Sequence and structure analyses of lytic polysaccharide monooxygenases mined from metagenomic DNA of humus samples around white-rot fungi in Cuc Phuong tropical forest, Vietnam

• Published in: PeerJ (San Francisco, CA) Vol. 12; p. e17553
• Main Authors: Truong, Nam-Hai, Le, Thi-Thu-Hong, Nguyen, Hong-Duong, Nguyen, Hong-Thanh, Dao, Trong-Khoa, Tran, Thi-Minh-Nguyet, Tran, Huyen-Linh, Nguyen, Dinh-Trong, Nguyen, Thi-Quy, Phan, Thi-Hong-Thao, Do, Thi-Huyen, Phan, Ngoc-Han, Ngo, Thi-Cam-Nhung, Vu, Van-Van
• Format: Journal Article
• Language: English
• Published: United States PeerJ. Ltd 24.06.2024; PeerJ Inc
• Subjects: Amino Acid Sequence; Analysis; Bacteria; Biochemistry; Bioinformatics; Chitin; Chitin - metabolism; Chitin-active and cellulose-active LPMOs; Cholera toxin; DNA; Enzymes; Escherichia coli; Ethylenediaminetetraacetic acid; Forests; Fungal-bacterialrelationships; Fungi; Histidine; Markov processes; Metagenome; Metagenomics; Microbiology; Mixed Function Oxygenases - chemistry; Mixed Function Oxygenases - genetics; Mixed Function Oxygenases - metabolism; Molecular Biology; Mycology; Phenylalanine; Protein spatial conformation prediction; Vietnam; Vietnam; Metagenomics; Chitin-active and cellulose-active LPMOs; Fungal-bacterialrelationships; Protein spatial conformation prediction

White-rot fungi and bacteria communities are unique ecosystems with different types of symbiotic interactions occurring during wood decomposition, such as cooperation, mutualism, nutritional competition, and antagonism. The role of chitin-active lytic polysaccharide monooxygenases (LPMOs) in these s...