Trophic network architecture of root-associated bacterial communities determines pathogen invasion and plant health

Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical predictions suggest that species-rich communities are more resistant to pathogen invasions. Yet, the underlying mechanisms are unclear. Here,...

Full description

Saved in:
Bibliographic Details
Published inNature communications Vol. 6; no. 1; p. 8413
Main Authors Wei, Zhong, Yang, Tianjie, Friman, Ville-Petri, Xu, Yangchun, Shen, Qirong, Jousset, Alexandre
Format Journal Article
LanguageEnglish
Published London Nature Publishing Group UK 24.09.2015
Nature Publishing Group
Nature Pub. Group
Subjects
Online AccessGet full text

Cover

Loading…
Abstract Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical predictions suggest that species-rich communities are more resistant to pathogen invasions. Yet, the underlying mechanisms are unclear. Here, we experimentally test how the underlying resource competition networks of resident bacterial communities affect invasion resistance to the plant pathogen Ralstonia solanacearum in microcosms and in tomato plant rhizosphere. We find that bipartite resource competition networks are better predictors of invasion resistance compared with resident community diversity. Specifically, communities with a combination of stabilizing configurations (low nestedness and high connectance), and a clear niche overlap with the pathogen, reduce pathogen invasion success, constrain pathogen growth within invaded communities and have lower levels of diseased plants in greenhouse experiments. Bacterial resource competition network characteristics can thus be important in explaining positive diversity–invasion resistance relationships in bacterial rhizosphere communities. Species-rich communities are thought to be more resistant to pathogen invasion. Here, Wei et al. show that the resource competition network architecture of root-associated bacterial communities are better predictors of plant pathogen invasion resistance than measures of community diversity.
AbstractList Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical predictions suggest that species-rich communities are more resistant to pathogen invasions. Yet, the underlying mechanisms are unclear. Here, we experimentally test how the underlying resource competition networks of resident bacterial communities affect invasion resistance to the plant pathogen Ralstonia solanacearum in microcosms and in tomato plant rhizosphere. We find that bipartite resource competition networks are better predictors of invasion resistance compared with resident community diversity. Specifically, communities with a combination of stabilizing configurations (low nestedness and high connectance), and a clear niche overlap with the pathogen, reduce pathogen invasion success, constrain pathogen growth within invaded communities and have lower levels of diseased plants in greenhouse experiments. Bacterial resource competition network characteristics can thus be important in explaining positive diversity-invasion resistance relationships in bacterial rhizosphere communities.
Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical predictions suggest that species-rich communities are more resistant to pathogen invasions. Yet, the underlying mechanisms are unclear. Here, we experimentally test how the underlying resource competition networks of resident bacterial communities affect invasion resistance to the plant pathogen Ralstonia solanacearum in microcosms and in tomato plant rhizosphere. We find that bipartite resource competition networks are better predictors of invasion resistance compared with resident community diversity. Specifically, communities with a combination of stabilizing configurations (low nestedness and high connectance), and a clear niche overlap with the pathogen, reduce pathogen invasion success, constrain pathogen growth within invaded communities and have lower levels of diseased plants in greenhouse experiments. Bacterial resource competition network characteristics can thus be important in explaining positive diversity–invasion resistance relationships in bacterial rhizosphere communities. Species-rich communities are thought to be more resistant to pathogen invasion. Here, Wei et al. show that the resource competition network architecture of root-associated bacterial communities are better predictors of plant pathogen invasion resistance than measures of community diversity.
Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical predictions suggest that species-rich communities are more resistant to pathogen invasions. Yet, the underlying mechanisms are unclear. Here, we experimentally test how the underlying resource competition networks of resident bacterial communities affect invasion resistance to the plant pathogen Ralstonia solanacearum in microcosms and in tomato plant rhizosphere. We find that bipartite resource competition networks are better predictors of invasion resistance compared with resident community diversity. Specifically, communities with a combination of stabilizing configurations (low nestedness and high connectance), and a clear niche overlap with the pathogen, reduce pathogen invasion success, constrain pathogen growth within invaded communities and have lower levels of diseased plants in greenhouse experiments. Bacterial resource competition network characteristics can thus be important in explaining positive diversity–invasion resistance relationships in bacterial rhizosphere communities.
Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical predictions suggest that species-rich communities are more resistant to pathogen invasions. Yet, the underlying mechanisms are unclear. Here, we experimentally test how the underlying resource competition networks of resident bacterial communities affect invasion resistance to the plant pathogen Ralstonia solanacearum in microcosms and in tomato plant rhizosphere. We find that bipartite resource competition networks are better predictors of invasion resistance compared with resident community diversity. Specifically, communities with a combination of stabilizing configurations (low nestedness and high connectance), and a clear niche overlap with the pathogen, reduce pathogen invasion success, constrain pathogen growth within invaded communities and have lower levels of diseased plants in greenhouse experiments. Bacterial resource competition network characteristics can thus be important in explaining positive diversity-invasion resistance relationships in bacterial rhizosphere communities.Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical predictions suggest that species-rich communities are more resistant to pathogen invasions. Yet, the underlying mechanisms are unclear. Here, we experimentally test how the underlying resource competition networks of resident bacterial communities affect invasion resistance to the plant pathogen Ralstonia solanacearum in microcosms and in tomato plant rhizosphere. We find that bipartite resource competition networks are better predictors of invasion resistance compared with resident community diversity. Specifically, communities with a combination of stabilizing configurations (low nestedness and high connectance), and a clear niche overlap with the pathogen, reduce pathogen invasion success, constrain pathogen growth within invaded communities and have lower levels of diseased plants in greenhouse experiments. Bacterial resource competition network characteristics can thus be important in explaining positive diversity-invasion resistance relationships in bacterial rhizosphere communities.
ArticleNumber 8413
Author Wei, Zhong
Xu, Yangchun
Jousset, Alexandre
Shen, Qirong
Friman, Ville-Petri
Yang, Tianjie
Author_xml – sequence: 1
  givenname: Zhong
  surname: Wei
  fullname: Wei, Zhong
  organization: Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China
– sequence: 2
  givenname: Tianjie
  surname: Yang
  fullname: Yang, Tianjie
  organization: Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China
– sequence: 3
  givenname: Ville-Petri
  surname: Friman
  fullname: Friman, Ville-Petri
  organization: Imperial College London, Silwood Park Campus, Department of Biology, University of York, Wentworth Way
– sequence: 4
  givenname: Yangchun
  surname: Xu
  fullname: Xu, Yangchun
  organization: Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China
– sequence: 5
  givenname: Qirong
  surname: Shen
  fullname: Shen, Qirong
  email: shenqirong@njau.edu.cn
  organization: Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China
– sequence: 6
  givenname: Alexandre
  surname: Jousset
  fullname: Jousset, Alexandre
  email: A.L.C.Jousset@uu.nl
  organization: Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China, Institute for Environmental Biology, Ecology & Biodiversity, Utrecht University, Padualaan 8, 3584CH Utrecht, The Netherlands
BackLink https://www.ncbi.nlm.nih.gov/pubmed/26400552$$D View this record in MEDLINE/PubMed
BookMark eNptkcFu1DAQhi1UREvphQdAlrggqhQ7sWPngoQqKEiVeinnaOJMNi6JHWyniLfHq23LUuqLR-Nvfv8z85IcOO-QkNecnXFW6Q_O-HmOjeDVM3JUMsELrsrqYC8-JCcx3rB8qoZrIV6Qw7IWjElZHpF4HfwyWkMdpl8-_KAQzGgTmrQGpH6gwftUQIzeWEjY0w5MwmBhotuPV2eTxUh7zMnZuhwukEa_QUetu4VovaPgerpM4BIdEaY0viLPB5gintzdx-T7l8_X51-Ly6uLb-efLgsjmU4FR-jk0GmBg8gJCTioplQMYRBQ9qg55xJLrDspKxgqHDqsVK36pgZtNFTH5ONOd1m7GXuDLgWY2iXYGcLv1oNt_31xdmw3_rYVstGqbLLAuzuB4H-uGFM722hwyr2gX2PLFVdCCc1lRt8-Qm_8Glxub0vJPPi6YZl6s-_owcr9PjLwfgeY4GMMODwgnLXbfbd_951h9gg2NkHKI8_d2OnpktNdScy6boNhz-b_9B9Mw8Gv
