Genetic assessment using whole-exome sequencing for a young hypertriglyceridemic patient with repeated acute pancreatitis
Hypertriglyceridemia is caused not only by environmental factors but also by genetic factors. Severe hypertriglyceridemia is prone to complications of acute pancreatitis. Here, we report a whole-exome sequencing (WES) analysis for a young hypertriglyceridemic patient with recurrent acute pancreatiti...
Saved in:
Published in | Endocrine Journal Vol. 69; no. 9; pp. 1101 - 1108 |
---|---|
Main Authors | , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Kyoto
The Japan Endocrine Society
01.01.2022
Japan Science and Technology Agency |
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | Hypertriglyceridemia is caused not only by environmental factors but also by genetic factors. Severe hypertriglyceridemia is prone to complications of acute pancreatitis. Here, we report a whole-exome sequencing (WES) analysis for a young hypertriglyceridemic patient with recurrent acute pancreatitis and the patient’s mother. A 28-year-old hypertriglyceridemic female was admitted to our hospital. At 23 years old, a health checkup clarified her hypertriglyceridemia. At the age of 26 and 27, she had repeated acute pancreatitis with severe hypertriglyceridemia (serum triglyceride level were 3,888 mg/dL and 12,080 mg/dL, respectively). The patient’s BMI was 29.0 kg/m2, and blood samples under fibrate medication showed triglyceride 451 mg/dL and HbA1c 7.2%. Type V dyslipidemia became more apparent at postprandial state. The WES analysis showed that the patients had two heterozygous variants in Apolipoprotein A5 (APOA5) gene (p.G185C and p.V153M), a heterozygous variant in Apolipoprotein E (APOE) gene (p.R176C), three heterozygous variants in Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) gene (p.T1220I, p.R1453W and p.V470M). On the other hand, her mother, who had moderate hypertriglyceridemia without acute pancreatitis, had a heterozygous variant in APOA5 gene (p.G185C) and two heterozygous variants in CFTR gene (p.T1220I and p.V470M). These results suggest that the more severe pathology of the patient than her mother might be due to the possible compound heterozygous APOA5 variants, the heterozygous APOE variant, and the possible compound heterozygous CFTR variants. In this case, WES analyses were useful to evaluate not only the causative genes of hypertriglyceridemia (APOA5 and APOE) but also the genes involved in the development of acute pancreatitis (CFTR) simultaneously. |
---|---|
AbstractList | Hypertriglyceridemia is caused not only by environmental factors but also by genetic factors. Severe hypertriglyceridemia is prone to complications of acute pancreatitis. Here, we report a whole-exome sequencing (WES) analysis for a young hypertriglyceridemic patient with recurrent acute pancreatitis and the patient’s mother. A 28-year-old hypertriglyceridemic female was admitted to our hospital. At 23 years old, a health checkup clarified her hypertriglyceridemia. At the age of 26 and 27, she had repeated