Evaluation and Updating of the Osiris Expert System for Identification of Escherichia coli β-Lactam Resistance Phenotypes

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Published inJournal of Clinical Microbiology Vol. 43; no. 4; pp. 1846 - 1850
Main Authors BERT, Frédéric, JUVIN, Manette, OULD-HOCINE, Zahia, CLAREBOUT, Gervais, KELLER, Emmanuelle, LAMBERT, Nicole, ARLET, Guillaume
Format Journal Article
LanguageEnglish
Published Washington, DC American Society for Microbiology 01.04.2005
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AbstractList ABSTRACT Osiris is a video zone size reader for disk diffusion tests that includes a built-in extended expert system (EES). We evaluated the efficacy of the Osiris EES for the identification of β-lactam susceptibility phenotypes of Escherichia coli isolates. Fifteen β-lactam agents and three β-lactam-β-lactamase inhibitor combinations were tested by the disk diffusion method against 50 E. coli strains with well-characterized resistance mechanisms. The strains were screened for the production of extended-spectrum β-lactamase (ESBL) by the double-disk synergy test using a disk of amoxicillin-clavulanic acid with disks of the extended-spectrum cephalosporins and aztreonam. Overall, the EES accurately identified the phenotype for 78% of the strains, indicated an inexact phenotype for 17% of the strains, and could not find a matching phenotype for the remaining 5% of the strains. The percentage of correct identification for each resistance mechanism was 100% for inhibitor-resistant TEM and for TEM plus cephalosporinase, 88.9% for TEM and for ESBL, 70.8% for cephalosporinase overproduction, and 25% for oxacillinase. The main cause of discrepancy was the misidentification of oxacillinase as inhibitor-resistant TEM. The conventional double-disk synergy test failed to detect ESBL production in two strains (one producing VEB-1 and one producing CTX-M-14), but synergy between cefepime and amoxicillin-clavulanic acid was visible after the distance between the disks was reduced to 20 mm. After the interpretative guidelines of the EES were updated according to our results, the percentage of correct phenotype identification increased from 78 to 96%.
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Osiris is a video zone size reader for disk diffusion tests that includes a built-in extended expert system (EES). We evaluated the efficacy of the Osiris EES for the identification of beta-lactam susceptibility phenotypes of Escherichia coli isolates. Fifteen beta-lactam agents and three beta-lactam-beta-lactamase inhibitor combinations were tested by the disk diffusion method against 50 E. coli strains with well-characterized resistance mechanisms. The strains were screened for the production of extended-spectrum beta-lactamase (ESBL) by the double-disk synergy test using a disk of amoxicillin-clavulanic acid with disks of the extended-spectrum cephalosporins and aztreonam. Overall, the EES accurately identified the phenotype for 78% of the strains, indicated an inexact phenotype for 17% of the strains, and could not find a matching phenotype for the remaining 5% of the strains. The percentage of correct identification for each resistance mechanism was 100% for inhibitor-resistant TEM and for TEM plus cephalosporinase, 88.9% for TEM and for ESBL, 70.8% for cephalosporinase overproduction, and 25% for oxacillinase. The main cause of discrepancy was the misidentification of oxacillinase as inhibitor-resistant TEM. The conventional double-disk synergy test failed to detect ESBL production in two strains (one producing VEB-1 and one producing CTX-M-14), but synergy between cefepime and amoxicillin-clavulanic acid was visible after the distance between the disks was reduced to 20 mm. After the interpretative guidelines of the EES were updated according to our results, the percentage of correct phenotype identification increased from 78 to 96%.
Osiris is a video zone size reader for disk diffusion tests that includes a built-in extended expert system (EES). We evaluated the efficacy of the Osiris EES for the identification of β-lactam susceptibility phenotypes of Escherichia coli isolates. Fifteen β-lactam agents and three β-lactam-β-lactamase inhibitor combinations were tested by the disk diffusion method against 50 E. coli strains with well-characterized resistance mechanisms. The strains were screened for the production of extended-spectrum β-lactamase (ESBL) by the double-disk synergy test using a disk of amoxicillin-clavulanic acid with disks of the extended-spectrum cephalosporins and aztreonam. Overall, the EES accurately identified the phenotype for 78% of the strains, indicated an inexact phenotype for 17% of the strains, and could not find a matching phenotype for the remaining 5% of the strains. The percentage of correct identification for each resistance mechanism was 100% for inhibitor-resistant TEM and for TEM plus cephalosporinase, 88.9% for TEM and for ESBL, 70.8% for cephalosporinase overproduction, and 25% for oxacillinase. The main cause of discrepancy was the misidentification of oxacillinase as inhibitor-resistant TEM. The conventional double-disk synergy test failed to detect ESBL production in two strains (one producing VEB-1 and one producing CTX-M-14), but synergy between cefepime and amoxicillin-clavulanic acid was visible after the distance between the disks was reduced to 20 mm. After the interpretative guidelines of the EES were updated according to our results, the percentage of correct phenotype identification increased from 78 to 96%.
Author Gervais Clarebout
Nicole Lambert
Manette Juvin
Emmanuelle Keller
Guillaume Arlet
Zahia Ould-Hocine
Frédéric Bert
AuthorAffiliation Service de Microbiologie, Hôpital Beaujon, Clichy, 1 Bio-Rad, Marnes-la-Coquette, 2 Service de Microbiologie, Hôpital Tenon, Paris, France 3
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Corresponding author. Mailing address: Service de Microbiologie, Hôpital Beaujon, 100 boulevard du Général Leclerc, 92110 Clichy, France. Phone: 33 1 40 87 54 42. Fax: 33 1 40 87 05 50. E-mail: frederic.bert@bjn.ap-hop-paris.fr.
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Snippet Article Usage Stats Services JCM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley...
Osiris is a video zone size reader for disk diffusion tests that includes a built-in extended expert system (EES). We evaluated the efficacy of the Osiris EES...
ABSTRACT Osiris is a video zone size reader for disk diffusion tests that includes a built-in extended expert system (EES). We evaluated the efficacy of the...
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SubjectTerms Anti-Bacterial Agents - pharmacology
Bacteriology
beta-Lactam Resistance
beta-Lactamases - genetics
beta-Lactamases - metabolism
beta-Lactams - pharmacology
Biological and medical sciences
Escherichia coli
Escherichia coli - classification
Escherichia coli - drug effects
Fundamental and applied biological sciences. Psychology
Genotype
Humans
Infectious diseases
Medical sciences
Microbial Sensitivity Tests - instrumentation
Microbial Sensitivity Tests - methods
Microbiology
Miscellaneous
Phenotype
Video Recording - instrumentation
Video Recording - methods
Title Evaluation and Updating of the Osiris Expert System for Identification of Escherichia coli β-Lactam Resistance Phenotypes
URI http://jcm.asm.org/content/43/4/1846.abstract
https://www.ncbi.nlm.nih.gov/pubmed/15815007
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https://pubmed.ncbi.nlm.nih.gov/PMC1081361
Volume 43
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