Highly pathogenic avian influenza virus H5N1 clade 2.3.4.4b in wild rats in Egypt during 2023
We detected highly pathogenic avian influenza A(H5N1) virus in wild rats collected from a rural area in Giza, Egypt, near poultry farms, markets, and backyard flocks. Sequence and phylogenetic analyses indicated that the virus from the rats belonged to clade 2.3.4.4b, which has been the predominant...
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| Published in | Emerging microbes & infections Vol. 13; no. 1; p. 2396874 |
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| Main Authors | , , , , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
United States
Taylor & Francis Ltd
01.12.2024
Taylor & Francis Taylor & Francis Group |
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| Abstract | We detected highly pathogenic avian influenza A(H5N1) virus in wild rats collected from a rural area in Giza, Egypt, near poultry farms, markets, and backyard flocks. Sequence and phylogenetic analyses indicated that the virus from the rats belonged to clade 2.3.4.4b, which has been the predominant virus genotype circulating in Egypt and worldwide since 2021-2022. Active surveillance of avian influenza viruses in wild and domestic mammals is recommended to prevent further spread to mammals and humans. |
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| AbstractList | We detected highly pathogenic avian influenza A(H5N1) virus in wild rats collected from a rural area in Giza, Egypt, near poultry farms, markets, and backyard flocks. Sequence and phylogenetic analyses indicated that the virus from the rats belonged to clade 2.3.4.4b, which has been the predominant virus genotype circulating in Egypt and worldwide since 2021-2022. Active surveillance of avian influenza viruses in wild and domestic mammals is recommended to prevent further spread to mammals and humans.We detected highly pathogenic avian influenza A(H5N1) virus in wild rats collected from a rural area in Giza, Egypt, near poultry farms, markets, and backyard flocks. Sequence and phylogenetic analyses indicated that the virus from the rats belonged to clade 2.3.4.4b, which has been the predominant virus genotype circulating in Egypt and worldwide since 2021-2022. Active surveillance of avian influenza viruses in wild and domestic mammals is recommended to prevent further spread to mammals and humans. We detected highly pathogenic avian influenza A(H5N1) virus in wild rats collected from a rural area in Giza, Egypt, near poultry farms, markets, and backyard flocks. Sequence and phylogenetic analyses indicated that the virus from the rats belonged to clade 2.3.4.4b, which has been the predominant virus genotype circulating in Egypt and worldwide since 2021-2022. Active surveillance of avian influenza viruses in wild and domestic mammals is recommended to prevent further spread to mammals and humans. |
| Author | El-Shesheny, Rabeh Webby, Richard J. Kamel, Mina Nabil Ali, Mohamed Ahmed Moatasim, Yassmin El Sayes, Mohamed McKenzie, Pamela P. Kandeil, Ahmed Gomaa, Mokhtar El Taweel, Ahmed Kutkat, Omnia GabAllah, Mohamed Kayali, Ghazi |
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| Cites_doi | 10.3390/pathogens12010036 10.1128/mr.56.1.152-179.1992 10.1038/s41467-023-41182-0 10.1016/j.lana.2024.100785 10.2807/1560-7917.ES.2023.28.31.2300366 10.1080/22221751.2023.2270068 10.3201/eid3007.240508 10.3201/eid2907.221149 10.1016/j.jim.2014.03.023 10.1038/s44298-024-00039-z 10.1038/s41586-023-06631-2 10.1371/journal.ppat.1002186 10.1126/science.aaf8852 10.1080/01652176.2017.1325537 10.1371/journal.ppat.1000252 10.1016/S0378-1135(00)00174-7 |
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| Snippet | We detected highly pathogenic avian influenza A(H5N1) virus in wild rats collected from a rural area in Giza, Egypt, near poultry farms, markets, and backyard... |
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| SubjectTerms | Amino acids Animals Animals, Wild - virology Antibodies Avian flu Birds Dairy cattle egypt Egypt - epidemiology Emerging Seasonal and Pandemic Influenza Infections Genes Genomes Genotype HPAI Infections Influenza Influenza A Virus, H5N1 Subtype - classification Influenza A Virus, H5N1 Subtype - genetics Influenza A Virus, H5N1 Subtype - isolation & purification Influenza A Virus, H5N1 Subtype - pathogenicity Influenza in Birds - epidemiology Influenza in Birds - virology Orthomyxoviridae Infections - epidemiology Orthomyxoviridae Infections - veterinary Orthomyxoviridae Infections - virology Phylogenetics Phylogeny Poultry rat Rats - virology Research centers Research Letter surveillance Viruses |
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| Title | Highly pathogenic avian influenza virus H5N1 clade 2.3.4.4b in wild rats in Egypt during 2023 |
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