CitedBy_id crossref_primary_10_1016_j_soilbio_2017_03_013
crossref_primary_10_1016_j_soilbio_2017_11_012
crossref_primary_10_1093_femsec_fiaa226
crossref_primary_10_1111_nph_18793
crossref_primary_10_1038_s41893_018_0201_2
crossref_primary_10_1186_s12864_016_2561_1
crossref_primary_10_1016_j_jclepro_2021_129375
crossref_primary_10_3390_microorganisms8030443
crossref_primary_10_1016_j_apsoil_2021_104300
crossref_primary_10_1007_s42729_019_00109_9
crossref_primary_10_1093_femsec_fiaa211
crossref_primary_10_1038_s41467_022_35452_6
crossref_primary_10_1186_s12870_020_02365_9
crossref_primary_10_3390_antibiotics11081117
crossref_primary_10_1128_aem_02287_23
crossref_primary_10_3389_fmicb_2024_1426893
crossref_primary_10_1073_pnas_1616148114
crossref_primary_10_1038_s41598_024_76195_2
crossref_primary_10_3390_jof7030175
crossref_primary_10_1007_s00253_020_10812_8
crossref_primary_10_1016_j_tim_2019_11_006
crossref_primary_10_1016_j_mib_2025_102596
crossref_primary_10_3390_agronomy13082143
crossref_primary_10_1093_femsec_fiz105
crossref_primary_10_1111_1751_7915_14142
crossref_primary_10_1111_1758_2229_12934
crossref_primary_10_3390_ijms242216118
crossref_primary_10_1016_j_tim_2025_01_006
crossref_primary_10_1111_ele_13177
crossref_primary_10_1016_j_soilbio_2022_108599
crossref_primary_10_1038_s41559_021_01593_y
crossref_primary_10_3389_fpls_2017_02241
crossref_primary_10_1016_j_molp_2023_08_004
crossref_primary_10_1186_s40538_024_00616_7
crossref_primary_10_1016_j_isci_2024_110319
crossref_primary_10_1146_annurev_ecolsys_110617_062605
crossref_primary_10_1016_j_ijfoodmicro_2021_109070
crossref_primary_10_3389_fmicb_2020_01490
crossref_primary_10_1038_s41522_023_00416_1
crossref_primary_10_3389_fmicb_2023_1200023
crossref_primary_10_1038_s41467_018_05683_7
crossref_primary_10_1016_j_apsoil_2024_105598
crossref_primary_10_1038_ismej_2017_158
crossref_primary_10_3389_fmicb_2019_02535
crossref_primary_10_3389_fsufs_2021_624203
crossref_primary_10_3389_fmicb_2018_03087
crossref_primary_10_1016_j_cell_2024_04_016
crossref_primary_10_3897_neobiota_85_97269
crossref_primary_10_1098_rspb_2021_1396
crossref_primary_10_1007_s00425_024_04338_w
crossref_primary_10_1007_s42832_023_0223_1
crossref_primary_10_1111_1462_2920_15097
crossref_primary_10_1016_j_scitotenv_2022_160986
crossref_primary_10_1111_1462_2920_16184
crossref_primary_10_1111_ele_13271
crossref_primary_10_1111_gcbb_12906
crossref_primary_10_1016_j_still_2019_104368
crossref_primary_10_1038_s41598_018_24537_2
crossref_primary_10_1094_MPMI_34_6
crossref_primary_10_1111_tpj_14781
crossref_primary_10_1007_s10327_024_01204_1
crossref_primary_10_1016_j_heliyon_2024_e36548
crossref_primary_10_7554_eLife_90726
crossref_primary_10_1111_nph_18221
crossref_primary_10_1007_s10658_023_02779_9
crossref_primary_10_1016_j_soilbio_2020_107874
crossref_primary_10_1111_1462_2920_16194
crossref_primary_10_1111_1365_2435_13292
crossref_primary_10_1111_nph_18582
crossref_primary_10_3390_microorganisms9020357
crossref_primary_10_1007_s11274_022_03347_9
crossref_primary_10_1016_j_apsoil_2017_08_002
crossref_primary_10_1186_s40168_018_0445_0
crossref_primary_10_1002_ldr_5300
crossref_primary_10_1016_j_agee_2021_107534
crossref_primary_10_1007_s00248_022_02028_2
crossref_primary_10_1038_s41598_020_79320_z
crossref_primary_10_1007_s11104_019_04055_4
crossref_primary_10_1111_1365_2664_12873
crossref_primary_10_1002_ecs2_4029
crossref_primary_10_1016_j_envres_2023_116827
crossref_primary_10_3389_fmicb_2022_910390
crossref_primary_10_15302_J_FASE_2020346
crossref_primary_10_1038_s41598_021_85281_8
crossref_primary_10_3390_microorganisms11122864
crossref_primary_10_1186_s13568_022_01455_1
crossref_primary_10_1080_23746149_2022_2153624
crossref_primary_10_1128_msystems_00811_19
crossref_primary_10_1111_tpj_13429
crossref_primary_10_1016_j_micres_2022_127015
crossref_primary_10_1038_s41579_022_00779_w
crossref_primary_10_1128_spectrum_01226_22
crossref_primary_10_1007_s00253_021_11666_4
crossref_primary_10_1111_1462_2920_15086
crossref_primary_10_3389_fmicb_2018_00728
crossref_primary_10_3389_fmicb_2021_796191
crossref_primary_10_3389_fmicb_2016_01971
crossref_primary_10_1093_hr_uhae186
crossref_primary_10_3390_plants13030364
crossref_primary_10_3389_fmicb_2022_981987
crossref_primary_10_3390_microorganisms10112171
crossref_primary_10_1002_adbi_202101088
crossref_primary_10_1080_07352689_2020_1757829
crossref_primary_10_1038_s41396_019_0407_y
crossref_primary_10_1038_s41396_018_0283_x
crossref_primary_10_1007_s13199_021_00791_3
crossref_primary_10_1002_imt2_18
crossref_primary_10_1038_s41396_021_01126_2
crossref_primary_10_1016_j_micres_2023_127597
crossref_primary_10_1007_s42994_024_00181_5
crossref_primary_10_1007_s42832_022_0142_6
crossref_primary_10_3389_fpls_2019_01741
crossref_primary_10_1016_j_envpol_2019_06_019
crossref_primary_10_1016_j_scienta_2017_01_047
crossref_primary_10_1016_j_cub_2018_05_085
crossref_primary_10_1128_mSystems_00803_19
crossref_primary_10_1371_journal_pone_0223616
crossref_primary_10_3389_fmicb_2022_853077
crossref_primary_10_1007_s42832_021_0086_2
crossref_primary_10_1128_mBio_01790_16
crossref_primary_10_1016_j_scitotenv_2022_155102
crossref_primary_10_1016_j_apsoil_2024_105658
crossref_primary_10_1007_s40725_023_00188_z
crossref_primary_10_1094_PBIOMES_3_3
crossref_primary_10_3390_plants13202885
crossref_primary_10_1007_s00425_023_04074_7
crossref_primary_10_1186_s12866_023_02965_z
crossref_primary_10_3389_fmicb_2024_1450226
crossref_primary_10_1038_s41396_023_01459_0
crossref_primary_10_1016_j_jclepro_2022_134960
crossref_primary_10_3390_microorganisms12040779
crossref_primary_10_1016_j_ecolmodel_2022_109949
crossref_primary_10_1016_S2095_3119_20_63478_5
crossref_primary_10_3390_plants11243452
crossref_primary_10_1093_femsec_fiz188
crossref_primary_10_1016_j_jenvman_2022_117137
crossref_primary_10_1016_j_tplants_2024_09_004
crossref_primary_10_1146_annurev_phyto_021622_104551
crossref_primary_10_1111_nph_18010
crossref_primary_10_1016_j_scitotenv_2020_140682
crossref_primary_10_1093_femsec_fiab141
crossref_primary_10_1002_ps_8405
crossref_primary_10_1098_rstb_2019_0592
crossref_primary_10_3389_fmicb_2017_01645
crossref_primary_10_1016_j_sajb_2023_12_031
crossref_primary_10_7717_peerj_1923
crossref_primary_10_1111_ele_14433
crossref_primary_10_1186_s40168_024_01883_0
crossref_primary_10_3389_fmicb_2023_1188376
crossref_primary_10_1128_AEM_03391_16
crossref_primary_10_1016_j_micres_2020_126446
crossref_primary_10_1016_j_scitotenv_2021_145069
crossref_primary_10_1111_oik_10299
crossref_primary_10_1016_j_foreco_2018_10_028
crossref_primary_10_1007_s11104_024_07052_4
crossref_primary_10_1111_1462_2920_70081
crossref_primary_10_7717_peerj_17587
crossref_primary_10_1016_j_isci_2022_103821
crossref_primary_10_3389_fmicb_2023_1322641
crossref_primary_10_3389_fpls_2020_01186
crossref_primary_10_3390_horticulturae8121138
crossref_primary_10_1016_j_soilbio_2017_05_029
crossref_primary_10_1002_jcsm_12585
crossref_primary_10_1073_pnas_2410210121
crossref_primary_10_3390_agronomy12092221
crossref_primary_10_1007_s11104_024_06498_w
crossref_primary_10_1093_femsec_fiy071
crossref_primary_10_1128_aem_00963_22
crossref_primary_10_1016_j_aquaculture_2022_738521
crossref_primary_10_1371_journal_pone_0286285
crossref_primary_10_1016_j_tree_2019_04_012
crossref_primary_10_3389_fgene_2021_697090
crossref_primary_10_1007_s11368_022_03165_4
crossref_primary_10_1016_j_apsoil_2023_105155
crossref_primary_10_1186_s40793_023_00524_7
crossref_primary_10_1016_j_apsoil_2023_105032
crossref_primary_10_1007_s11104_023_06464_y
crossref_primary_10_1016_j_scitotenv_2024_176664
crossref_primary_10_1016_j_soilbio_2022_108604
crossref_primary_10_1038_s41559_022_01673_7
crossref_primary_10_1021_acs_jafc_4c09178
crossref_primary_10_3389_fmicb_2021_633276
crossref_primary_10_1094_PBIOMES_06_23_0046_R
crossref_primary_10_3390_microorganisms12112322
crossref_primary_10_1016_j_apsoil_2019_103364
crossref_primary_10_3390_microorganisms10030547
crossref_primary_10_3390_microorganisms11030694
crossref_primary_10_1016_j_tplants_2022_04_002
crossref_primary_10_1111_gcb_13460
crossref_primary_10_15252_msb_202110355
crossref_primary_10_1016_j_isci_2023_107144
crossref_primary_10_1016_j_csbj_2021_09_035
crossref_primary_10_1128_aem_01566_23
crossref_primary_10_1016_j_apsoil_2019_103468
crossref_primary_10_1007_s11104_024_06680_0
crossref_primary_10_1016_j_micres_2023_127491
crossref_primary_10_1094_PHP_08_20_0069_RV
crossref_primary_10_1186_s12866_022_02517_x
crossref_primary_10_1146_annurev_ecolsys_110316_022821
crossref_primary_10_1002_imt2_75
crossref_primary_10_1186_s12870_024_04910_2
crossref_primary_10_3389_fmicb_2022_828196
crossref_primary_10_1016_j_jwpe_2024_106888
crossref_primary_10_1016_j_mib_2021_05_003
crossref_primary_10_1371_journal_ppat_1007740
crossref_primary_10_3389_fpls_2023_1107690
crossref_primary_10_1016_j_apsoil_2023_105018
crossref_primary_10_1038_s41522_021_00204_9
crossref_primary_10_1128_mbio_02726_23
crossref_primary_10_1038_s41477_018_0139_4
crossref_primary_10_1007_s11104_024_06595_w
crossref_primary_10_1631_jzus_B2300914
crossref_primary_10_1016_j_bcab_2024_103433
crossref_primary_10_3390_biology12081130
