossref_primary_10_1038_s41598_024_56096_0 crossref_primary_10_1038_s41597_024_03031_7 crossref_primary_10_4000_sociologies_22118 crossref_primary_10_1016_j_jconrel_2025_01_069 crossref_primary_10_1016_j_mehy_2023_111153 crossref_primary_10_1016_j_scitotenv_2022_159327 crossref_primary_10_3390_genes14020479 crossref_primary_10_1038_s41598_023_48104_6 crossref_primary_10_15212_ZOONOSES_2022_0040 crossref_primary_10_1038_s42003_022_04394_6 crossref_primary_10_21055_0370_1069_2023_4_50_61 crossref_primary_10_5209_dmae_83788 crossref_primary_10_1038_d41586_022_01673_4 crossref_primary_10_1038_s41579_022_00769_y crossref_primary_10_1038_d41586_023_02154_y crossref_primary_10_1073_pnas_2209816119 crossref_primary_10_18601_01245996_v27n52_14 crossref_primary_10_3390_epidemiologia3040034 crossref_primary_10_1016_j_tube_2023_102401 crossref_primary_10_1093_socrel_srac038 crossref_primary_10_1016_j_tim_2024_10_008 crossref_primary_10_1029_2023GH000853 crossref_primary_10_1073_pnas_2209476119 crossref_primary_10_21055_0370_1069_2022_4_14_22 crossref_primary_10_1016_j_jphotochem_2025_116287 crossref_primary_10_1360_TB_2022_1095 crossref_primary_10_1016_j_geoderma_2024_116774 crossref_primary_10_3390_microorganisms12091802 crossref_primary_10_1093_ve_vead087 crossref_primary_10_1126_science_adf5300 crossref_primary_10_1016_j_cej_2023_141327 crossref_primary_10_2174_0118715265318459240721195503 crossref_primary_10_1007_s12520_022_01670_8 crossref_primary_10_1111_1751_7915_14269 crossref_primary_10_1002_ajpa_25009 crossref_primary_10_21055_0370_1069_2023_2_13_28 crossref_primary_10_3390_pathogens13121067 crossref_primary_10_1371_journal_ppat_1011404 crossref_primary_10_1215_15476715_10329778 crossref_primary_10_1038_s41597_024_03563_y crossref_primary_10_21055_0370_1069_2022_4_7_13 crossref_primary_10_1016_j_eng_2023_05_003 crossref_primary_10_1016_j_isci_2023_106787 crossref_primary_10_25207_1608_6228_2024_31_5_112_123 crossref_primary_10_1038_d41586_022_02246_1 crossref_primary_10_1007_s11426_023_1825_7 crossref_primary_10_1016_j_hlife_2024_06_006 crossref_primary_10_1007_s00203_024_04140_y crossref_primary_10_1017_mdh_2023_38 |
Cites_doi | 10.1073/pnas.1207965110 10.1038/ng.705 10.1080/01621459.1995.10476572 10.1038/ng.806 10.1186/s13059-020-02112-1 10.1017/mdh.2021.3 10.1038/srep43467 10.1038/nature10549 10.3389/fmicb.2018.01106 10.1073/pnas.1820447116 10.1515/9781400827817 10.1093/nar/gkr771 10.1371/journal.pcbi.1004957 10.1038/s41559-020-1106-9 10.1101/pdb.prot5448 10.1038/nature16152 10.1162/002219503322645439 10.1017/S0022050717000092 10.17504/protocols.io.baksicwe 10.2307/j.ctvjghwgp 10.1038/nature13591 10.1128/JB.186.15.5147-5152.2004 10.17302/TMG.1-1.11 10.1073/pnas.1314445110 10.1146/annurev-genom-091416-035526 10.1093/bioinformatics/btp352 10.1093/bioinformatics/btq166 10.1016/j.cub.2017.10.025 10.1093/molbev/msw170 10.1101/gr.232397.117 10.1126/science.aaw8977 10.1038/s41576-019-0119-1 10.1128/genomeA.00847-17 10.1186/s13059-016-0918-z 10.1126/science.abi5658 10.1038/s41586-018-0094-2 10.1093/molbev/msw054 10.18637/jss.v053.i09 10.1371/journal.pone.0187230 10.1086/711596 10.1038/s41467-018-04550-9 10.1017/S1361491607002031 10.1016/j.celrep.2021.109278 10.1016/S2666-5247(20)30176-2 10.1038/s41559-017-0446-6 10.1038/s41467-019-12154-0 10.1073/pnas.1412887112 10.1186/s13059-019-1903-0 10.1371/journal.pcbi.1006650 10.1073/pnas.1205750110 10.1162/jinh_a_01376 10.7554/eLife.12994 10.1093/bioinformatics/btu033 10.1111/1749-4877.12511 10.4000/afriques.2228 10.1073/pnas.1105107108 10.1093/ve/vex042 10.1098/rstb.2013.0624 10.1073/pnas.2009677117 10.1073/pnas.1715640115 10.1038/nature14317 10.1016/0006-3207(92)91201-3 10.1007/s11357-008-9053-4 10.1073/pnas.1812865115 10.1038/s41598-020-66012-x 10.1093/molbev/msaa163 10.1093/ve/vew007 10.1186/s13104-016-1900-2 10.17504/protocols.io.bmh6k39e 10.1093/molbev/msi103 10.1017/CBO9781139031110 10.1093/bioinformatics/btt193 10.1093/nar/gkv1189 10.1038/s41596-020-0338-0 10.17504/protocols.io.bqebmtan 10.1101/gr.251678.119 10.17504/protocols.io.bakticwn 10.1128/CMR.17.2.434-464.2004 10.1163/18747167-12341321 10.2307/j.ctvxhrjg8 10.4178/epih/e2015050 10.1093/ahr/rhaa511 10.1073/pnas.1221359110 10.1038/nature14558 10.1017/CBO9781139004046 10.1038/nmeth.2109 |
ContentType | Journal Article |
Copyright | The Author(s) 2022 2022. The Author(s). Copyright Nature Publishing Group Jun 23, 2022 Distributed under a Creative Commons Attribution 4.0 International License |
Copyright_xml | – notice: The Author(s) 2022 – notice: 2022. The Author(s). – notice: Copyright Nature Publishing Group Jun 23, 2022 – notice: Distributed under a Creative Commons Attribution 4.0 International License |
DBID | C6C AAYXX CITATION CGR CUY CVF ECM EIF NPM 3V. 7QG 7QL 7QP 7QR 7RV 7SN 7SS 7ST 7T5 7TG 7TK 7TM 7TO 7U9 7X2 7X7 7XB 88A 88E 88G 88I 8AF 8AO 8C1 8FD 8FE 8FG 8FH 8FI 8FJ 8FK 8G5 ABJCF ABUWG AEUYN AFKRA ARAPS ATCPS AZQEC BBNVY BEC BENPR BGLVJ BHPHI BKSAR C1K CCPQU D1I DWQXO FR3 FYUFA GHDGH GNUQQ GUQSH H94 HCIFZ K9. KB. KB0 KL. L6V LK8 M0K M0S M1P M2M M2O M2P M7N M7P M7S MBDVC NAPCQ P5Z P62 P64 PATMY PCBAR PDBOC PHGZM PHGZT PJZUB PKEHL PPXIY PQEST PQGLB PQQKQ PQUKI PSYQQ PTHSS PYCSY Q9U R05 RC3 S0X SOI 7X8 1XC VOOES 5PM |
DOI | 10.1038/s41586-022-04800-3 |
DatabaseName | Springer Nature OA Free Journals CrossRef Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed ProQuest Central (Corporate) Animal Behavior Abstracts Bacteriology Abstracts (Microbiology B) Calcium & Calcified Tissue Abstracts Chemoreception Abstracts Nursing & Allied Health Database Ecology Abstracts Entomology Abstracts (Full archive) Environment Abstracts Immunology Abstracts Meteorological & Geoastrophysical Abstracts Neurosciences Abstracts Nucleic Acids Abstracts Oncogenes and Growth Factors Abstracts Virology and AIDS Abstracts Agricultural Science Collection Health & Medical Collection ProQuest Central (purchase pre-March 2016) Biology Database (Alumni Edition) Medical Database (Alumni Edition) Psychology Database (Alumni) Science Database (Alumni Edition) STEM Database ProQuest Pharma Collection Public Health Database Technology Research Database ProQuest SciTech Collection ProQuest Technology Collection ProQuest Natural Science Collection Hospital Premium Collection Hospital Premium Collection (Alumni Edition) ProQuest Central (Alumni) (purchase pre-March 2016) Research Library (Alumni Edition) Materials Science & Engineering Collection ProQuest Central (Alumni Edition) ProQuest One Sustainability ProQuest Central UK/Ireland Advanced Technologies & Aerospace Collection Agricultural & Environmental Science Collection ProQuest Central Essentials Biological Science Collection eLibrary ProQuest Central Technology Collection Natural Science Collection Earth, Atmospheric & Aquatic Science Collection Environmental Sciences and Pollution Management ProQuest One Community College ProQuest Materials Science Collection ProQuest Central Korea Engineering Research Database Health Research Premium Collection Health Research Premium Collection (Alumni) ProQuest Central Student Research Library Prep AIDS and Cancer Research Abstracts SciTech Premium Collection ProQuest Health & Medical Complete (Alumni) Materials Science Database Nursing & Allied Health Database (Alumni Edition) Meteorological & Geoastrophysical Abstracts - Academic ProQuest Engineering Collection ProQuest Biological Science Collection Agricultural Science Database Health & Medical Collection (Alumni Edition) Medical Database Psychology Database Research Library (Proquest) Science Database Algology Mycology and Protozoology Abstracts (Microbiology C) Biological Science Database Engineering Database Research Library (Corporate) Nursing & Allied Health Premium Advanced Technologies & Aerospace Database ProQuest Advanced Technologies & Aerospace Collection Biotechnology and BioEngineering Abstracts Environmental Science Database Earth, Atmospheric & Aquatic Science Database Materials Science Collection ProQuest Central Premium ProQuest One Academic (New) ProQuest Health & Medical Research Collection ProQuest One Academic Middle East (New) ProQuest One Health & Nursing ProQuest One Academic Eastern Edition (DO NOT USE) ProQuest One Applied & Life Sciences ProQuest One Academic ProQuest One Academic UKI Edition ProQuest One Psychology Engineering Collection Environmental Science Collection ProQuest Central Basic University of Michigan Genetics Abstracts SIRS Editorial Environment Abstracts MEDLINE - Academic Hyper Article en Ligne (HAL) Hyper Article en Ligne (HAL) (Open Access) PubMed Central (Full Participant titles) |