acute pancreatitis with severe hypertriglyceridemia (serum triglyceride level were 3,888 mg/dL and 12,080 mg/dL, respectively). The patient’s BMI was 29.0 kg/m2, and blood samples under fibrate medication showed triglyceride 451 mg/dL and HbA1c 7.2%. Type V dyslipidemia became more apparent at postprandial state. The WES analysis showed that the patients had two heterozygous variants in Apolipoprotein A5 (APOA5) gene (p.G185C and p.V153M), a heterozygous variant in Apolipoprotein E (APOE) gene (p.R176C), three heterozygous variants in Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) gene (p.T1220I, p.R1453W and p.V470M). On the other hand, her mother, who had moderate hypertriglyceridemia without acute pancreatitis, had a heterozygous variant in APOA5 gene (p.G185C) and two heterozygous variants in CFTR gene (p.T1220I and p.V470M). These results suggest that the more severe pathology of the patient than her mother might be due to the possible compound heterozygous APOA5 variants, the heterozygous APOE variant, and the possible compound heterozygous CFTR variants. In this case, WES analyses were useful to evaluate not only the causative genes of hypertriglyceridemia (APOA5 and APOE) but also the genes involved in the development of acute pancreatitis (CFTR) simultaneously. |
ArticleNumber | EJ22-0024 |
Author | Fujita, Shingo Imada, Tasuku Murano, Takeyoshi Asano, Yoshihiro Bujo, Hideaki Kozawa, Junji Nishizawa, Hitoshi Yamaguchi, Takashi Miyashita, Yohei Maeda, Norikazu Shimomura, Iichiro |
Author_xml | – sequence: 1 fullname: Fujita, Shingo – sequence: 2 fullname: Nishizawa, Hitoshi – sequence: 3 fullname: Miyashita, Yohei – sequence: 4 fullname: Imada, Tasuku – sequence: 5 fullname: Yamaguchi, Takashi – sequence: 6 fullname: Murano, Takeyoshi – sequence: 7 fullname: Bujo, Hideaki – sequence: 8 fullname: Asano, Yoshihiro – sequence: 9 fullname: Kozawa, Junji – sequence: 10 fullname: Maeda, Norikazu – sequence: 11 fullname: Shimomura, Iichiro |
BookMark | eNpdkU9P4zAQxa0VSFtgP8DeInHZS4r_NvZxhaCAkLhwt1xn0rpK7GA7YvPt11FRD1xsa_x7TzPzrtCFDx4Q-k3wmgjc3IFvg43H9cMLpTXGlP9AK8K4rLng-AKtsCKylkqon-gqpSPGjAnOVmjegofsbGVSgpQG8LmakvP76vMQeqjhXxigSvAxgbdLuQuxMtUcpvI-zCPEHN2-ny1E18JQjEaT3eLy6fKhijCCydBWxk4Zyp-3sRRcdukGXXamT_Dr675G748P7_dP9evb9vn-72ttBWa5Zo21YI3aUcJ2RhpuOiKlVArzBivT8g5os7ObxlguWSt2CgRWXFDeguoou0Z_TrZjDGWIlPXgkoW-Nx7ClDTdcIk3gnNV0Ntv6DFM0ZfmNG0oJphxJgpFTpSNIaUInR6jG0ycNcF6yUJ_ZaGXLPSSRdFsT5pjymYPZ4WJZfU9nBUbpdVynJVnwh5MLBj7D7_fnVM |
CitedBy_id | crossref_primary_10_1097_MOL_0000000000000910 |
Cites_doi | 10.1016/j.atherosclerosis.2006.12.010 10.1038/gim.2015.30 10.1074/jbc.M109.079459 10.1136/gutjnl-2011-300645 10.1097/01.mcg.0000436438.60145.5a 10.1053/gast.2001.29673 10.1038/ncpendmet0982 10.1038/ng.2892 10.1016/j.atherosclerosissup.2016.10.002 10.1016/0009-8981(93)90144-S 10.1007/s10620-014-3476-9 10.1159/000157880 10.1038/nrendo.2015.26 10.1016/j.jpeds.2017.08.063 10.1161/ATVBAHA.108.176917 10.1016/j.atherosclerosis.2011.12.028 10.1194/jlr.P800011-JLR200 10.1016/j.atherosclerosis.2005.02.025 10.1186/1472-6823-12-2 10.1016/j.atherosclerosis.2013.12.009 10.1093/hmg/ddg243 10.1620/tjem.232.69 10.1126/science.3283935 10.1111/1751-2980.12490 10.1053/gast.2001.27992 10.1038/s41424-018-0069-5 10.1016/j.ejim.2014.08.008 |