crossref_primary_10_1146_annurev_genet_120215_034952
crossref_primary_10_1038_s41396_018_0300_0
crossref_primary_10_1016_j_biocontrol_2025_105743
crossref_primary_10_1016_j_still_2024_106364
crossref_primary_10_1128_msystems_00361_22
crossref_primary_10_1111_evo_14092
crossref_primary_10_1007_s10658_020_02005_w
crossref_primary_10_1007_s11104_020_04545_w
crossref_primary_10_1016_j_ejsobi_2023_103587
crossref_primary_10_1016_j_envpol_2025_125738
crossref_primary_10_3389_fmicb_2024_1455880
crossref_primary_10_1094_PBIOMES_09_20_0065_R
crossref_primary_10_1111_ele_13521
crossref_primary_10_1186_s12866_022_02626_7
crossref_primary_10_1186_s40793_023_00526_5
crossref_primary_10_1016_j_bcab_2024_103320
crossref_primary_10_1016_j_biocontrol_2022_104937
crossref_primary_10_1016_j_envpol_2022_120344
crossref_primary_10_1016_j_tplants_2018_10_011
crossref_primary_10_1016_j_pedobi_2023_150928
crossref_primary_10_1016_j_envpol_2020_114225
crossref_primary_10_1093_ismejo_wrae220
crossref_primary_10_1093_femsec_fiac085
crossref_primary_10_1038_s41467_024_49150_y
crossref_primary_10_1371_journal_pone_0289772
crossref_primary_10_3389_fmicb_2021_619499
crossref_primary_10_1002_sae2_12029
crossref_primary_10_1016_j_isci_2022_104185
crossref_primary_10_12677_AMB_2022_112017
crossref_primary_10_1038_s41564_021_00997_7
crossref_primary_10_1016_j_isci_2023_107875
crossref_primary_10_1094_PBIOMES_04_23_0025_R
crossref_primary_10_1128_AEM_02326_20
crossref_primary_10_3389_fmicb_2023_1094034
crossref_primary_10_1111_1462_2920_70008
crossref_primary_10_3389_fmicb_2020_605622
crossref_primary_10_1016_j_agee_2023_108501
crossref_primary_10_3390_microorganisms12112290
crossref_primary_10_1016_j_catena_2025_108822
crossref_primary_10_3389_fpls_2019_00978
crossref_primary_10_1186_s42523_020_00028_6
crossref_primary_10_1111_brv_13058
crossref_primary_10_1007_s11104_022_05436_y
crossref_primary_10_1016_j_envres_2023_115298
crossref_primary_10_1016_j_apsoil_2020_103807
crossref_primary_10_1016_j_jplph_2021_153420
crossref_primary_10_1111_mec_16873
crossref_primary_10_3389_fmicb_2023_1218474
crossref_primary_10_1016_j_agee_2025_109562
crossref_primary_10_1016_j_pbi_2017_04_018
crossref_primary_10_3389_fmicb_2022_898505
crossref_primary_10_1016_j_pmpp_2022_101834
crossref_primary_10_1094_PBIOMES_5_3
crossref_primary_10_3389_fmicb_2022_1009689
crossref_primary_10_3390_agronomy13020481
crossref_primary_10_3389_fmicb_2024_1328863
crossref_primary_10_1038_nbt_4232
crossref_primary_10_1111_1365_2435_13624
crossref_primary_10_1016_j_mib_2022_102153
crossref_primary_10_1039_D4EN00511B
crossref_primary_10_1016_j_apsoil_2024_105823
crossref_primary_10_1038_srep33962
crossref_primary_10_1126_sciadv_aaw0759
crossref_primary_10_1016_j_soilbio_2024_109447
crossref_primary_10_1016_j_soilbio_2023_109246
crossref_primary_10_1038_s41598_020_71309_y
crossref_primary_10_1016_j_funeco_2020_101024
crossref_primary_10_1093_femsec_fiae052
crossref_primary_10_1016_j_jenvman_2023_117524
crossref_primary_10_1007_s11104_020_04576_3
crossref_primary_10_1098_rspb_2018_2035
crossref_primary_10_3389_fmicb_2021_665380
crossref_primary_10_1021_acs_jafc_3c06410
crossref_primary_10_1094_PBIOMES_4_2
crossref_primary_10_1007_s00253_024_13184_5
crossref_primary_10_1007_s11104_019_04104_y
crossref_primary_10_1016_j_envint_2024_108896
crossref_primary_10_1016_j_pmpp_2024_102393
crossref_primary_10_1039_D3EN00797A
crossref_primary_10_1007_s11104_024_06709_4
crossref_primary_10_1094_PBIOMES_01_19_0005_R
crossref_primary_10_1007_s11104_019_04321_5
crossref_primary_10_3390_agronomy13030643
crossref_primary_10_1146_annurev_phyto_080516_035623
crossref_primary_10_1038_s43705_022_00094_8
crossref_primary_10_1128_aem_02237_23
crossref_primary_10_1016_j_apsoil_2017_07_015
crossref_primary_10_1094_PHYTOFR_04_21_0026_RVW
crossref_primary_10_3390_foods13101473
crossref_primary_10_1186_s40793_024_00548_7
crossref_primary_10_1016_j_envpol_2019_113051
crossref_primary_10_1038_s41396_022_01314_8
crossref_primary_10_1186_s40168_020_00824_x
crossref_primary_10_1371_journal_ppat_1005939
crossref_primary_10_1002_ecy_1670
crossref_primary_10_1038_s41564_020_0719_8
crossref_primary_10_3389_fmicb_2024_1424633
crossref_primary_10_1016_j_scitotenv_2019_07_262
crossref_primary_10_1016_j_soilbio_2023_109231
crossref_primary_10_3390_f15112004
crossref_primary_10_1128_mbio_02892_21
crossref_primary_10_3390_plants12244074
crossref_primary_10_1111_1751_7915_14422
crossref_primary_10_1038_s41396_020_00796_8
crossref_primary_10_1146_annurev_phyto_021021_041457
crossref_primary_10_3390_microorganisms12020251
crossref_primary_10_1007_s00248_020_01532_7
crossref_primary_10_1016_j_cels_2019_11_004
crossref_primary_10_3389_fmicb_2019_02252
crossref_primary_10_3390_agronomy12051024
crossref_primary_10_3389_fpls_2022_1006303
crossref_primary_10_3390_ijerph18084341
crossref_primary_10_1038_s41467_023_43793_z
crossref_primary_10_1016_j_indcrop_2024_119187
crossref_primary_10_1038_s41467_023_40184_2
crossref_primary_10_3390_agronomy14112685
crossref_primary_10_3390_su13010010
crossref_primary_10_1007_s10126_025_10440_1
crossref_primary_10_1111_ejss_13145
crossref_primary_10_1128_spectrum_02524_21
crossref_primary_10_3389_fmicb_2022_1033158
crossref_primary_10_1007_s10653_024_01956_x
crossref_primary_10_1016_j_scitotenv_2024_176047
crossref_primary_10_1111_1365_2745_12783
crossref_primary_10_1111_1462_2920_13708
crossref_primary_10_1094_MPMI_07_19_0198_R
crossref_primary_10_26599_FSHW_2023_9250031
crossref_primary_10_1007_s11104_016_3159_8
crossref_primary_10_1016_j_lwt_2021_111285
crossref_primary_10_1128_AEM_02560_20
crossref_primary_10_3390_microorganisms9040811
crossref_primary_10_1016_j_scitotenv_2023_165801
crossref_primary_10_1094_PHYTOFR_02_22_0010_R
crossref_primary_10_1186_s40168_024_01814_z
crossref_primary_10_1016_j_jes_2023_02_037
crossref_primary_10_1007_s11104_023_06393_w
crossref_primary_10_1021_acs_est_1c01615
crossref_primary_10_1038_s41396_022_01290_z
crossref_primary_10_1007_s11356_021_14033_y
crossref_primary_10_1016_j_ecoenv_2024_116289
crossref_primary_10_1094_PBIOMES_04_22_0028_FI
crossref_primary_10_1002_ece3_11228
crossref_primary_10_1073_pnas_2111521118
crossref_primary_10_3389_fmicb_2023_1301062
crossref_primary_10_1002_jcp_30974
crossref_primary_10_1016_j_apsoil_2022_104767
crossref_primary_10_1016_j_scitotenv_2019_02_091
crossref_primary_10_1038_s41396_018_0234_6
crossref_primary_10_1093_femsre_fuy008
crossref_primary_10_3390_plants10122697
crossref_primary_10_1111_ele_12916
crossref_primary_10_1126_sciadv_abk3076
crossref_primary_10_1016_j_envexpbot_2024_105939
crossref_primary_10_3390_ijms19051385
crossref_primary_10_3390_microorganisms8091377
crossref_primary_10_1016_j_apsoil_2022_104416
crossref_primary_10_3390_toxins12030152
crossref_primary_10_1094_MPMI_10_20_0298_R
crossref_primary_10_1002_ldr_5257
crossref_primary_10_1038_s41396_017_0003_y
crossref_primary_10_1186_s40168_020_00892_z
crossref_primary_10_1007_s11104_020_04826_4
crossref_primary_10_1093_hr_uhae236
crossref_primary_10_3389_fmicb_2023_1117355
crossref_primary_10_3389_fmicb_2020_585404
crossref_primary_10_1016_j_scitotenv_2023_164915
crossref_primary_10_3390_agronomy13030654
crossref_primary_10_3389_fmicb_2022_992909
crossref_primary_10_3390_microorganisms13010148
crossref_primary_10_1002_ldr_4275
crossref_primary_10_1094_PBIOMES_01_20_0007_R
crossref_primary_10_1016_j_foodchem_2024_140151
crossref_primary_10_3389_fmicb_2020_00927
crossref_primary_10_1002_ecy_1852
crossref_primary_10_1111_1462_2920_15926
Cites_doi 10.1099/00221287-147-4-995
10.1016/j.apsoil.2011.03.013
10.1146/annurev.phyto.43.113004.133839
10.1038/35012234
10.1073/pnas.87.24.9610
10.1126/science.1253497
10.1126/science.1224203
10.1038/nature11237
10.1016/j.biocontrol.2012.12.010
10.1038/nrmicro2259
10.1126/science.288.5467.852
10.1046/j.1461-0248.2003.00530.x
10.1126/science.1188321
10.1038/nm.3492
10.1073/pnas.1109326109
10.1038/nature00776
10.1111/ele.12093
10.1111/j.1600-0706.2010.18557.x
10.1094/MPMI-10-14-0331-FI
10.1111/j.1365-2745.2011.01940.x
10.1046/j.1461-0248.1999.00083.x
10.1016/j.apsoil.2005.12.003
10.3389/fevo.2014.00036
10.1038/ismej.2010.5
10.1126/science.286.5444.1577
10.1046/j.1365-2745.1999.00321.x
10.1098/rstb.2008.0286
10.1073/pnas.0403458101
10.1146/annurev.phyto.41.052002.095652
10.1038/ismej.2013.196
10.1128/JB.182.5.1215-1225.2000
10.1111/ele.12118
10.1126/science.1212782
10.1128/AEM.68.9.4383-4389.2002
10.1111/j.1461-0248.2005.00828.x
10.1146/annurev.micro.62.081307.162918
10.1099/mic.0.2006/001453-0
10.1007/s11104-008-9568-6
10.1038/ncomms2392
10.3389/fpls.2013.00081
10.1126/science.1203980
10.1016/j.tplants.2012.04.001
10.2307/1939114
10.1111/ele.12099
10.1890/09-2219.1
10.1093/jpe/rtt020
10.1073/pnas.0831096100
10.1111/j.1600-0706.2013.00859.x
10.1111/j.1365-2699.2006.01444.x
10.1890/0012-9658(1997)078[0081:CIRLAG]2.0.CO;2
10.1073/pnas.1305198110
10.1038/nrmicro2537
10.1111/j.1461-0248.2011.01732.x
10.1007/s00248-004-0179-3
10.1038/ncomms1597
10.1890/14-1001.1
10.1111/j.1365-2435.2012.02060.x
10.1111/j.1461-0248.2011.01613.x
10.1093/molbev/msu229
10.1111/j.1574-6968.1992.tb05682.x
10.2307/3546992
10.1128/JB.180.17.4325-4331.1998
10.2307/1935352
ContentType Journal Article
Copyright The Author(s) 2015
Copyright Nature Publishing Group Sep 2015
Copyright © 2015, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2015 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.
