Global profiling of co- and post-translationally N-myristoylated proteomes in human cells
Protein N -myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of human diseases. Here, we report the global N -myristoylated proteome in human cells determined using quantitative chemical proteomics combined w...
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Published in | Nature communications Vol. 5; no. 1; p. 4919 |
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Main Authors | , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
London
Nature Publishing Group UK
26.09.2014
Nature Publishing Group Nature Pub. Group |
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Abstract | Protein
N
-myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of human diseases. Here, we report the global
N
-myristoylated proteome in human cells determined using quantitative chemical proteomics combined with potent and specific human
N
-myristoyltransferase (NMT) inhibition. Global quantification of
N
-myristoylation during normal growth or apoptosis allowed the identification of >100
N
-myristoylated proteins, >95% of which are identified for the first time at endogenous levels. Furthermore, quantitative dose response for inhibition of
N
-myristoylation is determined for >70 substrates simultaneously across the proteome. Small-molecule inhibition through a conserved substrate-binding pocket is also demonstrated by solving the crystal structures of inhibitor-bound NMT1 and NMT2. The presented data substantially expand the known repertoire of co- and post-translational
N
-myristoylation in addition to validating tools for the pharmacological inhibition of NMT in living cells.
Protein
N
-myristoylation is a ubiquitous modification implicated in the regulation of multiple cellular processes. Here, Thinon
et al.
report the development of a general method to identify
N
-myristoylated proteins in human cells and identify over 100 endogenous post- and co-translational substrates of
N
-myristoyltransferase. |
---|---|
AbstractList | Protein
N
-myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of human diseases. Here, we report the global
N
-myristoylated proteome in human cells determined using quantitative chemical proteomics combined with potent and specific human
N
-myristoyltransferase (NMT) inhibition. Global quantification of
N
-myristoylation during normal growth or apoptosis allowed the identification of >100
N
-myristoylated proteins, >95% of which are identified for the first time at endogenous levels. Furthermore, quantitative dose response for inhibition of
N
-myristoylation is determined for >70 substrates simultaneously across the proteome. Small-molecule inhibition through a conserved substrate-binding pocket is also demonstrated by solving the crystal structures of inhibitor-bound NMT1 and NMT2. The presented data substantially expand the known repertoire of co- and post-translational
N
-myristoylation in addition to validating tools for the pharmacological inhibition of NMT in living cells.
Protein
N
-myristoylation is a ubiquitous modification implicated in the regulation of multiple cellular processes. Here, Thinon
et al.
report the development of a general method to identify
N
-myristoylated proteins in human cells and identify over 100 endogenous post- and co-translational substrates of
N
-myristoyltransferase. Protein N-myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of human diseases. Here, we report the global N-myristoylated proteome in human cells determined using quantitative chemical proteomics combined with potent and specific human N-myristoyltransferase (NMT) inhibition. Global quantification of N-myristoylation during normal growth or apoptosis allowed the identification of >100 N-myristoylated proteins, >95% of which are identified for the first time at endogenous levels. Furthermore, quantitative dose response for inhibition of N-myristoylation is determined for >70 substrates simultaneously across the proteome. Small-molecule inhibition through a conserved substrate-binding pocket is also demonstrated by solving the crystal structures of inhibitor-bound NMT1 and NMT2. The presented data substantially expand the known repertoire of co- and post-translational N-myristoylation in addition to validating tools for the pharmacological inhibition of NMT in living cells. Abstract Protein N -myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of human diseases. Here, we report the global N -myristoylated proteome in human cells determined using quantitative chemical proteomics combined with potent and specific human N -myristoyltransferase (NMT) inhibition. Global quantification of N -myristoylation during normal growth or apoptosis allowed the identification of >100 N -myristoylated proteins, >95% of which are identified for the first time at endogenous levels. Furthermore, quantitative dose response for inhibition of N -myristoylation is determined for >70 substrates simultaneously across the proteome. Small-molecule inhibition through a conserved substrate-binding pocket is also demonstrated by solving the crystal structures of inhibitor-bound NMT1 and NMT2. The presented data substantially expand the known repertoire of co- and post-translational N -myristoylation in addition to validating tools for the pharmacological inhibition of NMT in living cells. |
