Systematic review with meta-analysis of the accuracy of diagnostic tests for COVID-19

•RT-PCR followed by CT shows high sensitivity for detecting COVID-19.•Immunological tests should use a combination of IgG and IgM.•The genes E and RdRp present high analytical sensitivity to detect the virus.•Assays for molecular diagnosis should employ 2-target systems.•Studies of diagnostic tests...

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Published inAmerican journal of infection control Vol. 49; no. 1; pp. 21 - 29
Main Authors Böger, Beatriz, Fachi, Mariana M., Vilhena, Raquel O., Cobre, Alexandre F., Tonin, Fernanda S., Pontarolo, Roberto
Format Journal Article
LanguageEnglish
Published United States Elsevier Inc 01.01.2021
Association for Professionals in Infection Control and Epidemiology, Inc. Published by Elsevier Inc
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Online AccessGet full text
ISSN0196-6553
1527-3296
1527-3296
DOI10.1016/j.ajic.2020.07.011

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Abstract •RT-PCR followed by CT shows high sensitivity for detecting COVID-19.•Immunological tests should use a combination of IgG and IgM.•The genes E and RdRp present high analytical sensitivity to detect the virus.•Assays for molecular diagnosis should employ 2-target systems.•Studies of diagnostic tests for COVID-19 are of moderate methodological quality. To collate the evidence on the accuracy parameters of all available diagnostic methods for detecting SARS-CoV-2. A systematic review with meta-analysis was performed. Searches were conducted in Pubmed and Scopus (April 2020). Studies reporting data on sensitivity or specificity of diagnostic tests for COVID-19 using any human biological sample were included. Sixteen studies were evaluated. Meta-analysis showed that computed tomography has high sensitivity (91.9% [89.8%-93.7%]), but low specificity (25.1% [21.0%-29.5%]). The combination of IgM and IgG antibodies demonstrated promising results for both parameters (84.5% [82.2%-86.6%]; 91.6% [86.0%-95.4%], respectively). For RT-PCR tests, rectal stools/swab, urine, and plasma were less sensitive while sputum (97.2% [90.3%-99.7%]) presented higher sensitivity for detecting the virus. RT-PCR remains the gold standard for the diagnosis of COVID-19 in sputum samples. However, the combination of different diagnostic tests is highly recommended to achieve adequate sensitivity and specificity.
AbstractList •RT-PCR followed by CT shows high sensitivity for detecting COVID-19.•Immunological tests should use a combination of IgG and IgM.•The genes E and RdRp present high analytical sensitivity to detect the virus.•Assays for molecular diagnosis should employ 2-target systems.•Studies of diagnostic tests for COVID-19 are of moderate methodological quality. To collate the evidence on the accuracy parameters of all available diagnostic methods for detecting SARS-CoV-2. A systematic review with meta-analysis was performed. Searches were conducted in Pubmed and Scopus (April 2020). Studies reporting data on sensitivity or specificity of diagnostic tests for COVID-19 using any human biological sample were included. Sixteen studies were evaluated. Meta-analysis showed that computed tomography has high sensitivity (91.9% [89.8%-93.7%]), but low specificity (25.1% [21.0%-29.5%]). The combination of IgM and IgG antibodies demonstrated promising results for both parameters (84.5% [82.2%-86.6%]; 91.6% [86.0%-95.4%], respectively). For RT-PCR tests, rectal stools/swab, urine, and plasma were less sensitive while sputum (97.2% [90.3%-99.7%]) presented higher sensitivity for detecting the virus. RT-PCR remains the gold standard for the diagnosis of COVID-19 in sputum samples. However, the combination of different diagnostic tests is highly recommended to achieve adequate sensitivity and specificity.
To collate the evidence on the accuracy parameters of all available diagnostic methods for detecting SARS-CoV-2.OBJECTIVETo collate the evidence on the accuracy parameters of all available diagnostic methods for detecting SARS-CoV-2.A systematic review with meta-analysis was performed. Searches were conducted in Pubmed and Scopus (April 2020). Studies reporting data on sensitivity or specificity of diagnostic tests for COVID-19 using any human biological sample were included.METHODSA systematic review with meta-analysis was performed. Searches were conducted in Pubmed and Scopus (April 2020). Studies reporting data on sensitivity or specificity of diagnostic tests for COVID-19 using any human biological sample were included.Sixteen studies were evaluated. Meta-analysis showed that computed tomography has high sensitivity (91.9% [89.8%-93.7%]), but low specificity (25.1% [21.0%-29.5%]). The combination of IgM and IgG antibodies demonstrated promising results for both parameters (84.5% [82.2%-86.6%]; 91.6% [86.0%-95.4%], respectively). For RT-PCR tests, rectal stools/swab, urine, and plasma were less sensitive while sputum (97.2% [90.3%-99.7%]) presented higher sensitivity for detecting the virus.RESULTSSixteen studies were evaluated. Meta-analysis showed that computed tomography