Copyright_xml – notice: The Author(s) 2015
– notice: Copyright Nature Publishing Group Sep 2015
– notice: Copyright © 2015, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2015 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.
DBID C6C
AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
3V.
7QL
7QP
7QR
7SN
7SS
7ST
7T5
7T7
7TM
7TO
7X7
7XB
88E
8AO
8FD
8FE
8FG
8FH
8FI
8FJ
8FK
ABUWG
AEUYN
AFKRA
ARAPS
AZQEC
BBNVY
BENPR
BGLVJ
BHPHI
C1K
CCPQU
DWQXO
FR3
FYUFA
GHDGH
GNUQQ
H94
HCIFZ
K9.
LK8
M0S
M1P
M7P
P5Z
P62
P64
PHGZM
PHGZT
PIMPY
PJZUB
PKEHL
PPXIY
PQEST
PQGLB
PQQKQ
PQUKI
PRINS
RC3
SOI
7X8
5PM
DOI 10.1038/ncomms9413
DatabaseName SpringerOpen Free (Free internet resource, activated by CARLI)
CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
ProQuest Central (Corporate)
Bacteriology Abstracts (Microbiology B)
Calcium & Calcified Tissue Abstracts
Chemoreception Abstracts
Ecology Abstracts
Entomology Abstracts (Full archive)
Environment Abstracts
Immunology Abstracts
Industrial and Applied Microbiology Abstracts (Microbiology A)
Nucleic Acids Abstracts
Oncogenes and Growth Factors Abstracts
Health & Medical Collection
ProQuest Central (purchase pre-March 2016)
Medical Database (Alumni Edition)
ProQuest Pharma Collection
Technology Research Database
ProQuest SciTech Collection
ProQuest Technology Collection
ProQuest Natural Science Collection
Hospital Premium Collection
Hospital Premium Collection (Alumni Edition)
ProQuest Central (Alumni) (purchase pre-March 2016)
ProQuest Central (Alumni)
ProQuest One Sustainability
ProQuest Central UK/Ireland
Advanced Technologies & Aerospace Collection
ProQuest Central Essentials
Biological Science Collection
ProQuest Central
Technology Collection
Natural Science Collection
Environmental Sciences and Pollution Management
ProQuest One Community College
ProQuest Central Korea
Engineering Research Database
Proquest Health Research Premium Collection
Health Research Premium Collection (Alumni)
ProQuest Central Student
AIDS and Cancer Research Abstracts
SciTech Premium Collection
ProQuest Health & Medical Complete (Alumni)
Biological Sciences
ProQuest Health & Medical Collection
Medical Database
Biological Science Database
Advanced Technologies & Aerospace Database
ProQuest Advanced Technologies & Aerospace Collection
Biotechnology and BioEngineering Abstracts
ProQuest Central Premium
ProQuest One Academic (New)
Publicly Available Content Database
ProQuest Health & Medical Research Collection
ProQuest One Academic Middle East (New)
ProQuest One Health & Nursing
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Applied & Life Sciences
ProQuest One Academic
ProQuest One Academic UKI Edition
ProQuest Central China
Genetics Abstracts
Environment Abstracts
MEDLINE - Academic
PubMed Central (Full Participant titles)
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
Publicly Available Content Database
ProQuest Central Student
Oncogenes and Growth Factors Abstracts
ProQuest Advanced Technologies & Aerospace Collection
ProQuest Central Essentials
Nucleic Acids Abstracts
SciTech Premium Collection
ProQuest Central China
Environmental Sciences and Pollution Management
ProQuest One Applied & Life Sciences
ProQuest One Sustainability
Health Research Premium Collection
Natural Science Collection
Health & Medical Research Collection
Biological Science Collection
Chemoreception Abstracts
Industrial and Applied Microbiology Abstracts (Microbiology A)
ProQuest Central (New)
ProQuest Medical Library (Alumni)
Advanced Technologies & Aerospace Collection
ProQuest Biological Science Collection
ProQuest One Academic Eastern Edition
ProQuest Hospital Collection
ProQuest Technology Collection
Health Research Premium Collection (Alumni)
Biological Science Database
Ecology Abstracts
ProQuest Hospital Collection (Alumni)
Biotechnology and BioEngineering Abstracts
Entomology Abstracts
ProQuest Health & Medical Complete
ProQuest One Academic UKI Edition
Engineering Research Database
ProQuest One Academic
Calcium & Calcified Tissue Abstracts
ProQuest One Academic (New)
Technology Collection
Technology Research Database
ProQuest One Academic Middle East (New)
ProQuest Health & Medical Complete (Alumni)
ProQuest Central (Alumni Edition)
ProQuest One Community College
ProQuest One Health & Nursing
ProQuest Natural Science Collection
ProQuest Pharma Collection
ProQuest Central
ProQuest Health & Medical Research Collection
Genetics Abstracts
Health and Medicine Complete (Alumni Edition)
ProQuest Central Korea
Bacteriology Abstracts (Microbiology B)
AIDS and Cancer Research Abstracts
ProQuest SciTech Collection
Advanced Technologies & Aerospace Database
ProQuest Medical Library
Immunology Abstracts
Environment Abstracts
ProQuest Central (Alumni)
MEDLINE - Academic
DatabaseTitleList MEDLINE
Publicly Available Content Database

CrossRef

MEDLINE - Academic
Database_xml – sequence: 1
  dbid: C6C
  name: SpringerOpen Free (Free internet resource, activated by CARLI)
  url: http://www.springeropen.com/
  sourceTypes: Publisher
– sequence: 2
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 3
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
– sequence: 4
  dbid: 8FG
  name: ProQuest Technology Collection
  url: https://search.proquest.com/technologycollection1
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 2041-1723
ExternalDocumentID PMC4598729
3816325541
26400552
10_1038_ncomms9413
Genre Research Support, Non-U.S. Gov't
Journal Article
GroupedDBID ---
0R~
39C
3V.
4.4
53G
5VS
70F
7X7
88E
8AO
8FE
8FG
8FH
8FI
8FJ
AAHBH
AAJSJ
ABAWZ
ABUWG
ACGFO
ACGFS
ACIWK
ACMJI
ACPRK
ACSMW
ADBBV
ADFRT
ADMLS
ADRAZ
AENEX
AEUYN
AFKRA
AFRAH
AHMBA
AJTQC
ALIPV
ALMA_UNASSIGNED_HOLDINGS
AMTXH
AOIJS
ARAPS
ASPBG
AVWKF
AZFZN
BAPOH
BBNVY
BCNDV
BENPR
BGLVJ
BHPHI
BPHCQ
BVXVI
C6C
CCPQU
DIK
EBLON
EBS
EE.
EJD
EMOBN
F5P
FEDTE
FYUFA
GROUPED_DOAJ
HCIFZ
HMCUK
HVGLF
HYE
HZ~
KQ8
LK8
M1P
M48
M7P
M~E
NAO
O9-
OK1
P2P
P62
PIMPY
PQQKQ
PROAC
PSQYO
RNS
RNT
RNTTT
RPM
SNYQT
SV3
TSG
UKHRP
AASML
AAYXX
CITATION
PHGZM
PHGZT
CGR
CUY
CVF
ECM
EIF
NPM
PJZUB
PPXIY
PQGLB
7QL
7QP
7QR
7SN
7SS
7ST
7T5
7T7
7TM
7TO
7XB
8FD
8FK
AARCD
AZQEC
C1K
DWQXO
FR3
GNUQQ
H94
K9.
P64
PKEHL
PQEST
PQUKI
PRINS
RC3
SOI
7X8
5PM
ID FETCH-LOGICAL-c508t-1eab5fb84ef45085aef79270eaf4a2de81115e2e6b553af3efbe3767d96a8c8a3
IEDL.DBID M48
ISSN 2041-1723
IngestDate Thu Aug 21 13:46:36 EDT 2025
Fri Jul 11 00:22:58 EDT 2025
Wed Aug 13 04:09:50 EDT 2025
Mon Jul 21 05:56:43 EDT 2025
Tue Jul 01 02:31:05 EDT 2025
Thu Apr 24 23:06:33 EDT 2025
Fri Feb 21 02:39:42 EST 2025
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 1
Language English
License This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c508t-1eab5fb84ef45085aef79270eaf4a2de81115e2e6b553af3efbe3767d96a8c8a3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 14
content type line 23
These authors contributed equally to this work.
