Evidence of Uncultivated Bacteria in the Adult Female Bladder
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| Published in | Journal of Clinical Microbiology Vol. 50; no. 4; pp. 1376 - 1383 |
|---|---|
| Main Authors | , , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
Washington, DC
American Society for Microbiology
01.04.2012
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| Subjects | |
| Online Access | Get full text |
| ISSN | 0095-1137 1098-660X 1098-660X |
| DOI | 10.1128/JCM.05852-11 |
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202.737.3600 • 202.942.9355 fax • journals@asmusa.org
Print ISSN:
0095-1137
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1098-660X
Copyright © 2014
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American Society for Microbiology.
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Clinical urine specimens are usually considered to be sterile when they do not yield uropathogens using standard clinical cultivation procedures. Our aim was to test if the adult female bladder might contain bacteria that are not identified by these routine procedures. An additional aim was to identify and recommend the appropriate urine collection method for the study of bacterial communities in the female bladder. Consenting participants who were free of known urinary tract infection provided urine samples by voided, transurethral, and/or suprapubic collection methods. The presence of bacteria in these samples was assessed by bacterial culture, light microscopy, and 16S rRNA gene sequencing. Bacteria that are not or cannot be routinely cultivated (hereinafter called uncultivated bacteria) were common in voided urine, urine collected by transurethral catheter (TUC), and urine collected by suprapubic aspirate (SPA), regardless of whether the subjects had urinary symptoms. Voided urine samples contained mixtures of urinary and genital tract bacteria. Communities identified in parallel urine samples collected by TUC and SPA were similar. Uncultivated bacteria are clearly present in the bladders of some women. It remains unclear if these bacteria are viable and/or if their presence is relevant to idiopathic urinary tract conditions. Clinical urine specimens are usually considered to be sterile when they do not yield uropathogens using standard clinical cultivation procedures. Our aim was to test if the adult female bladder might contain bacteria that are not identified by these routine procedures. An additional aim was to identify and recommend the appropriate urine collection method for the study of bacterial communities in the female bladder. Consenting participants who were free of known urinary tract infection provided urine samples by voided, transurethral, and/or suprapubic collection methods. The presence of bacteria in these samples was assessed by bacterial culture, light microscopy, and 16S rRNA gene sequencing. Bacteria that are not or cannot be routinely cultivated (hereinafter called uncultivated bacteria) were common in voided urine, urine collected by transurethral catheter (TUC), and urine collected by suprapubic aspirate (SPA), regardless of whether the subjects had urinary symptoms. Voided urine samples contained mixtures of urinary and genital tract bacteria. Communities identified in parallel urine samples collected by TUC and SPA were similar. Uncultivated bacteria are clearly present in the bladders of some women. It remains unclear if these bacteria are viable and/or if their presence is relevant to idiopathic urinary tract conditions.Clinical urine specimens are usually considered to be sterile when they do not yield uropathogens using standard clinical cultivation procedures. Our aim was to test if the adult female bladder might contain bacteria that are not identified by these routine procedures. An additional aim was to identify and recommend the appropriate urine collection method for the study of bacterial communities in the female bladder. Consenting participants who were free of known urinary tract infection provided urine samples by voided, transurethral, and/or suprapubic collection methods. The presence of bacteria in these samples was assessed by bacterial culture, light microscopy, and 16S rRNA gene sequencing. Bacteria that are not or cannot be routinely cultivated (hereinafter called uncultivated bacteria) were common in voided urine, urine collected by transurethral catheter (TUC), and urine collected by suprapubic aspirate (SPA), regardless of whether the subjects had urinary symptoms. Voided urine samples contained mixtures of urinary and genital tract bacteria. Communities identified in parallel urine samples collected by TUC and SPA were similar. Uncultivated bacteria are clearly present in the bladders of some women. It remains unclear if these bacteria are viable and/or if their presence is relevant to idiopathic urinary tract conditions. |
| Author | Ruichen Rong MaryPat FitzGerald Alan J. Wolfe Paul Schreckenberger Elizabeth R. Mueller Linda Brubaker Qunfeng Dong David E. Nelson Evelyn Toh Kimberly Kenton Noriko Shibata |
| Author_xml | – sequence: 1 givenname: Alan J. surname: Wolfe fullname: Wolfe, Alan J. organization: Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA – sequence: 2 givenname: Evelyn surname: Toh fullname: Toh, Evelyn organization: Indiana University, Bloomington, Indiana, USA – sequence: 3 givenname: Noriko surname: Shibata fullname: Shibata, Noriko organization: Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA – sequence: 4 givenname: Ruichen surname: Rong fullname: Rong, Ruichen organization: University of North Texas, Denton, Texas, USA – sequence: 5 givenname: Kimberly surname: Kenton fullname: Kenton, Kimberly organization: Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA – sequence: 6 givenname: MaryPat surname: FitzGerald fullname: FitzGerald, MaryPat organization: Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA – sequence: 7 givenname: Elizabeth R. surname: Mueller fullname: Mueller, Elizabeth R. organization: Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA – sequence: 8 givenname: Paul surname: Schreckenberger fullname: Schreckenberger, Paul organization: Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA – sequence: 9 givenname: Qunfeng surname: Dong fullname: Dong, Qunfeng organization: University of North Texas, Denton, Texas, USA – sequence: 10 givenname: David E. surname: Nelson fullname: Nelson, David E. organization: Indiana University, Bloomington, Indiana, USA – sequence: 11 givenname: Linda surname: Brubaker fullname: Brubaker, Linda organization: Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA |
| BackLink | http://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=25698570$$DView record in Pascal Francis https://www.ncbi.nlm.nih.gov/pubmed/22278835$$D View this record in MEDLINE/PubMed |
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Mendeley... Clinical urine specimens are usually considered to be sterile when they do not yield uropathogens using standard clinical cultivation procedures. Our aim was... |
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| SubjectTerms | Bacteria - genetics Bacteriology Bacteriuria - microbiology Biological and medical sciences DNA, Bacterial - genetics DNA, Bacterial - isolation & purification Female Fundamental and applied biological sciences. Psychology Humans Metagenome - genetics Microbiology Miscellaneous Molecular Typing Principal Component Analysis RNA, Ribosomal, 16S - genetics RNA, Ribosomal, 16S - isolation & purification Sequence Analysis, DNA Skin - microbiology Urinary Bladder - microbiology Urine - microbiology |
| Title | Evidence of Uncultivated Bacteria in the Adult Female Bladder |
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