DatabaseTitle | CrossRef MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) Agricultural Science Database ProQuest One Psychology Research Library Prep ProQuest Central Student Oncogenes and Growth Factors Abstracts ProQuest Advanced Technologies & Aerospace Collection ProQuest Central Essentials Nucleic Acids Abstracts elibrary ProQuest AP Science SciTech Premium Collection Environmental Sciences and Pollution Management ProQuest One Applied & Life Sciences ProQuest One Sustainability Health Research Premium Collection Meteorological & Geoastrophysical Abstracts Natural Science Collection Health & Medical Research Collection Biological Science Collection Chemoreception Abstracts ProQuest Central (New) ProQuest Medical Library (Alumni) Engineering Collection Advanced Technologies & Aerospace Collection Engineering Database Virology and AIDS Abstracts ProQuest Science Journals (Alumni Edition) ProQuest Biological Science Collection ProQuest One Academic Eastern Edition Earth, Atmospheric & Aquatic Science Database Agricultural Science Collection ProQuest Hospital Collection ProQuest Technology Collection Health Research Premium Collection (Alumni) Biological Science Database Ecology Abstracts Neurosciences Abstracts ProQuest Hospital Collection (Alumni) Biotechnology and BioEngineering Abstracts Environmental Science Collection Entomology Abstracts Nursing & Allied Health Premium ProQuest Health & Medical Complete ProQuest One Academic UKI Edition Environmental Science Database ProQuest Nursing & Allied Health Source (Alumni) Engineering Research Database ProQuest One Academic Calcium & Calcified Tissue Abstracts Meteorological & Geoastrophysical Abstracts - Academic ProQuest One Academic (New) University of Michigan Technology Collection Technology Research Database ProQuest One Academic Middle East (New) SIRS Editorial Materials Science Collection ProQuest Health & Medical Complete (Alumni) ProQuest Central (Alumni Edition) ProQuest One Community College ProQuest One Health & Nursing Research Library (Alumni Edition) ProQuest Natural Science Collection ProQuest Pharma Collection ProQuest Biology Journals (Alumni Edition) ProQuest Central Earth, Atmospheric & Aquatic Science Collection ProQuest Health & Medical Research Collection Genetics Abstracts ProQuest Engineering Collection Health and Medicine Complete (Alumni Edition) ProQuest Central Korea Bacteriology Abstracts (Microbiology B) Algology Mycology and Protozoology Abstracts (Microbiology C) Agricultural & Environmental Science Collection AIDS and Cancer Research Abstracts Materials Science Database ProQuest Research Library ProQuest Materials Science Collection ProQuest Public Health ProQuest Central Basic ProQuest Science Journals ProQuest Nursing & Allied Health Source ProQuest Psychology Journals (Alumni) ProQuest SciTech Collection Advanced Technologies & Aerospace Database ProQuest Medical Library ProQuest Psychology Journals Animal Behavior Abstracts Materials Science & Engineering Collection Immunology Abstracts Environment Abstracts ProQuest Central (Alumni) MEDLINE - Academic |
DatabaseTitleList | MEDLINE - Academic Agricultural Science Database CrossRef MEDLINE |
Database_xml | – sequence: 1 dbid: C6C name: Springer Nature OA Free Journals url: http://www.springeropen.com/ sourceTypes: Publisher – sequence: 2 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 3 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database – sequence: 4 dbid: 8FG name: ProQuest Technology Collection url: https://search.proquest.com/technologycollection1 sourceTypes: Aggregation Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Sciences (General) Physics |
EISSN | 1476-4687 |
EndPage | 724 |
ExternalDocumentID | PMC9217749 oai_HAL_hal_04917729v1 35705810 10_1038_s41586_022_04800_3 |
Genre | Historical Article Journal Article |
GeographicLocations | Kyrgyzstan Eurasia Lake Issyk-Kul |
GeographicLocations_xml | – name: Kyrgyzstan – name: Lake Issyk-Kul – name: Eurasia |
GrantInformation_xml | – fundername: European Research Council grantid: 771234 |
GroupedDBID | --- --Z -DZ -ET -~X .55 .CO .XZ 07C 0R~ 0WA 123 186 1OL 1VR 29M 2KS 2XV 39C 41X 53G 5RE 6TJ 70F 7RV 7X2 7X7 7XC 85S 88A 88E 88I 8AF 8AO 8C1 8CJ 8FE 8FG 8FH 8FI 8FJ 8G5 8R4 8R5 8WZ 97F 97L A6W A7Z AAEEF AAHBH AAHTB AAIKC AAKAB AAMNW AASDW AAYEP AAYZH AAZLF ABDQB ABFSI ABIVO ABJCF ABJNI ABLJU ABOCM ABPEJ ABPPZ ABUWG ABWJO ABZEH ACBEA ACBWK ACGFO ACGFS ACGOD ACIWK ACKOT ACMJI ACNCT ACPRK ACWUS ADBBV ADFRT ADUKH AENEX AEUYN AFBBN AFFNX AFKRA AFLOW AFRAH AFSHS AGAYW AGHSJ AGHTU AGOIJ AGSOS AHMBA AHSBF AIDUJ ALFFA ALIPV ALMA_UNASSIGNED_HOLDINGS AMTXH ARAPS ARMCB ASPBG ATCPS ATWCN AVWKF AXYYD AZFZN AZQEC BBNVY BCU BEC BENPR BGLVJ BHPHI BIN BKEYQ BKKNO BKSAR BPHCQ BVXVI C6C CCPQU CJ0 CS3 D1I D1J D1K DU5 DWQXO E.- E.L EAP EBS EE. EMH EPS EX3 EXGXG F5P FAC FEDTE FQGFK FSGXE FYUFA GNUQQ GUQSH HCIFZ HG6 HMCUK HVGLF HZ~ IAO ICQ IEA IEP IGS IH2 IHR INH INR IOF IPY ISR K6- KB. KOO L6V L7B LK5 LK8 LSO M0K M1P M2M M2O M2P M7P M7R M7S N9A NAPCQ NEPJS O9- OBC OES OHH OMK OVD P2P P62 PATMY PCBAR PDBOC PKN PQQKQ PROAC PSQYO PSYQQ PTHSS PYCSY Q2X R05 RND RNS RNT RNTTT RXW S0X SC5 SHXYY SIXXV SJFOW SJN SNYQT SOJ TAE TAOOD TBHMF TDRGL TEORI TN5 TSG TWZ U5U UIG UKHRP UKR UMD UQL VQA VVN WH7 WOW X7M XIH XKW XZL Y6R YAE YCJ YFH YIF YIN YNT YOC YQT YR2 YR5 YXB YZZ Z5M ZCA ~02 ~7V ~88 ~KM AARCD AAYXX ABFSG ACMFV ACSTC AEZWR AFANA AFHIU AHWEU AIXLP ALPWD ATHPR CITATION PHGZM PHGZT .-4 .GJ .HR 00M 08P 1CY 1VW 354 3EH 3O- 4.4 41~ 42X 4R4 663 79B 9M8 A8Z AAJYS AAKAS AAVBQ AAYOK ABAWZ ABDBF ABDPE ABEFU ABMOR ABNNU ABTAH ACBNA ACBTR ACRPL ACTDY ACUHS ADNMO ADRHT ADYSU ADZCM AETEA AFFDN AFHKK AGCDD AGGDT AGNAY AIDAL AIYXT AJUXI APEBS ARTTT B0M BCR BDKGC BES BKOMP BLC CGR CUY CVF DB5 DO4 EAD EAS EAZ EBC EBD EBO ECC ECM EIF EJD EMB EMF EMK EMOBN EPL ESE ESN ESX FA8 I-F ITC J5H L-9 LGEZI LOTEE MVM N4W NADUK NEJ NFIDA NPM NXXTH ODYON OHT P-O PEA PM3 PV9 QS- R4F RHI SKT SV3 TH9 TUD TUS UAO UBY UHB USG VOH X7L XOL YJ6 YQI YQJ YV5 YXA YYP YYQ ZCG ZE2 ZGI ZHY ZKB ZKG ZY4 ~8M ~G0 3V. 7QG 7QL 7QP 7QR 7SN 7SS 7ST 7T5 7TG 7TK 7TM 7TO 7U9 7XB 8FD 8FK AFKWF C1K FR3 H94 K9. KL. M7N MBDVC P64 PJZUB PKEHL PPXIY PQEST PQGLB PQUKI Q9U RC3 SOI 7X8 1XC UMC VOOES 5PM |
ID | FETCH-LOGICAL-c508t-2c031f522b99fd27a049c52f857cf739f8fc929aca0bbbb4d9d8767a448a5f913 |
IEDL.DBID | C6C |
ISSN | 0028-0836 1476-4687 |
IngestDate | Thu Aug 21 18:20:17 EDT 2025 Fri May 09 12:21:12 EDT 2025 Fri Jul 11 16:54:37 EDT 2025 Sat Aug 23 12:42:41 EDT 2025 Thu Apr 03 07:01:33 EDT 2025 Tue Jul 01 02:32:38 EDT 2025 Thu Apr 24 22:50:48 EDT 2025 Fri Feb 21 02:39:13 EST 2025 |
IsDoiOpenAccess | true |
IsOpenAccess | true |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 7915 |
Language | English |
License | 2022. The Author(s). Distributed under a Creative Commons Attribution 4.0 International License: http://creativecommons.org/licenses/by/4.0 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-c508t-2c031f522b99fd27a049c52f857cf739f8fc929aca0bbbb4d9d8767a448a5f913 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 14 content type line 23 |