OpenAccessLink http://journals.scholarsportal.info/openUrl.xqy?doi=10.1038/ncomms9413
PMID 26400552
PQID 1715918690
PQPubID 546298
ParticipantIDs pubmedcentral_primary_oai_pubmedcentral_nih_gov_4598729
proquest_miscellaneous_1717474815
proquest_journals_1715918690
pubmed_primary_26400552
crossref_primary_10_1038_ncomms9413
crossref_citationtrail_10_1038_ncomms9413
springer_journals_10_1038_ncomms9413
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 20150924
PublicationDateYYYYMMDD 2015-09-24
PublicationDate_xml – month: 9
  year: 2015
  text: 20150924
  day: 24
PublicationDecade 2010
PublicationPlace London
PublicationPlace_xml – name: London
– name: England
PublicationTitle Nature communications
PublicationTitleAbbrev Nat Commun
PublicationTitleAlternate Nat Commun
PublicationYear 2015
Publisher Nature Publishing Group UK
Nature Publishing Group
Nature Pub. Group
Publisher_xml – name: Nature Publishing Group UK
– name: Nature Publishing Group
– name: Nature Pub. Group
References Lundberg (CR3) 2012; 488
Sugihara, Bersier, Southwood, Pimm, May (CR41) 2003; 100
Lugtenberg, Kamilova (CR44) 2009; 63
Rohr, Saavedra, Bascompte (CR25) 2014; 345
Copeland, Yuan, Layeghifard, Wang, Guttman (CR52) 2015; 28
Mendes (CR7) 2011; 332
Levine (CR14) 2000; 288
CR39
Knops (CR15) 1999; 2
Rodriguez-Girones, Santamaria (CR61) 2006; 33
Mallon (CR36) 2015; 96
Chaparro, Badri, Vivanco (CR51) 2014; 8
Bletz (CR8) 2013; 16
Shin (CR6) 2011; 334
Matos, Kerkhof, Garland (CR19) 2005; 49
Wei (CR31) 2013; 65
Irikiin, Nishiyama, Otsuka, Senoo (CR18) 2006; 34
McCann (CR20) 2000; 405
Raaijmakers, Paulitz, Steinberg, Alabouvette, Moënne-Loccoz (CR47) 2009; 321
Guidot (CR55) 2014; 31
Strange, Scott (CR56) 2005; 43
Dillon, Vennard, Buckling, Charnley (CR10) 2005; 8
Lurgi, Galiana, López, Joppa, Montoya (CR27) 2014; 2
Whitfeld, Lodge, Roth, Reich (CR33) 2014; 7
Von Bodman, Bauer, Coplin (CR30) 2003; 41
Berendsen, Pieterse, Bakker (CR5) 2012; 17
Nakatsu (CR54) 1998; 180
Scheublin, Sanders, Keel, van der Meer (CR4) 2010; 4
Amarasekare (CR38) 2003; 6
Tilman (CR16) 1997; 78
Galiana, Lurgi, Montoya, López (CR28) 2014; 123
De Roy (CR42) 2013; 4
Kondoh, Kato, Sakato (CR49) 2010; 91
Costello, Stagaman, Dethlefsen, Bohannan, Relman (CR1) 2012; 336
Case (CR11) 1990; 87
Freilich (CR48) 2011; 2
Tilman (CR35) 2004; 101
Gomez, Buckling (CR37) 2013; 16
Grice, Segre (CR2) 2011; 9
CR17
Jousset, Schmid, Scheu, Eisenhauer (CR45) 2011; 14
Schnider-Keel (CR60) 2000; 182
Baiser, Russell, Lockwood (CR23) 2010; 119
Paine (CR21) 1984; 65
van Elsas (CR9) 2012; 109
Ji, Wilson (CR34) 2002; 68
Wei (CR32) 2011; 48
Gibson, Connolly, Hartnett, Weidenhamer (CR59) 1999; 87
Rochelle, Fry, J.Parkes, Weightman (CR58) 1992; 79
Hol, Bezemer, Biere (CR46) 2013; 4
Kennedy (CR12) 2002; 417
Thebault, Fontaine (CR22) 2010; 329
Stachowicz, Whitlatch, Osman (CR13) 1999; 286
Riley, Cooper, Lenski, Forney, Marsh (CR53) 2001; 147
Eisenhauer, Schulz, Scheu, Jousset, Pfrender (CR62) 2013; 27
Hibbing, Fuqua, Parsek, Peterson (CR57) 2010; 8
de Vries (CR50) 2013; 110
Latz (CR63) 2012; 100
Taur, Pamer (CR43) 2014; 20
Poisot, Mouquet, Gravel (CR40) 2013; 16
Romanuk (CR26) 2009; 364
Yamada (CR29) 2007; 153
Kéfi (CR24) 2012; 15
KS McCann (BFncomms9413_CR20) 2000; 405
N Eisenhauer (BFncomms9413_CR62) 2013; 27
BFncomms9413_CR17
WHG Hol (BFncomms9413_CR46) 2013; 4
U Schnider-Keel (BFncomms9413_CR60) 2000; 182
P Amarasekare (BFncomms9413_CR38) 2003; 6
P Gomez (BFncomms9413_CR37) 2013; 16
JK Copeland (BFncomms9413_CR52) 2015; 28
Z Wei (BFncomms9413_CR31) 2013; 65
Y Taur (BFncomms9413_CR43) 2014; 20
SB Von Bodman (BFncomms9413_CR30) 2003; 41
JM Levine (BFncomms9413_CR14) 2000; 288
T Yamada (BFncomms9413_CR29) 2007; 153
RP Rohr (BFncomms9413_CR25) 2014; 345
EA Grice (BFncomms9413_CR2) 2011; 9
MS Riley (BFncomms9413_CR53) 2001; 147
G Sugihara (BFncomms9413_CR41) 2003; 100
A Jousset (BFncomms9413_CR45) 2011; 14
TR Scheublin (BFncomms9413_CR4) 2010; 4
TJS Whitfeld (BFncomms9413_CR33) 2014; 7
JD van Elsas (BFncomms9413_CR9) 2012; 109
PA Rochelle (BFncomms9413_CR58) 1992; 79
N Galiana (BFncomms9413_CR28) 2014; 123
JJ Stachowicz (BFncomms9413_CR13) 1999; 286
B Lugtenberg (BFncomms9413_CR44) 2009; 63
RN Strange (BFncomms9413_CR56) 2005; 43
TJ Case (BFncomms9413_CR11) 1990; 87
D Tilman (BFncomms9413_CR35) 2004; 101
TN Romanuk (BFncomms9413_CR26) 2009; 364
A Matos (BFncomms9413_CR19) 2005; 49
ME Hibbing (BFncomms9413_CR57) 2010; 8
BFncomms9413_CR39
JM Chaparro (BFncomms9413_CR51) 2014; 8
Z Wei (BFncomms9413_CR32) 2011; 48
R Paine (BFncomms9413_CR21) 1984; 65
B Baiser (BFncomms9413_CR23) 2010; 119
E Thebault (BFncomms9413_CR22) 2010; 329
S Kéfi (BFncomms9413_CR24) 2012; 15
DS Lundberg (BFncomms9413_CR3) 2012; 488
M Kondoh (BFncomms9413_CR49) 2010; 91
CH Nakatsu (BFncomms9413_CR54) 1998; 180
CA Mallon (BFncomms9413_CR36) 2015; 96
RL Berendsen (BFncomms9413_CR5) 2012; 17
A Guidot (BFncomms9413_CR55) 2014; 31
E Latz (BFncomms9413_CR63) 2012; 100
T Poisot (BFncomms9413_CR40) 2013; 16
MA Rodriguez-Girones (BFncomms9413_CR61) 2006; 33
EK Costello (BFncomms9413_CR1) 2012; 336
TA Kennedy (BFncomms9413_CR12) 2002; 417
D Tilman (BFncomms9413_CR16) 1997; 78
K De Roy (BFncomms9413_CR42) 2013; 4
JM Knops (BFncomms9413_CR15) 1999; 2
Y Irikiin (BFncomms9413_CR18) 2006; 34
M Lurgi (BFncomms9413_CR27) 2014; 2
P Ji (BFncomms9413_CR34) 2002; 68
MC Bletz (BFncomms9413_CR8) 2013; 16
R Mendes (BFncomms9413_CR7) 2011; 332
FT de Vries (BFncomms9413_CR50) 2013; 110
DJ Gibson (BFncomms9413_CR59) 1999; 87
SC Shin (BFncomms9413_CR6) 2011; 334
S Freilich (BFncomms9413_CR48) 2011; 2
RJ Dillon (BFncomms9413_CR10) 2005; 8
JM Raaijmakers (BFncomms9413_CR47) 2009; 321
References_xml – volume: 147
  start-page: 995
  year: 2001
  end-page: 1006
  ident: CR53
  article-title: Rapid phenotypic change and diversification of a soil bacterium during 1000 generations of experimental evolution
  publication-title: Microbiology
  doi: 10.1099/00221287-147-4-995
– volume: 48
  start-page: 152
  year: 2011
  end-page: 159
  ident: CR32
  article-title: Efficacy of Bacillus-fortified organic fertiliser in controlling bacterial wilt of tomato in the field
  publication-title: Appl. Soil Ecol.
  doi: 10.1016/j.apsoil.2011.03.013
– volume: 43
  start-page: 83
  year: 2005
  end-page: 116
  ident: CR56
  article-title: Plant disease: a threat to global food security
  publication-title: Annu. Rev. Phytopathol.
  doi: 10.1146/annurev.phyto.43.113004.133839
– ident: CR39
– volume: 405
  start-page: 228
  year: 2000
  end-page: 233
  ident: CR20
  article-title: The diversity–stability debate
  publication-title: Nature
  doi: 10.1038/35012234
– volume: 87
  start-page: 9610
  year: 1990
  end-page: 9614
  ident: CR11
  article-title: Invasion resistance arises in strongly interacting species-rich model competition communities
  publication-title: Proc. Natl. Acad. Sci.
  doi: 10.1073/pnas.87.24.9610
– volume: 345
  start-page: 1253497
  year: 2014
  ident: CR25
  article-title: Ecological networks. On the structural stability of mutualistic systems
  publication-title: Science
  doi: 10.1126/science.1253497
– volume: 336
  start-page: 1255
  year: 2012
  end-page: 1262
  ident: CR1
  article-title: The application of ecological theory toward an understanding of the human microbiome
  publication-title: Science
  doi: 10.1126/science.1224203
– volume: 488
  start-page: 86
  year: 2012
  end-page: 90
  ident: CR3
  article-title: Defining the core root microbiome
  publication-title: Nature
  doi: 10.1038/nature11237
– volume: 65
  start-page: 278
  year: 2013
  end-page: 285
  ident: CR31
  article-title: The congeneric strain QL-A6 of as an effective biocontrol agent for bacterial wilt of tomato
  publication-title: Biol. Control
  doi: 10.1016/j.biocontrol.2012.12.010
– volume: 8
  start-page: 15
  year: 2010
  end-page: 25
  ident: CR57
  article-title: Bacterial competition: surviving and thriving in the microbial jungle
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/nrmicro2259
– volume: 288
  start-page: 852
  year: 2000
  end-page: 854
  ident: CR14
  article-title: Species diversity and biological invasions: relating local process to community pattern
  publication-title: Science
  doi: 10.1126/science.288.5467.852
– volume: 6
  start-page: 1109
  year: 2003
  end-page: 1122
  ident: CR38
  article-title: Competitive coexistence in spatially structured environments: a synthesis
  publication-title: Ecol. Lett.
  doi: 10.1046/j.1461-0248.2003.00530.x
– volume: 329
  start-page: 853
  year: 2010
  end-page: 856
  ident: CR22
  article-title: Stability of ecological communities and the architecture of mutualistic and trophic networks
  publication-title: Science
  doi: 10.1126/science.1188321
– volume: 20
  start-page: 246
  year: 2014
  end-page: 247
  ident: CR43
  article-title: Harnessing microbiota to kill a pathogen: fixing the microbiota to treat infections
  publication-title: Nat. Med.