ContentType | Journal Article |
Copyright | The Japan Endocrine Society Copyright Japan Science and Technology Agency 2022 |
Copyright_xml | – notice: The Japan Endocrine Society – notice: Copyright Japan Science and Technology Agency 2022 |
DBID | AAYXX CITATION 7QP 7T5 7TK 8FD FR3 H94 P64 RC3 7X8 |
DOI | 10.1507/endocrj.EJ22-0024 |
DatabaseName | CrossRef Calcium & Calcified Tissue Abstracts Immunology Abstracts Neurosciences Abstracts Technology Research Database Engineering Research Database AIDS and Cancer Research Abstracts Biotechnology and BioEngineering Abstracts Genetics Abstracts MEDLINE - Academic |
DatabaseTitle | CrossRef Genetics Abstracts Technology Research Database AIDS and Cancer Research Abstracts Immunology Abstracts Engineering Research Database Calcium & Calcified Tissue Abstracts Neurosciences Abstracts Biotechnology and BioEngineering Abstracts MEDLINE - Academic |
DatabaseTitleList | Genetics Abstracts |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Medicine |
EISSN | 1348-4540 |
EndPage | 1108 |
ExternalDocumentID | 10_1507_endocrj_EJ22_0024 article_endocrj_69_9_69_EJ22_0024_article_char_en |
GroupedDBID | --- .55 .GJ 29G 2WC 3O- 53G 5GY 5RE AAEJM AAUGY ACPRK ACRZS ADBBV AENEX AJJEV ALMA_UNASSIGNED_HOLDINGS BAWUL BKOMP CS3 DIK DU5 E3Z EBD EBS EJD EMOBN F5P JMI JSF JSH KQ8 MOJWN M~E OK1 P2P RJT RNS RZJ SV3 TKC TR2 X7M XSB ZGI ZXP AAYXX AFPKN CITATION GROUPED_DOAJ 7QP 7T5 7TK 8FD FR3 H94 P64 RC3 7X8 |
ID | FETCH-LOGICAL-c503t-37cceca9b213ba8a4af18889904709ad4fe27bc67ac483d5b9e5094524de9f23 |
ISSN | 0918-8959 |
IngestDate | Wed Dec 04 15:33:01 EST 2024 Tue Nov 19 06:09:26 EST 2024 Thu Nov 21 22:55:15 EST 2024 Thu Aug 17 20:33:24 EDT 2023 |
IsDoiOpenAccess | true |
IsOpenAccess | true |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 9 |
Language | English |
LinkModel | OpenURL |
MergedId | FETCHMERGED-LOGICAL-c503t-37cceca9b213ba8a4af18889904709ad4fe27bc67ac483d5b9e5094524de9f23 |
Notes | ObjectType-Case Study-2 SourceType-Scholarly Journals-1 ObjectType-Feature-4 content type line 23 ObjectType-Report-1 ObjectType-Article-3 |
OpenAccessLink | https://www.jstage.jst.go.jp/article/endocrj/69/9/69_EJ22-0024/_article/-char/en |
PQID | 2720103435 |
PQPubID | 2048504 |
PageCount | 8 |
ParticipantIDs | proquest_miscellaneous_2648065449 proquest_journals_2720103435 crossref_primary_10_1507_endocrj_EJ22_0024 jstage_primary_article_endocrj_69_9_69_EJ22_0024_article_char_en |
PublicationCentury | 2000 |
PublicationDate | 2022-01-01 |
PublicationDateYYYYMMDD | 2022-01-01 |
PublicationDate_xml | – month: 01 year: 2022 text: 2022-01-01 day: 01 |
PublicationDecade | 2020 |
PublicationPlace | Kyoto |
PublicationPlace_xml | – name: Kyoto |
PublicationTitle | Endocrine Journal |
PublicationYear | 2022 |
Publisher | The Japan Endocrine Society Japan Science and Technology Agency |