ORCID | 0000-0001-6398-2177 0000-0002-6460-145X 0000-0003-2937-3006 0000-0002-6745-9903 0000-0002-3615-3936 0000-0002-9499-6472 0000-0001-9144-3920 0000-0002-5533-0686 0000-0002-5657-018X 0000-0003-2475-2007 0000-0002-6490-8101 |
OpenAccessLink | https://www.nature.com/articles/s41586-022-04800-3 |
PMID | 35705810 |
PQID | 2680630794 |
PQPubID | 40569 |
PageCount | 7 |
ParticipantIDs | pubmedcentral_primary_oai_pubmedcentral_nih_gov_9217749 hal_primary_oai_HAL_hal_04917729v1 proquest_miscellaneous_2677572876 proquest_journals_2680630794 pubmed_primary_35705810 crossref_primary_10_1038_s41586_022_04800_3 crossref_citationtrail_10_1038_s41586_022_04800_3 springer_journals_10_1038_s41586_022_04800_3 |
ProviderPackageCode | CITATION AAYXX |
PublicationCentury | 2000 |
PublicationDate | 2022-06-23 |
PublicationDateYYYYMMDD | 2022-06-23 |
PublicationDate_xml | – month: 06 year: 2022 text: 2022-06-23 day: 23 |
PublicationDecade | 2020 |
PublicationPlace | London |
PublicationPlace_xml | – name: London – name: England |
PublicationSubtitle | International weekly journal of science |
PublicationTitle | Nature (London) |
PublicationTitleAbbrev | Nature |
PublicationTitleAlternate | Nature |
PublicationYear | 2022 |
Publisher | Nature Publishing Group UK Nature Publishing Group |
Publisher_xml | – name: Nature Publishing Group UK – name: Nature Publishing Group |
References | LiHThe Sequence Alignment/Map format and SAMtoolsBioinformatics2009252078207919505943272300210.1093/bioinformatics/btp3521:CAS:528:DC%2BD1MXpslertr8%3D Andrades ValtueñaAThe Stone Age plague and its persistence in EurasiaCurr. Biol.20172736833691.e82917489310.1016/j.cub.2017.10.0251:CAS:528:DC%2BC2sXhvVOitbnI FaithDPConservation evaluation and phylogenetic diversityBiol. Conserv.19926111010.1016/0006-3207(92)91201-3 FazlinejadAAhmadiFThe Black Death in Iran, according to Iranian historical accounts from the fourteenth through fifteenth centuriesJ. Persianate Stud.201811567110.1163/18747167-12341321 O’LearyNAReference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotationNucleic Acids Res.201644D733D7452655380410.1093/nar/gkv11891:CAS:528:DC%2BC2sXhtV2nsr3J EfronBTibshiraniRBootstrap methods for standard errors, confidence intervals, and other measures of statistical accuracyStat. Sci.1986154748332750587.62082 Dols, M. W. The Black Death in the Middle East (Princeton Univ. Press, 1979). Velsko, I., Skourtanioti, E. & Brandt, G. Ancient DNA extraction from skeletal material. protocols.iohttps://doi.org/10.17504/protocols.io.baksicwe (2020). KembelSWPicante: R tools for integrating phylogenies and ecologyBioinformatics201026146314641:CAS:528:DC%2BC3cXmsVGnsbw%3D2039528510.1093/bioinformatics/btq166 KocherATen millennia of hepatitis B virus evolutionScience20213741821882021Sci...374..182K1:CAS:528:DC%2BB3MXit1eqsbnI3461855910.1126/science.abi5658 DabneyJComplete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragmentsProc. Natl Acad. Sci. USA201311015758157632013PNAS..11015758D1:CAS:528:DC%2BC3sXhs1WlurnO24019490378578510.1073/pnas.1314445110 MüllnerDFastcluster: fast hierarchical, agglomerative clustering routines for R and PythonJ. Stat. Softw.20135311810.18637/jss.v053.i09 PourhosseinBEsmaeiliSGyuraneczMMostafaviETularemia and plague survey in rodents in an earthquake zone in southeastern IranEpidemiol. Health201537e201505026602769472222510.4178/epih/e2015050 HusonDHMEGAN Community Edition - interactive exploration and analysis of large-scale microbiome sequencing dataPLoS Comput. Biol.201612e100495727327495491570010.1371/journal.pcbi.10049571:CAS:528:DC%2BC28Xhs1yntbbI AlfaniGMurphyTEPlague and lethal epidemics in the pre-industrial worldJ. Econ. Hist.20177731434310.1017/S0022050717000092 HüblerRHOPS: automated detection and authentication of pathogen DNA in archaeological remainsGenome Biol.20192028031842945691304710.1186/s13059-019-1903-01:CAS:528:DC%2BC1MXisVSntb3P KumarSStecherGTamuraKMEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasetsMol. Biol. Evol.201633187018741:CAS:528:DC%2BC28XhsF2ltrzN27004904821082310.1093/molbev/msw054 JónssonHGinolhacASchubertMJohnsonPLFOrlandoLmapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parametersBioinformatics2013291682168423613487369463410.1093/bioinformatics/btt1931:CAS:528:DC%2BC3sXhtVaktrvI Benedictow, O. J. The Black Death, 1346–1353: the Complete History (Boydell & Brewer, 2004). NamouchiAIntegrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval PeriodProc. Natl Acad. Sci. USA2018115E11790E117971:CAS:528:DC%2BC1cXisVyhu7vM30478041629493310.1073/pnas.1812865115 KeyFMEmergence of human-adapted Salmonella enterica is linked to the Neolithization processNat. Ecol. Evol.2020432433332094538718608210.1038/s41559-020-1106-9 BosKIEighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focuseLife20165e1299426795402479895510.7554/eLife.12994 StamatakisARAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogeniesBioinformatics201430131213131:CAS:528:DC%2BC2cXmvFCjsbc%3D24451623399814410.1093/bioinformatics/btu033 StadlerTKühnertDBonhoefferSDrummondAJBirth–death skyline plot reveals temporal changes of epidemic spread in HIV and hepatitis C virus (HCV)Proc. Natl Acad. Sci. USA20131102282332013PNAS..110..228S1:CAS:528:DC%2BC3sXnvVWltA%3D%3D2324828610.1073/pnas.1207965110 BarkerHLaying the corpses to rest: grain, embargoes, and Yersinia pestis in the Black Sea, 1346–48Speculum2021969712610.1086/711596 McCormickMRats, communications, and plague: toward an ecological historyJ. Interdiscip. Hist.20033412510.1162/002219503322645439 KircherMSawyerSMeyerMDouble indexing overcomes inaccuracies in multiplex sequencing on the Illumina platformNucleic Acids Res.201240e31:CAS:528:DC%2BC38Xit1GmtQ%3D%3D2202137610.1093/nar/gkr771 BouckaertRBEAST 2.5: an advanced software platform for Bayesian evolutionary analysisPLoS Comput. Biol.201915e10066501:CAS:528:DC%2BC1MXhtlWlsLzO30958812647282710.1371/journal.pcbi.1006650 ZhouZThe EnteroBase user’s guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversityGenome Res.2020301381521:CAS:528:DC%2BB3cXmtVSmsLs%3D31809257696158410.1101/gr.251678.119 SabinSA seventeenth-century Mycobacterium tuberculosis genome supports a Neolithic emergence of the Mycobacterium tuberculosis complexGenome Biol.2020212011:CAS:528:DC%2BB3cXhsFyktb%2FP32778135741820410.1186/s13059-020-02112-1 RohlandNHarneyEMallickSNordenfeltSReichDPartial uracil-DNA-glycosylase treatment for screening of ancient DNAPhilos. Trans. R. Soc. Lond. B20153702013062410.1098/rstb.2013.06241:CAS:528:DC%2BC2MXhsFemsr0%3D ZhouDGenetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtusJ. Bacteriol.2004186514751521:CAS:528:DC%2BD2cXmtFeqt7w%3D1526295145162710.1128/JB.186.15.5147-5152.2004 Benedictow, O. J. The Complete History of the Black Death (Boydell & Brewer, 2021). GreenMHHow a microbe becomes a pandemic: a new story of the Black DeathLancet Microbe20201e311e3121:CAS:528:DC%2BB3MXltF2nsw%3D%3D3554418210.1016/S2666-5247(20)30176-2 SpyrouMAAnalysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plagueNat. Commun.201892018NatCo...9.2234S29884871599372010.1038/s41467-018-04550-91:CAS:528:DC%2BC1cXhtFemtrbE SpyrouMABosKIHerbigAKrauseJAncient pathogen genomics as an emerging tool for infectious disease researchNat. Rev. Genet.2019203233401:CAS:528:DC%2BC1MXosFKhsbw%3D30953039709703810.1038/s41576-019-0119-1 SchmidBVClimate-driven introduction of the Black Death and successive plague reintroductions into EuropeProc. Natl Acad. Sci. USA2015112302030252015PNAS..112.3020S1:CAS:528:DC%2BC2MXjtFemtLo%3D25713390436418110.1073/pnas.1412887112 Clark, G. A Farewell to Alms: A Brief Economic History of the World Vol. 25 (Princeton Univ. Press, 2008). Dennis, D. T. et al. Plague Manual: Epidemiology, Distribution, Surveillance and Control (World Health Organization, 1999). Stahl, R. et al. Illumina double-stranded DNA dual indexing for ancient DNA. protocols.iohttps://doi.org/10.17504/protocols.io.bakticwn (2020). DeanKRHuman ectoparasites and the