A Functional Variant in MicroRNA-196a2 Is Associated with Susceptibility of Colorectal Cancer in a Chinese Population
MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of hundreds of genes, broadly affecting miRNA function. Notably, the rs11614913 SNP in miR-196a2 has been implicated in carcinogenesis, but its a...
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Published in | Archives of medical research Vol. 42; no. 2; pp. 144 - 148 |
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Abstract | MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of hundreds of genes, broadly affecting miRNA function. Notably, the rs11614913 SNP in miR-196a2 has been implicated in carcinogenesis, but its association with colorectal cancer (CRC) remains unexplored. We performed a case−control study to investigate the genetic association between this functional SNP and CRC susceptibility and progression.
We genotyped the rs11614913 SNP in 252 CRC patients and 543 healthy controls by polymerase chain reaction–restriction fragment length polymorphism (PCR–RFLP). In addition, we examined miR-196a expression level in colorectal cancer tissues (
n = 50) obtained from the studied CRC patients.
Frequency of the CC genotype was higher in CRC patients than controls, implying that the subjects with the CC genotype or C allele containing genotypes (CT and CC) have a higher risk of CRC. However, no significant association between this polymorphism and CRC progression was observed. Expression analysis revealed that rs11614913 CC or carrying at least one C allele was associated with a significantly increased level of mature miR-196a (
p = 0.010 or = 0.022).
The present study provides the first evidence that miR-196a2 polymorphism may contribute to CRC susceptibility in a Chinese population through modulating mature miR-196a expression. |
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AbstractList | MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of hundreds of genes, broadly affecting miRNA function. Notably, the rs11614913 SNP in miR-196a2 has been implicated in carcinogenesis, but its association with colorectal cancer (CRC) remains unexplored. We performed a case−control study to investigate the genetic association between this functional SNP and CRC susceptibility and progression.
We genotyped the rs11614913 SNP in 252 CRC patients and 543 healthy controls by polymerase chain reaction–restriction fragment length polymorphism (PCR–RFLP). In addition, we examined miR-196a expression level in colorectal cancer tissues (
n = 50) obtained from the studied CRC patients.
Frequency of the CC genotype was higher in CRC patients than controls, implying that the subjects with the CC genotype or C allele containing genotypes (CT and CC) have a higher risk of CRC. However, no significant association between this polymorphism and CRC progression was observed. Expression analysis revealed that rs11614913 CC or carrying at least one C allele was associated with a significantly increased level of mature miR-196a (
p = 0.010 or = 0.022).
The present study provides the first evidence that miR-196a2 polymorphism may contribute to CRC susceptibility in a Chinese population through modulating mature miR-196a expression. Background and Aims: MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of hundreds of genes, broadly affecting miRNA function. Notably, the rs11614913 SNP in miR-196a2 has been implicated in carcinogenesis, but its association with colorectal cancer (CRC) remains unexplored. We performed a case-control study to investigate the genetic association between this functional SNP and CRC susceptibility and progression. Methods: We genotyped the rs11614913 SNP in 252 CRC patients and 543 healthy controls by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). In addition, we examined miR-196a expression level in colorectal cancer tissues (n = 50) obtained from the studied CRC patients. Results: Frequency of the CC genotype was higher in CRC patients than controls, implying that the subjects with the CC genotype or C allele containing genotypes (CT and CC) have a higher risk of CRC. However, no significant association between this polymorphism and CRC progression was observed. Expression analysis revealed that rs11614913 CC or carrying at least one C allele was associated with a significantly increased level of mature miR-196a (p = 0.010 or = 0.022). Conclusions: The present study provides the first evidence that miR-196a2 polymorphism may contribute to CRC susceptibility in a Chinese population through modulating mature miR-196a expression. MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of hundreds of genes, broadly affecting miRNA function. Notably, the rs11614913 SNP in miR-196a2 has been implicated in carcinogenesis, but its association with colorectal cancer (CRC) remains unexplored. We performed a case-control study to investigate the genetic association between this functional SNP and CRC susceptibility and progression. We genotyped the rs11614913 SNP in 252 CRC patients and 543 healthy controls by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). In addition, we examined miR-196a expression level in colorectal cancer tissues (n = 50) obtained from the studied CRC patients. Frequency of the CC genotype was higher in CRC patients than controls, implying that the subjects with the CC genotype or C allele containing genotypes (CT and CC) have a higher risk of CRC. However, no significant association between this polymorphism and CRC progression was observed. Expression analysis revealed that rs11614913 CC or carrying at least one C allele was associated with a significantly increased level of mature miR-196a (p = 0.010 or = 0.022). The present study provides the first evidence that miR-196a2 polymorphism may contribute to CRC susceptibility in a Chinese population through modulating mature miR-196a expression. MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of hundreds of genes, broadly affecting miRNA function. Notably, the rs11614913 SNP in miR-196a2 has been implicated in carcinogenesis, but its association with colorectal cancer (CRC) remains unexplored. We performed a case-control study to investigate the genetic association between