Publisher_xml | – name: The Japan Endocrine Society – name: Japan Science and Technology Agency |
References | 25 Lee JH, Choi JH, Namkung W, Hanrahan JW, Chang J, et al. (2003) A haplotype-based molecular analysis of CFTR mutations associated with respiratory and pancreatic diseases. Hum Mol Genet 12: 2321–2332. 7 Stroes E, Moulin P, Parhofer KG, Rebours V, Löhr JM, et al. (2017) Diagnostic algorithm for familial chylomicronemia syndrome. Atheroscler Suppl 23: 1–7. 2 Talmud PJ, Smart M, Presswood E, Cooper JA, Nicaud V, et al. (2008) ANGPTL4 E40K and T266M: effects on plasma triglyceride and hdl levels, postprandial responses, and CHD risk. Arterioscler Thromb Vasc Biol 28: 2319–2325. 13 Richards S, Aziz N, Bale S, Bick D, Das S, et al. (2015) Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med 17: 405–424. 21 Okazaki H, Goldstein JL, Brown MS, Liang G (2010) Lxr-srebp-1c-phospholipid transfer protein axis controls very low density lipoprotein (Vldl) particle size. J Biol Chem 285: 6801–6810. 12 Kircher M, Witten DM, Jain P, O’Roak BJ, Cooper GM, et al. (2014) A general framework for estimating the relative pathogenicity of human genetic variants. Nat Genet 46: 310–315. 24 Noone PG, Zhou Z, Silverman LM, Jowell PS, Knowles MR, et al. (2001) Cystic fibrosis gene mutations and pancreatitis risk: relation to epithelial ion transport and trypsin inhibitor gene mutations. Gastroenterology 121: 1310–1319. 9 Murano T, Sako T, Oikawa S, Shirai K (2005) The recovery of dysfunctional lipoprotein lipase (Asp204-glu) activity by modification of substrate. Atherosclerosis 183: 101–107. 20 Albers K, Schlein C, Wenner K, Lohse P, Bartelt A, et al. (2014) Homozygosity for a partial deletion of apoprotein A-V signal peptide results in intracellular missorting of the protein and chylomicronemia in a breast-fed infant. Atherosclerosis 233: 97–103. 10 Zou WB, Tang XY, Zhou DZ, Qian YY, Hu LH, et al. (2018) Spink1, prss1, ctrc, and cftr genotypes influence disease onset and clinical outcomes in chronic pancreatitis. Clin Transl Gastroenterol 9: 204. 17 Xiao Y, Yuan W, Yu B, Guo Y, Xu X, et al. (2017) Targeted gene next-generation sequencing in chinese children with chronic pancreatitis and acute recurrent pancreatitis. J Pediatr 191: 158–163.e3. 27 Valdivielso P, Ramírez-Bueno A, Ewald N (2014) Current knowledge of hypertriglyceridemic pancreatitis. Eur J Intern Med 25: 689–694. 28 Freedman SD, Kern HF, Scheele GA (2001) Pancreatic acinar cell dysfunction in CFTR(–/–) mice is associated with impairments in luminal pH and endocytosis. Gastroenterology 121: 950–957. 15 Chen WJ, Sun XF, Zhang RX, Xu MJ, Dou TH, et al. (2017) Hypertriglyceridemic acute pancreatitis in emergency department: typical clinical features and genetic variants: HTGAP in emergency department. J Dig Dis 18: 359–368. 6 Brahm AJ, Hegele RA (2015) Chylomicronaemia—current diagnosis and future therapies. Nat Rev Endocrinol 11: 352–362. 5 Scherer J, Singh VP, Pitchumoni CS, Yadav D (2014) Issues in hypertriglyceridemic pancreatitis: an update. J Clin Gastroenterol 48: 195–203. 