spread of plague in Europe during the Second PandemicProc. Natl Acad. Sci. USA2018115130413091:CAS:528:DC%2BC1cXovFCntg%3D%3D29339508581941810.1073/pnas.1715640115 BosKIPre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosisNature20145144944972014Natur.514..494B1:CAS:528:DC%2BC2cXhvVSmtbnP25141181455067310.1038/nature13591 McNeill, W. H. Plagues and Peoples (Anchor, 1976). FancyNAGGreenMHPlague and the fall of Baghdad (1258)Med. Hist.202165157177866304410.1017/mdh.2021.3 SpyrouMAPhylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomesNat. Commun.20191044702019NatCo..10.4470S31578321677505510.1038/s41467-019-12154-01:CAS:528:DC%2BC1MXhvFSqtrbK GreenMHThe four Black DeathsAm. Hist. Rev.20201251601163110.1093/ahr/rhaa511 R Core Team. R: A Language and Environment for Statistical Computing (R Foundation for Statistical Computing, 2019). GansaugeM-TAximu-PetriANagelSMeyerMManual and automated preparation of single-stranded DNA libraries for the sequencing of DNA from ancient biological remains and other sources of highly degraded DNANat. Protoc.202015227923001:CAS:528:DC%2BB3cXhtlSht7vF3261227810.1038/s41596-020-0338-0 KellerMAncient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541–750)Proc. Natl Acad. Sci. USA201911612363123721:CAS:528:DC%2BC1MXhtFyktr%2FE31164419658967310.1073/pnas.1820447116 GuellilMA genomic and historical synthesis of plague in 18th century EurasiaProc. Natl Acad. Sci. USA202011728328283351:CAS:528:DC%2BB3cXitlWnu7nL33106412766809510.1073/pnas.2009677117 MathiesonIGenome-wide patterns of selection in 230 ancient EurasiansNature20155284995032015Natur.528..499M1:CAS:528:DC%2BC2MXhvVOqs7fF26595274491875010.1038/nature16152 ZhouZGrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogensGenome Res.201828139514041:CAS:528:DC%2BC1cXhsl2is7bF30049790612063310.1101/gr.232397.117 HymesREpilogue: a hypothesis on the East Asian beginnings of the Yersinia pestis polytomyMediev. Globe2015128530810.17302/TMG.1-1.11 GiffinKA treponemal genome from an historic plague victim supports a recent emergence of yaws and its presence in 15th century EuropeSci. Rep.20201094992020NatSR..10.9499G1:CAS:528:DC%2BB3cXhtFOhsLzP32528126729003410.1038/s41598-020-66012-x RambautALamTTMax CarvalhoLPybusOGExploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)Virus Evol.20162vew00727774300498988210.1093/ve/vew007 AnisimovAPLindlerLEPierGBIntraspecific diversity of Yersinia pestisClin. Microbiol. Rev.2004174344641:CAS:528:DC%2BD2cXktl2isro%3D1508450938740610.1128/CMR.17.2.434-464.2004 DrummondAJRambautAShapiroBPybusOGBayesian coalescent inference of past population dynamics from molecular sequencesMol. Biol. Evol.200522118511921:CAS:528:DC%2BD2MXjvVKitb4%3D1570324410.1093/molbev/msi103 SchubertMLindgreenSOrlandoLAdapterRemoval v2: rapid adapter trimming, identification, and read mergingBMC Res. Notes201692686822147516341 A Mahmoudi (4800_CR97) 2021; 16 M Schubert (4800_CR60) 2016; 9 I Mathieson (4800_CR67) 2015; 528 M-T Gansauge (4800_CR65) 2020; 15 Ş Pamuk (4800_CR15) 2007; 11 VV Kutyrev (4800_CR19) 2018; 9 SW Kembel (4800_CR82) 2010; 26 NA O’Leary (4800_CR61) 2016; 44 D Zhou (4800_CR79) 2004; 186 S Duchene (4800_CR101) 2020; 37 DH Huson (4800_CR72) 2016; 12 D Müllner (4800_CR85) 2013; 53 MA Spyrou (4800_CR41) 2019; 20 G Morelli (4800_CR36) 2010; 42 FM Key (4800_CR92) 2020; 4 MH Green (4800_CR33) 2020; 1 B Pourhossein (4800_CR44) 2015; 37 BV Schmid (4800_CR46) 2015; 112 4800_CR14 4800_CR11 4800_CR12 H Barker (4800_CR47) 2021; 96 H Li (4800_CR63) 2009; 25 S Kumar (4800_CR86) 2016; 33 RE Kass (4800_CR99) 1995; 90 NAG Fancy (4800_CR42) 2021; 65 GA Eroshenko (4800_CR18) 2017; 12 Z Zhou (4800_CR50) 2018; 28 H Jónsson (4800_CR64) 2013; 29 4800_CR27 KI Bos (4800_CR74) 2014; 514 J Norris (4800_CR4) 1977; 51 4800_CR23 W Haak (4800_CR69) 2015; 522 N Rohland (4800_CR56) 2015; 370 T Stadler (4800_CR94) 2013; 110 AA Kislichkina (4800_CR77) 2017; 5 A Fazlinejad (4800_CR24) 2018; 11 A Namouchi (4800_CR21) 2018; 115 A Peltzer (4800_CR70) 2016; 17 P Slavin (4800_CR9) 2019; 50 M Keller (4800_CR30) 2019; 116 MA DePristo (4800_CR73) 2011; 43 A Rambaut (4800_CR100) 2016; 2 R Hübler (4800_CR29) 2019; 20 M Guellil (4800_CR20) 2020; 117 C Warinner (4800_CR31) 2017; 18 B Mühlemann (4800_CR89) 2020; 369 ÅJ Vågene (4800_CR62) 2018; 2 AA Kislichkina (4800_CR78) 2018; 6 KI Bos (4800_CR32) 2016; 5 M Meyer (4800_CR55) 2010; 2010 A Stamatakis (4800_CR81) 2014; 30 4800_CR49 4800_CR45 JM Gómez (4800_CR48) 2017; 7 Y Cui (4800_CR16) 2013; 110 AJ Drummond (4800_CR88) 2005; 22 G Alfani (4800_CR13) 2017; 77 P Sagulenko (4800_CR35) 2018; 4 Q Fu (4800_CR68) 2013; 110 4800_CR51 B Efron (4800_CR84) 1986; 1 4800_CR52 MA Spyrou (4800_CR34) 2018; 9 4800_CR1 A Andrades Valtueña (4800_CR66) 2017; 27 4800_CR5 4800_CR59 4800_CR3 4800_CR57 4800_CR2 D Darriba (4800_CR95) 2012; 9 4800_CR8 KI Bos (4800_CR10) 2011; 478 4800_CR7 4800_CR6 4800_CR54 P de Barros Damgaard (4800_CR39) 2018; 557 KR Dean (4800_CR98) 2018; 115 AP Anisimov (4800_CR40) 2004; 17 AA Kislichkina (4800_CR80) 2018; 6 A Kocher (4800_CR91) 2021; 374 MH Green (4800_CR26) 2020; 125 Q Fu (4800_CR28) 2015; 524 J Susat (4800_CR38) 2021; 35 R Bouckaert (4800_CR87) 2019; 15 M Feldman (4800_CR76) 2016; 33 R Hymes (4800_CR22) 2015; 1 MA Spyrou (4800_CR17) 2019; 10 J Dabney (4800_CR53) 2013; 110 S Borsch (4800_CR25) 2017; 134 M McCormick (4800_CR43) 2003; 34 VJ Schuenemann (4800_CR71) 2011; 108 DP Faith (4800_CR83) 1992; 61 Z Zhou (4800_CR37) 2020; 30 M Kircher (4800_CR58) 2012; 40 K Giffin (4800_CR90) 2020; 10 S Sabin (4800_CR93) 2020; 21 V Gorbunova (4800_CR96) 2008; 30 4800_CR75 35778565 - Nat Rev Microbiol. 2022 Sep;20(9):509. doi: 10.1038/s41579-022-00769-y. 35705867 - Nature. 2022 Jun;606(7915):635-636. doi: 10.1038/d41586-022-01673-4. |
References_xml | – reference: PourhosseinBEsmaeiliSGyuraneczMMostafaviETularemia and plague survey in rodents in an earthquake zone in southeastern IranEpidemiol. Health201537e201505026602769472222510.4178/epih/e2015050 – reference: JónssonHGinolhacASchubertMJohnsonPLFOrlandoLmapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parametersBioinformatics2013291682168423613487369463410.1093/bioinformatics/btt1931:CAS:528:DC%2BC3sXhtVaktrvI – reference: FeldmanMA high-coverage Yersinia pestis genome from a sixth-century Justinianic plague victimMol. Biol. Evol.201633291129231:CAS:528:DC%2BC2sXhsVyns74%3D27578768506232410.1093/molbev/msw170 – reference: Stahl, R. et al. Illumina double-stranded DNA dual indexing for ancient DNA. protocols.iohttps://doi.org/10.17504/protocols.io.bakticwn (2020). – reference: SchmidBVClimate-driven introduction of the Black Death and successive plague reintroductions into EuropeProc. Natl Acad. Sci. USA2015112302030252015PNAS..112.3020S1:CAS:528:DC%2BC2MXjtFemtLo%3D25713390436418110.1073/pnas.1412887112 – reference: SpyrouMAPhylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomesNat. Commun.20191044702019NatCo..10.4470S31578321677505510.1038/s41467-019-12154-01:CAS:528:DC%2BC1MXhvFSqtrbK – reference: SpyrouMAAnalysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plagueNat. Commun.201892018NatCo...9.2234S29884871599372010.1038/s41467-018-04550-91:CAS:528:DC%2BC1cXhtFemtrbE – reference: Velsko, I., Skourtanioti, E. & Brandt, G. Ancient DNA extraction from skeletal material. protocols.iohttps://doi.org/10.17504/protocols.io.baksicwe (2020). – reference: EroshenkoGAYersinia pestis strains of ancient phylogenetic branch 0.ANT are widely spread in the high-mountain plague foci of KyrgyzstanPLoS ONE201712e018723029073248565818010.1371/journal.pone.01872301:CAS:528:DC%2BC1cXhsFKisb%2FP – reference: HüblerRHOPS: automated detection and authentication of pathogen DNA in archaeological remainsGenome Biol.20192028031842945691304710.1186/s13059-019-1903-01:CAS:528:DC%2BC1MXisVSntb3P – reference: GiffinKA treponemal genome from an historic plague victim supports a recent emergence of yaws