  doi: 10.1038/nm.3492
– volume: 109
  start-page: 1159
  year: 2012
  end-page: 1164
  ident: CR9
  article-title: Microbial diversity determines the invasion of soil by a bacterial pathogen
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1109326109
– volume: 417
  start-page: 636
  year: 2002
  end-page: 638
  ident: CR12
  article-title: Biodiversity as a barrier to ecological invasion
  publication-title: Nature
  doi: 10.1038/nature00776
– volume: 16
  start-page: 650
  year: 2013
  end-page: 655
  ident: CR37
  article-title: Real-time microbial adaptive diversification in soil
  publication-title: Ecol. Lett.
  doi: 10.1111/ele.12093
– volume: 119
  start-page: 1970
  year: 2010
  end-page: 1976
  ident: CR23
  article-title: Connectance determines invasion success via trophic interactions in model food webs
  publication-title: Oikos
  doi: 10.1111/j.1600-0706.2010.18557.x
– volume: 28
  start-page: 274
  year: 2015
  end-page: 285
  ident: CR52
  article-title: Seasonal community succession of the phyllosphere microbiome
  publication-title: Mol. Plant Microbe Interact.
  doi: 10.1094/MPMI-10-14-0331-FI
– volume: 100
  start-page: 597
  year: 2012
  end-page: 604
  ident: CR63
  article-title: Plant diversity improves protection against soil-borne pathogens by fostering antagonistic bacterial communities
  publication-title: J. Ecol.
  doi: 10.1111/j.1365-2745.2011.01940.x
– volume: 2
  start-page: 286
  year: 1999
  end-page: 293
  ident: CR15
  article-title: Effects of plant species richness on invasion dynamics, disease outbreaks, insect abundances and diversity
  publication-title: Ecol. Lett.
  doi: 10.1046/j.1461-0248.1999.00083.x
– volume: 34
  start-page: 27
  year: 2006
  end-page: 32
  ident: CR18
  article-title: Rhizobacterial community-level, sole carbon source utilization pattern affects the delay in the bacterial wilt of tomato grown in rhizobacterial community model system
  publication-title: Appl. Soil Ecol.
  doi: 10.1016/j.apsoil.2005.12.003
– volume: 2
  start-page: 36
  year: 2014
  ident: CR27
  article-title: Network complexity and species traits mediate the effects of biological invasions on dynamic food webs
  publication-title: Front. Ecol. Evol.
  doi: 10.3389/fevo.2014.00036
– volume: 4
  start-page: 752
  year: 2010
  end-page: 763
  ident: CR4
  article-title: Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi
  publication-title: ISME J.
  doi: 10.1038/ismej.2010.5
– volume: 286
  start-page: 1577
  year: 1999
  end-page: 1579
  ident: CR13
  article-title: Species diversity and invasion resistance in a marine ecosystem
  publication-title: Science
  doi: 10.1126/science.286.5444.1577
– volume: 87
  start-page: 1
  year: 1999
  end-page: 16
  ident: CR59
  article-title: Designs for greenhouse studies of interactions between plants
  publication-title: J. Ecol.
  doi: 10.1046/j.1365-2745.1999.00321.x
– volume: 364
  start-page: 1743
  year: 2009
  end-page: 1754
  ident: CR26
  article-title: Predicting invasion success in complex ecological networks
  publication-title: Philos. Trans. R. Soc. Lond. B Biol. Sci.
  doi: 10.1098/rstb.2008.0286
– volume: 101
  start-page: 10854
  year: 2004
  end-page: 10861
  ident: CR35
  article-title: Niche tradeoffs, neutrality, and community structure: a stochastic theory of resource competition, invasion, and community assembly
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0403458101
– volume: 41
  start-page: 455
  year: 2003
  end-page: 482
  ident: CR30
  article-title: Quorum sensing in plant-pathogenic bacteria
  publication-title: Annu. Rev. Phytopathol.
  doi: 10.1146/annurev.phyto.41.052002.095652
– volume: 8
  start-page: 790
  year: 2014
  end-page: 803
  ident: CR51
  article-title: Rhizosphere microbiome assemblage is affected by plant development
  publication-title: ISME J.
  doi: 10.1038/ismej.2013.196
– volume: 182
  start-page: 1215
  year: 2000
  end-page: 1225
  ident: CR60
  article-title: Autoinduction of 2,4-diacetylphloroglucinol biosynthesis in the biocontrol agent CHA0 and repression by the bacterial metabolites salicylate and pyoluteorin
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.182.5.1215-1225.2000
– volume: 16
  start-page: 853
  year: 2013
  end-page: 861
  ident: CR40
  article-title: Trophic complementarity drives the biodiversity-ecosystem functioning relationship in food webs
  publication-title: Ecol. Lett.
  doi: 10.1111/ele.12118
– volume: 334
  start-page: 670
  year: 2011
  end-page: 674
  ident: CR6
  article-title: Drosophila microbiome modulates host developmental and metabolic homeostasis via insulin signaling
  publication-title: Science
  doi: 10.1126/science.1212782
– volume: 68
  start-page: 4383
  year: 2002
  end-page: 4389
  ident: CR34
  article-title: Assessment of the importance of similarity in carbon source utilization profiles between the biological control agent and the pathogen in biological control of bacterial speck of tomato
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.68.9.4383-4389.2002
– volume: 8
  start-page: 1291
  year: 2005
  end-page: 1298
  ident: CR10
  article-title: Diversity of locust gut bacteria protects against pathogen invasion
  publication-title: Ecol. Lett.
  doi: 10.1111/j.1461-0248.2005.00828.x
– volume: 63
  start-page: 541
  year: 2009
  end-page: 556
  ident: CR44
  article-title: Plant-growth-promoting rhizobacteria
  publication-title: Annu. Rev. Microbiol.
  doi: 10.1146/annurev.micro.62.081307.162918
– volume: 153
  start-page: 2630
  year: 2007
  end-page: 2639
  ident: CR29
  article-title: New bacteriophages that infect the phytopathogen
  publication-title: Microbiology
  doi: 10.1099/mic.0.2006/001453-0
– volume: 321
  start-page: 341
  year: 2009
  end-page: 361
  ident: CR47
  article-title: The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms
  publication-title: Plant Soil
  doi: 10.1007/s11104-008-9568-6
– volume: 4
  start-page: 1383
  year: 2013
  ident: CR42
  article-title: Environmental conditions and community evenness determine the outcome of biological invasion
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms2392
– volume: 4
  start-page: 81
  year: 2013
  ident: CR46
  article-title: Getting the ecology into interactions between plants and the plant growth-promoting bacterium
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2013.00081
– volume: 332
  start-page: 1097
  year: 2011
  end-page: 1100
  ident: CR7
  article-title: Deciphering the rhizosphere microbiome for disease-suppressive bacteria
  publication-title: Science
  doi: 10.1126/science.1203980
– volume: 17
  start-page: 478
  year: 2012
  end-page: 486
  ident: CR5
  article-title: The rhizosphere microbiome and plant health
  publication-title: Trends Plant Sci.
  doi: 10.1016/j.tplants.2012.04.001
– volume: 65
  start-page: 1339
  year: 1984
  end-page: 1348
  ident: CR21
  article-title: Ecological determinism in the competition for space
  publication-title: Ecology
  doi: 10.2307/1939114
– volume: 16
  start-page: 807
  year: 2013
  end-page: 820
  ident: CR8
  article-title: Mitigating amphibian chytridiomycosis with bioaugmentation: characteristics of effective probiotics and strategies for their selection and use
  publication-title: Ecol. Lett.
  doi: 10.1111/ele.12099
– volume: 91
  start-page: 3123
  year: 2010
  end-page: 3130
  ident: CR49
  article-title: Food webs are built up with nested subwebs
  publication-title: Ecology
  doi: 10.1890/09-2219.1
– volume: 7
  start-page: 202
  year: 2014
  end-page: 209
  ident: CR33
  article-title: Community phylogenetic diversity and abiotic site characteristics influence abundance of the invasive plant L
  publication-title: J. Plant Ecol
  doi: 10.1093/jpe/rtt020
– volume: 100
  start-page: 5246
  year: 2003
  end-page: 5251
  ident: CR41
  article-title: Predicted correspondence between species abundances and dendrograms of niche similarities
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0831096100
– volume: 123
  start-page: 721
  year: 2014
  end-page: 728
  ident: CR28
  article-title: Invasions cause biodiversity loss and community simplification in vertebrate food webs
  publication-title: Oikos
  doi: 10.1111/j.1600-0706.2013.00859.x
– volume: 33
  start-page: 924
  year: 2006
  end-page: 935
  ident: CR61
  article-title: A new algorithm to calculate the nestedness temperature of presence–absence matrices
  publication-title: J. Biogeogr.
  doi: 10.1111/j.1365-2699.2006.01444.x
– volume: 78
  start-page: 81
  year: 1997
  end-page: 92
  ident: CR16
  article-title: Community invasibility, recruitment limitation, and grassland biodiversity
  publication-title: Ecology
  doi: 10.1890/0012-9658(1997)078[0081:CIRLAG]2.0.CO;2
– volume: 110
  start-page: 14296
  year: 2013
  end-page: 14301
  ident: CR50
  article-title: Soil food web properties explain ecosystem services across European land use systems
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1305198110
– volume: 9
  start-page: 244
  year: 2011
  end-page: 253
  ident: CR2
  article-title: The skin microbiome
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/nrmicro2537
– ident: CR17
– volume: 15
  start-page: 291
  year: 2012
  end-page: 300
  ident: CR24
  article-title: More than a meal… integrating non-feeding interactions into food webs
  publication-title: Ecol. Lett.
  doi: 10.1111/j.1461-0248.2011.01732.x
– volume: 180
  start-page: 4325
  year: 1998
  end-page: 4331
  ident: CR54
  article-title: Parallel and divergent genotypic evolution in experimental populations of Ralstonia sp
  publication-title: J. Bacteriol.