14 Pullinger CR, Aouizerat BE, Movsesyan I, Durlach V, Sijbrands EJ, et al. (2008) An apolipoprotein A-V gene SNP is associated with marked hypertriglyceridemia among Asian-American patients. J Lipid Res 49: 1846–1854. 19 Talmud PJ (2007) Rare APOA5 mutations—clinical consequences, metabolic and functional effects: an ENID review. Atherosclerosis 194: 287–292. 8 Kobayashi J, Hashimoto H, Fukamachi I, Tashiro J, Shirai K, et al. (1993) Lipoprotein lipase mass and activity in severe hypertriglyceridemia. Clin Chim Acta 216: 113–123. 26 Havel RJ (1969) Pathogenesis, differentiation and management of hypertriglyceridemia. Adv Intern Med 15: 117–154. 4 Murad MH, Hazem A, Coto-Yglesias F, Dzyubak S, Gupta S, et al. (2012) The association of hypertriglyceridemia with cardiovascular events and pancreatitis: a systematic review and meta-analysis. BMC Endocr Disord 12: 2. 18 Nakano E, Masamune A, Niihori T, Kume K, Hamada S, et al. (2015) Targeted next-generation sequencing effectively analyzed the cystic fibrosis transmembrane conductance regulator gene in pancreatitis. Dig Dis Sci 60: 1297–1307. 22 Ranganathan G, Unal R, Pokrovskaya ID, Tripathi P, Rotter JI, et al. (2012) The lipoprotein lipase (Lpl) S447X gain of function variant involves increased mRNA translation. Atherosclerosis 221: 143–147. 16 Mahley RW (1988) Apolipoprotein E: cholesterol transport protein with expanding role in cell biology. Science 240: 622–630. 23 Rosendahl J, Landt O, Bernadova J, Kovacs P, Teich N, et al. (2013) CFTR, SPINK1, CTRC and PRSS1 variants in chronic pancreatitis: is the role of mutated CFTR overestimated? Gut 62: 582–592. 3 Antonios N, Angiolillo DJ, Silliman S (2008) Hypertriglyceridemia and ischemic stroke. Eur Neurol 60: 269–278. 1 de Graaf J, Couture P, Sniderman A (2008) A diagnostic algorithm for the atherogenic apolipoprotein B dyslipoproteinemias. Nat Clin Pract Endocrinol Metab 4: 608–618. 11 Masamune A (2014) Genetics of pancreatitis: the 2014 update. Tohoku J Exp Med 232: 69–77. 22 23 24 25 26 27 28 10 11 12 13 14 15 16 17 18 19 1 2 3 4 5 6 7 8 9 20 21 |
References_xml | – ident: 19 doi: 10.1016/j.atherosclerosis.2006.12.010 – ident: 13 doi: 10.1038/gim.2015.30 – ident: 21 doi: 10.1074/jbc.M109.079459 – ident: 23 doi: 10.1136/gutjnl-2011-300645 – ident: 5 doi: 10.1097/01.mcg.0000436438.60145.5a – ident: 24 doi: 10.1053/gast.2001.29673 – ident: 1 doi: 10.1038/ncpendmet0982 – ident: 12 doi: 10.1038/ng.2892 – ident: 26 – ident: 7 doi: 10.1016/j.atherosclerosissup.2016.10.002 – ident: 8 doi: 10.1016/0009-8981(93)90144-S – ident: 18 doi: 10.1007/s10620-014-3476-9 – ident: 3 doi: 10.1159/000157880 – ident: 6 doi: 10.1038/nrendo.2015.26 – ident: 17 doi: 10.1016/j.jpeds.2017.08.063 – ident: 2 doi: 10.1161/ATVBAHA.108.176917 – ident: 22 doi: 10.1016/j.atherosclerosis.2011.12.028 – ident: 14 doi: 10.1194/jlr.P800011-JLR200 – ident: 9 doi: 10.1016/j.atherosclerosis.2005.02.025 – ident: 4 doi: 10.1186/1472-6823-12-2 – ident: 20 doi: 10.1016/j.atherosclerosis.2013.12.009 – ident: 25 doi: 10.1093/hmg/ddg243 – ident: 11 doi: 10.1620/tjem.232.69 – ident: 16 doi: 10.1126/science.3283935 – ident: 15 doi: 10.1111/1751-2980.12490 – ident: 28 doi: 10.1053/gast.2001.27992 – ident: 10 doi: 10.1038/s41424-018-0069-5 – ident: 27 doi: 10.1016/j.ejim.2014.08.008 |