and its presence in 15th century EuropeSci. Rep.20201094992020NatSR..10.9499G1:CAS:528:DC%2BB3cXhtFOhsLzP32528126729003410.1038/s41598-020-66012-x – reference: LiHThe Sequence Alignment/Map format and SAMtoolsBioinformatics2009252078207919505943272300210.1093/bioinformatics/btp3521:CAS:528:DC%2BD1MXpslertr8%3D – reference: MorelliGYersinia pestis genome sequencing identifies patterns of global phylogenetic diversityNat. Genet.201042114011431:CAS:528:DC%2BC3cXhtlGrsL3O21037571299989210.1038/ng.705 – reference: Campbell, B. M. The Great Transition. Climate, Disease and Society in the Late-Medieval World (Cambridge Univ. Press, 2016). – reference: VågeneÅJSalmonella enterica genomes from victims of a major sixteenth-century epidemic in MexicoNat. Ecol. Evol.201825205282933557710.1038/s41559-017-0446-6 – reference: Neumann, G. U., Andrades Valtuena, A., Fellows Yates, J. A., Stahl, R. & Brandt, G. Tooth sampling from the inner pulp chamber for ancient DNA extraction V.2. protocols.iohttps://doi.org/10.17504/protocols.io.bqebmtan (2020). – reference: KutyrevVVPhylogeny and classification of Yersinia pestis through the lens of strains from the plague foci of Commonwealth of Independent StatesFront. Microbiol.20189110629887859598097010.3389/fmicb.2018.01106 – reference: NorrisJEast or west? The geographic origin of the Black DeathBull. Hist. Med.1977511241:STN:280:DyaE2s7ot1KitQ%3D%3D324542 – reference: DarribaDTaboadaGLDoalloRPosadaDjModelTest 2: more models, new heuristics and parallel computingNat. Methods201297721:CAS:528:DC%2BC38XhtFWmsbfP22847109459475610.1038/nmeth.2109 – reference: GansaugeM-TAximu-PetriANagelSMeyerMManual and automated preparation of single-stranded DNA libraries for the sequencing of DNA from ancient biological remains and other sources of highly degraded DNANat. Protoc.202015227923001:CAS:528:DC%2BB3cXhtlSht7vF3261227810.1038/s41596-020-0338-0 – reference: MahmoudiAPlague reservoir species throughout the worldIntegr. Zool.2021168208333326445810.1111/1749-4877.12511 – reference: Dennis, D. T. et al. Plague Manual: Epidemiology, Distribution, Surveillance and Control (World Health Organization, 1999). – reference: KembelSWPicante: R tools for integrating phylogenies and ecologyBioinformatics201026146314641:CAS:528:DC%2BC3cXmsVGnsbw%3D2039528510.1093/bioinformatics/btq166 – reference: SpyrouMABosKIHerbigAKrauseJAncient pathogen genomics as an emerging tool for infectious disease researchNat. Rev. Genet.2019203233401:CAS:528:DC%2BC1MXosFKhsbw%3D30953039709703810.1038/s41576-019-0119-1 – reference: BosKIPre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosisNature20145144944972014Natur.514..494B1:CAS:528:DC%2BC2cXhvVSmtbnP25141181455067310.1038/nature13591 – reference: SagulenkoPPullerVNeherRATreeTime: maximum-likelihood phylodynamic analysisVirus Evol.20184vex04229340210575892010.1093/ve/vex042 – reference: DucheneSBayesian evaluation of temporal signal in measurably evolving populationsMol. Biol. Evol.202037336333791:CAS:528:DC%2BB3MXht1amtLbO3289570710.1093/molbev/msaa163 – reference: RambautALamTTMax CarvalhoLPybusOGExploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)Virus Evol.20162vew00727774300498988210.1093/ve/vew007 – reference: KislichkinaAAEight whole-genome assemblies of Yersinia pestis subsp. microtus bv. Caucasica isolated from the common vole (Microtus arvalis) plague focus in Dagestan, RussiaGenome Announc.20175e00847-1728839028557141410.1128/genomeA.00847-17 – reference: KislichkinaAANine whole-genome assemblies of Yersinia pestis subsp. microtus bv. Altaica strains isolated from the Altai Mountain natural plague focus (no. 36) in RussiaGenome Announc.20186e01440-17293483365773721 – reference: Dols, M. W. The Black Death in the Middle East (Princeton Univ. Press, 1979). – reference: PamukŞThe Black Death and the origins of the ‘Great Divergence’ across Europe, 1300–1600Eur. Rev. Econ. Hist.20071128931710.1017/S1361491607002031 – reference: DabneyJComplete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragmentsProc. Natl Acad. Sci. USA201311015758157632013PNAS..11015758D1:CAS:528:DC%2BC3sXhs1WlurnO24019490378578510.1073/pnas.1314445110 – reference: DePristoMAA framework for variation discovery and genotyping using next-generation DNA sequencing dataNat. Genet.2011434914981:CAS:528:DC%2BC3MXksFWguro%3D21478889308346310.1038/ng.806 – reference: SchubertMLindgreenSOrlandoLAdapterRemoval v2: rapid adapter trimming, identification, and read mergingBMC Res. Notes2016926868221475163410.1186/s13104-016-1900-2 – reference: CuiYHistorical variations in mutation rate in an epidemic pathogen, Yersinia pestisProc. Natl Acad. Sci. USA20131105775822013PNAS..110..577C1:CAS:528:DC%2BC3sXhtFOhur4%3D2327180310.1073/pnas.1205750110 – reference: AnisimovAPLindlerLEPierGBIntraspecific diversity of Yersinia pestisClin. Microbiol. Rev.2004174344641:CAS:528:DC%2BD2cXktl2isro%3D1508450938740610.1128/CMR.17.2.434-464.2004 – reference: ZhouZGrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogensGenome Res.201828139514041:CAS:528:DC%2BC1cXhsl2is7bF30049790612063310.1101/gr.232397.117 – reference: RohlandNHarneyEMallickSNordenfeltSReichDPartial uracil-DNA-glycosylase treatment for screening of ancient DNAPhilos. Trans. R. Soc. Lond. B20153702013062410.1098/rstb.2013.06241:CAS:528:DC%2BC2MXhsFemsr0%3D – reference: KellerMAncient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541–750)Proc. Natl Acad. Sci. USA201911612363123721:CAS:528:DC%2BC1MXhtFyktr%2FE31164419658967310.1073/pnas.1820447116 – reference: Benedictow, O. J. The Complete History of the Black Death (Boydell & Brewer, 2021). – reference: DrummondAJRambautAShapiroBPybusOGBayesian coalescent inference of past population dynamics from molecular sequencesMol. Biol. Evol.200522118511921:CAS:528:DC%2BD2MXjvVKitb4%3D1570324410.1093/molbev/msi103 – reference: WarinnerCA robust framework for microbial archaeologyAnnu. Rev. Genom. Hum. Genet.2017183213561:CAS:528:DC%2BC2sXmvFWgurc%3D10.1146/annurev-genom-091416-035526 – reference: NamouchiAIntegrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval PeriodProc. Natl Acad. Sci. USA2018115E11790E117971:CAS:528:DC%2BC1cXisVyhu7vM30478041629493310.1073/pnas.1812865115 – reference: Varlik, N. Plague and Empire in the Early Modern Mediterranean World (Cambridge Univ. Press, 2015). – reference: GuellilMA genomic and historical synthesis of plague in 18th century EurasiaProc. Natl Acad. Sci. USA202011728328283351:CAS:528:DC%2BB3cXitlWnu7nL33106412766809510.1073/pnas.2009677117 – reference: BouckaertRBEAST 2.5: an advanced software platform for Bayesian evolutionary analysisPLoS Comput. Biol.201915e10066501:CAS:528:DC%2BC1MXhtlWlsLzO30958812647282710.1371/journal.pcbi.1006650 – reference: StamatakisARAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogeniesBioinformatics201430131213131:CAS:528:DC%2BC2cXmvFCjsbc%3D24451623399814410.1093/bioinformatics/btu033 – reference: EfronBTibshiraniRBootstrap methods for standard errors, confidence intervals, and other measures of statistical accuracyStat. Sci.1986154748332750587.62082 – reference: Chouin, G. Reflections on plague in African history (14th–19th c.). Afriqueshttps://doi.org/10.4000/afriques.2228 (2018). – reference: BarkerHLaying the corpses to rest: grain, embargoes, and Yersinia pestis in the Black Sea, 1346–48Speculum2021969712610.1086/711596 – reference: KassRERafteryAEBayes factorsJ. Am. Stat. Assoc.19959077379533634020846.6202810.1080/01621459.1995.10476572 – reference: FazlinejadAAhmadiFThe Black Death in Iran, according to Iranian historical accounts from the fourteenth through fifteenth centuriesJ. Persianate Stud.201811567110.1163/18747167-12341321 – reference: Chwolson, D. Syrisch-nestorianische Grabinschriften aus Semirjetschie, neue Folge (Commissionnaires de l’Académie Impériale des Sciences, 1897). – reference: Pollitzer, R. Plague (World Health Organization, 