this functional SNP and CRC susceptibility and progression.BACKGROUND AND AIMSMicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of hundreds of genes, broadly affecting miRNA function. Notably, the rs11614913 SNP in miR-196a2 has been implicated in carcinogenesis, but its association with colorectal cancer (CRC) remains unexplored. We performed a case-control study to investigate the genetic association between this functional SNP and CRC susceptibility and progression.We genotyped the rs11614913 SNP in 252 CRC patients and 543 healthy controls by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). In addition, we examined miR-196a expression level in colorectal cancer tissues (n = 50) obtained from the studied CRC patients.METHODSWe genotyped the rs11614913 SNP in 252 CRC patients and 543 healthy controls by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). In addition, we examined miR-196a expression level in colorectal cancer tissues (n = 50) obtained from the studied CRC patients.Frequency of the CC genotype was higher in CRC patients than controls, implying that the subjects with the CC genotype or C allele containing genotypes (CT and CC) have a higher risk of CRC. However, no significant association between this polymorphism and CRC progression was observed. Expression analysis revealed that rs11614913 CC or carrying at least one C allele was associated with a significantly increased level of mature miR-196a (p = 0.010 or = 0.022).RESULTSFrequency of the CC genotype was higher in CRC patients than controls, implying that the subjects with the CC genotype or C allele containing genotypes (CT and CC) have a higher risk of CRC. However, no significant association between this polymorphism and CRC progression was observed. Expression analysis revealed that rs11614913 CC or carrying at least one C allele was associated with a significantly increased level of mature miR-196a (p = 0.010 or = 0.022).The present study provides the first evidence that miR-196a2 polymorphism may contribute to CRC susceptibility in a Chinese population through modulating mature miR-196a expression.CONCLUSIONSThe present study provides the first evidence that miR-196a2 polymorphism may contribute to CRC susceptibility in a Chinese population through modulating mature miR-196a expression. Background and Aims MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of hundreds of genes, broadly affecting miRNA function. Notably, the rs11614913 SNP in miR-196a2 has been implicated in carcinogenesis, but its association with colorectal cancer (CRC) remains unexplored. We performed a case−control study to investigate the genetic association between this functional SNP and CRC susceptibility and progression. Methods We genotyped the rs11614913 SNP in 252 CRC patients and 543 healthy controls by polymerase chain reaction–restriction fragment length polymorphism (PCR–RFLP). In addition, we examined miR-196a expression level in colorectal cancer tissues ( n = 50) obtained from the studied CRC patients. Results Frequency of the CC genotype was higher in CRC patients than controls, implying that the subjects with the CC genotype or C allele containing genotypes (CT and CC) have a higher risk of CRC. However, no significant association between this polymorphism and CRC progression was observed. Expression analysis revealed that rs11614913 CC or carrying at least one C allele was associated with a significantly increased level of mature miR-196a ( p = 0.010 or = 0.022). Conclusions The present study provides the first evidence that miR-196a2 polymorphism may contribute to CRC susceptibility in a Chinese population through modulating mature miR-196a expression. |
Author | Liu, Ying Chen, Long-hua Xie, Guo-zhu Yuan, Ya-wei Zhan, Jun-fang Chen, Zhi-xian Sun, Ai-min |
Author_xml | – sequence: 1 givenname: Jun-fang surname: Zhan fullname: Zhan, Jun-fang email: zhanjunfang@sina.cn organization: Department of Health Management Centre, Guangzhou First Municipal People’s Hospital Affiliated to Guangzhou Medical College, Guangzhou, Guangdong Province, China – sequence: 2 givenname: Long-hua surname: Chen fullname: Chen, Long-hua organization: Department of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China – sequence: 3 givenname: Zhi-xian surname: Chen fullname: Chen, Zhi-xian organization: Department of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China – sequence: 4 givenname: Ya-wei surname: Yuan fullname: Yuan, Ya-wei organization: Department of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China – sequence: 5 givenname: Guo-zhu surname: Xie fullname: Xie, Guo-zhu organization: Department of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China – sequence: 6 givenname: Ai-min surname: Sun fullname: Sun, Ai-min organization: Department of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China – sequence: 7 givenname: Ying surname: Liu fullname: Liu, Ying organization: Department of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China |
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Keywords | MicroRNA-196a2 Genetic susceptibility Case–control study Colorectal cancer Polymorphism |
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Snippet | MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate the expression of... Background and Aims MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially modulate... Background and Aims: MicroRNAs (miRNA) can act as oncogenes or tumor suppressors. Polymorphisms present in pri-, pre- and mature miRNAs can potentially... |
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SubjectTerms | Asian Continental Ancestry Group Carcinogenesis Case-Control Studies Case–control study Colorectal cancer Colorectal Neoplasms - epidemiology Colorectal Neoplasms - genetics Female Genetic Association Studies Genetic Predisposition to Disease Genetic susceptibility Humans Internal Medicine Male MicroRNA-196a2 MicroRNAs - genetics Middle Aged Neoplasm Staging Polymorphism Polymorphism, Single Nucleotide Risk Factors Sequence Analysis, DNA |
Title | A Functional Variant in MicroRNA-196a2 Is Associated with Susceptibility of Colorectal Cancer in a Chinese Population |
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