SSID | ssj0033543 |
Score | 2.350954 |
Snippet | Hypertriglyceridemia is caused not only by environmental factors but also by genetic factors. Severe hypertriglyceridemia is prone to complications of acute... |
SourceID | proquest crossref jstage |
SourceType | Aggregation Database Publisher |
StartPage | 1101 |
SubjectTerms | Acute pancreatitis Apolipoprotein A5 Apolipoprotein E Apolipoproteins Cystic fibrosis Cystic fibrosis transmembrane conductance regulator Dyslipidemia Environmental factors Genes Genetic factors Hypertriglyceridemia Pancreatitis Patients |
Title | Genetic assessment using whole-exome sequencing for a young hypertriglyceridemic patient with repeated acute pancreatitis |
URI | https://www.jstage.jst.go.jp/article/endocrj/69/9/69_EJ22-0024/_article/-char/en https://www.proquest.com/docview/2720103435 https://search.proquest.com/docview/2648065449 |
Volume | 69 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
ispartofPNX | Endocrine Journal, 2022, Vol.69(9), pp.1101-1108 |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwpV3db9MwELfKQIgXxKcoDGQknqgymsTOxxsIDZWhISGKNJ4ix3HWFpZMbaLR_Zf8R9zZjpttfWDwErWJU13z--V8d747E_IqUjAJxaHwEgYvOQMPwsvBLvdEyWPFczCgFRYKH36OJt_YwRE_Ggx-97KW2ibfk-db60r-BVU4B7hilew1kHU_CifgM-ALR0AYjn-FMfaM1g1XXXvNUat9_zPc9dZTv-oTNbLJ0i5jcrTGF3w0Awd02YBv_nMtQVaTJG-7rJro7FKdgqIGg1RITCYAtWEszGa-uhDPr4paYg1ht7TtKNEu5sY2_Yphrrq3BDKbn4szfWkCGgW-Otzna9zdydz2vZ4pd-XjiSj02alYtT_afrQiCC5FK3S9G1gB1WgjnE1P7Ycm_cRLUtspXBnFHGLgk5vWTp3mNpu8WIamPTUMNo3fm9Kx1GHrdMF1hojSoiz29g9Q3rGp6b7UhdtinNmxWZRmKR7wngzvyboRWC0Hw26Qm9ibERXtpy9uYSsMuUnk7P6iXWgHQd5cEeOCqXRrAd7C8VWTQdtB03vkrsWYvjNy3CcDVT0gtw9tisZDsrakpBtSUk1K2iMl3ZCSAimpoJqUdBspqSUlRVLSjpRUk5L2SfmITD_sT99PPLu_hyf5OGxgbpNSSZHmgR_mIhFMlH6SJGAfsXicioKVKohzGcVCsiQseJ4qbPfIA1aotAzCx2Snqiv1hFARiWRc8FJwETBRyDSQsgBHPoH5Ky5LNiSvuyeZnZouLhl6v_DYHaIOySF5a561G3pt8Idkt0Mps_pilWHGgz8OwT8ZkpfuMmhzXKITlapbGBMxzHRgLH36_1I8I3c2r-Au2WmWrXoOJnSTv9Ck_AODU9ar |
link.rule.ids | 315,781,785,27929,27930 |
linkProvider | Colorado Alliance of Research Libraries |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Genetic+assessment+using+whole-exome+sequencing+for+a+young+hypertriglyceridemic+patient+with+repeated+acute+pancreatitis&rft.jtitle=Endocrine+Journal&rft.au=Fujita%2C+Shingo&rft.au=Nishizawa%2C+Hitoshi&rft.au=Miyashita%2C+Yohei&rft.au=Imada%2C+Tasuku&rft.date=2022-01-01&rft.pub=The+Japan+Endocrine+Society&rft.issn=0918-8959&rft.eissn=1348-4540&rft.volume=69&rft.issue=9&rft.spage=1101&rft.epage=1108&rft_id=info:doi/10.1507%2Fendocrj.EJ22-0024&rft.externalDocID=article_endocrj_69_9_69_EJ22_0024_article_char_en |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0918-8959&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0918-8959&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0918-8959&client=summon |