1954). – reference: MühlemannBDiverse variola virus (smallpox) strains were widespread in northern Europe in the Viking AgeScience2020369eaaw89773270384910.1126/science.aaw89771:CAS:528:DC%2BB3cXhsVCmt7rI – reference: BorschSSabraaTRefugees of the Black Death: quantifying rural migration for plague and other environmental disastersAnn. Demogr. Hist.20171346393 – reference: GómezJMVerdúMNetwork theory may explain the vulnerability of medieval human settlements to the Black Death pandemicSci. Rep.20177434672017NatSR...743467G28262733533801810.1038/srep43467 – reference: ZhouDGenetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtusJ. Bacteriol.2004186514751521:CAS:528:DC%2BD2cXmtFeqt7w%3D1526295145162710.1128/JB.186.15.5147-5152.2004 – reference: PeltzerAEAGER: efficient ancient genome reconstructionGenome Biol.20161727036623481519410.1186/s13059-016-0918-z1:CAS:528:DC%2BC28XhtFelurvK – reference: FuQDNA analysis of an early modern human from Tianyuan Cave, ChinaProc. Natl Acad. Sci. USA2013110222322272013PNAS..110.2223F1:CAS:528:DC%2BC3sXjtVersLs%3D23341637356830610.1073/pnas.1221359110 – reference: McNeill, W. H. Plagues and Peoples (Anchor, 1976). – reference: GreenMHThe four Black DeathsAm. Hist. Rev.20201251601163110.1093/ahr/rhaa511 – reference: MathiesonIGenome-wide patterns of selection in 230 ancient EurasiansNature20155284995032015Natur.528..499M1:CAS:528:DC%2BC2MXhvVOqs7fF26595274491875010.1038/nature16152 – reference: KocherATen millennia of hepatitis B virus evolutionScience20213741821882021Sci...374..182K1:CAS:528:DC%2BB3MXit1eqsbnI3461855910.1126/science.abi5658 – reference: McCormickMRats, communications, and plague: toward an ecological historyJ. Interdiscip. Hist.20033412510.1162/002219503322645439 – reference: SusatJA 5,000-year-old hunter–gatherer already plagued by Yersinia pestisCell Rep.2021351092781:CAS:528:DC%2BB3MXhsVKlsbfN3419253710.1016/j.celrep.2021.109278 – reference: KumarSStecherGTamuraKMEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasetsMol. Biol. Evol.201633187018741:CAS:528:DC%2BC28XhsF2ltrzN27004904821082310.1093/molbev/msw054 – reference: Aron, F., Neumann, G. U. & Brandt, G. Half-UDG treated double-stranded ancient DNA library preparation for illumina sequencing. protocols.iohttps://doi.org/10.17504/protocols.io.bmh6k39e (2020). – reference: GreenMHHow a microbe becomes a pandemic: a new story of the Black DeathLancet Microbe20201e311e3121:CAS:528:DC%2BB3MXltF2nsw%3D%3D3554418210.1016/S2666-5247(20)30176-2 – reference: Clark, G. A Farewell to Alms: A Brief Economic History of the World Vol. 25 (Princeton Univ. Press, 2008). – reference: KeyFMEmergence of human-adapted Salmonella enterica is linked to the Neolithization processNat. Ecol. Evol.2020432433332094538718608210.1038/s41559-020-1106-9 – reference: AlfaniGMurphyTEPlague and lethal epidemics in the pre-industrial worldJ. Econ. Hist.20177731434310.1017/S0022050717000092 – reference: DeanKRHuman ectoparasites and the spread of plague in Europe during the Second PandemicProc. Natl Acad. Sci. USA2018115130413091:CAS:528:DC%2BC1cXovFCntg%3D%3D29339508581941810.1073/pnas.1715640115 – reference: Stewart, J. Nestorian Missionary Enterprise: The Story of a Church on Fire (T. & T. Clark, 1928). – reference: HaakWMassive migration from the steppe was a source for Indo-European languages in EuropeNature20155222072112015Natur.522..207H1:CAS:528:DC%2BC2MXktVCnsLc%3D25731166504821910.1038/nature14317 – reference: GorbunovaVBozzellaMJSeluanovARodents for comparative aging studies: from mice to beaversAge (Dordr.)20083011111910.1007/s11357-008-9053-4 – reference: ZhouZThe EnteroBase user’s guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversityGenome Res.2020301381521:CAS:528:DC%2BB3cXmtVSmsLs%3D31809257696158410.1101/gr.251678.119 – reference: FuQAn early modern human from Romania with a recent Neanderthal ancestorNature20155242162192015Natur.524..216F1:CAS:528:DC%2BC2MXhtFyltL7J26098372453738610.1038/nature14558 – reference: SlavinPDeath by the lake: mortality crisis in early fourteenth-century Central AsiaJ. Interdiscip. Hist.201950599010.1162/jinh_a_01376 – reference: MüllnerDFastcluster: fast hierarchical, agglomerative clustering routines for R and PythonJ. Stat. Softw.20135311810.18637/jss.v053.i09 – reference: SchuenemannVJTargeted enrichment of ancient pathogens yielding the pPCP1 plasmid of Yersinia pestis from victims of the Black DeathProc. Natl Acad. Sci. USA2011108E746E7521:CAS:528:DC%2BC3MXht1Cisb3J21876176317906710.1073/pnas.1105107108 – reference: BosKIA draft genome of Yersinia pestis from victims of the Black DeathNature20114785065102011Natur.478..506B1:CAS:528:DC%2BC3MXhtlSkurrJ21993626369019310.1038/nature10549 – reference: MeyerMKircherMIllumina sequencing library preparation for highly multiplexed target capture and sequencingCold Spring Harb. Protoc.20102010pdb.prot54482051618610.1101/pdb.prot5448 – reference: HusonDHMEGAN Community Edition - interactive exploration and analysis of large-scale microbiome sequencing dataPLoS Comput. Biol.201612e100495727327495491570010.1371/journal.pcbi.10049571:CAS:528:DC%2BC28Xhs1yntbbI – reference: SabinSA seventeenth-century Mycobacterium tuberculosis genome supports a Neolithic emergence of the Mycobacterium tuberculosis complexGenome Biol.2020212011:CAS:528:DC%2BB3cXhsFyktb%2FP32778135741820410.1186/s13059-020-02112-1 – reference: KircherMSawyerSMeyerMDouble indexing overcomes inaccuracies in multiplex sequencing on the Illumina platformNucleic Acids Res.201240e31:CAS:528:DC%2BC38Xit1GmtQ%3D%3D2202137610.1093/nar/gkr771 – reference: O’LearyNAReference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotationNucleic Acids Res.201644D733D7452655380410.1093/nar/gkv11891:CAS:528:DC%2BC2sXhtV2nsr3J – reference: FaithDPConservation evaluation and phylogenetic diversityBiol. Conserv.19926111010.1016/0006-3207(92)91201-3 – reference: Benedictow, O. J. The Black Death, 1346–1353: the Complete History (Boydell & Brewer, 2004). – reference: Andrades ValtueñaAThe Stone Age plague and its persistence in EurasiaCurr. Biol.20172736833691.e82917489310.1016/j.cub.2017.10.0251:CAS:528:DC%2BC2sXhvVOitbnI – reference: R Core Team. R: A Language and Environment for Statistical Computing (R Foundation for Statistical Computing, 2019). – reference: BosKIEighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focuseLife20165e1299426795402479895510.7554/eLife.12994 – reference: QGIS Geographic Information Systemhttp://www.qgis.org (QGIS, 2022). – reference: de Barros DamgaardP137 ancient human genomes from across the Eurasian steppesNature20185573693742018Natur.557..369D10.1038/s41586-018-0094-21:CAS:528:DC%2BC1cXptlars7w%3D – reference: KislichkinaAASix whole-genome assemblies of Yersinia pestis subsp. microtus bv. Ulegeica (phylogroup o.PE5) strains isolated from Mongolian natural plague fociGenome Announc.20186e00536-18299300506013636 – reference: StadlerTKühnertDBonhoefferSDrummondAJBirth–death skyline plot reveals temporal changes of epidemic spread in HIV and hepatitis C virus (HCV)Proc. Natl Acad. Sci. USA20131102282332013PNAS..110..228S1:CAS:528:DC%2BC3sXnvVWltA%3D%3D2324828610.1073/pnas.1207965110 – reference: HymesREpilogue: a hypothesis on the East Asian beginnings of the Yersinia pestis polytomyMediev. Globe2015128530810.17302/TMG.1-1.11 – reference: Liu, X. The Silk Road in World History (Oxford Univ. Press, 2010). – reference: Herlihy, D. The Black Death and the Transformation of the West (Harvard Univ. Press, 1997). – reference: FancyNAGGreenMHPlague and the fall of Baghdad (1258)Med. Hist.202165157177866304410.1017/mdh.2021.3 – volume: 110 start-page: 228 year: 2013 ident: 4800_CR94 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1207965110 – volume: 42 start-page: 1140 year: 2010 ident: 4800_CR36 publication-title: Nat. Genet. doi: 10.1038/ng.705 – volume: 90 start-page: 773 year: 1995 ident: 4800_CR99 