– volume: 49
  start-page: 257
  year: 2005
  end-page: 264
  ident: CR19
  article-title: Effects of microbial community diversity on the survival of in the wheat rhizosphere
  publication-title: Microb. Ecol.
  doi: 10.1007/s00248-004-0179-3
– volume: 2
  start-page: 589
  year: 2011
  ident: CR48
  article-title: Competitive and cooperative metabolic interactions in bacterial communities
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms1597
– volume: 96
  start-page: 915
  year: 2015
  end-page: 926
  ident: CR36
  article-title: Resource pulses can alleviate the biodiversity-invasion relationship in soil microbial communities
  publication-title: Ecology
  doi: 10.1890/14-1001.1
– volume: 27
  start-page: 282
  year: 2013
  end-page: 288
  ident: CR62
  article-title: Niche dimensionality links biodiversity and invasibility of microbial communities
  publication-title: Funct. Ecol.
  doi: 10.1111/j.1365-2435.2012.02060.x
– volume: 14
  start-page: 537
  year: 2011
  end-page: 545
  ident: CR45
  article-title: Genotypic richness and dissimilarity opposingly affect ecosystem functioning
  publication-title: Ecol. Lett.
  doi: 10.1111/j.1461-0248.2011.01613.x
– volume: 31
  start-page: 2913
  year: 2014
  end-page: 2928
  ident: CR55
  article-title: Multihost experimental evolution of the pathogen unveils genes involved in adaptation to plants
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msu229
– volume: 79
  start-page: 59
  year: 1992
  end-page: 65
  ident: CR58
  article-title: DNA extraction for 16S rRNA gene analysis to determine genetic diversity in deep sediment communities
  publication-title: FEMS Microbiol. Lett.
  doi: 10.1111/j.1574-6968.1992.tb05682.x
– volume: 336
  start-page: 1255
  year: 2012
  ident: BFncomms9413_CR1
  publication-title: Science
  doi: 10.1126/science.1224203
– volume: 16
  start-page: 650
  year: 2013
  ident: BFncomms9413_CR37
  publication-title: Ecol. Lett.
  doi: 10.1111/ele.12093
– volume: 28
  start-page: 274
  year: 2015
  ident: BFncomms9413_CR52
  publication-title: Mol. Plant Microbe Interact.
  doi: 10.1094/MPMI-10-14-0331-FI
– volume: 68
  start-page: 4383
  year: 2002
  ident: BFncomms9413_CR34
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.68.9.4383-4389.2002
– volume: 87
  start-page: 9610
  year: 1990
  ident: BFncomms9413_CR11
  publication-title: Proc. Natl. Acad. Sci.
  doi: 10.1073/pnas.87.24.9610
– volume: 49
  start-page: 257
  year: 2005
  ident: BFncomms9413_CR19
  publication-title: Microb. Ecol.
  doi: 10.1007/s00248-004-0179-3
– volume: 2
  start-page: 589
  year: 2011
  ident: BFncomms9413_CR48
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms1597
– volume: 417
  start-page: 636
  year: 2002
  ident: BFncomms9413_CR12
  publication-title: Nature
  doi: 10.1038/nature00776
– ident: BFncomms9413_CR17
  doi: 10.2307/3546992
– volume: 34
  start-page: 27
  year: 2006
  ident: BFncomms9413_CR18
  publication-title: Appl. Soil Ecol.
  doi: 10.1016/j.apsoil.2005.12.003
– volume: 364
  start-page: 1743
  year: 2009
  ident: BFncomms9413_CR26
  publication-title: Philos. Trans. R. Soc. Lond. B Biol. Sci.
  doi: 10.1098/rstb.2008.0286
– volume: 332
  start-page: 1097
  year: 2011
  ident: BFncomms9413_CR7
  publication-title: Science
  doi: 10.1126/science.1203980
– volume: 91
  start-page: 3123
  year: 2010
  ident: BFncomms9413_CR49
  publication-title: Ecology
  doi: 10.1890/09-2219.1
– volume: 488
  start-page: 86
  year: 2012
  ident: BFncomms9413_CR3
  publication-title: Nature
  doi: 10.1038/nature11237
– volume: 286
  start-page: 1577
  year: 1999
  ident: BFncomms9413_CR13
  publication-title: Science
  doi: 10.1126/science.286.5444.1577
– volume: 4
  start-page: 752
  year: 2010
  ident: BFncomms9413_CR4
  publication-title: ISME J.
  doi: 10.1038/ismej.2010.5
– volume: 14
  start-page: 537
  year: 2011
  ident: BFncomms9413_CR45
  publication-title: Ecol. Lett.
  doi: 10.1111/j.1461-0248.2011.01613.x
– volume: 48
  start-page: 152
  year: 2011
  ident: BFncomms9413_CR32
  publication-title: Appl. Soil Ecol.
  doi: 10.1016/j.apsoil.2011.03.013
– volume: 96
  start-page: 915
  year: 2015
  ident: BFncomms9413_CR36
  publication-title: Ecology
  doi: 10.1890/14-1001.1
– volume: 334
  start-page: 670
  year: 2011
  ident: BFncomms9413_CR6
  publication-title: Science
  doi: 10.1126/science.1212782
– volume: 100
  start-page: 5246
  year: 2003
  ident: BFncomms9413_CR41
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0831096100
– volume: 15
  start-page: 291
  year: 2012
  ident: BFncomms9413_CR24
  publication-title: Ecol. Lett.
  doi: 10.1111/j.1461-0248.2011.01732.x
– volume: 147
  start-page: 995
  year: 2001
  ident: BFncomms9413_CR53
  publication-title: Microbiology
  doi: 10.1099/00221287-147-4-995
– volume: 405
  start-page: 228
  year: 2000
  ident: BFncomms9413_CR20
  publication-title: Nature
  doi: 10.1038/35012234
– volume: 288
  start-page: 852
  year: 2000
  ident: BFncomms9413_CR14
  publication-title: Science
  doi: 10.1126/science.288.5467.852
– volume: 78
  start-page: 81
  year: 1997
  ident: BFncomms9413_CR16
  publication-title: Ecology
  doi: 10.1890/0012-9658(1997)078[0081:CIRLAG]2.0.CO;2
– volume: 153
  start-page: 2630
  year: 2007
  ident: BFncomms9413_CR29
  publication-title: Microbiology
  doi: 10.1099/mic.0.2006/001453-0
– volume: 65
  start-page: 1339
  year: 1984
  ident: BFncomms9413_CR21
  publication-title: Ecology
  doi: 10.2307/1939114
– volume: 8
  start-page: 1291
  year: 2005
  ident: BFncomms9413_CR10
  publication-title: Ecol. Lett.
  doi: 10.1111/j.1461-0248.2005.00828.x
– volume: 65
  start-page: 278
  year: 2013
  ident: BFncomms9413_CR31
  publication-title: Biol. Control
  doi: 10.1016/j.biocontrol.2012.12.010
– volume: 180
  start-page: 4325
  year: 1998
  ident: BFncomms9413_CR54
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.180.17.4325-4331.1998
– volume: 182
  start-page: 1215
  year: 2000
  ident: BFncomms9413_CR60
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.182.5.1215-1225.2000
– volume: 345
  start-page: 1253497
  year: 2014
  ident: BFncomms9413_CR25
  publication-title: Science
  doi: 10.1126/science.1253497
– volume: 41
  start-page: 455
  year: 2003
  ident: BFncomms9413_CR30
  publication-title: Annu. Rev. Phytopathol.
  doi: 10.1146/annurev.phyto.41.052002.095652
– volume: 101
  start-page: 10854
  year: 2004
  ident: BFncomms9413_CR35
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0403458101
– volume: 7
  start-page: 202
  year: 2014
  ident: BFncomms9413_CR33
  publication-title: J. Plant Ecol
  doi: 10.1093/jpe/rtt020
– volume: 8
  start-page: 790
  year: 2014
  ident: BFncomms9413_CR51
  publication-title: ISME J.
  doi: 10.1038/ismej.2013.196
– volume: 119
  start-page: 1970
  year: 2010
  ident: BFncomms9413_CR23
  publication-title: Oikos
  doi: 10.1111/j.1600-0706.2010.18557.x
– volume: 43
  start-page: 83
  year: 2005
  ident: BFncomms9413_CR56
  publication-title: Annu. Rev. Phytopathol.
  doi: 10.1146/annurev.phyto.43.113004.133839
– volume: 321
  start-page: 341
  year: 2009
  ident: BFncomms9413_CR47
  publication-title: Plant Soil
  doi: 10.1007/s11104-008-9568-6
– volume: 109
  start-page: 1159
  year: 2012
  ident: BFncomms9413_CR9
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1109326109
– volume: 33
  start-page: 924
  year: 2006
  ident: BFncomms9413_CR61
  publication-title: J. Biogeogr.
  doi: 10.1111/j.1365-2699.2006.01444.x
– volume: 110
  start-page: 14296
  year: 2013
  ident: BFncomms9413_CR50
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1305198110
– volume: 9
  start-page: 244
  year: 2011
  ident: BFncomms9413_CR2
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/nrmicro2537
– volume: 16
  start-page: 807
  year: 2013
  ident: BFncomms9413_CR8
  publication-title: Ecol. Lett.
  doi: 10.1111/ele.12099
– volume: 17
  start-page: 478
  year: 2012
  ident: BFncomms9413_CR5
  publication-title: Trends Plant Sci.
  doi: 10.1016/j.tplants.2012.04.001
– volume: 20
  start-page: 246
  year: 2014
  ident: BFncomms9413_CR43
  publication-title: Nat. Med.
  doi: 10.1038/nm.3492
– ident: BFncomms9413_CR39
  doi: 10.2307/1935352
– volume: 63
  start-page: 541
  year: 2009
  ident: BFncomms9413_CR44
  publication-title: Annu. Rev. Microbiol.
  doi: 10.1146/annurev.micro.62.081307.162918
– volume: 4
  start-page: 81
  year: 2013
  ident: BFncomms9413_CR46
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2013.00081
– volume: 27
  start-page: 282
  year: 2013
  ident: BFncomms9413_CR62
  publication-title: Funct. Ecol.
  doi: 10.1111/j.1365-2435.2012.02060.x
– volume: 16
  start-page: 853
  year: 2013
  ident: BFncomms9413_CR40
  publication-title: Ecol. Lett.
  doi: 10.1111/ele.12118
– volume: 4
  start-page: 1383
  year: 2013
  ident: BFncomms9413_CR42
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms2392
– volume: 6
  start-page: 1109
  year: 2003
  ident: BFncomms9413_CR38
  publication-title: Ecol. Lett.
  doi: 10.1046/j.1461-0248.2003.00530.x
– volume: 31
  start-page: 2913
  year: 2014
  ident: BFncomms9413_CR55
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msu229
– volume: 2
  start-page: 36
  year: 2014
  ident: BFncomms9413_CR27
  publication-title: Front. Ecol. Evol.
  doi: 10.3389/fevo.2014.00036
– volume: 123
  start-page: 721
  year: 2014
  ident: BFncomms9413_CR28
  publication-title: Oikos
  doi: 10.1111/j.1600-0706.2013.00859.x
– volume: 79
  start-page: 59
  year: 1992
  ident: BFncomms9413_CR58
  publication-title: FEMS Microbiol. Lett.
  doi: 10.1111/j.1574-6968.1992.tb05682.x
– volume: 8
  start-page: 15
  year: 2010
  ident: BFncomms9413_CR57
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/nrmicro2259
– volume: 100
  start-page: 597
  year: 2012
  ident: BFncomms9413_CR63
  publication-title: J. Ecol.
  doi: 10.1111/j.1365-2745.2011.01940.x
– volume: 2
  start-page: 286
  year: 1999
  ident: BFncomms9413_CR15
  publication-title: Ecol. Lett.
  doi: 10.1046/j.1461-0248.1999.00083.x
– volume: 87
  start-page: 1
  year: 1999
  ident: BFncomms9413_CR59
  publication-title: J. Ecol.
  doi: 10.1046/j.1365-2745.1999.00321.x
– volume: 329
  start-page: 853
  year: 2010
  ident: BFncomms9413_CR22
  publication-title: Science
  doi: 10.1126/science.1188321
SSID ssj0000391844
Score 2.6297095
Snippet Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical...
