Comparative analysis of the integument transcriptomes of the black dilute mutant and the wild-type silkworm Bombyx mori
The insect cuticle is a critical protective shell that is composed predominantly of chitin and various cuticular proteins and pigments. Indeed, insects often change their surface pigment patterns in response to selective pressures, such as threats from predators, sexual selection and environmental c...
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Published in | Scientific reports Vol. 6; no. 1; p. 26114 |
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Main Authors | , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
London
Nature Publishing Group UK
19.05.2016
Nature Publishing Group |
Subjects | |
Online Access | Get full text |
ISSN | 2045-2322 2045-2322 |
DOI | 10.1038/srep26114 |
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Abstract | The insect cuticle is a critical protective shell that is composed predominantly of chitin and various cuticular proteins and pigments. Indeed, insects often change their surface pigment patterns in response to selective pressures, such as threats from predators, sexual selection and environmental changes. However, the molecular mechanisms underlying the construction of the epidermis and its pigmentation patterns are not fully understood. Among Lepidoptera, the silkworm is a favorable model for color pattern research. The
black dilute
(
bd
) mutant of silkworm is the result of a spontaneous mutation; the larval body color is notably melanized. We performed integument transcriptome sequencing of the wild-type strain Dazao and the mutant strains +/
bd
and
bd
/
bd
. In these experiments, during an early stage of the fourth molt, a stage at which approximately 51% of genes were expressed genome wide (RPKM ≥1) in each strain. A total of 254 novel transcripts were characterized using Cuffcompare and BLAST analyses. Comparison of the transcriptome data revealed 28 differentially expressed genes (DEGs) that may contribute to
bd
larval melanism, including 15 cuticular protein genes that were remarkably highly expressed in the
bd
/
bd
mutant. We suggest that these significantly up-regulated cuticular proteins may promote melanism in silkworm larvae. |
---|---|
AbstractList | The insect cuticle is a critical protective shell that is composed predominantly of chitin and various cuticular proteins and pigments. Indeed, insects often change their surface pigment patterns in response to selective pressures, such as threats from predators, sexual selection and environmental changes. However, the molecular mechanisms underlying the construction of the epidermis and its pigmentation patterns are not fully understood. Among Lepidoptera, the silkworm is a favorable model for color pattern research. The
black dilute
(
bd
) mutant of silkworm is the result of a spontaneous mutation; the larval body color is notably melanized. We performed integument transcriptome sequencing of the wild-type strain Dazao and the mutant strains +/
bd
and
bd
/
bd
. In these experiments, during an early stage of the fourth molt, a stage at which approximately 51% of genes were expressed genome wide (RPKM ≥1) in each strain. A total of 254 novel transcripts were characterized using Cuffcompare and BLAST analyses. Comparison of the transcriptome data revealed 28 differentially expressed genes (DEGs) that may contribute to
bd
larval melanism, including 15 cuticular protein genes that were remarkably highly expressed in the
bd
/
bd
mutant. We suggest that these significantly up-regulated cuticular proteins may promote melanism in silkworm larvae. The insect cuticle is a critical protective shell that is composed predominantly of chitin and various cuticular proteins and pigments. Indeed, insects often change their surface pigment patterns in response to selective pressures, such as threats from predators, sexual selection and environmental changes. However, the molecular mechanisms underlying the construction of the epidermis and its pigmentation patterns are not fully understood. Among Lepidoptera, the silkworm is a favorable model for color pattern research. The black dilute (bd) mutant of silkworm is the result of a spontaneous mutation; the larval body color is notably melanized. We performed integument transcriptome sequencing of the wild-type strain Dazao and the mutant strains +/bd and bd/bd. In these experiments, during an early stage of the fourth molt, a stage at which approximately 51% of genes were expressed genome wide (RPKM ≥1) in each strain. A total of 254 novel transcripts were characterized using Cuffcompare and BLAST analyses. Comparison of the transcriptome data revealed 28 differentially expressed genes (DEGs) that may contribute to bd larval melanism, including 15 cuticular protein genes that were remarkably highly expressed in the bd/bd mutant. We suggest that these significantly up-regulated cuticular proteins may promote melanism in silkworm larvae. |
ArticleNumber | 26114 |
Author | Wu, Songyuan Dai, Fangyin Lu, Cheng Xiong, Gao hu, Hai Peng, Chenxing Li, Chunlin Tong, Xiaoling Lu, Kunpeng Tan, Duan Han, Minjin |
Author_xml | – sequence: 1 givenname: Songyuan surname: Wu fullname: Wu, Songyuan organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 2 givenname: Xiaoling surname: Tong fullname: Tong, Xiaoling organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 3 givenname: Chenxing surname: Peng fullname: Peng, Chenxing organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 4 givenname: Gao surname: Xiong fullname: Xiong, Gao organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 5 givenname: Kunpeng surname: Lu fullname: Lu, Kunpeng organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 6 givenname: Hai surname: hu fullname: hu, Hai organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 7 givenname: Duan surname: Tan fullname: Tan, Duan organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 8 givenname: Chunlin surname: Li fullname: Li, Chunlin organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 9 givenname: Minjin surname: Han fullname: Han, Minjin organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 10 givenname: Cheng surname: Lu fullname: Lu, Cheng organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University – sequence: 11 givenname: Fangyin surname: Dai fullname: Dai, Fangyin organization: State Key Laboratory of Silkworm Genome Biology, Key Laboratory for Sericulture Functional Genomics and Biotechnology of Agricultural Ministry, Southwest University |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/27193628$$D View this record in MEDLINE/PubMed |
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SubjectTerms | 38 38/91 631/181/2476/2477 631/208/514/1949 Animals Bombyx - genetics Bombyx mori Butterflies & moths Chitin Color Comparative analysis Dopamine Environmental changes Epidermis Gene expression Gene Expression Profiling Genomes Genomics Humanities and Social Sciences Insects Integument Integumentary System - physiology Laboratories Larva - genetics Larvae Lepidoptera Melanism Molecular modelling Molting multidisciplinary Mutants Mutation Pigmentation Pigments Pigments, Biological - biosynthesis Predators Science Sequence Analysis, DNA Sexual selection |
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Title | Comparative analysis of the integument transcriptomes of the black dilute mutant and the wild-type silkworm Bombyx mori |
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