ArticleNumber | 4919 |
Author | Broncel, Malgorzata Serwa, Remigiusz A. Heal, William P. Brannigan, James A. Mann, David J. Brassat, Ute Tate, Edward W. Thinon, Emmanuelle Wright, Megan H. Wilkinson, Anthony J. |
Author_xml | – sequence: 1 givenname: Emmanuelle surname: Thinon fullname: Thinon, Emmanuelle organization: Department of Chemistry, Imperial College London, Department of Life Sciences, Imperial College London, Present address: The Rockefeller University, 1230 York Avenue, New York, New York, USA – sequence: 2 givenname: Remigiusz A. surname: Serwa fullname: Serwa, Remigiusz A. organization: Department of Chemistry, Imperial College London – sequence: 3 givenname: Malgorzata surname: Broncel fullname: Broncel, Malgorzata organization: Department of Chemistry, Imperial College London – sequence: 4 givenname: James A. surname: Brannigan fullname: Brannigan, James A. organization: Department of Chemistry, York Structural Biology Laboratory, University of York – sequence: 5 givenname: Ute surname: Brassat fullname: Brassat, Ute organization: Department of Chemistry, Imperial College London, Department of Life Sciences, Imperial College London, Present address: EUFETS GmbH, Vollmersbachstrasse 66, 55743 Idar-Oberstein, Germany – sequence: 6 givenname: Megan H. surname: Wright fullname: Wright, Megan H. organization: Department of Chemistry, Imperial College London, Department of Chemistry, Institute of Chemical Biology, Imperial College London, Present address: Department of Chemistry, TU München, Lichtenbergstrasse 4, D-85748 Garching, Germany – sequence: 7 givenname: William P. surname: Heal fullname: Heal, William P. organization: Department of Chemistry, Imperial College London, Present address: Department of Chemistry, Kings College London, London SE1 1UL, UK – sequence: 8 givenname: Anthony J. surname: Wilkinson fullname: Wilkinson, Anthony J. organization: Department of Chemistry, York Structural Biology Laboratory, University of York – sequence: 9 givenname: David J. surname: Mann fullname: Mann, David J. organization: Department of Life Sciences, Imperial College London, Department of Chemistry, Institute of Chemical Biology, Imperial College London – sequence: 10 givenname: Edward W. surname: Tate fullname: Tate, Edward W. email: e.tate@imperial.ac.uk organization: Department of Chemistry, Imperial College London, Department of Chemistry, Institute of Chemical Biology, Imperial College London |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/25255805$$D View this record in MEDLINE/PubMed |
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Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 These authors contributed equally to this work Present address: Department of Chemistry, Kings College London, London SE1 1UL, UK Present address: EUFETS GmbH, Vollmersbachstrasse 66, 55743 Idar-Oberstein, Germany Present address: Department of Chemistry, TU München, Lichtenbergstrasse 4, D-85748 Garching, Germany Present address: The Rockefeller University, 1230 York Avenue, New York, New York, USA |
OpenAccessLink | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4200515/ |
PMID | 25255805 |
PQID | 1565496271 |
PQPubID | 546298 |
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PublicationCentury | 2000 |
PublicationDate | 9-26-2014 |
PublicationDateYYYYMMDD | 2014-09-26 |
PublicationDate_xml | – month: 09 year: 2014 text: 9-26-2014 day: 26 |
PublicationDecade | 2010 |
PublicationPlace | London |
PublicationPlace_xml | – name: London – name: England |
PublicationTitle | Nature communications |
PublicationTitleAbbrev | Nat Commun |
PublicationTitleAlternate | Nat Commun |
PublicationYear | 2014 |
Publisher | Nature Publishing Group UK Nature Publishing Group Nature Pub. Group |
Publisher_xml | – name: Nature Publishing Group UK – name: Nature Publishing Group – name: Nature Pub. Group |
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Snippet | Protein
N
-myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of... Protein N-myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of... Abstract Protein N -myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a... |
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SubjectTerms | 631/92/458 631/92/475 82/58 82/80 96/2 Acyltransferases - genetics Acyltransferases - metabolism Crystallography, X-Ray HeLa Cells Humanities and Social Sciences Humans multidisciplinary Myristic Acid - metabolism Protein Processing, Post-Translational Proteome - genetics Proteome - metabolism Science Science (multidisciplinary) |
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Title | Global profiling of co- and post-translationally N-myristoylated proteomes in human cells |
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