SourceID pubmedcentral
proquest
pubmed
crossref
springer
SourceType Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 8413
SubjectTerms 631/326/2565
631/326/421
631/449/2668
Animal behavior
Bacteria
Competition
Consumers
Consumption
Disease Resistance - physiology
Host plants
Humanities and Social Sciences
Laboratories
Microbial Interactions - physiology
Microbiota - physiology
Microcosms
multidisciplinary
Niche overlap
Pathogens
Plant diseases
Plant Diseases - microbiology
Plant Roots - microbiology
Ralstonia solanacearum - physiology
Rhizosphere
Science
Science (multidisciplinary)
Soil Microbiology
Solanum lycopersicum - microbiology
Success
Tomatoes
Virulence
SummonAdditionalLinks – databaseName: Health & Medical Collection
  dbid: 7X7
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1Lb9QwEB5BERIXxJtAQUb0wsHqbmyvnRNCiKriwKmV9hb5MVZXKs62u0Xi3zNOnLTLIm6RPXKszNj-MjP-BuDIa2HjTETuhfVceu-5a3TNvXPR6SZmUJKzLX4sTs_l96VaFofbpqRVjntiv1GHzmcf-fFc08Hb10_6vL7iuWpUjq6WEhr34UGmLsspXXqpJx9LZj83Uo6spMIcJxry56aRc7F7Du2By_0cyb8Cpf35c_IEHhfgyL4Mmn4K9zA9g4dDKcnfz2Fzdt2tL1aepSGvm92NELAuMkLIW26LMjAwN9A005B-uCOSmVVZKNkx9JhrFXdkXmyVftnsU2M2Bba-JFWw4fbkCzg_-Xb29ZSXggrcEw7b8jlap6IzEqOkBmUx6qbWM7RR2jqgoY1PYY0LpxSpUGB0mNleQrOwxhsrXsJB6hK-Bqbj3AplrVkElKiCm5koPc4CteoYTQWfxs_b-sI2noteXLZ91FuY9lYVFXycZNcDx8Y_pQ5HLbVlnW3aW6uo4MPUTSskhz1swu6ml6F_pkxKU8GrQanTawgOZhayugK9o-5JILNv7_ak1UXPwi1VY-jPpIKj0TDuTGtv9m_-P_u38IiQmOJ9uOsQDrbXN_iO0M7Wve9N-g_sswj0
  priority: 102
  providerName: ProQuest
– databaseName: SpringerOpen Free (Free internet resource, activated by CARLI)
  dbid: C6C
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwjV3BTtwwEB0hEFIvFS20DYXKCC49WN1N7Ng5VisQ6qEnkLhFtjMWK1FnxS5I_D3jOEl32R56S-JJYnnG9rNn_AbgwqnC-EnhuSuM48I5x22lcu6s9VZVPoKSGG3xu7y-Fb_u5F1Pk7PswyoTpWU3TA_RYT8C3f1ZViImqN2LlO3RmmflbNxPiUznWoiBgbTQa69szjlbQHI7HvKNU7Sba64O4H0PEtnPVK0PsIPhI-yntJEvh7C8eWwX93PHQorhZuveANZ6Rmh4xU3f8NgwmyiZ6ZMunQeJLKqs6SNh6DLmJW7JlNg8PJu4f8ZMaNjigZqdpZOSR3B7dXkzu-Z98gTuCHOt-BSNld5qgV7QA2nQqypXEzRemLxBTYOcxBxLKyWpq0BvMTK7NFVptNOm-AS7oQ34BZjyU1NIY3TZoEDZ2In2wuGkoafKe53B96F5a9czi8cEFw915-EudP1XFRmcj7KLxKfxT6mTQUt136eW9VQR9OoyaGVwNhZTb4guDhOwfepkaH0UCWgy-JyUOv6GoF9kHMszUBvqHgUi0_ZmSZjfd4zbQlaaViEZXAyGsVatrdof_5_YV3hH6EvyzsV1Arurxyc8JYSzst86034F4v4FLA
  priority: 102
  providerName: Springer Nature
Title Trophic network architecture of root-associated bacterial communities determines pathogen invasion and plant health
URI https://link.springer.com/article/10.1038/ncomms9413
https://www.ncbi.nlm.nih.gov/pubmed/26400552
https://www.proquest.com/docview/1715918690
https://www.proquest.com/docview/1717474815
https://pubmed.ncbi.nlm.nih.gov/PMC4598729
Volume 6
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV3Pb9MwFH4am5C4IH6TMSojduFg6BI7dg4IlWplqsSEYJV6i2zH1iqVpLTdxP57nu2krHQnLklkv8SWv-f42c_-HsCxEZly_cxRkylDmTGG6kKk1GjttCicN0r8bovz_GzCxlM-3YMufmfbgKs7p3Y-ntRkOX__-9fNJ-zwH-ORcfmhRmx-rgrmg9ce4IgkfAf92pr54Y-cFTiRYR076dYrng04Z56KKt0emnbszd1tk__4TsOQNHoED1tbkgwi-I9hz9ZP4H6MLnnzFFYXy2ZxOTOkjlu9yW2nAWkcQaN5TVWLj62IjszN-EkTj414slVStRtm8NGHL25Q48isvlZ-mY2ouiKLOaJD4oHKZzAZnV4Mz2gbY4EaNM3W9MQqzZ2WzDqGCVxZJ4pU9K1yTKWVlfgv5Da1ueYcUc2s09YTwFRFrqSRKnsO-3VT25dAhDtRGVdK5pVllle6Lx0ztl9hqnBOJvCua97StATkPg7GvAyO8EyWf1FJ4O1GdhFpN-6UOupQKjvNKRF-XoRAWwm82WRjp_GeEFXb5irI4DTK89Qk8CKCuimm04YExBbcGwFPyL2dU88uAzE344XEyUoCx51i3KrWTu0P_7uAV_AA7TZOg3PsCPbXyyv7Gm2jte7BPTEVeJWjLz04GAzGP8Z4_3x6_u07pg7zYS-sOvRCB_kDMSwftw
linkProvider Scholars Portal
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV3NbtQwEB6VIgQXVP5KoIAR5cDBajax184BVQiotrT0tJX2FmzHVlcqztLdtupL8YyM4yTtsohbb5E9cmzPjD32jL8B2DYiVy7NHTW5MpQZY6guREaN1k6LwgWjJERbHA1Hx-zbhE_W4Hf3FiaEVXZrYrNQV7UJd-Q7A4Ebb5M_aXf2i4asUcG72qXQiGJxYK8u8cg2_7j_Bfn7Psv2vo4_j2ibVYAaNEYWdGCV5k5LZh3DAq6sE0UmUqscU1llJWo_t5kdas5xHLl12gbIk6oYKmmkyrHdO3AXN940aJSYiP5OJ6CtS8Y6FNRc7ngcws95wQb58r63YsyuxmT-5Zht9ru9DXjYGqrkU5SsR7Bm_WO4F1NXXj2B-fisnp1MDfExjpzc9EiQ2hG0yBdUtcy3FdERFhqbNPFNSkByJVUbjYOfITdyjeJMpv5ChTs8onxFZqfIehJfaz6F41uZ6mew7mtvnwMRbqByrpQcVpZZXulUOmZsWmGpcE4m8KGb3tK06OYhycZp2XjZc1lesyKBdz3tLGJ6_JNqq-NS2er1vLyWwgTe9tWokcHNorytzxsaPKMFEJwENiNT-9-g-RlQz7IExBK7e4KA9r1c46cnDeo344XEk1AC251g3OjWSu9f_L_3b-D-aPz9sDzcPzp4CQ_QCuS0cbVtwfri7Ny-QktroV834k3gx23r0x-SLEeL
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1LbxMxEB6VIhAXVF5loYAR5cDBSnZtx94DqhAlaimqOLRSboufaqSyG5q0Vf8av47xvtoQxK23lT3y2p4Ze-wZfwOwbSXTYcgCtUxbyq211OQyo9aYYGQeolESoy0OR3vH_OtETNbgd_cWJoZVdmtivVC7ysY78kEqceOt8ycNQhsW8X13vDP7RWMGqehp7dJpNCJy4K8u8fg2_7i_i7x-n2XjL0ef92ibYYBaNEwWNPXaiGAU94FjgdA-yDyTQ68D15nzClcC4TM_MkLgmJgPxkf4E5ePtLJKM2z3DtyVTKRRx-RE9vc7EXldcd4hojI1KHE4P-c5T9nyHrhi2K7GZ_7lpK33vvEGPGyNVvKpkbJHsObLx3CvSWN59QTmR2fV7GRqSdnElJOb3glSBYLW-YLqVhC8I6aBiMYmbfM-JaK6EtdG5uBnzJNcoWiTaXmh430e0aUjs1MUA9K83HwKx7cy1c9gvaxK_xyIDKlmQms1cp574cxQBW790GGpDEEl8KGb3sK2SOcx4cZpUXvcmSquWZHAu5521uB7_JNqq-NS0er4vLiWyATe9tWondHloktfndc0eF6LgDgJbDZM7X-DpmhEQMsSkEvs7gki8vdyTTk9qRHAucgVnooS2O4E40a3Vnr_4v-9fwP3UZOKb_uHBy_hARqEgtZety1YX5yd-1dodC3M61q6Cfy4bXX6AypiS8E
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Trophic+network+architecture+of+root-associated+bacterial+communities+determines+pathogen+invasion+and+plant+health&rft.jtitle=Nature+communications&rft.au=Wei%2C+Zhong&rft.au=Yang%2C+Tianjie&rft.au=Friman%2C+Ville-Petri&rft.au=Xu%2C+Yangchun&rft.date=2015-09-24&rft.pub=Nature+Pub.+Group&rft.eissn=2041-1723&rft.volume=6&rft_id=info:doi/10.1038%2Fncomms9413&rft_id=info%3Apmid%2F26400552&rft.externalDocID=PMC4598729
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2041-1723&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2041-1723&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2041-1723&client=summon