has high sensitivity (91.9% [89.8%-93.7%]), but low specificity (25.1% [21.0%-29.5%]). The combination of IgM and IgG antibodies demonstrated promising results for both parameters (84.5% [82.2%-86.6%]; 91.6% [86.0%-95.4%], respectively). For RT-PCR tests, rectal stools/swab, urine, and plasma were less sensitive while sputum (97.2% [90.3%-99.7%]) presented higher sensitivity for detecting the virus.RT-PCR remains the gold standard for the diagnosis of COVID-19 in sputum samples. However, the combination of different diagnostic tests is highly recommended to achieve adequate sensitivity and specificity.CONCLUSIONSRT-PCR remains the gold standard for the diagnosis of COVID-19 in sputum samples. However, the combination of different diagnostic tests is highly recommended to achieve adequate sensitivity and specificity.
To collate the evidence on the accuracy parameters of all available diagnostic methods for detecting SARS-CoV-2. A systematic review with meta-analysis was performed. Searches were conducted in Pubmed and Scopus (April 2020). Studies reporting data on sensitivity or specificity of diagnostic tests for COVID-19 using any human biological sample were included. Sixteen studies were evaluated. Meta-analysis showed that computed tomography has high sensitivity (91.9% [89.8%-93.7%]), but low specificity (25.1% [21.0%-29.5%]). The combination of IgM and IgG antibodies demonstrated promising results for both parameters (84.5% [82.2%-86.6%]; 91.6% [86.0%-95.4%], respectively). For RT-PCR tests, rectal stools/swab, urine, and plasma were less sensitive while sputum (97.2% [90.3%-99.7%]) presented higher sensitivity for detecting the virus. RT-PCR remains the gold standard for the diagnosis of COVID-19 in sputum samples. However, the combination of different diagnostic tests is highly recommended to achieve adequate sensitivity and specificity.
Author Böger, Beatriz
Cobre, Alexandre F.
Vilhena, Raquel O.
Tonin, Fernanda S.
Fachi, Mariana M.
Pontarolo, Roberto
Author_xml – sequence: 1
  givenname: Beatriz
  surname: Böger
  fullname: Böger, Beatriz
  organization: Pharmaceutical Sciences Postgraduate Program, Health Sciences Sector, Federal University of Paraná, Curitiba, Brazil
– sequence: 2
  givenname: Mariana M.
  surname: Fachi
  fullname: Fachi, Mariana M.
  organization: Pharmaceutical Sciences Postgraduate Program, Health Sciences Sector, Federal University of Paraná, Curitiba, Brazil
– sequence: 3
  givenname: Raquel O.
  surname: Vilhena
  fullname: Vilhena, Raquel O.
  organization: Department of Pharmacy, Federal University of Paraná, Curitiba, Brazil
– sequence: 4
  givenname: Alexandre F.
  surname: Cobre
  fullname: Cobre, Alexandre F.
  organization: Pharmaceutical Sciences Postgraduate Program, Health Sciences Sector, Federal University of Paraná, Curitiba, Brazil
– sequence: 5
  givenname: Fernanda S.
  surname: Tonin
  fullname: Tonin, Fernanda S.
  organization: Pharmaceutical Sciences Postgraduate Program, Health Sciences Sector, Federal University of Paraná, Curitiba, Brazil
– sequence: 6
  givenname: Roberto
  surname: Pontarolo
  fullname: Pontarolo, Roberto
  email: pontarolo@ufpr.br
  organization: Department of Pharmacy, Federal University of Paraná, Curitiba, Brazil
BackLink https://www.ncbi.nlm.nih.gov/pubmed/32659413$$D View this record in MEDLINE/PubMed
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Keywords Evidence
SARS-CoV-2
Sensitivity
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Coronavirus
Language English
License Copyright © 2020 Association for Professionals in Infection Control and Epidemiology, Inc. Published by Elsevier Inc. All rights reserved.
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Snippet •RT-PCR followed by CT shows high sensitivity for detecting COVID-19.•Immunological tests should use a combination of IgG and IgM.•The genes E and RdRp present...
To collate the evidence on the accuracy parameters of all available diagnostic methods for detecting SARS-CoV-2. A systematic review with meta-analysis was...
To collate the evidence on the accuracy parameters of all available diagnostic methods for detecting SARS-CoV-2.OBJECTIVETo collate the evidence on the...
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SubjectTerms Antibodies, Viral - immunology
Coronavirus
Coronavirus Envelope Proteins - genetics
Coronavirus RNA-Dependent RNA Polymerase - genetics
COVID-19 - diagnosis
COVID-19 - immunology
COVID-19 Nucleic Acid Testing
COVID-19 Serological Testing
COVID-19 Testing
Evidence
Humans
Immunoglobulin G - immunology
Immunoglobulin M - immunology
Lung - diagnostic imaging
Major
SARS-CoV-2
SARS-CoV-2 - genetics
SARS-CoV-2 - immunology
Sensitivity
Sensitivity and Specificity
Specificity
Tomography, X-Ray Computed
Title Systematic review with meta-analysis of the accuracy of diagnostic tests for COVID-19
URI https://www.clinicalkey.com/#!/content/1-s2.0-S0196655320306933
https://dx.doi.org/10.1016/j.ajic.2020.07.011
https://www.ncbi.nlm.nih.gov/pubmed/32659413
https://www.proquest.com/docview/2423804351
https://pubmed.ncbi.nlm.nih.gov/PMC7350782
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