publication-title: J. Am. Stat. Assoc. doi: 10.1080/01621459.1995.10476572 – volume: 43 start-page: 491 year: 2011 ident: 4800_CR73 publication-title: Nat. Genet. doi: 10.1038/ng.806 – volume: 21 start-page: 201 year: 2020 ident: 4800_CR93 publication-title: Genome Biol. doi: 10.1186/s13059-020-02112-1 – volume: 51 start-page: 1 year: 1977 ident: 4800_CR4 publication-title: Bull. Hist. Med. – volume: 1 start-page: 54 year: 1986 ident: 4800_CR84 publication-title: Stat. Sci. – volume: 65 start-page: 157 year: 2021 ident: 4800_CR42 publication-title: Med. Hist. doi: 10.1017/mdh.2021.3 – volume: 7 start-page: 43467 year: 2017 ident: 4800_CR48 publication-title: Sci. Rep. doi: 10.1038/srep43467 – volume: 478 start-page: 506 year: 2011 ident: 4800_CR10 publication-title: Nature doi: 10.1038/nature10549 – volume: 9 start-page: 1106 year: 2018 ident: 4800_CR19 publication-title: Front. Microbiol. doi: 10.3389/fmicb.2018.01106 – volume: 116 start-page: 12363 year: 2019 ident: 4800_CR30 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1820447116 – ident: 4800_CR2 doi: 10.1515/9781400827817 – ident: 4800_CR75 – volume: 40 start-page: e3 year: 2012 ident: 4800_CR58 publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkr771 – volume: 12 start-page: e1004957 year: 2016 ident: 4800_CR72 publication-title: PLoS Comput. Biol. doi: 10.1371/journal.pcbi.1004957 – volume: 4 start-page: 324 year: 2020 ident: 4800_CR92 publication-title: Nat. Ecol. Evol. doi: 10.1038/s41559-020-1106-9 – volume: 2010 start-page: pdb.prot5448 year: 2010 ident: 4800_CR55 publication-title: Cold Spring Harb. Protoc. doi: 10.1101/pdb.prot5448 – volume: 528 start-page: 499 year: 2015 ident: 4800_CR67 publication-title: Nature doi: 10.1038/nature16152 – volume: 34 start-page: 1 year: 2003 ident: 4800_CR43 publication-title: J. Interdiscip. Hist. doi: 10.1162/002219503322645439 – volume: 6 start-page: e00536- year: 2018 ident: 4800_CR80 publication-title: Genome Announc. – volume: 77 start-page: 314 year: 2017 ident: 4800_CR13 publication-title: J. Econ. Hist. doi: 10.1017/S0022050717000092 – ident: 4800_CR54 doi: 10.17504/protocols.io.baksicwe – ident: 4800_CR14 doi: 10.2307/j.ctvjghwgp – volume: 134 start-page: 63 year: 2017 ident: 4800_CR25 publication-title: Ann. Demogr. Hist. – volume: 514 start-page: 494 year: 2014 ident: 4800_CR74 publication-title: Nature doi: 10.1038/nature13591 – volume: 186 start-page: 5147 year: 2004 ident: 4800_CR79 publication-title: J. Bacteriol. doi: 10.1128/JB.186.15.5147-5152.2004 – volume: 1 start-page: 285 year: 2015 ident: 4800_CR22 publication-title: Mediev. Globe doi: 10.17302/TMG.1-1.11 – volume: 110 start-page: 15758 year: 2013 ident: 4800_CR53 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1314445110 – volume: 18 start-page: 321 year: 2017 ident: 4800_CR31 publication-title: Annu. Rev. Genom. Hum. Genet. doi: 10.1146/annurev-genom-091416-035526 – volume: 25 start-page: 2078 year: 2009 ident: 4800_CR63 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btp352 – ident: 4800_CR8 – volume: 26 start-page: 1463 year: 2010 ident: 4800_CR82 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btq166 – volume: 27 start-page: 3683 year: 2017 ident: 4800_CR66 publication-title: Curr. Biol. doi: 10.1016/j.cub.2017.10.025 – volume: 33 start-page: 2911 year: 2016 ident: 4800_CR76 publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msw170 – volume: 28 start-page: 1395 year: 2018 ident: 4800_CR50 publication-title: Genome Res. doi: 10.1101/gr.232397.117 – volume: 369 start-page: eaaw8977 year: 2020 ident: 4800_CR89 publication-title: Science doi: 10.1126/science.aaw8977 – ident: 4800_CR5 – volume: 20 start-page: 323 year: 2019 ident: 4800_CR41 publication-title: Nat. Rev. Genet. doi: 10.1038/s41576-019-0119-1 – volume: 5 start-page: e00847- year: 2017 ident: 4800_CR77 publication-title: Genome Announc. doi: 10.1128/genomeA.00847-17 – volume: 17 year: 2016 ident: 4800_CR70 publication-title: Genome Biol. doi: 10.1186/s13059-016-0918-z – ident: 4800_CR45 – volume: 374 start-page: 182 year: 2021 ident: 4800_CR91 publication-title: Science doi: 10.1126/science.abi5658 – volume: 557 start-page: 369 year: 2018 ident: 4800_CR39 publication-title: Nature doi: 10.1038/s41586-018-0094-2 – volume: 33 start-page: 1870 year: 2016 ident: 4800_CR86 publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msw054 – volume: 53 start-page: 1 year: 2013 ident: 4800_CR85 publication-title: J. Stat. Softw. doi: 10.18637/jss.v053.i09 – volume: 12 start-page: e0187230 year: 2017 ident: 4800_CR18 publication-title: PLoS ONE doi: 10.1371/journal.pone.0187230 – ident: 4800_CR51 – volume: 96 start-page: 97 year: 2021 ident: 4800_CR47 publication-title: Speculum doi: 10.1086/711596 – volume: 9 year: 2018 ident: 4800_CR34 publication-title: Nat. Commun. doi: 10.1038/s41467-018-04550-9 – volume: 11 start-page: 289 year: 2007 ident: 4800_CR15 publication-title: Eur. Rev. Econ. Hist. doi: 10.1017/S1361491607002031 – volume: 35 start-page: 109278 year: 2021 ident: 4800_CR38 publication-title: Cell Rep. doi: 10.1016/j.celrep.2021.109278 – volume: 1 start-page: e311 year: 2020 ident: 4800_CR33 publication-title: Lancet Microbe doi: 10.1016/S2666-5247(20)30176-2 – volume: 2 start-page: 520 year: 2018 ident: 4800_CR62 publication-title: Nat. Ecol. Evol. doi: 10.1038/s41559-017-0446-6 – volume: 10 start-page: 4470 year: 2019 ident: 4800_CR17 publication-title: Nat. Commun. doi: 10.1038/s41467-019-12154-0 – volume: 112 start-page: 3020 year: 2015 ident: 4800_CR46 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1412887112 – volume: 20 start-page: 280 year: 2019 ident: 4800_CR29 publication-title: Genome Biol. doi: 10.1186/s13059-019-1903-0 – volume: 15 start-page: e1006650 year: 2019 ident: 4800_CR87 publication-title: PLoS Comput. Biol. doi: 10.1371/journal.pcbi.1006650 – volume: 110 start-page: 577 year: 2013 ident: 4800_CR16 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1205750110 – volume: 50 start-page: 59 year: 2019 ident: 4800_CR9 publication-title: J. Interdiscip. Hist. doi: 10.1162/jinh_a_01376 – volume: 5 start-page: e12994 year: 2016 ident: 4800_CR32 publication-title: eLife doi: 10.7554/eLife.12994 – ident: 4800_CR27 – volume: 30 start-page: 1312 year: 2014 ident: 4800_CR81 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btu033 – volume: 16 start-page: 820 year: 2021 ident: 4800_CR97 publication-title: Integr. Zool. doi: 10.1111/1749-4877.12511 – ident: 4800_CR3 – ident: 4800_CR23 doi: 10.4000/afriques.2228 – volume: 108 start-page: E746 year: 2011 ident: 4800_CR71 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1105107108 – volume: 4 start-page: vex042 year: 2018 ident: 4800_CR35 publication-title: Virus Evol. doi: 10.1093/ve/vex042 – volume: 370 start-page: 20130624 year: 2015 ident: 4800_CR56 publication-title: Philos. Trans. R. Soc. Lond. B doi: 10.1098/rstb.2013.0624 – volume: 6 start-page: e01440- year: 2018 ident: 4800_CR78 publication-title: Genome Announc. – volume: 117 start-page: 28328 year: 2020 ident: 4800_CR20 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.2009677117 – volume: 115 start-page: 1304 year: 2018 ident: 4800_CR98 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1715640115 – volume: 522 start-page: 207 year: 2015 ident: 4800_CR69 publication-title: Nature doi: 10.1038/nature14317 – volume: 61 start-page: 1 year: 1992 ident: 4800_CR83 publication-title: Biol. Conserv. doi: 10.1016/0006-3207(92)91201-3 – volume: 30 start-page: 111 year: 2008 ident: 4800_CR96 publication-title: Age (Dordr.) doi: 10.1007/s11357-008-9053-4 – volume: 115 start-page: E11790 year: 2018 ident: 4800_CR21 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1812865115 – volume: 10 start-page: 9499 year: 2020 ident: 4800_CR90 publication-title: Sci. Rep. doi: 10.1038/s41598-020-66012-x – volume: 37 start-page: 3363 year: 2020 ident: 4800_CR101 publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msaa163 – volume: 2 start-page: vew007 year: 2016 ident: 4800_CR100 publication-title: Virus Evol. doi: 10.1093/ve/vew007 – volume: 9 year: 2016 ident: 4800_CR60 publication-title: BMC Res. Notes doi: 10.1186/s13104-016-1900-2 – ident: 4800_CR57 doi: 10.17504/protocols.io.bmh6k39e – volume: 22 start-page: 1185 year: 2005 ident: 4800_CR88 publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msi103 – ident: 4800_CR7 doi: 10.1017/CBO9781139031110 – volume: 29 start-page: 1682 year: 2013 ident: 4800_CR64 publication-title: Bioinformatics doi: 10.1093/bioinformatics/btt193 – ident: 4800_CR1 – volume: 44 start-page: D733 year: 2016 ident: 4800_CR61 publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkv1189 – volume: 15 start-page: 2279 year: 2020 ident: 4800_CR65 publication-title: Nat. Protoc. doi: 10.1038/s41596-020-0338-0 – ident: 4800_CR52 doi: 10.17504/protocols.io.bqebmtan – volume: 30 start-page: 138 year: 2020 ident: 4800_CR37 publication-title: Genome Res. doi: 10.1101/gr.251678.119 – ident: 4800_CR59 doi: 10.17504/protocols.io.bakticwn – volume: 17 start-page: 434 year: 2004 ident: 4800_CR40 publication-title: Clin. Microbiol. Rev. doi: 10.1128/CMR.17.2.434-464.2004 – volume: 11 start-page: 56 year: 2018 ident: 4800_CR24 publication-title: J. Persianate Stud. doi: 10.1163/18747167-12341321 – ident: 4800_CR12 doi: 10.2307/j.ctvxhrjg8 – volume: 37 start-page: e2015050 year: 2015 ident: 4800_CR44 publication-title: Epidemiol. Health doi: 10.4178/epih/e2015050 – volume: 125 start-page: 1601 year: 2020 ident: 4800_CR26 publication-title: Am. Hist. Rev. doi: 10.1093/ahr/rhaa511 – ident: 4800_CR49 – volume: 110 start-page: 2223 year: 2013 ident: 4800_CR68 publication-title: Proc. Natl Acad. Sci. USA doi: 10.1073/pnas.1221359110 – volume: 524 start-page: 216 year: 2015 ident: 4800_CR28 publication-title: Nature doi: 10.1038/nature14558 – ident: 4800_CR11 doi: 10.1017/CBO9781139004046 – volume: 9 start-page: 772 year: 2012 ident: 4800_CR95 publication-title: Nat. Methods doi: 10.1038/nmeth.2109 – ident: 4800_CR6 – reference: 35778565 - Nat Rev Microbiol. 2022 Sep;20(9):509. doi: 10.1038/s41579-022-00769-y. – reference: 35705867 - Nature. 2022 Jun;606(7915):635-636. doi: 10.1038/d41586-022-01673-4. |
SSID | ssj0005174 |
Score | 2.6203086 |
Snippet | The origin of the medieval Black Death pandemic (
ad
1346–1353) has been a topic of continuous investigation because of the pandemic’s extensive demographic... The origin of the medieval Black Death pandemic (AD 1346-1353) has been a topic of continuous investigation because of the pandemic's extensive demographic... The origin of the medieval Black Death pandemic (ad 1346-1353) has been a topic of continuous investigation because of the pandemic's extensive demographic... |
SourceID | pubmedcentral hal proquest pubmed crossref springer |
SourceType | Open Access Repository Aggregation Database Index Database Enrichment Source Publisher |
StartPage | 718 |
SubjectTerms | 14th century 45 45/47 631/181/2474 631/181/27 631/326/421 Archaeology Archives & records Bubonic plague Cemeteries Death DNA, Ancient - analysis DNA, Bacterial - analysis Epidemics Genomes History, Medieval Humanities and Social Sciences Humans Infectious diseases Inscriptions Kyrgyzstan - epidemiology Life Sciences Mortality multidisciplinary Pandemics Pandemics - history Pathogens Phylogeny Plague - epidemiology Plague - history Plague - microbiology Plasmids Science Science (multidisciplinary) Tombstones Yersinia pestis - classification Yersinia pestis - pathogenicity |
SummonAdditionalLinks | – databaseName: Health & Medical Collection dbid: 7X7 link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1La9wwEB6alEIvJY8-3CZFLTm0tCJrybbkUwhpwlKanBrYm5BliQ0Ubxrv9vd3RtbusgmJj5aM9ZiRvpn5NAI4QkyuAtEGfRtaXsjguA225bVsrHIIoIvo0728qsbXxc9JOUkOtz7RKpdrYlyo25kjH_mxqDSlh0LxObn9y-nWKIqupis0tuA5pS4jSpeaqDXF414W5nRoZiT1cY8blyb6reB0qhrXoo2NaWtKtMiHmPMhdfJe_DRuSxc78CrhSXY6CMAuPPPdHryIvE7X78Fu0t2efUkJpr_uwxnKBhu89mwWGEJAFv147AfhQXbTsYCFc-JYTLkbdiWWmsLOF3d08PI1XF-c_z4b83SZAneIweZcOFTfgGirqevQCmXRNHClCLqkxESyDjo4hErW2VGDT9HWLS6UyqL5ZstQ5_INbHezzr8DFrysWl9qiioW3gZNKK0JvlIIP50QGeTLkTQuZRqnCy_-mBjxltoMo29w9E0cfSMz-Lb65nbIs_Fk7c84QauKlCJ7fPrL0DvsVk4Ww788g4Pl_JmkmL1Zi1EGn1bFqFIUJ7Gdny2ojlKlQlOyyuDtMN2rX8lSjUqdjzJQG4Kw0ZbNku5mGtN212j9qaLO4PtSZNbNeryr75_uxQd4KaIQV1zIA9ie3y38IcKkefMx6sJ_bwwLSg priority: 102 providerName: ProQuest |
Title | The source of the Black Death in fourteenth-century central Eurasia |
URI | https://link.springer.com/article/10.1038/s41586-022-04800-3 https://www.ncbi.nlm.nih.gov/pubmed/35705810 https://www.proquest.com/docview/2680630794 https://www.proquest.com/docview/2677572876 https://hal.science/hal-04917729 https://pubmed.ncbi.nlm.nih.gov/PMC9217749 |
Volume | 606 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV3Pb9MwFH5aNyFxQWz8yjYqgziAwFpjJ7Fz3EJLhWBCiEm9RY5jq5NQitZ2f__ec5JO3QYSOeQQO4ljv2d_z_78BeAdYnLliTboal_zRHrLjTc1z2VllEUAnYQ53e_n2fQi-TpLZzsg-r0wgbQfJC1DN92zw06WONBoossKTrugse8YwB5Jt5NVF1lxS-u4o7zcbZQZSf3AM7YGo8GcqJD3ceZ9uuSdNdMwFE2ewpMOQ7LTttT7sOOaA3gUuJx2eQD7nb8u2ftOVPrDMyjQHlg7U88WniHsY2Hujn0mDMguG-YxcUW8ijm37UjEuqKw8fqKNls-h4vJ-Fcx5d0PFLhF3LXiwqLLekRYVZ77WiiD4YBNhdcpiRHJ3GtvER4Za0YVHkmd19g5KoMhm0l9HssXsNssGvcKmHcyq12qaSUxccZrQmaVd5lCyGmFiCDua7K0nbo4_eTidxlWuaUu29ovsfbLUPuljODj5p4_rbbGP3O_xQbaZCRZ7Onpt5Ku4WfFFCVcxxEc9-1Xds64LEWmSVkMe54I3myS0Y1obcQ0brGmPEqlCsPHLIKXbXNvXiVTNUp1PIpAbRnCVlm2U5rLeZDqzjHiU0kewafeZG6L9fdPPfy_7EfwWASjzriQx7C7ulq71wiVVtUQBmqm8KyLmM6TL0PYOxuf__g5DF5zA3-qDS4 |
linkProvider | Springer Nature |
linkToHtml | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwEB61RQguiJZXoIBBIIHAamIncXJAqOpDW7rtqZX2Zhwn1laqsm2zC-JP8RuZcZJdbSt66x5jJ2uPxzPfeB4G-ICYXDkKG6xKV_JYOsuNMyXPZWGURQAd-zPdo-N0cBr_GCWjFfjb58JQWGUvE72gLieWzsi3RJpReShkn-8Xl5xujSLvan-FRssWh9Wf32iyNd8OdnF9Pwqxv3eyM-DdrQLcIhiZcmGRjx3CjiLPXSmUQYxsE-GyhCr0yNxlziJmMNaEBf7iMi9RYiiDdoxJXB5J_O4q3EPFG9KOUiO1CCm5VvW5S9IJZbbVoKLMKNxXcMriRtm3pAhXxxSGeRPj3gzVvOav9Wpw_zE86vAr224Zbh1WqnoD7vs4UttswHonKxr2qSto_fkJ7CAvstZLwCaOIeRk_tyQ7RL-ZGc1c9g4pZiOMbetFmTdUNje7IoSPZ_C6Z2Q-Rms1ZO6egHMVTItqyQjL2ZcGZcRKixclSqEu1aIAKKektp2lc3pgo1z7T3sMtMt9TVSX3vqaxnAl_k7F21dj1t7v8cFmnekktyD7aGmZzitiCyUX1EAm_366U4QNHrBtgG8mzfjFia_jKmryYz6KJUoNF3TAJ63yz3_K5moMMmiMAC1xAhLY1luqc_Gvkx4jtamivMAvvYssxjW_6f68vZZvIUHg5OjoR4eHB--gofCM3TKhdyEtenVrHqNEG1avPH7gsHPu96I_wBlbUh7 |
linkToPdf | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV3db9MwED9tQ6C9IDa-AgMMAgkEURs7iZMHhKZ1VcfGxAOT-uY5jq1OmtKxtCD-Nf467pykVText_UxdlL7fHf-ne_DAG8Rk0tHYYO2dGUYC2dC7XQZ5qLQ0iCAjv2Z7rfjdHQSfx0n4zX42-XCUFhlpxO9oi6nhs7IezzNqDwUsk_PtWER3wfDLxc_Q7pBijyt3XUaDYsc2j-_0XyrPx8McK3fcT7c_7E3CtsbBkKDwGQWcoM87RCCFHnuSi414mWTcJclVK1H5C5zBvGDNrpf4C8u8xK1h9Ro0-jE5ZHA767DHSmSiGRMjuUyvORKBeg2Yacvsl6Nm2ZGob88pIxu1IMrm-L6hEIyr-Pd62GbV3y3fkscPoD7LZZluw3zbcGarbbhro8pNfU2bLV6o2bv2-LWHx7CHvIlazwGbOoYwk_mzxDZgLAoO6uYw8YZxXdMQtPsiKwdCtufX1LS5yM4uRUyP4aNalrZp8CcFWlpk4w8mrHVLiOEWDibSoS-hvMAoo6SyrRVzumyjXPlve0iUw31FVJfeeorEcDHxTsXTY2PG3u_wQVadKTy3KPdI0XPcFoRWSu_ogB2uvVTrVKo1ZKFA3i9aEZxJh-Nrux0Tn2kTCSasWkAT5rlXvyVSGQ_yaJ-AHKFEVbGstpSnU18yfAcLU8Z5wF86lhmOaz_T_XZzbN4BfdQBNXRwfHhc9jknp_TkIsd2Jhdzu0LRGuz4qUXCwanty2H_wD5OEyx |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=The+source+of+the+Black+Death+in+fourteenth-century+central+Eurasia&rft.jtitle=Nature+%28London%29&rft.au=Spyrou%2C+Maria+A.&rft.au=Musralina%2C+Lyazzat&rft.au=Gnecchi+Ruscone%2C+Guido+A.&rft.au=Kocher%2C+Arthur&rft.date=2022-06-23&rft.issn=0028-0836&rft.eissn=1476-4687&rft.volume=606&rft.issue=7915&rft.spage=718&rft.epage=724&rft_id=info:doi/10.1038%2Fs41586-022-04800-3&rft.externalDBID=n%2Fa&rft.externalDocID=10_1038_s41586_022_04800_3 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0028-0836&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0028-0836&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0028-0836&client=summon |